RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000221866

Ensembl transcript IDs: ENST00000321063.8, ENST00000359827.7, ENST00000378539.5, ENST00000423507.6

Found 1610 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCATGGGGGAGGTGGAGATGCTGGGCCAGTACATCAACCTTCACTaGTGGTGGGCGCAGGTAGCTGGGCCTGAGGGGACCAGGTCAGAG +
Preference number: 1 (lower is better)
Translates to: CMGEVEMLGQYINLH*WWAQVAGPEGTRSE
Trigger: CTCTGACCTGGTCCCCTCAGGCCCAGCTACCTGCGCCCACCAGCAGTGAAGGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp TCGCCCTGGGACAGAGGCTATGTGTGCAGGAGAGACACGGTGGAATaGGGAGGGACAGGGAGGATGCTCGTGGCAGGAGGAGCACAGGCA +
Preference number: 1 (lower is better)
Translates to: SPWDRGYVCRRDTVE*GGTGRMLVAGGAQA
Trigger: TGCCTGTGCTCCTCCTGCCACGAGCATCCTCCCTGTCCCTCCTCATTCCACCGTGTCTCTCCTGCACACATAGCCTCTGTCCCAGGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp CATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTaGTTTCCTATGGACAAGCGCCCTCTCCTTCCACCCACCAGCTCT +
Preference number: 1 (lower is better)
Translates to: HDALFQGPGLGRRPP*FPMDKRPLLPPTSS
Trigger: AGAGCTGGTGGGTGGAAGGAGAGGGCGCTTGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp GCAGGACCCTGCTGGAAGAGATGGGCTGGCCCCTACATGCTAAAGTaGGGAGGAGGGCAGTGGCATCCAATCCTTCCTTCCCACCTCAGG +
Preference number: 1 (lower is better)
Translates to: AGPCWKRWAGPYMLK*GGGQWHPILPSHLR
Trigger: CCTGAGGTGGGAAGGAAGGATTGGATGCCACTGCCCTCCTCCCCACTTTAGCATGTAGGGGCCAGCCCATCTCTTCCAGCAGGGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp CAGGCAGAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTaGTTGCATGGGGGAGGTGGAGATGCTGGGCCAGTACATCAACCT +
Preference number: 1 (lower is better)
Translates to: QAEARHATGDTVPGT*LHGGGGDAGPVHQP
Trigger: AGGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp CAGGCCCATCAGCTCGACTCTTTGTCCCTCCCAGATCTGACAAGCTaGAGGCTGAGGTTGGCTGGCATTTTGGGCTGTCTCCGTGAGGCT +
Preference number: 1 (lower is better)
Translates to: QAHQLDSLSLPDLTS*RLRLAGILGCLREA
Trigger: AGCCTCACGGAGACAGCCCAAAATGCCAGCCAACCTCAGCCTCCAGCTTGTCAGATCTGGGAGGGACAAAGAGTCGAGCTGATGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp TACCAGGCTGCGGGTGCACAAGGGGTAGGCTTTAGGGGCTGGCTTTaGGTGCAGGGATCATGCTGCCATTGGAATGTACCTTGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: YQAAGAQGVGFRGWL*VQGSCCHWNVPWPV
Trigger: CACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTACCCCTTGTGCACCCGCAGCCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp AGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATaGGGGAGGTGGAGATGCTGGGCCAGTACATCAACCTTCACTGCT +
Preference number: 1 (lower is better)
Translates to: SQTCNGRHGTRDLVA*GRWRCWASTSTFTA
Trigger: AGCAGTGAAGGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp GGAAGTCATTGCTTGTGGATCCTCGGATGGGGACCCATAGGGCCTTaGCTAGACGAGGGAGCTCCTACAGCCAGGAAGGCAGCTTTGGGT +
Preference number: 1 (lower is better)
Translates to: GSHCLWILGWGPIGP*LDEGAPTARKAALG
Trigger: ACCCAAAGCTGCCTTCCTGGCTGTAGGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp CTGTTCCTGGAAGGAGCAGGGGAAGTTCCCGGAGAGGGGCTTCTCTaGGCCTTGTGCCTGCAGAGCACCTTCCTACCTATGTCTGTCTGT +
Preference number: 1 (lower is better)
Translates to: LFLEGAGEVPGEGLL*ALCLQSTFLPMSVC
Trigger: ACAGACAGACATAGGTAGGAAGGTGCTCTGCAGGCACAAGGCCCAGAGAAGCCCCTCTCCGGGAACTTCCCCTGCTCCTTCCAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp AGGTTGCTCATGTCTTTTCCACCATCTGTCCTCTGCGATGTCACATaGTGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTG +
Preference number: 1 (lower is better)
Translates to: RLLMSFPPSVLCDVT*CPVPRSRPRQATTL
Trigger: CAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCATGTGACATCGCAGAGGACAGATGGTGGAAAAGACATGAGCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp GGCTCGCTGAGCCATTGTCTGTTGTGGTACCCTGGAGTTGCTGGTTaGTATGGTAACTCAGCAGGACCCTGCTGGAAGAGATGGGCTGGC +
Preference number: 1 (lower is better)
Translates to: GSLSHCLLWYPGVAG*YGNSAGPCWKRWAG
Trigger: GCCAGCCCATCTCTTCCAGCAGGGTCCTGCTGAGTTACCATAGCAACCAGCAACTCCAGGGTACCACAACAGACAATGGCTCAGCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp GGAGCATCTCCATGGTGGAATGTAATTGCTATTCTTTCTCCTGCCTaGCTTTCTACTGGCGGGGGAGCAGGCAGGGCAGGCAGGTCCCTC +
Preference number: 1 (lower is better)
Translates to: GASPWWNVIAILSPA*LSTGGGAGRAGRSL
Trigger: GAGGGACCTGCCTGCCCTGCCTGCTCCCCCGCCAGTAGAAAGCCAGGCAGGAGAAAGAATAGCAATTACATTCCACCATGGAGATGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp CTCACTTACCAGGCTGCGGGTGCACAAGGGGTAGGCTTTAGGGGCTaGCTTTGGGTGCAGGGATCATGCTGCCATTGGAATGTACCTTGG +
Preference number: 1 (lower is better)
Translates to: LTYQAAGAQGVGFRG*LWVQGSCCHWNVPW
Trigger: CCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTACCCCTTGTGCACCCGCAGCCTGGTAAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp TGCAGTGGAGGTCATTTGGGAAGTCATTGCTTGTGGATCCTCGGATaGGGACCCATAGGGCCTTGGCTAGACGAGGGAGCTCCTACAGCC +
Preference number: 1 (lower is better)
Translates to: CSGGHLGSHCLWILG*GPIGPWLDEGAPTA
Trigger: GGCTGTAGGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp AGGTGGCAGGAGGCGGTAGGAGAAGGACTCCATCTGTCAAAAGTGTaGGGAAGCACCAGGAATAGCAGCAGCCATGTGAGATGCCACCCC +
Preference number: 1 (lower is better)
Translates to: RWQEAVGEGLHLSKV*GSTRNSSSHVRCHP
Trigger: GGGGTGGCATCTCACATGGCTGCTGCTATTCCTGGTGCTTCCCCACACTTTTGACAGATGGAGTCCTTCTCCTACCGCCTCCTGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp TACCCTGGAGTTGCTGGTTGCTATGGTAACTCAGCAGGACCCTGCTaGAAGAGATGGGCTGGCCCCTACATGCTAAAGTGGGGAGGAGGG +
Preference number: 1 (lower is better)
Translates to: YPGVAGCYGNSAGPC*KRWAGPYMLKWGGG
Trigger: CCCTCCTCCCCACTTTAGCATGTAGGGGCCAGCCCATCTCTTCCAGCAGGGTCCTGCTGAGTTACCATAGCAACCAGCAACTCCAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp CCTGCATCATCCCCACACGTCGGCTCGCTGAGCCATTGTCTGTTGTaGTACCCTGGAGTTGCTGGTTGCTATGGTAACTCAGCAGGACCC +
Preference number: 1 (lower is better)
Translates to: PASSPHVGSLSHCLL*YPGVAGCYGNSAGP
Trigger: GGGTCCTGCTGAGTTACCATAGCAACCAGCAACTCCAGGGTACCACAACAGACAATGGCTCAGCGAGCCGACGTGTGGGGATGATGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp CTAGGCCAAGGCTCAGACCAAAGCAGGGGCTGCCAAAGTGGAAGGTaGAGTAGCAGCACAGAAATGTCCCCTGTCCCTGGCTCCTCATTC +
Preference number: 1 (lower is better)
Translates to: LGQGSDQSRGCQSGR*SSSTEMSPVPGSSF
Trigger: GAATGAGGAGCCAGGGACAGGGGACATTTCTGTGCTGCTACTTCACCTTCCACTTTGGCAGCCCCTGCTTTGGTCTGAGCCTTGGCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp GTCAGGAGCATCTCCATGGTGGAATGTAATTGCTATTCTTTCTCCTaGCTGGCTTTCTACTGGCGGGGGAGCAGGCAGGGCAGGCAGGTC +
Preference number: 1 (lower is better)
Translates to: VRSISMVECNCYSFS*LAFYWRGSRQGRQV
Trigger: GACCTGCCTGCCCTGCCTGCTCCCCCGCCAGTAGAAAGCCAGGCAGGAGAAAGAATAGCAATTACATTCCACCATGGAGATGCTCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp CCTGCTCCAGCCACATGCAGGAGGTGTAGCCTTTCTTCTCACAGCTaGAAAGCGATCAGACCACTGGCTGAACCACTGGAGATGGAACTG +
Preference number: 1 (lower is better)
Translates to: PAPATCRRCSLSSHS*KAIRPLAEPLEMEL
Trigger: CAGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAGGCTACACCTCCTGCATGTGGCTGGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp CAAGGGGTAGGCTTTAGGGGCTGGCTTTGGGTGCAGGGATCATGCTaGCATTGGAATGTACCTTGGCCTGTGGGACACTTGGGTTATCCA +
Preference number: 1 (lower is better)
Translates to: QGVGFRGWLWVQGSC*HWNVPWPVGHLGYP
Trigger: TGGATAACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTACCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp GCACAAGGGGTAGGCTTTAGGGGCTGGCTTTGGGTGCAGGGATCATaGTGCCATTGGAATGTACCTTGGCCTGTGGGACACTTGGGTTAT +
Preference number: 1 (lower is better)
Translates to: AQGVGFRGWLWVQGS*CHWNVPWPVGHLGY
Trigger: ATAACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTACCCCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp GGGCCTGAGGGGACCAGGTCAGAGACTTTTCCTGTGGGTAACTCCTaGTTCTTCCTGGGAACAGTCCTGGACAGTCTGCCTCAAACTTTG +
Preference number: 1 (lower is better)
Translates to: GPEGTRSETFPVGNS*FFLGTVLDSLPQTL
Trigger: CAAAGTTTGAGGCAGACTGTCCAGGACTGTTCCCAGGAAGAAGCAGGAGTTACCCACAGGAAAAGTCTCTGACCTGGTCCCCTCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp GGAGGTGTAGCCTTTCTTCTCACAGCTGCAAAGCGATCAGACCACTaGCTGAACCACTGGAGATGGAACTGTGGGAAGGGAGAGCCAGGT +
Preference number: 1 (lower is better)
Translates to: GGVAFLLTAAKRSDH*LNHWRWNCGKGEPG
Trigger: ACCTGGCTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAGGCTACACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp GGGGCAGCCCAGAGAGCCAAGCATAGACATCAAAGCGGGTGGGAATaGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCT +
Preference number: 1 (lower is better)
Translates to: GAAQRAKHRHQSGWE*NKVRLPQPRIFSLP
Trigger: AGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCACCCGCTTTGATGTCTATGCTTGGCTCTCTGGGCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp GTACCAGGGGCAGCCCAGAGAGCCAAGCATAGACATCAAAGCGGGTaGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGC +
Preference number: 1 (lower is better)
Translates to: VPGAAQRAKHRHQSG*EWNKVRLPQPRIFS
Trigger: GCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCACCCGCTTTGATGTCTATGCTTGGCTCTCTGGGCTGCCCCTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp CTCACAGCTGCAAAGCGATCAGACCACTGGCTGAACCACTGGAGATaGAACTGTGGGAAGGGAGAGCCAGGTGATGTCTTCCCAGTAAAG +
Preference number: 1 (lower is better)
Translates to: LTAAKRSDHWLNHWR*NCGKGEPGDVFPVK
Trigger: CTTTACTGGGAAGACATCACCTGGCTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTTTGCAGCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp TTTCCCGCAGAGGCTGGGATGGTTCTGAGCACTGAGTTAATTACATaGTGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATG +
Preference number: 1 (lower is better)
Translates to: FPAEAGMVLSTELIT*CCSTVGSILSALCM
Trigger: CATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATCATGTAATTAACTCAGTGCTCAGAACCATCCCAGCCTCTGCGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 90 bp AAGGATTCTTCTTGCAGTGGAGGTCATTTGGGAAGTCATTGCTTGTaGATCCTCGGATGGGGACCCATAGGGCCTTGGCTAGACGAGGGA +
Preference number: 1 (lower is better)
Translates to: KDSSCSGGHLGSHCL*ILGWGPIGPWLDEG
Trigger: TCCCTCGTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp GAGGACAGACAGATGAGCACGTGTATCCCATCTTCGTCCTGTGCCTaGATTGCGGCTGACTTCTGTGCACGAAAGTGTTCCTTAGTCCTG +
Preference number: 1 (lower is better)
Translates to: EDRQMSTCIPSSSCA*IAADFCARKCSLVL
Trigger: CAGGACTAAGGAACACTTTCGTGCACAGAAGTCAGCCGCAATCCAGGCACAGGACGAAGATGGGATACACGTGCTCATCTGTCTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp GGAACAGAGATAACCTGCCCTACCTCCTTCAACGGCTTCTCTATGTaGCTCAAAGACCCCTGCCGGTTCCTTAAACCACCCTTCCATCCT +
Preference number: 1 (lower is better)
Translates to: GTEITCPTSFNGFSM*LKDPCRFLKPPFHP
Trigger: AGGATGGAAGGGTGGTTTAAGGAACCGGCAGGGGTCTTTGAGTCACATAGAGAAGCCGTTGAAGGAGGTAGGGCAGGTTATCTCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp AGTGGTAAGGATTCTTCTTGCAGTGGAGGTCATTTGGGAAGTCATTaGTTGTGGATCCTCGGATGGGGACCCATAGGGCCTTGGCTAGAC +
Preference number: 1 (lower is better)
Translates to: SGKDSSCSGGHLGSH*LWILGWGPIGPWLD
Trigger: GTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATCCTTACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp CCTGCAGAGCACCTTCCTACCTATGTCTGTCTGTCTTTCCCTCACTaGTTGGCTGTCTGTGAGGTGGGAGGTTTGTCCTTGACTGATAAC +
Preference number: 1 (lower is better)
Translates to: PAEHLPTYVCLSFPH*LAVCEVGGLSLTDN
Trigger: GTTATCAGTCAAGGACAAACCTCCCACCTCACAGACAGCCAAGCAGTGAGGGAAAGACAGACAGACATAGGTAGGAAGGTGCTCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp TGGAAGAAGAGCTGCATAGACCAAGTCTACTTGCTTTTGCAATCCTaGCGGAGGGAAAGCTTGGGTCTTCCCATGACCCATCCCTCACAG +
Preference number: 1 (lower is better)
Translates to: WKKSCIDQVYLLLQS*RRESLGLPMTHPSQ
Trigger: CTGTGAGGGATGGGTCATGGGAAGACCCAAGCTTTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTTGGTCTATGCAGCTCTTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp CTGGCTGAACCACTGGAGATGGAACTGTGGGAAGGGAGAGCCAGGTaGTGTCTTCCCAGTAAAGATAATACTGAAGTCCTTCCTTGCCTC +
Preference number: 1 (lower is better)
Translates to: LAEPLEMELWEGRAR*CLPSKDNTEVLPCL
Trigger: GAGGCAAGGAAGGACTTCAGTATTATCTTTACTGGGAAGACATCACCTGGCTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp AGAGAGCCAAGCATAGACATCAAAGCGGGTGGGAATGGAATAAAGTaGGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCACCTC +
Preference number: 1 (lower is better)
Translates to: REPSIDIKAGGNGIK*GSRNPGFSAYLNHL
Trigger: GAGGTGATTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCACCCGCTTTGATGTCTATGCTTGGCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp TTGGGTGCTCTCCTGGACCAGATGCCAACAGAGCTTTTGCACATATaGTCAGCTCATCAGGCACTGTTGGCTTCCTTTTCTCTTTCCCGC +
Preference number: 1 (lower is better)
Translates to: LGALLDQMPTELLHI*SAHQALLASFSLSR
Trigger: GCGGGAAAGAGAAAAGGAAGCCAACAGTGCCTGATGAGCTGATCATATGTGCAAAAGCTCTGTTGGCATCTGGTCCAGGAGAGCACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR GCA 90 bp AAATCATTCCCAAAGAGGTCTGGACAGCCCAGTGACAAAGTCATCTaGATAGCAATGGCACCGGATTCTGCAGAGGGAACAGGGACTAGG +
Preference number: 1 (lower is better)
Translates to: KSFPKRSGQPSDKVI*IAMAPDSAEGTGTR
Trigger: CCTAGTCCCTGTTCCCTCTGCAGAATCCGGTGCCATTGCTATGCAGATGACTTTGTCACTGGGCTGTCCAGACCTCTTTGGGAATGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp ACACACACACACACACACACTGGCCAGGCGACTTGGCTGCAGAAGTaGACAGATGAGCATAAGGTTATCCTACCATATATCAGGCCCAAG +
Preference number: 1 (lower is better)
Translates to: THTHTHTGQATWLQK*TDEHKVILPYIRPK
Trigger: CTTGGGCCTGATATATGGTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 90 bp TCAAGAGCCCTCCTGATTCATTCCCTCCCACAGGCCAGGAACCTGTaGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: SRALLIHSLPQARNL*HTLKRITLLCILQE
Trigger: TTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGGTTCCTGGCCTGTGGGAGGGAATGAATCAGGAGGGCTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR TCA 90 bp GGCAGAGAGAAAGAGAGAGAAACAGCGCTGCTCAGGGGATGCTGCTaGTGCCAGTCGGAACTTGCACTTGGTAAAGATGATAATCTAGAC +
Preference number: 1 (lower is better)
Translates to: GREKERETALLRGCC*CQSELALGKDDNLD
Trigger: GTCTAGATTATCATCTTTACCAAGTGCAAGTTCCGACTGGCATCAGCAGCATCCCCTGAGCAGCGCTGTTTCTCTCTCTTTCTCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp GCTTTCCGCCTACACCTGGGGCAGACACACACACACACATACATGTaGTCACACACATGTGCACATATTCATATCCAAAGGGGCAAGTGT +
Preference number: 1 (lower is better)
Translates to: AFRLHLGQTHTHTYM*SHTCAHIHIQRGKC
Trigger: ACACTTGCCCCTTTGGATATGAATATGTGCACATGTGTGTGAGCACATGTATGTGTGTGTGTGTGTCTGCCCCAGGTGTAGGCGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp CACAGCATCGTTCACGGCTCTGGAAACAGTGGTAAGGATTCTTCTTaGAGTGGAGGTCATTTGGGAAGTCATTGCTTGTGGATCCTCGGA +
Preference number: 1 (lower is better)
Translates to: HSIVHGSGNSGKDSS*SGGHLGSHCLWILG
Trigger: TCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATCCTTACCACTGTTTCCAGAGCCGTGAACGATGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp ACAAACCTCTGCCTCCAGAATATGGACAGTGAGACACAGAGGGGTTaGCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTG +
Preference number: 1 (lower is better)
Translates to: TNLCLQNMDSETQRG*LLSLNLQLWDSLSV
Trigger: CACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTCTCACTGTCCATATTCTGGAGGCAGAGGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 90 bp GGCTGGCTTTGGGTGCAGGGATCATGCTGCCATTGGAATGTACCTTaGCCTGTGGGACACTTGGGTTATCCACTGTTCCCAAATTTAAAA +
Preference number: 1 (lower is better)
Translates to: GWLWVQGSCCHWNVP*PVGHLGYPLFPNLK
Trigger: TTTTAAATTTGGGAACAGTGGATAACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp ACACACACACACACACACACACACACACACACTGGCCAGGCGACTTaGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACCATAT +
Preference number: 1 (lower is better)
Translates to: THTHTHTHTHTGQAT*LQKWTDEHKVILPY
Trigger: ATATGGTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR TCA 90 bp CTTTGTTCTAACAAAGGGTCAATGTTCGAGGTGGGAGCTTTAGTTTaGAACAGAAGTGGGATGGGGCTGGAAGGGGGTGACTGGAACAGA +
Preference number: 1 (lower is better)
Translates to: LCSNKGSMFEVGALV*NRSGMGLEGGDWNR
Trigger: TCTGTTCCAGTCACCCCCTTCCAGCCCCATCCCACTTCTGTTTCAAACTAAAGCTCCCACCTCGAACATTGACCCTTTGTTAGAACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp GCAGGAGTGTTGGACCAGTTAGAATTCCCAACAGCCATGCTTCAATaGACACAGAGCCAGTTTCACATGGAACTCCTGGGACGTATTTCT +
Preference number: 1 (lower is better)
Translates to: AGVLDQLEFPTAMLQ*TQSQFHMELLGRIS
Trigger: AGAAATACGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGTTGGGAATTCTAACTGGTCCAACACTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 90 bp CTCCTACAAAGGACAAGAAATCCTTTTGAGCTTTCCGCCTACACCTaGGGCAGACACACACACACACATACATGTGCTCACACACATGTG +
Preference number: 1 (lower is better)
Translates to: LLQRTRNPFELSAYT*GRHTHTHTCAHTHV
Trigger: CACATGTGTGTGAGCACATGTATGTGTGTGTGTGTGTCTGCCCCAGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTCCTTTGTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp CAAACAGCAGAAGATAATTTTTATAAGCAAGATGGGCTGTGGCTCTaGATACCTGGCTCAAATTTCTCAGTCCCCAAGCAGGCCACGGGG +
Preference number: 1 (lower is better)
Translates to: QTAEDNFYKQDGLWL*IPGSNFSVPKQATG
Trigger: CCCCGTGGCCTGCTTGGGGACTGAGAAATTTGAGCCAGGTATCCAGAGCCACAGCCCATCTTGCTTATAAAAATTATCTTCTGCTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 90 bp CTTTCCCTCACTGCTTGGCTGTCTGTGAGGTGGGAGGTTTGTCCTTaGCTGATAACAATACTGGCCCTTTGCTCGGTTAAGTATTTGACT +
Preference number: 1 (lower is better)
Translates to: LSLTAWLSVRWEVCP*LITILALCSVKYLT
Trigger: AGTCAAATACTTAACCGAGCAAAGGGCCAGTATTGTTATCAGTCAAGGACAAACCTCCCACCTCACAGACAGCCAAGCAGTGAGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp CTAAAATCGTGCATCTGTAGATGTAAGAACAGATGGGGAGATGGATaGCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAATTCCAGC +
Preference number: 1 (lower is better)
Translates to: LKSCICRCKNRWGDG*QGQGHLYVPLLNSS
Trigger: GCTGGAATTAAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTTCTTACATCTACAGATGCACGATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp TCCTCTTCCAATGCATTGTTTCCCATTTTCCTCTTCCCATTAGGTTaGTCATGTCTTTTCCACCATCTGTCCTCTGCGATGTCACATGAT +
Preference number: 1 (lower is better)
Translates to: SSSNALFPIFLFPLG*SCLFHHLSSAMSHD
Trigger: ATCATGTGACATCGCAGAGGACAGATGGTGGAAAAGACATGAGCAACCTAATGGGAAGAGGAAAATGGGAAACAATGCATTGGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 90 bp GTGTTAAATACGTTTGTGTCTCTTTCCTCCCCAACCCTTTATATGTaGAAAAATATTGTAGTGACCGAGGTACTTCCTCAGACCGTCTCC +
Preference number: 1 (lower is better)
Translates to: VLNTFVSLSSPTLYM*KNIVVTEVLPQTVS
Trigger: GGAGACGGTCTGAGGAAGTACCTCGGTCACTACAATATTTTTGCACATATAAAGGGTTGGGGAGGAAAGAGACACAAACGTATTTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 90 bp AATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTaGTGGTTCTTAGCAACAGAACAAATCTACAGCACTTTCACTTGT +
Preference number: 1 (lower is better)
Translates to: NYTVVYPPGTIRGLV*WFLATEQIYSTFTC
Trigger: ACAAGTGAAAGTGCTGTAGATTTGTTCTGTTGCTAAGAACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 90 bp GGTTATCCTACCATATATCAGGCCCAAGAGATAACTATATTCCGATaGGAGAATCAGTTAGTTTCACTGACATATACAAGTGATAACACC +
Preference number: 1 (lower is better)
Translates to: GYPTIYQAQEITIFR*ENQLVSLTYTSDNT
Trigger: GGTGTTATCACTTGTATATGTCAGTGAAACTAACTGATTCTCCCATCGGAATATAGTTATCTCTTGGGCCTGATATATGGTAGGATAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 90 bp GGGAAGTCATTGCTTGTGGATCCTCGGATGGGGACCCATAGGGCCTaGGCTAGACGAGGGAGCTCCTACAGCCAGGAAGGCAGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: GKSLLVDPRMGTHRA*ARRGSSYSQEGSFG
Trigger: CCCAAAGCTGCCTTCCTGGCTGTAGGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp GGGTCAGGTGAGCTCCTGGAGGTGACTCAGTCATGGAAAGACCCCTaGAAGGCCTTGAAGAGCTGGCTGGGGCTGCTCACTGGGCTCACT +
Preference number: 2 (lower is better)
Translates to: GSGELLEVTQSWKDP*KALKSWLGLLTGLT
Trigger: AGTGAGCCCAGTGAGCAGCCCCAGCCAGCTCTTCAAGGCCTTCAAGGGGTCTTTCCATGACTGAGTCACCTCCAGGAGCTCACCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACTCAGGGGATGCTGCTaGTGCCAGTCGGAACTTGCA +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTLRGCC*CQSELA
Trigger: TGCAAGTTCCGACTGGCATCAGCAGCATCCCCTGAG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGCAGGCAGGTCCCTCTaGAGACCTGGAAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTAGRSL*RPGKGQ
Trigger: CTGTCCTTTTCCAGGTCTCCAGAGGGACCTGCCTGC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACCAGATCTGACAAGCTaGAGGCTGAGGTTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGPDLTS*RLRLAG
Trigger: GCCAGCCAACCTCAGCCTCCAGCTTGTCAGATCTGG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGCCCGCAAGCCACATaGACAGCCCCTGGATGTTTG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSPQAT*TAPGCL
Trigger: CAAACATCCAGGGGCTGTCCATGTGGCTTGCGGGCT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp GCAGAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTaGCATGGGGGAGGTGGAGATGCTGGGCCAGTACATCAACCTTCA +
Preference number: 2 (lower is better)
Translates to: AEARHATGDTVPGTW*HGGGGDAGPVHQPS
Trigger: TGAAGGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp CTGGAAGGAGCAGGGGAAGTTCCCGGAGAGGGGCTTCTCTGGGCCTaGTGCCTGCAGAGCACCTTCCTACCTATGTCTGTCTGTCTTTCC +
Preference number: 2 (lower is better)
Translates to: LEGAGEVPGEGLLWA*CLQSTFLPMSVCLS
Trigger: GGAAAGACAGACAGACATAGGTAGGAAGGTGCTCTGCAGGCACAAGGCCCAGAGAAGCCCCTCTCCGGGAACTTCCCCTGCTCCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCTGGTCAGCTCCCTTaGCATGGGCCTGGCCATTCT +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSGQLP*HGPGHS
Trigger: AGAATGGCCAGGCCCATGGCAAGGGAGCTGACCAGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGTCCCTCTGGAGACCTaGAAAAGGACAGGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTVPLET*KRTGSL
Trigger: GAGGCTTCCTGTCCTTTTCCAGGTCTCCAGAGGGAC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACACATGGACAGCCCCTaGATGTTTGCTCTGCCAGTG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGHMDSP*MFALPV
Trigger: CACTGGCAGAGCAAACATCCAGGGGCTGTCCATGTG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGCAGGCGACCACCCTaGTTTCCTATGGACAAGCGC +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGRRPP*FPMDKR
Trigger: GCGCTTGTCCATAGGAAATCAGGGTGGTCGCCTGCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAACTCCAGAGCAGAGGTaGCAACAGAGACTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTTPEQR*QQRLLL
Trigger: AAGCAGGAGTCTCTGTTGGCACCTCTGCTCTGGAGT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGCCCCCTTCTTCCCTaGTACCTTAAGCCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSPLLP*YLKPFS
Trigger: AGAGAAGGGCTTAAGGTAGCAGGGAAGAAGGGGGCT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTGAACCACTGGAGATaGAACTGTGGGAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLNHWR*NCGKGE
Trigger: CTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACACTGGCTGAACCACTaGAGATGGAACTGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGHWLNH*RWNCGK
Trigger: CTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCAGGGACTAGGCTGTTaGCCCCAGCCGTCTATGGAG +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHQGLGC*PQPSME
Trigger: CTCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGAACAGATGGGGAGATaGATGCCAAGGCCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTEQMGR*MPRPRS
Trigger: TGACCTTGGCCTTGGCATCCATCTCCCCATCTGTTC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATGTTTGCTCTGCCAGTaGGGTAAGGAAGATCCCTGG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGCLLCQ*GKEDPW
Trigger: CCAGGGATCTTCCTTACCCCACTGGCAGAGCAAACA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp GCAGTGGCATCCAATCCTTCCTTCCCACCTCAGGGCCTGGAGGCCTaGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGT +
Preference number: 2 (lower is better)
Translates to: AVASNPSFPPQGLEA*FLLKAANTRLSKDR
Trigger: ACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTCCAGGCCCTGAGGTGGGAAGGAAGGATTGGATGCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp ACCCCTGCATCATCCCCACACGTCGGCTCGCTGAGCCATTGTCTGTaGTGGTACCCTGGAGTTGCTGGTTGCTATGGTAACTCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TPASSPHVGSLSHCL*WYPGVAGCYGNSAG
Trigger: TCCTGCTGAGTTACCATAGCAACCAGCAACTCCAGGGTACCACAACAGACAATGGCTCAGCGAGCCGACGTGTGGGGATGATGCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGATCAGACCACTGGCTaGACCACTGGAGATGGAACT +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLDQTTG*TTGDGT
Trigger: AGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGAGAGAAACAGCGCTaGTCAGGGGATGCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLREKQR*SGDAAD
Trigger: ATCAGCAGCATCCCCTGAGCAGCGCTGTTTCTCTCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAACTCCAGAGCAGAGGTaGCAACAGAGACTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLTPEQR*QQRLLL
Trigger: AAGCAGGAGTCTCTGTTGGCACCTCTGCTCTGGAGT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATGCCTGGCTTTCTACTaGCGGGGGAGCAGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPECLAFY*RGSRQG
Trigger: GCCCTGCCTGCTCCCCCGCCAGTAGAAAGCCAGGCA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCAGATCTGACAAGCTaGAGGCTGAGGTTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPDLTS*RLRLAG
Trigger: GCCAGCCAACCTCAGCCTCCAGCTTGTCAGATCTGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGTACCGGATGCTCCATaGACTTTGCTGGAAATGGTG +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTVPDAP*TLLEMV
Trigger: CACCATTTCCAGCAAAGTCCATGGAGCATCCGGTAC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAATGTACCTTGGCCTGTaGGACACTTGGGTTATCCAC +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGMYLGL*DTWVIH
Trigger: GTGGATAACCCAAGTGTCCCACAGGCCAAGGTACAT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTACTGGCCAGGCGACTTaGCTGCAGAAGTGGACAGAT +
Preference number: 2 (lower is better)
Translates to: CCSTVGSILSALCMHTHLTGQAT*LQKWTD
Trigger: ATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAGT...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGACAGAGGCCTCTCTaGCATCTTCTGGTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRQRPL*HLLVSS
Trigger: GGAGCTGACCAGAAGATGTCAGAGAGGCCTCTGTCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTCTGCATTTCACGTTaGCCCTTGATGAAGGTTGAC +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLCISR*PLMKVD
Trigger: GTCAACCTTCATCAAGGGTCAACGTGAAATGCAGAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGACAAGAAATCCTTTTaGGCTTTCCGCCTACACCTG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGDKKSF*AFRLHL
Trigger: CAGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCTCGAGGGAGGCCGTaGAGGGGCCTCCATCCCACA +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPRGRP*RGLHPT
Trigger: TGTGGGATGGAGGCCCCTTCACGGCCTCCCTCGAGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCCTCATTCGTTATTTaGACCCTGCTGCTGACATGC +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSSFVI*TLLLTC
Trigger: GCATGTCAGCAGCAGGGTGCAAATAACGAATGAGGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTTTCTTCTCACAGCTaGAAAGCGATCAGACCACTG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLSSHS*KAIRPL
Trigger: CAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCTGCTCCAGCCACATaGAGGAGGTGTAGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPAPAT*RRCSLS
Trigger: AGAAAGGCTACACCTCCTGCATGTGGCTGGAGCAGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGCTATTCTTTCTCCTaGCTGGCTTTCTACTGGCGG +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLCYSFS*LAFYWR
Trigger: CCGCCAGTAGAAAGCCAGGCAGGAGAAAGAATAGCA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCTCACTTACCAGGCTaGGGGTGCACAAGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMAHLPG*GCTRGR
Trigger: CCTACCCCTTGTGCACCCGCAGCCTGGTAAGTGAGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGCCTGGCTTTCTACTaGCGGGGGAGCAGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLCLAFY*RGSRQG
Trigger: GCCCTGCCTGCTCCCCCGCCAGTAGAAAGCCAGGCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGTACCGGATGCTCCATaGACTTTGCTGGAAATGGTG +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLVPDAP*TLLEMV
Trigger: CACCATTTCCAGCAAAGTCCATGGAGCATCCGGTAC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATTTGATGGCTCAGTCTaGTACCATTTTCCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGFDGSV*YHFPWE
Trigger: CTCCCAGGGAAAATGGTACCAGACTGAGCCATCAAA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACAGAGACTTTTCCTGTaGGTAACTCCTGCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGQRLFL*VTPASS
Trigger: GGAAGAAGCAGGAGTTACCCACAGGAAAAGTCTCTG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCTGGGGCTGCTCACTaGGCTCACTGTTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMAGAAH*AHCSWK
Trigger: CTTCCAGGAACAGTGAGCCCAGTGAGCAGCCCCAGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp GTTTCCTGTCAAGAGCATGCCACCCTTAGCACCATGAGGAGAGGTTaGCAGAGTGTCCCAGCCTCATTCGGGAGCTGTGTCAGTGTTACC +
Preference number: 2 (lower is better)
Translates to: VSCQEHATLSTMRRG*QSVPASFGSCVSVT
Trigger: GGTAACACTGACACAGCTCCCGAATGAGGCTGGGACACTCTGCAAACCTCTCCTCATGGTGCTAAGGGTGGCATGCTCTTGACAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTACTAGGATTCAGATaGAAAGGTCAGGAGCATCTC +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLLGFR*KGQEHL
Trigger: GAGATGCTCCTGACCTTTTCATCTGAATCCTAGTAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGAGACACGGTGGAATaGGGAGGGACAGGGAGGATG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRDTVE*GGTGRM
Trigger: CATCCTCCCTGTCCCTCCTCATTCCACCGTGTCTCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCACAGAGGGTGGTGCTaGGACCTGGGCCCATCACAG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLHRGWC*DLGPSQ
Trigger: CTGTGATGGGCCCAGGTCTCAGCACCACCCTCTGTG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGGGGAAGAGGCCCTTaGTGTAGACGAGGACCAGGA +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRGRGP*CRRGPG
Trigger: TCCTGGTCCTCGTCTACATCAAGGGCCTCTTCCCCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATACTGAAGTCCTTCCTTaGCTCTTCCCTAGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHTEVLP*LFPRPR
Trigger: CCTTGGCCTAGGGAAGAGGCAAGGAAGGACTTCAGT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGGCACACATTTGCCTaGCTGGCTAAAATCGTGCAT +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLRHTFA*LAKIVH
Trigger: ATGCACGATTTTAGCCAGGCAGGCAAATGTGTGCCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAATGCTCCATGGACTTTaGTGGAAATGGTGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTMLHGL*WKWCGF
Trigger: GAAACCACACCATTTCCAGCAAAGTCCATGGAGCAT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTTAAAAGTACCGGATaGTCCATGGACTTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLKSTG*SMDFAG
Trigger: TCCAGCAAAGTCCATGGAGCATCCGGTACTTTTAAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGGGGGAGGTGGAGATaGTGGGCCAGTACATCAACC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMWGRWR*WASTST
Trigger: GGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGCAGAAGCCAGACATaGAACGGGAGACACGGTACC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGRSQT*NGRHGT
Trigger: GGTACCGTGTCTCCCGTTGCATGTCTGGCTTCTGCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGGACTTTGCTGGAAATaGTGTGGTTTCTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLGLCWK*CGFFPK
Trigger: CTTGGGGAAGAAACCACACCATTTCCAGCAAAGTCC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCACATGTACCCTTTCTaGCCTTCCAGGTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHHMYPF*PSRSCD
Trigger: GTCACAGGACCTGGAAGGCCAGAAAGGGTACATGTG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGCCCGCAAGCCACATaGACAGCCCCTGGATGTTTG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSPQAT*TAPGCL
Trigger: CAAACATCCAGGGGCTGTCCATGTGGCTTGCGGGCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGATCAACCTTCACTGCTaGTGGGCGCAGGTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMINLHC*WAQVAG
Trigger: CCCAGCTACCTGCGCCCACCAGCAGTGAAGGTTGAT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTTGCATGGGGGAGGTaGAGATGCTGGGCCAGTACA +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVAWGR*RCWAST
Trigger: TGTACTGGCCCAGCATCTCCACCTCCCCCATGCAAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAACGGTACCAGGGACCTaGTTGCATGGGGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPETVPGT*LHGGGG
Trigger: TCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TACATGATGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACTACCCATGGGACGCTTaGGGCAGAGAAAAGAGACCA +
Preference number: 2 (lower is better)
Translates to: YMMLQYGGLHPLCPVYAHYPWDA*GREKRP
Trigger: TGGTCTCTTTTCTCTGCCCCAAGCGTCCCATGGGTA...GTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTGTCCAAAATTACCCATaGGACGCTTGGGGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: CCSTVGSILSALCMHTHLVQNYP*DAWGRE
Trigger: TTCTCTGCCCCAAGCGTCCCATGGGTAATTTTGGAC...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 90 bp GGTAAGGATTCTTCTTGCAGTGGAGGTCATTTGGGAAGTCATTGCTaGTGGATCCTCGGATGGGGACCCATAGGGCCTTGGCTAGACGAG +
Preference number: 2 (lower is better)
Translates to: GKDSSCSGGHLGSHC*WILGWGPIGPWLDE
Trigger: CTCGTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGACAGAGGCCTCTCTaGCATCTTCTGGTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRQRPL*HLLVSS
Trigger: GGAGCTGACCAGAAGATGTCAGAGAGGCCTCTGTCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGCCTTCCAGGTCCTGTaGCTGACTTCTTGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEAFQVL*LTSWEG
Trigger: TCCCTCCCAAGAAGTCAGTCACAGGACCTGGAAGGC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCAAGGACAGCTTTTTaGCAATGTTGCTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGARTAF*QCCLSL
Trigger: CAAAGACAAGCAACATTGTCAAAAAGCTGTCCTTGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGCCTGGATTGCGGCTaGCTTCTGTGCACGAAAGTG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMCLDCG*LLCTKV
Trigger: CACTTTCGTGCACAGAAGTCAGCCGCAATCCAGGCA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGTGACAAAGTCATCTaGATAGCAATGGCACCGGAT +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSDKVI*IAMAPD
Trigger: ATCCGGTGCCATTGCTATGCAGATGACTTTGTCACT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGATGGGGAGATGGATaGCAAGGCCAAGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRWGDG*QGQGHL
Trigger: CAAATGACCTTGGCCTTGGCATCCATCTCCCCATCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCCTGGCTAAAATCGTaGATCTGTAGATGTAAGAAC +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGAWLKS*ICRCKN
Trigger: GTTCTTACATCTACAGATGCACGATTTTAGCCAGGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTCACTTACCAGGCTaGGGGTGCACAAGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLAHLPG*GCTRGR
Trigger: CCTACCCCTTGTGCACCCGCAGCCTGGTAAGTGAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGGACACCAGCCCAGTaGGGGAGAAGGAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLWTPAQ*GRRSLK
Trigger: CTTGAGGCTCCTTCTCCCCCACTGGGCTGGTGTCCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCAGGGACTAGGCTGTTaGCCCCAGCCGTCTATGGAG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLQGLGC*PQPSME
Trigger: CTCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGGGCTCATTCTGAGTaGGTGACAAGGAATGATGTC +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGAHSE*VTRNDV
Trigger: GACATCATTCCTTGTCACCCACTCAGAATGAGCCCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACTCCATGGACTTTGCTaGAAATGGTGTGGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLLHGLC*KWCGFF
Trigger: GAAGAAACCACACCATTTCCAGCAAAGTCCATGGAG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCCAATTCCTTTCTCTaGGAGCCCGCAAGCCACATG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPNSFL*EPASHM
Trigger: CATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGTAAAAGCTGCATCTaGGGGGACTTGTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGKSCI*GDLWPG
Trigger: TCCTGGCCACAAGTCCCCCCAGATGCAGCTTTTACC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTGGGGCTGCTCACTaGGCTCACTGTTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLAGAAH*AHCSWK
Trigger: CTTCCAGGAACAGTGAGCCCAGTGAGCAGCCCCAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp GGCTCTGGAAACAGTGGTAAGGATTCTTCTTGCAGTGGAGGTCATTaGGGAAGTCATTGCTTGTGGATCCTCGGATGGGGACCCATAGGG +
Preference number: 2 (lower is better)
Translates to: GSGNSGKDSSCSGGH*GSHCLWILGWGPIG
Trigger: CCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATCCTTACCACTGTTTCCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCTCAGGGGATGCTGCTaGTGCCAGTCGGAACTTGCA +
Preference number: 2 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLLRGCC*CQSELA
Trigger: TGCAAGTTCCGACTGGCATCAGCAGCATCCCCTGAG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATACCCTTGATGAAGGTTaGCAAAGGAGGGTGGAGATA +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHTLDEG*QRRVEI
Trigger: TATCTCCACCCTCCTTTGTCAACCTTCATCAAGGGT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGTAGAATCTCCTAGATaGACTCTGCATTTCACGTTG +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLVESPR*TLHFTL
Trigger: CAACGTGAAATGCAGAGTGCATCTAGGAGATTCTAC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGGGGGAGGTGGAGATaGTGGGCCAGTACATCAACC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLWGRWR*WASTST
Trigger: GGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTGTCTTTCCCTCACTaGTTGGCTGTCTGTGAGGTG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLSFPH*LAVCEV
Trigger: CACCTCACAGACAGCCAAGCAGTGAGGGAAAGACAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCAGCTCCCTTGCCATaGGCCTGGCCATTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSAPLP*AWPFLD
Trigger: GTCCAAGAATGGCCAGGCCCATGGCAAGGGAGCTGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAAGCGATCAGACCACTaGCTGAACCACTGGAGATGG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMKRSDH*LNHWRW
Trigger: CCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGGACACCAGCCCAGTaGGGGAGAAGGAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEWTPAQ*GRRSLK
Trigger: CTTGAGGCTCCTTCTCCCCCACTGGGCTGGTGTCCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGAGCATCTCCATGGTaGAATGTAATTGCTATTCTT +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGASPW*NVIAIL
Trigger: AAGAATAGCAATTACATTCCACCATGGAGATGCTCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATCAGGAGCATCTCCATaGTGGAATGTAATTGCTATT +
Preference number: 2 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSGASP*WNVIAI
Trigger: AATAGCAATTACATTCCACCATGGAGATGCTCCTGA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAAGCAAGATGGGCTGTaGCTCTGGATACCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMKQDGL*LWIPGS
Trigger: TGAGCCAGGTATCCAGAGCCACAGCCCATCTTGCTT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGTTTGCTCTGCCAGTaGGGTAAGGAAGATCCCTGG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMCLLCQ*GKEDPW
Trigger: CCAGGGATCTTCCTTACCCCACTGGCAGAGCAAACA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGCCTGTGGGACACTTaGGTTATCCACTGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGLWDT*VIHCSQ
Trigger: TTGGGAACAGTGGATAACCCAAGTGTCCCACAGGCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGACCCATAGGGCCTTaGCTAGACGAGGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGPIGP*LDEGAP
Trigger: AGGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTTGTGGATCCTCGGATaGGGACCCATAGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLWILG*GPIGPW
Trigger: CCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGAAGTCATTGCTTGTaGATCCTCGGATGGGGACCC +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGSHCL*ILGWGP
Trigger: GGGTCCCCATCCGAGGATCCACAAGCAATGACTTCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGAGGTGACTCAGTCATaGAAAGACCCCTTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMEVTQS*KDPLKA
Trigger: GGCCTTCAAGGGGTCTTTCCATGACTGAGTCACCTC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCTTCGTCCTGTGCCTaGATTGCGGCTGACTTCTGT +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSSSCA*IAADFC
Trigger: ACAGAAGTCAGCCGCAATCCAGGCACAGGACGAAGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp GGGCTGGCTTTGGGTGCAGGGATCATGCTGCCATTGGAATGTACCTaGGCCTGTGGGACACTTGGGTTATCCACTGTTCCCAAATTTAAA +
Preference number: 2 (lower is better)
Translates to: GLALGAGIMLPLECT*ACGTLGLSTVPKFK
Trigger: TTTAAATTTGGGAACAGTGGATAACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACATTCTTGGACTAACTaGGGGTCAGTGGCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEHSWTN*GSVAWS
Trigger: GGACCAAGCCACTGACCCTCAGTTAGTCCAAGAATG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTGAAGGCAAGACTGTaGATCCTTCTCCTCAACCTC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVKARL*ILLLNL
Trigger: GAGGTTGAGGAGAAGGATTCACAGTCTTGCCTTCAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTGGGTGACAAGGAATaGTGTCTGATGTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVGDKE*CLMFGE
Trigger: CTCCCCAAACATCAGACATCATTCCTTGTCACCCAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTCATTCTGAGTGGGTaGCAAGGAATGATGTCTGAT +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLILSG*QGMMSD
Trigger: ATCAGACATCATTCCTTGTCACCCACTCAGAATGAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATTTAAAGGAAGAGGCTaGGGGTTCAAGGCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEFKGRG*GFKASQ
Trigger: CTGGGAGGCCTTGAACCCTCAGCCTCTTCCTTTAAA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCTCCTCCTGTCCTCTaGACCTCTCCTCATCCCCTT +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPAPPVL*TSPHPL
Trigger: AAGGGGATGAGGAGAGGTTCAGAGGACAGGAGGAGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAATAGCAGCAGCCATGTaGGATGCCACCCCTAGCATT +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEIAAAM*DATPSI
Trigger: AATGCTAGGGGTGGCATCTCACATGGCTGCTGCTAT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACGCAGGACATGAGCTATaGTGTATGGCTGGGGTCACA +
Preference number: 2 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHAGHEL*CMAGVT
Trigger: TGTGACCCCAGCCATACATCATAGCTCATGTCCTGC...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAATGGAAAACAAATTCTaGTTCCAGGGTAGATGCAAC +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLMENKF*FQGRCN
Trigger: GTTGCATCTACCCTGGAAGCAGAATTTGTTTTCCAT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGATGGGGAGATGGATaGCAAGGCCAAGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRWGDG*QGQGHL
Trigger: CAAATGACCTTGGCCTTGGCATCCATCTCCCCATCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATATGCTCCATGGACTTTaGTGGAAATGGTGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHMLHGL*WKWCGF
Trigger: GAAACCACACCATTTCCAGCAAAGTCCATGGAGCAT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATTCTTCCTCTTCCAATaGATTGTTTCCCATTTTCCT +
Preference number: 2 (lower is better)
Translates to: EARHATGDTVPGTWLHGGFFLFQ*IVSHFP
Trigger: AGGAAAATGGGAAACAATGCATTGGAAGAGGAAGAA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp AACAGCCATGCTTCAATGCACACAGAGCCAGTTTCACATGGAACTCCTGGGACGCTTTACCCATCCCTATaGAGGTGCACATGGCCTGTT +
Preference number: 2 (lower is better)
Translates to: NSHASMHTEPVSHGTPGTLYPSL*RCTWPV
Trigger: AACAGGCCATGTGCACCTGCATAGGGATGGGTAAAG...CGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTCAGCTCCCTTGCCATaGGCCTGGCCATTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSAPLP*AWPFLD
Trigger: GTCCAAGAATGGCCAGGCCCATGGCAAGGGAGCTGA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACTGAACCACTGGAGATaGAACTGTGGGAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELNHWR*NCGKGE
Trigger: CTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGGTTGGCTGGCATTTTaGGCTGTCTCCGTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLGWLAF*AVSVRL
Trigger: AAGCCTCACGGAGACAGCCCAAAATGCCAGCCAACC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCATTGGAATGTACCTTaGCCTGTGGGACACTTGGGT +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMHWNVP*PVGHLG
Trigger: ACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGGGAGGTGGAGATGCTaGGCCAGTACATCAACCTTC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLGRWRC*ASTSTF
Trigger: GAAGGTTGATGTACTGGCCCAGCATCTCCACCTCCC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCTCCTGTACTCAAGTaGATAAATCGCCCTGGGACA +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMAPVLK*INRPGT
Trigger: TGTCCCAGGGCGATTTATCCACTTGAGTACAGGAGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATAGATGCTGCAGTACGGTaGGCTCCATCCTCTCTGCCC +
Preference number: 2 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIDAAVR*APSSLP
Trigger: GGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATC...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CCA 90 bp AACAGCCATGCTTCAATGCACACAGAGCCAGTTTCACATGGAACTCCTGGGACGTCCCCACCGGCTCTATaGGGGAATTATGGAATTGTG +
Preference number: 2 (lower is better)
Translates to: NSHASMHTEPVSHGTPGTSPPAL*GNYGIV
Trigger: CACAATTCCATAATTCCCCCATAGAGCCGGTGGGGA...CGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 90 bp GCAGAGCACCTTCCTACCTATGTCTGTCTGTCTTTCCCTCACTGCTaGGCTGTCTGTGAGGTGGGAGGTTTGTCCTTGACTGATAACAAT +
Preference number: 2 (lower is better)
Translates to: AEHLPTYVCLSFPHC*AVCEVGGLSLTDNN
Trigger: ATTGTTATCAGTCAAGGACAAACCTCCCACCTCACAGACAGCCAAGCAGTGAGGGAAAGACAGACAGACATAGGTAGGAAGGTGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAATGATGAGAGACAGCTaGGATGTTGATGAAATCATT +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLMMRDS*DVDEII
Trigger: AATGATTTCATCAACATCTCAGCTGTCTCTCATCAT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAAGGTCTCCTTAGGATaGAAGGTTCCTAGAACCCTC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMKVSLG*KVPRTL
Trigger: GAGGGTTCTAGGAACCTTTCATCCTAAGGAGACCTT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTGAAGGCAAGACTGTaGATCCTTCTCCTCAACCTC +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVKARL*ILLLNL
Trigger: GAGGTTGAGGAGAAGGATTCACAGTCTTGCCTTCAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGACAAGAAATCCTTTTaGGCTTTCCGCCTACACCTG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMDKKSF*AFRLHL
Trigger: CAGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGGGAGGTTTGTCCTTaGCTGATAACAATACTGGCC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMWEVCP*LITILA
Trigger: GGCCAGTATTGTTATCAGTCAAGGACAAACCTCCCA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGAGGGTGGAGATAGATaGTTTCTCTTGACAGCACTC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMEGGDR*FLLTAL
Trigger: GAGTGCTGTCAAGAGAAAGCATCTATCTCCACCCTC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTTAGGATGGGAGACTaGACCAGACAGCACCTAAGG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLRMGD*TRQHLR
Trigger: CCTTAGGTGCTGTCTGGTGCAGTCTCCCATCCTAAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATGGGTGCAGGGATCATaGTGCCATTGGAATGTACCT +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEWVQGS*CHWNVP
Trigger: AGGTACATTCCAATGGCAGCATGATCCCTGCACCCA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCATTTGGGAAGTCATTaGTTGTGGATCCTCGGATGG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMHLGSH*LWILGW
Trigger: CCATCCGAGGATCCACAAGCAATGACTTCCCAAATG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTTGGTCCAATCGTGTTaGCAGAGCAACTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLVQSC*QSNWKR
Trigger: TCTCTTCCAGTTGCTCTGCCAACACGATTGGACCAA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTCCCTCTGGAGACCTaGAAAAGGACAGGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVPLET*KRTGSL
Trigger: GAGGCTTCCTGTCCTTTTCCAGGTCTCCAGAGGGAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGATGGGGATGGAGCCATaGAGATGGCTGGAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLMGMEP*RWLEVE
Trigger: TTCTACCTCCAGCCATCTCCATGGCTCCATCCCCAT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGGGCTCATTCTGAGTaGGTGACAAGGAATGATGTC +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGAHSE*VTRNDV
Trigger: GACATCATTCCTTGTCACCCACTCAGAATGAGCCCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCCACAGGACAAAGTTaGCCCAATTCCTTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPTGQS*PNSFLW
Trigger: CCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGGAAGGACAAAGAATaGGTAAAAGCTGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGKDKE*VKAASG
Trigger: CCCAGATGCAGCTTTTACCCATTCTTTGTCCTTCCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAATGTACCTTGGCCTGTaGGACACTTGGGTTATCCAC +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEMYLGL*DTWVIH
Trigger: GTGGATAACCCAAGTGTCCCACAGGCCAAGGTACAT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTTTAGGGGCTGGCTTTaGGTGCAGGGATCATGCTGC +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPFRGWL*VQGSCC
Trigger: GCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGTGGATAAATCGCCCTaGGACAGAGGCTATGTGTGC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLVDKSP*DRGYVC
Trigger: GCACACATAGCCTCTGTCCCAGGGCGATTTATCCAC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGAAGTCATTGCTTGTaGATCCTCGGATGGGGACCC +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGSHCL*ILGWGP
Trigger: GGGTCCCCATCCGAGGATCCACAAGCAATGACTTCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACGCTATGATGTATGGCTaGGGTCACAGGGAGGTAGAT +
Preference number: 2 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHAMMYG*GHREVD
Trigger: ATCTACCTCCCTGTGACCCCAGCCATACATCATAGC...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CCA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGATGAGCTATGATGTATaGCTGGGGTCACAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEMSYDV*LGSQGG
Trigger: ACCTCCCTGTGACCCCAGCCATACATCATAGCTCAT...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 90 bp AGAAATTGCTGGAAGAAGAGCTGCATAGACCAAGTCTACTTGCTTTaGCAATCCTGGCGGAGGGAAAGCTTGGGTCTTCCCATGACCCAT +
Preference number: 2 (lower is better)
Translates to: RNCWKKSCIDQVYLL*QSWRRESLGLPMTH
Trigger: ATGGGTCATGGGAAGACCCAAGCTTTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTTGGTCTATGCAGCTCTTCTTCCAGCAATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGATGATAATCTAGACTaGGGCACGGCTTGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDDNLD*GTAWCV
Trigger: GACACACCAAGCCGTGCCTCAGTCTAGATTATCATC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGATCAGACCACTGGCTaGACCACTGGAGATGGAACT +
Preference number: 2 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEDQTTG*TTGDGT
Trigger: AGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGATAGATGCTTTCTCTTaGCAGCACTCAGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLIDAFS*QHSGLW
Trigger: CCAGAGCCCTGAGTGCTGTCAAGAGAAAGCATCTAT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTCTGCGATGTCACATaGTGCCCTGTTCCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLCDVT*CPVPRS
Trigger: GGACCTTGGAACAGGGCATCATGTGACATCGCAGAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGCTATTCTTTCTCCTaGCTGGCTTTCTACTGGCGG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLCYSFS*LAFYWR
Trigger: CCGCCAGTAGAAAGCCAGGCAGGAGAAAGAATAGCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGGCACACATTTGCCTaGCTGGCTAAAATCGTGCAT +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERHTFA*LAKIVH
Trigger: ATGCACGATTTTAGCCAGGCAGGCAAATGTGTGCCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATTCTCCACCTGGTACTaGACTTGCCAAAACCTTTGG +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEFSTWY*TCQNLW
Trigger: CCAAAGGTTTTGGCAAGTGCAGTACCAGGTGGAGAA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp ATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTCCTCCTGGAATTATGGAATTGTaGTGGATAGTGGCCATGCAG +
Preference number: 2 (lower is better)
Translates to: IGAHDTKCFHFLRHSPPPGIMEL*WIVAMQ
Trigger: CTGCATGGCCACTATCCAGCACAATTCCATAATTCC...AGGAGGAGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATTGGTCCAATCGTGTTaGCAGAGCAACTGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELVQSC*QSNWKR
Trigger: TCTCTTCCAGTTGCTCTGCCAACACGATTGGACCAA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAATGTCCCCTGTCCCTaGCTCCTCATTCGTTATTTG +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPENVPCP*LLIRYL
Trigger: CAAATAACGAATGAGGAGCCAGGGACAGGGGACATT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGAGCATCTCCATGGTaGAATGTAATTGCTATTCTT +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGASPW*NVIAIL
Trigger: AAGAATAGCAATTACATTCCACCATGGAGATGCTCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGAATTTGAGGGTAAATaGAAAACAAATTCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLEFEGK*KTNSAS
Trigger: GGAAGCAGAATTTGTTTTCCATTTACCCTCAAATTC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCACATGTACCCTTTCTaGCCTTCCAGGTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPHMYPF*PSRSCD
Trigger: GTCACAGGACCTGGAAGGCCAGAAAGGGTACATGTG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCATTGGAATGTACCTTaGCCTGTGGGACACTTGGGT +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLHWNVP*PVGHLG
Trigger: ACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTCCTGTACTCAAGTaGATAAATCGCCCTGGGACA +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLAPVLK*INRPGT
Trigger: TGTCCCAGGGCGATTTATCCACTTGAGTACAGGAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGACATCAAAGCGGGTaGGAATGGAATAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRHQSG*EWNKVR
Trigger: CCTCACTTTATTCCATTCCCACCCGCTTTGATGTCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCAGCAGGACCCTGCTaGAAGAGATGGGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSAGPC*KRWAGP
Trigger: GGGGCCAGCCCATCTCTTCCAGCAGGGTCCTGCTGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAAATGATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTCCTAAGGACTTGGGGTaGCAGGACATGAGCTATGAT +
Preference number: 2 (lower is better)
Translates to: EMIGAHDTKCFHFLRHSPPKDLG*QDMSYD
Trigger: ATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGG...AGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTATCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAATAGATGCTTTCTCTTaGCAGCACTCAGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEIDAFS*QHSGLW
Trigger: CCAGAGCCCTGAGTGCTGTCAAGAGAAAGCATCTAT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTACCCTTGATGAAGGTTaGCAAAGGAGGGTGGAGATA +
Preference number: 2 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLTLDEG*QRRVEI
Trigger: TATCTCCACCCTCCTTTGTCAACCTTCATCAAGGGT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGTCTGGACAGCCCAGTaGCAAAGTCATCTGCATAGC +
Preference number: 2 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSVWTAQ*QSHLHS
Trigger: GCTATGCAGATGACTTTGTCACTGGGCTGTCCAGAC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGTGTTGAAATGTCCTaGAGCTGCAGGATGAATGGA +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESVEMS*SCRMNG
Trigger: TCCATTCATCCTGCAGCTTCAGGACATTTCAACACT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGGGAGGGAATAAAATaGTCAAGGATAGAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHWEGIK*SRIEKS
Trigger: TGACTTTTCTATCCTTGATCATTTTATTCCCTCCCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGCTTGGGTCTTCCCATaGCCCATCCCTCACAGAGCC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQAWVFP*PIPHRA
Trigger: GGCTCTGTGAGGGATGGGTCATGGGAAGACCCAAGC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCTTTCTTCTCACAGCTaGAAAGCGATCAGACCACTG +
Preference number: 2 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLLSSHS*KAIRPL
Trigger: CAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTAGAATCTCCTAGATaGACTCTGCATTTCACGTTG +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVESPR*TLHFTL
Trigger: CAACGTGAAATGCAGAGTGCATCTAGGAGATTCTAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGTGACAAAGTCATCTaGATAGCAATGGCACCGGAT +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESDKVI*IAMAPD
Trigger: ATCCGGTGCCATTGCTATGCAGATGACTTTGTCACT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAATGTCCCCTGTCCCTaGCTCCTCATTCGTTATTTG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLNVPCP*LLIRYL
Trigger: CAAATAACGAATGAGGAGCCAGGGACAGGGGACATT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGCAGGCAGGTCCCTCTaGAGACCTGGAAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: LFPFLPLCYISATRIQMKAGRSL*RPGKGQ
Trigger: CTGTCCTTTTCCAGGTCTCCAGAGGGACCTGCCTGC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAATGATGTCTGATGTTTaGGGAGTGAAGGCAAGACTG +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEMMSDV*GVKARL
Trigger: CAGTCTTGCCTTCACTCCCCAAACATCAGACATCAT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAAGCTGCAGGATGAATaGATGAGCAAGGGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLKLQDE*MSKGKE
Trigger: CTCTTTCCCCTTGCTCATCCATTCATCCTGCAGCTT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTGGCTCTGGATACCTaGCTCAAATTTCTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVALDT*LKFLSP
Trigger: GGGACTGAGAAATTTGAGCCAGGTATCCAGAGCCAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCCACAGGACAAAGTTaGCCCAATTCCTTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPTGQS*PNSFLW
Trigger: CCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTCCTGGGAACAGTCCTaGACAGTCTGCCTCAAACTT +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSWEQS*TVCLKL
Trigger: AAGTTTGAGGCAGACTGTCCAGGACTGTTCCCAGGA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAACCTTCACTGCTGGTaGGCGCAGGTAGCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQNLHCW*AQVAGP
Trigger: AGGCCCAGCTACCTGCGCCCACCAGCAGTGAAGGTT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGGGTAGGTCTTCTCTaGGGGTCAGGTGAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGVGLL*GSGELL
Trigger: CAGGAGCTCACCTGACCCCCAGAGAAGACCTACCCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCCCACCTCAGGGCCTaGAGGCCTTGTTCCTGCTCA +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSHLRA*RPCSCS
Trigger: TGAGCAGGAACAAGGCCTCCAGGCCCTGAGGTGGGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATATTTTGGGTGCTCTCCTaGACCAGATGCCAACAGAGC +
Preference number: 2 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIFWVLS*TRCQQS
Trigger: GCTCTGTTGGCATCTGGTCCAGGAGAGCACCCAAAA...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 90 bp CCCACATGTACCCTTTCTGGCCTTCCAGGTCCTGTGACTGACTTCTaGGGAGGGAATAAAATGATCAAGGATAGAAAAGTCAAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: PTCTLSGLPGPVTDF*GGNKMIKDRKVKLL
Trigger: GAGAAGCTTGACTTTTCTATCCTTGATCATTTTATTCCCTCCCAAGAAGTCAGTCACAGGACCTGGAAGGCCAGAAAGGGTACATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGTGGGTGACAAGGAATaGTGTCTGATGTTTGGGGAG +
Preference number: 2 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSVGDKE*CLMFGE
Trigger: CTCCCCAAACATCAGACATCATTCCTTGTCACCCAC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GACTACACTTTATTTCCCAGTAAGCTAGTAGAAATGATAGGAGCACATGACACCTGGGGTGGCAGGACATaGGCTATGATGTATGGCTGG +
Preference number: 2 (lower is better)
Translates to: DYTLFPSKLVEMIGAHDTWGGRT*AMMYGW
Trigger: CCAGCCATACATCATAGCTCATGTCCTGCCACCCCA...GGTGTCATGTGCTCCTATCATTTCTACTAGCTTACTGGGAAATAAAGTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCTGGTCAGCTCCCTTaGCATGGGCCTGGCCATTCT +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSGQLP*HGPGHS
Trigger: AGAATGGCCAGGCCCATGGCAAGGGAGCTGACCAGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTTAAAAGTACCGGATaGTCCATGGACTTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLKSTG*SMDFAG
Trigger: TCCAGCAAAGTCCATGGAGCATCCGGTACTTTTAAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTTCTCCACCTGGTACTaGACTTGCCAAAACCTTTGG +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPFSTWY*TCQNLW
Trigger: CCAAAGGTTTTGGCAAGTGCAGTACCAGGTGGAGAA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGACACATTTGCCTGCCTaGCTAAAATCGTGCATCTGT +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLTHLPA*LKSCIC
Trigger: ACAGATGCACGATTTTAGCCAGGCAGGCAAATGTGT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGACTTTGCTGGAAATaGTGTGGTTTCTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGLCWK*CGFFPK
Trigger: CTTGGGGAAGAAACCACACCATTTCCAGCAAAGTCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGGAAGGACAAAGAATaGGTAAAAGCTGCATCTGGG +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGKDKE*VKAASG
Trigger: CCCAGATGCAGCTTTTACCCATTCTTTGTCCTTCCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAAGGTCTCCTTAGGATaGAAGGTTCCTAGAACCCTC +
Preference number: 2 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSKVSLG*KVPRTL
Trigger: GAGGGTTCTAGGAACCTTTCATCCTAAGGAGACCTT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCTGCTCCAGCCACATaGAGGAGGTGTAGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPAPAT*RRCSLS
Trigger: AGAAAGGCTACACCTCCTGCATGTGGCTGGAGCAGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCTCCCCATAGCCTCTaGTTACCTAGTATCAATTTC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSPHSL*LPSINF
Trigger: GAAATTGATACTAGGTAAGCAGAGGCTATGGGGAGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TCAACTCTTTCAAAGTCCTTGCTTTACCCATCCCTATGCAGGTGCACATGGCCTCACAAGAGTCAAACATaGCTACACTCCATTGTCCAA +
Preference number: 2 (lower is better)
Translates to: STLSKSLLYPSLCRCTWPHKSQT*LHSIVQ
Trigger: TTGGACAATGGAGTGTAGGCATGTTTGACTCTTGTG...AGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR GCA 90 bp GAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTCCATGCAGGAGACACTaGTCACGCTTTGTTGTAACC +
Preference number: 2 (lower is better)
Translates to: ELHCCVSSRNYTRFSVVVPCRRH*SRFVVT
Trigger: GGTTACAACAAAGCGTGAGCAGTGTCTCCTGCATGG...AACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGTTGGCTGGCATTTTaGGCTGTCTCCGTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGWLAF*AVSVRL
Trigger: AAGCCTCACGGAGACAGCCCAAAATGCCAGCCAACC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTATGATGTCTGATGTTTaGGGAGTGAAGGCAAGACTG +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPMMSDV*GVKARL
Trigger: CAGTCTTGCCTTCACTCCCCAAACATCAGACATCAT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTCAAGCTTCTCCACCTaGTACTGCACTTGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSSFST*YCTCQN
Trigger: GTTTTGGCAAGTGCAGTACCAGGTGGAGAAGCTTGA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGGAGGTGGAGATGCTaGGCCAGTACATCAACCTTC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGRWRC*ASTSTF
Trigger: GAAGGTTGATGTACTGGCCCAGCATCTCCACCTCCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGATTCTTCTTGCAGTaGAGGTCATTTGGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGFFLQ*RSFGKS
Trigger: TGACTTCCCAAATGACCTCCACTGCAAGAAGAATCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAATGATGAGAGACAGCTaGGATGTTGATGAAATCATT +
Preference number: 2 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEMMRDS*DVDEII
Trigger: AATGATTTCATCAACATCTCAGCTGTCTCTCATCAT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGAGAGAAACAGCGCTaGTCAGGGGATGCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQREKQR*SGDAAD
Trigger: ATCAGCAGCATCCCCTGAGCAGCGCTGTTTCTCTCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAACTGAAGTCCTTCCTTaGCTCTTCCCTAGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQTEVLP*LFPRPR
Trigger: CCTTGGCCTAGGGAAGAGGCAAGGAAGGACTTCAGT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCAACCCTTTATATGTaGAAAAATATTGTAGTGACC +
Preference number: 2 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPTLYM*KNIVVT
Trigger: GGTCACTACAATATTTTTGCACATATAAAGGGTTGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTTAGTGGCACTATTTaGAGCTACCAAGAAATGTCA +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLSGTI*SYQEMS
Trigger: TGACATTTCTTGGTAGCTGCAAATAGTGCCACTAAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGGAGGCCTTGTTCCTaGTCAAAGCAGCCAACACAC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQWRPCS*SKQPTH
Trigger: GTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTCCA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACTCTCTGACATCTTCTaGTCAGCTCCCTTGCCATGG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLSDIF*SAPLPW
Trigger: CCATGGCAAGGGAGCTGACCAGAAGATGTCAGAGAG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACACTGGCTGAACCACTaGAGATGGAACTGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQHWLNH*RWNCGK
Trigger: CTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAAGCGATCAGACCACTaGCTGAACCACTGGAGATGG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQKRSDH*LNHWRW
Trigger: CCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAAGCAAGATGGGCTGTaGCTCTGGATACCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQKQDGL*LWIPGS
Trigger: TGAGCCAGGTATCCAGAGCCACAGCCCATCTTGCTT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACTGGAAGAGATGGGCTaGCCCCTACATGCTAAAGTG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLEEMG*PLHAKV
Trigger: CACTTTAGCATGTAGGGGCCAGCCCATCTCTTCCAG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGATGATAATCTAGACTaGGGCACGGCTTGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQDDNLD*GTAWCV
Trigger: GACACACCAAGCCGTGCCTCAGTCTAGATTATCATC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAGAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGAATGATAGGAGCACATaGCACCAAGTGTTTCCACTT +
Preference number: 2 (lower is better)
Translates to: ENYTVVYPPGTIRGLVWWNDRST*HQVFPL
Trigger: AAGTGGAAACACTTGGTGTCATGTGCTCCTATCATT...CCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAATGGAAAACAAATTCTaGTTCCAGGGTAGATGCAAC +
Preference number: 2 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEMENKF*FQGRCN
Trigger: GTTGCATCTACCCTGGAAGCAGAATTTGTTTTCCAT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTACCTGGTACTGCACTTaGCAAAACCTTTGGTTATTT +
Preference number: 2 (lower is better)
Translates to: FPNERSGHLGFLSRACHPTWYCT*QNLWLF
Trigger: AAATAACCAAAGGTTTTGGCAAGTGCAGTACCAGGT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCTGGATGTTTGCTCTaGCAGTGGGGTAAGGAAGAT +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPGCLL*QWGKED
Trigger: ATCTTCCTTACCCCACTGGCAGAGCAAACATCCAGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGATGGGCTGTGGCTCTaGATACCTGGCTCAAATTTC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQDGLWL*IPGSNF
Trigger: GAAATTTGAGCCAGGTATCCAGAGCCACAGCCCATC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGGGAGGTTTGTCCTTaGCTGATAACAATACTGGCC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQWEVCP*LITILA
Trigger: GGCCAGTATTGTTATCAGTCAAGGACAAACCTCCCA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp GAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTGATGGTTCTGAGCACTaGGTTAATTACATGATGCTG +
Preference number: 2 (lower is better)
Translates to: ELHCCVSSRNYTRFSVVVDGSEH*VNYMML
Trigger: CAGCATCATGTAATTAACTCAGTGCTCAGAACCATC...AACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGAGGGTGGAGATAGATaGTTTCTCTTGACAGCACTC +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQEGGDR*FLLTAL
Trigger: GAGTGCTGTCAAGAGAAAGCATCTATCTCCACCCTC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCAACCCTTTATATGTaGAAAAATATTGTAGTGACC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPTLYM*KNIVVT
Trigger: GGTCACTACAATATTTTTGCACATATAAAGGGTTGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGAATTTGAGGGTAAATaGAAAACAAATTCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLEFEGK*KTNSAS
Trigger: GGAAGCAGAATTTGTTTTCCATTTACCCTCAAATTC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAAGCTGCAGGATGAATaGATGAGCAAGGGGAAAGAG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQKLQDE*MSKGKE
Trigger: CTCTTTCCCCTTGCTCATCCATTCATCCTGCAGCTT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGATTCTTCTTGCAGTaGAGGTCATTTGGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGFFLQ*RSFGKS
Trigger: TGACTTCCCAAATGACCTCCACTGCAAGAAGAATCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGATTACTTTCCAAATaGGAGGAGTGGTCATTTAGG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGLLSK*EEWSFR
Trigger: CCTAAATGACCACTCCTCTCATTTGGAAAGTAATCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATCAGGAGCATCTCCATaGTGGAATGTAATTGCTATT +
Preference number: 2 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSGASP*WNVIAI
Trigger: AATAGCAATTACATTCCACCATGGAGATGCTCCTGA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp GAGAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTAAGGAAAGGAGACTaGACAACACCAATTAACTTT +
Preference number: 2 (lower is better)
Translates to: ENYTVVYPPGTIRGLVWWLRKGD*TTPINF
Trigger: AAAGTTAATTGGTGTTGTCCAGTCTCCTTTCCTTAA...CCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 90 bp TCAAAACCAGAAGACCCTCTTCTTAGAGATCTCATCCACATACATTaGAGGCTCATTTTAACACTGTTGTCTAAAGATATGCTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: SKPEDPLLRDLIHIH*RLILTLLSKDMLCF
Trigger: AAAGCAAAGCATATCTTTAGACAACAGTGTTAAAATGAGCCTCAAATGTATGTGGATGAGATCTCTAAGAAGAGGGTCTTCTGGTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAAAACACAAAATCGTTaGTTTCCGAATGGAAACAAG +
Preference number: 2 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQKTQNR*FPNGNK
Trigger: CTTGTTTCCATTCGGAAACCAACGATTTTGTGTTTT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 90 bp CTTAGAGATCTCATCCACATACATTTGAGGCTCATTTTAACACTGTaGTCTAAAGATATGCTTTGCTTTGTTCTAACAAAGGGTCAATGT +
Preference number: 2 (lower is better)
Translates to: LRDLIHIHLRLILTL*SKDMLCFVLTKGQC
Trigger: ACATTGACCCTTTGTTAGAACAAAGCAAAGCATATCTTTAGACAACAGTGTTAAAATGAGCCTCAAATGTATGTGGATGAGATCTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GAGGTGGAGATGCTGGGCCAGTACATCAACCTTCACTaGTGGTGGGCGCAGGTAGCTGGGCCTGAGGGGACC +
Preference number: 3 (lower is better)
Translates to: EVEMLGQYINLH*WWAQVAGPEGT
Trigger: GGTCCCCTCAGGCCCAGCTACCTGCGCCCACCAGCAGTGAAGGTTGATGTACTGGCCCAGCATCTCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp CTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTaGTTTCCTATGGACAAGCGCCCTCTCCTTCCACCC +
Preference number: 3 (lower is better)
Translates to: LFQGPGLGRRPP*FPMDKRPLLPP
Trigger: GGGTGGAAGGAGAGGGCGCTTGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GCTCGTGGCAGGAGGAGCACAGGCAGAAGCCAGACATaGAACGGGAGACACGGTACCAGGGACCTGGTTGCA +
Preference number: 3 (lower is better)
Translates to: ARGRRSTGRSQT*NGRHGTRDLVA
Trigger: TGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTCTGCCTGTGCTCCTCCTGCCACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GCCAGACATGCAACGGGAGACACGGTACCAGGGACCTaGTTGCATGGGGGAGGTGGAGATGCTGGGCCAGTA +
Preference number: 3 (lower is better)
Translates to: ARHATGDTVPGT*LHGGGGDAGPV
Trigger: TACTGGCCCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp TGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATaGGGGAGGTGGAGATGCTGGGCCAGTACATCAACC +
Preference number: 3 (lower is better)
Translates to: CNGRHGTRDLVA*GRWRCWASTST
Trigger: GGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGCTGGAGGCTGAGGTaGGCTGGCATTTTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSWRLR*AGILGC
Trigger: ACAGCCCAAAATGCCAGCCAACCTCAGCCTCCAGCT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CAGGCTGCGGGTGCACAAGGGGTAGGCTTTAGGGGCTaGCTTTGGGTGCAGGGATCATGCTGCCATTGGAAT +
Preference number: 3 (lower is better)
Translates to: QAAGAQGVGFRG*LWVQGSCCHWN
Trigger: ATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTACCCCTTGTGCACCCGCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATACAGGGACTAGGCTGTaGGCCCCAGCCGTCTATGGA +
Preference number: 3 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHTGTRL*APAVYG
Trigger: TCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTGT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp GGCTCAGACCAAAGCAGGGGCTGCCAAAGTGGAAGGTaGAGTAGCAGCACAGAAATGTCCCCTGTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: GSDQSRGCQSGR*SSSTEMSPVPG
Trigger: GCCAGGGACAGGGGACATTTCTGTGCTGCTACTTCACCTTCCACTTTGGCAGCCCCTGCTTTGGTCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp CTCAAATTTCTCAGTCCCCAAGCAGGCCACGGGGACTaGAGCAAACAGAGCGGCAGAAACAACCCACCCACC +
Preference number: 3 (lower is better)
Translates to: LKFLSPQAGHGD*SKQSGRNNPPT
Trigger: GGTGGGTGGGTTGTTTCTGCCGCTCTGTTTGCTGCAGTCCCCGTGGCCTGCTTGGGGACTGAGAAATTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CACCGGATTCTGCAGAGGGAACAGGGACTAGGCTGTTaGCCCCAGCCGTCTATGGAGTTCTCAGGAAGGATG +
Preference number: 3 (lower is better)
Translates to: HRILQREQGLGC*PQPSMEFSGRM
Trigger: CATCCTTCCTGAGAACTCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTGTTCCCTCTGCAGAATCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GCGGGTGCACAAGGGGTAGGCTTTAGGGGCTGGCTTTaGGTGCAGGGATCATGCTGCCATTGGAATGTACCT +
Preference number: 3 (lower is better)
Translates to: AGAQGVGFRGWL*VQGSCCHWNVP
Trigger: AGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTACCCCTTGTGCACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CAGTGGCATCCAATCCTTCCTTCCCACCTCAGGGCCTaGAGGCCTTGTTCCTGCTCAAAGCAGCCAACACAC +
Preference number: 3 (lower is better)
Translates to: QWHPILPSHLRA*RPCSCSKQPTH
Trigger: GTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTCCAGGCCCTGAGGTGGGAAGGAAGGATTGGATGCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGACTGAGGCACGGCTaGGTGTGTCCCCCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERLRHG*VCPPPG
Trigger: CCCTGGAGGGGGACACACCAAGCCGTGCCTCAGTCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTCCTCATTCGTTATTaGCACCCTGCTGCTGACATG +
Preference number: 3 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLLIRY*HPAADM
Trigger: CATGTCAGCAGCAGGGTGCAAATAACGAATGAGGAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGATAGATGCTTTCTCTaGACAGCACTCAGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: EARHATGDTVPGTWLHGGDRCFL*TALRAL
Trigger: CAGAGCCCTGAGTGCTGTCAAGAGAAAGCATCTATC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp ATGTCTTTTCCACCATCTGTCCTCTGCGATGTCACATaGTGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCG +
Preference number: 3 (lower is better)
Translates to: MSFPPSVLCDVT*CPVPRSRPRQA
Trigger: CGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCATGTGACATCGCAGAGGACAGATGGTGGAAAAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GGCTTTAGGGGCTGGCTTTGGGTGCAGGGATCATGCTaGCATTGGAATGTACCTTGGCCTGTGGGACACTTG +
Preference number: 3 (lower is better)
Translates to: GFRGWLWVQGSC*HWNVPWPVGHL
Trigger: CAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GTAGGCTTTAGGGGCTGGCTTTGGGTGCAGGGATCATaGTGCCATTGGAATGTACCTTGGCCTGTGGGACAC +
Preference number: 3 (lower is better)
Translates to: VGFRGWLWVQGS*CHWNVPWPVGH
Trigger: GTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GGTCATTTGGGAAGTCATTGCTTGTGGATCCTCGGATaGGGACCCATAGGGCCTTGGCTAGACGAGGGAGCT +
Preference number: 3 (lower is better)
Translates to: GHLGSHCLWILG*GPIGPWLDEGA
Trigger: AGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GCAGCCCAGAGAGCCAAGCATAGACATCAAAGCGGGTaGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGG +
Preference number: 3 (lower is better)
Translates to: AAQRAKHRHQSG*EWNKVRLPQPR
Trigger: CCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCACCCGCTTTGATGTCTATGCTTGGCTCTCTGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAGACTGAGGCACGGCTaGGTGTGTCCCCCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLRLRHG*VCPPPG
Trigger: CCCTGGAGGGGGACACACCAAGCCGTGCCTCAGTCT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGACAGCCAGAAAATTaGTCTGTCCTTGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGQPEN*SVLVSS
Trigger: AGAGGAGACAAGGACAGACAAATTTTCTGGCTGTCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCCAGGAAGGCAGCTTaGGGTGGGGTAGGATGGGGC +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLARKAA*GGVGWG
Trigger: GCCCCATCCTACCCCACCCAAAGCTGCCTTCCTGGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGGCTTCTCTGGGCCTaGTGCCTGCAGAGCACCTTC +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGLLWA*CLQSTF
Trigger: GAAGGTGCTCTGCAGGCACAAGGCCCAGAGAAGCCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTTTTTCCCTAAGGACTaGGGGTGGCAGGACATGAGC +
Preference number: 3 (lower is better)
Translates to: CCSTVGSILSALCMHTHLFFPKD*GWQDMS
Trigger: GCTCATGTCCTGCCACCCCAAGTCCTTAGGGAAAAA...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR TCA 72 bp TCGGAACTTGCACTTGGTAAAGATGATAATCTAGACTaGGGCACGGCTTGGTGTGTCCCCCTCCAGGGCGGC +
Preference number: 3 (lower is better)
Translates to: SELALGKDDNLD*GTAWCVPLQGG
Trigger: GCCGCCCTGGAGGGGGACACACCAAGCCGTGCCTCAGTCTAGATTATCATCTTTACCAAGTGCAAGTTCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp CGGAAAGAGGCAGAGAGAAAGAGAGAGAAACAGCGCTaGTCAGGGGATGCTGCTGATGCCAGTCGGAACTTG +
Preference number: 3 (lower is better)
Translates to: RKEAERKREKQR*SGDAADASRNL
Trigger: CAAGTTCCGACTGGCATCAGCAGCATCCCCTGAGCAGCGCTGTTTCTCTCTCTTTCTCTCTGCCTCTTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GCCACATGCAGGAGGTGTAGCCTTTCTTCTCACAGCTaGAAAGCGATCAGACCACTGGCTGAACCACTGGAG +
Preference number: 3 (lower is better)
Translates to: ATCRRCSLSSHS*KAIRPLAEPLE
Trigger: CTCCAGTGGTTCAGCCAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAGGCTACACCTCCTGCATGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GCAAAGCGATCAGACCACTGGCTGAACCACTGGAGATaGAACTGTGGGAAGGGAGAGCCAGGTGATGTCTTC +
Preference number: 3 (lower is better)
Translates to: AKRSDHWLNHWR*NCGKGEPGDVF
Trigger: GAAGACATCACCTGGCTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GCCACATGGACAGCCCCTGGATGTTTGCTCTGCCAGTaGGGTAAGGAAGATCCCTGGGGGAGTTTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: ATWTAPGCLLCQ*GKEDPWGSLEK
Trigger: TTTTTCCAAACTCCCCCAGGGATCTTCCTTACCCCACTGGCAGAGCAAACATCCAGGGGCTGTCCATGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp TCCCCACACGTCGGCTCGCTGAGCCATTGTCTGTTGTaGTACCCTGGAGTTGCTGGTTGCTATGGTAACTCA +
Preference number: 3 (lower is better)
Translates to: SPHVGSLSHCLL*YPGVAGCYGNS
Trigger: TGAGTTACCATAGCAACCAGCAACTCCAGGGTACCACAACAGACAATGGCTCAGCGAGCCGACGTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CCCCACCGGCTCTATGGGGGAATTATGGAATTGTGCTaGATAGTGGCCATGCAGGAGACACTGCTCACGCTT +
Preference number: 3 (lower is better)
Translates to: PHRLYGGIMELC*IVAMQETLLTL
Trigger: AAGCGTGAGCAGTGTCTCCTGCATGGCCACTATCCAGCACAATTCCATAATTCCCCCATAGAGCCGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATTTCTAGGCACACATTaGCCTGCCTGGCTAAAATCG +
Preference number: 3 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLFLGTH*PAWLKS
Trigger: CGATTTTAGCCAGGCAGGCAAATGTGTGCCTAGAAA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp TTCTTCTCACAGCTGCAAAGCGATCAGACCACTGGCTaGACCACTGGAGATGGAACTGTGGGAAGGGAGAGC +
Preference number: 3 (lower is better)
Translates to: FFSQLQSDQTTG*TTGDGTVGRES
Trigger: GCTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp AGGTTTCCTGTCAAGAGCATGCCACCCTTAGCACCATaGGGAGAGGTTTGCAGAGTGTCCCAGCCTCATTCG +
Preference number: 3 (lower is better)
Translates to: RFPVKSMPPLAP*GEVCRVSQPHS
Trigger: CGAATGAGGCTGGGACACTCTGCAAACCTCTCCTCATGGTGCTAAGGGTGGCATGCTCTTGACAGGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp TGCAATCCTGGCGGAGGGAAAGCTTGGGTCTTCCCATaGCCCATCCCTCACAGAGCCTCCTTAAAGTTTGAG +
Preference number: 3 (lower is better)
Translates to: CNPGGGKAWVFP*PIPHRASLKFE
Trigger: CTCAAACTTTAAGGAGGCTCTGTGAGGGATGGGTCATGGGAAGACCCAAGCTTTCCCTCCGCCAGGATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp GAGGCTGGGATGGTTCTGAGCACTGAGTTAATTACATaGTGCTGCAGTACGGTGGGCTCCATCCTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: EAGMVLSTELIT*CCSTVGSILSA
Trigger: GGCAGAGAGGATGGAGCCCACCGTACTGCAGCATCATGTAATTAACTCAGTGCTCAGAACCATCCCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 72 bp ATGGGCCTGGCCATTCTTGGACTAACTGAGGGTCAGTaGCTTGGTCCAATCGTGTTGGCAGAGCAACTGGAA +
Preference number: 3 (lower is better)
Translates to: MGLAILGLTEGQ*LGPIVLAEQLE
Trigger: TTCCAGTTGCTCTGCCAACACGATTGGACCAAGCCACTGACCCTCAGTTAGTCCAAGAATGGCCAGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GCCTTTCTTCTCACAGCTGCAAAGCGATCAGACCACTaGCTGAACCACTGGAGATGGAACTGTGGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: AFLLTAAKRSDH*LNHWRWNCGKG
Trigger: TCCCTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp TGGGTGCAGGGATCATGCTGCCATTGGAATGTACCTTaGCCTGTGGGACACTTGGGTTATCCACTGTTCCCA +
Preference number: 3 (lower is better)
Translates to: WVQGSCCHWNVP*PVGHLGYPLFP
Trigger: TGGGAACAGTGGATAACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp TCTTGCAGTGGAGGTCATTTGGGAAGTCATTGCTTGTaGATCCTCGGATGGGGACCCATAGGGCCTTGGCTA +
Preference number: 3 (lower is better)
Translates to: SCSGGHLGSHCL*ILGWGPIGPWL
Trigger: TAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CAGATGAGCACGTGTATCCCATCTTCGTCCTGTGCCTaGATTGCGGCTGACTTCTGTGCACGAAAGTGTTCC +
Preference number: 3 (lower is better)
Translates to: QMSTCIPSSSCA*IAADFCARKCS
Trigger: GGAACACTTTCGTGCACAGAAGTCAGCCGCAATCCAGGCACAGGACGAAGATGGGATACACGTGCTCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACTGAGGGTCAGTGGCTaGGTCCAATCGTGTTGGCAG +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELRVSG*VQSCWQ
Trigger: CTGCCAACACGATTGGACCAAGCCACTGACCCTCAG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGATAGATGCTTTCTCTaGACAGCACTCAGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHDRCFL*TALRAL
Trigger: CAGAGCCCTGAGTGCTGTCAAGAGAAAGCATCTATC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGGTTGGCTGGCATTTaGGGCTGTCTCCGTGAGGCT +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERLAGI*GCLREA
Trigger: AGCCTCACGGAGACAGCCCAAAATGCCAGCCAACCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGACCCCTTGAAGGCCTaGAAGAGCTGGCTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: FPNERSGHLGFLSRACHPDPLKA*KSWLGL
Trigger: CAGCCCCAGCCAGCTCTTCAAGGCCTTCAAGGGGTC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp ATAACCTGCCCTACCTCCTTCAACGGCTTCTCTATGTaGCTCAAAGACCCCTGCCGGTTCCTTAAACCACCC +
Preference number: 3 (lower is better)
Translates to: ITCPTSFNGFSM*LKDPCRFLKPP
Trigger: GGGTGGTTTAAGGAACCGGCAGGGGTCTTTGAGTCACATAGAGAAGCCGTTGAAGGAGGTAGGGCAGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GATTCTTCTTGCAGTGGAGGTCATTTGGGAAGTCATTaGTTGTGGATCCTCGGATGGGGACCCATAGGGCCT +
Preference number: 3 (lower is better)
Translates to: DSSCSGGHLGSH*LWILGWGPIGP
Trigger: AGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp AGCCATTGTCTGTTGTGGTACCCTGGAGTTGCTGGTTaGTATGGTAACTCAGCAGGACCCTGCTGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: SHCLLWYPGVAG*YGNSAGPCWKR
Trigger: TCTCTTCCAGCAGGGTCCTGCTGAGTTACCATAGCAACCAGCAACTCCAGGGTACCACAACAGACAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp AAGGACTTGGGGTGGCAGGACATGAGCTATGATGTATaGCTGGGGTCACAGGGAGGTAGATGTGTCTCATCT +
Preference number: 3 (lower is better)
Translates to: KDLGWQDMSYDV*LGSQGGRCVSS
Trigger: AGATGAGACACATCTACCTCCCTGTGACCCCAGCCATACATCATAGCTCATGTCCTGCCACCCCAAGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 72 bp CACACACACACACACACACACACTGGCCAGGCGACTTaGCTGCAGAAGTGGACAGATGAGCATAAGGTTATC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTGQAT*LQKWTDEHKVI
Trigger: GATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTACAGGGACTAGGCTGTaGGCCCCAGCCGTCTATGGA +
Preference number: 3 (lower is better)
Translates to: FPNERSGHLGFLSRACHPTGTRL*APAVYG
Trigger: TCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTGT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTACCAGGGACCTGGTaGCATGGGGGAGGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVPGTW*HGGGGD
Trigger: ATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACTGAGGGTCAGTGGCTaGGTCCAATCGTGTTGGCAG +
Preference number: 3 (lower is better)
Translates to: LEVESPRCTLHFTLTLDELRVSG*VQSCWQ
Trigger: CTGCCAACACGATTGGACCAAGCCACTGACCCTCAG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTAAGATGTTTCTCCTaGTCTCCCATAGTGGTGAAC +
Preference number: 3 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLRCFS*SPIVVN
Trigger: GTTCACCACTATGGGAGACAAGGAGAAACATCTTAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTACAGCCCCTGGATGTTaGCTCTGCCAGTGGGGTAAG +
Preference number: 3 (lower is better)
Translates to: FPNERSGHLGFLSRACHPTAPGC*LCQWGK
Trigger: CTTACCCCACTGGCAGAGCAAACATCCAGGGGCTGT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCATTGGAATGTACCTaGGCCTGTGGGACACTTGGG +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPLECT*ACGTLG
Trigger: CCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCTCTCCTCATCCCCTaGGAAGTCATAGGTTTTGCT +
Preference number: 3 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPLLIP*EVIGFA
Trigger: AGCAAAACCTATGACTTCCAAGGGGATGAGGAGAGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp AGCATAGACATCAAAGCGGGTGGGAATGGAATAAAGTaGGGCTCCCGCAACCCAGGATTTTCAGCCTACCTG +
Preference number: 3 (lower is better)
Translates to: SIDIKAGGNGIK*GSRNPGFSAYL
Trigger: CAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCACCCGCTTTGATGTCTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp GTGTATCCCATCTTCGTCCTGTGCCTGGATTGCGGCTaGCTTCTGTGCACGAAAGTGTTCCTTAGTCCTGTT +
Preference number: 3 (lower is better)
Translates to: VYPIFVLCLDCG*LLCTKVFLSPV
Trigger: AACAGGACTAAGGAACACTTTCGTGCACAGAAGTCAGCCGCAATCCAGGCACAGGACGAAGATGGGATACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp TGGGTGCTCTCCTGGACCAGATGCCAACAGAGCTTTTaGACATATGATCAGCTCATCAGGCACTGTTGGCTT +
Preference number: 3 (lower is better)
Translates to: WVLSWTRCQQSF*TYDQLIRHCWL
Trigger: AAGCCAACAGTGCCTGATGAGCTGATCATATGTGCAAAAGCTCTGTTGGCATCTGGTCCAGGAGAGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR GCA 72 bp TGCCTCCAGAATATGGACAGTGAGACACAGAGGGGTTaGCTGCTCTCACTAAATCTCCAGCTTTGGGACTCA +
Preference number: 3 (lower is better)
Translates to: CLQNMDSETQRG*LLSLNLQLWDS
Trigger: TGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTCTCACTGTCCATATTCTGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 72 bp CAGAGAGCCAAGCATAGACATCAAAGCGGGTGGGAATaGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTC +
Preference number: 3 (lower is better)
Translates to: QRAKHRHQSGWE*NKVRLPQPRIF
Trigger: GAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCACCCGCTTTGATGTCTATGCTTGGCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp AGCTGCATAGACCAAGTCTACTTGCTTTTGCAATCCTaGCGGAGGGAAAGCTTGGGTCTTCCCATGACCCAT +
Preference number: 3 (lower is better)
Translates to: SCIDQVYLLLQS*RRESLGLPMTH
Trigger: ATGGGTCATGGGAAGACCCAAGCTTTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTTGGTCTATGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACTCCTCATTCGTTATTaGCACCCTGCTGCTGACATG +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELLIRY*HPAADM
Trigger: CATGTCAGCAGCAGGGTGCAAATAACGAATGAGGAG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAGGTTGGCTGGCATTTaGGGCTGTCTCCGTGAGGCT +
Preference number: 3 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSRLAGI*GCLREA
Trigger: AGCCTCACGGAGACAGCCCAAAATGCCAGCCAACCT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCATCAGCTCGACTCTTaGTCCCTCCCAGATCTGACA +
Preference number: 3 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLHQLDS*SLPDLT
Trigger: TGTCAGATCTGGGAGGGACAAAGAGTCGAGCTGATG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGGGTACGGGATAAGTaGGAGGGGAAGGTAAGGAAG +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLRVRDK*EGKVRK
Trigger: CTTCCTTACCTTCCCCTCCAACTTATCCCGTACCCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGGACCCATAGGGCCTaGGCTAGACGAGGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGTHRA*ARRGSS
Trigger: GGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTGGGAGGTTTGTCCTaGACTGATAACAATACTGGC +
Preference number: 3 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVGGLS*TDNNTG
Trigger: GCCAGTATTGTTATCAGTCAAGGACAAACCTCCCAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTCTTTCCCTCACTGCTaGGCTGTCTGTGAGGTGGGA +
Preference number: 3 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSFPHC*AVCEVG
Trigger: TCCCACCTCACAGACAGCCAAGCAGTGAGGGAAAGA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp AAAGAGAGAGAAACAGCGCTGCTCAGGGGATGCTGCTaGTGCCAGTCGGAACTTGCACTTGGTAAAGATGAT +
Preference number: 3 (lower is better)
Translates to: KERETALLRGCC*CQSELALGKDD
Trigger: ATCATCTTTACCAAGTGCAAGTTCCGACTGGCATCAGCAGCATCCCCTGAGCAGCGCTGTTTCTCTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp ACTGCTTGGCTGTCTGTGAGGTGGGAGGTTTGTCCTTaGCTGATAACAATACTGGCCCTTTGCTCGGTTAAG +
Preference number: 3 (lower is better)
Translates to: TAWLSVRWEVCP*LITILALCSVK
Trigger: CTTAACCGAGCAAAGGGCCAGTATTGTTATCAGTCAAGGACAAACCTCCCACCTCACAGACAGCCAAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp AGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTaGATCACCTCACTACCTCTGCCAATACAAACAGAA +
Preference number: 3 (lower is better)
Translates to: SEAPATQDFQPT*ITSLPLPIQTE
Trigger: TTCTGTTTGTATTGGCAGAGGTAGTGAGGTGATTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GAGCCATGGAGATGGCTGGAGGTAGAATCTCCTAGATaGACTCTGCATTTCACGTTGACCCTTGATGAAGGT +
Preference number: 3 (lower is better)
Translates to: EPWRWLEVESPR*TLHFTLTLDEG
Trigger: ACCTTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAGCCATCTCCATGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CACACACACACTGGCCAGGCGACTTGGCTGCAGAAGTaGACAGATGAGCATAAGGTTATCCTACCATATATC +
Preference number: 3 (lower is better)
Translates to: HTHTGQATWLQK*TDEHKVILPYI
Trigger: GATATATGGTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAGTGTGTGTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 72 bp CTCCTGATTCATTCCCTCCCACAGGCCAGGAACCTGTaGCACACCCTAAAGAGAATTACACTGTTGTGTATC +
Preference number: 3 (lower is better)
Translates to: LLIHSLPQARNL*HTLKRITLLCI
Trigger: GATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGGTTCCTGGCCTGTGGGAGGGAATGAATCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATTCTGGTCAGCTCCCTaGCCATGGGCCTGGCCATTC +
Preference number: 3 (lower is better)
Translates to: LFPFLPLCYISATRIQMKFWSAP*PWAWPF
Trigger: GAATGGCCAGGCCCATGGCAAGGGAGCTGACCAGAA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCATCAGCTCGACTCTTaGTCCCTCCCAGATCTGACA +
Preference number: 3 (lower is better)
Translates to: FPNERSGHLGFLSRACHPHQLDS*SLPDLT
Trigger: TGTCAGATCTGGGAGGGACAAAGAGTCGAGCTGATG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCTCTTCCCATTAGGTaGCTCATGTCTTTTCCACCA +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPLPIR*LMSFPP
Trigger: TGGTGGAAAAGACATGAGCAACCTAATGGGAAGAGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCACCTGGTACTGCACTaGCCAAAACCTTTGGTTATT +
Preference number: 3 (lower is better)
Translates to: EALFLLKAANTRLSKDRMHLVLH*PKPLVI
Trigger: AATAACCAAAGGTTTTGGCAAGTGCAGTACCAGGTG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACAGGGCCTGGAGGCCTaGTTCCTGCTCAAAGCAGCC +
Preference number: 3 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQQGLEA*FLLKAA
Trigger: GGCTGCTTTGAGCAGGAACAAGGCCTCCAGGCCCTG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp GATGAAATCATTCCCAAAGAGGTCTGGACAGCCCAGTaGCAAAGTCATCTGCATAGCAATGGCACCGGATTC +
Preference number: 3 (lower is better)
Translates to: DEIIPKEVWTAQ*QSHLHSNGTGF
Trigger: GAATCCGGTGCCATTGCTATGCAGATGACTTTGTCACTGGGCTGTCCAGACCTCTTTGGGAATGATTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp TGTCTTCCCAGTAAAGATAATACTGAAGTCCTTCCTTaGCTCTTCCCTAGGCCAAGGCTCAGACCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: CLPSKDNTEVLP*LFPRPRLRPKQ
Trigger: CTGCTTTGGTCTGAGCCTTGGCCTAGGGAAGAGGCAAGGAAGGACTTCAGTATTATCTTTACTGGGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp CTTTCAAAGTCCTTGCTTTACCCATCCCTATGCAGGTaGACATGGCCTGTTACAAACCTCTGCCTCCAGAAT +
Preference number: 3 (lower is better)
Translates to: LSKSLLYPSLCR*TWPVTNLCLQN
Trigger: ATTCTGGAGGCAGAGGTTTGTAACAGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR GCA 72 bp TCAACTCTTTCAAAGTCCTTGCTTTACCCATCCCTATaGAGGTGCACATGGCCTGTTACAAACCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: STLSKSLLYPSL*RCTWPVTNLCL
Trigger: GAGGCAGAGGTTTGTAACAGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR GCA 72 bp TTGGACCAGTTAGAATTCCCAACAGCCATGCTTCAATaGACACAGAGCCAGTTTCACATGGAACTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: LDQLEFPTAMLQ*TQSQFHMELLG
Trigger: TCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGTTGGGAATTCTAACTGGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCAAGGCCAAGGTCATTaGTATGTCCCTCTTCTTAAT +
Preference number: 3 (lower is better)
Translates to: EALFLLKAANTRLSKDRMQGQGH*YVPLLN
Trigger: ATTAAGAAGAGGGACATACAAATGACCTTGGCCTTG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTTTCTAGGCACACATTaGCCTGCCTGGCTAAAATCG +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLFLGTH*PAWLKS
Trigger: CGATTTTAGCCAGGCAGGCAAATGTGTGCCTAGAAA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGATGCTCCATGGACTTaGCTGGAAATGGTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDAPWT*LEMVWF
Trigger: AAACCACACCATTTCCAGCAAAGTCCATGGAGCATC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACAAGGCCAAGGTCATTaGTATGTCCCTCTTCTTAAT +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEQGQGH*YVPLLN
Trigger: ATTAAGAAGAGGGACATACAAATGACCTTGGCCTTG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTAAGATGTTTCTCCTaGTCTCCCATAGTGGTGAAC +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLRCFS*SPIVVN
Trigger: GTTCACCACTATGGGAGACAAGGAGAAACATCTTAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCTGTGACTGACTTCTaGGGAGGGAATAAAATGATC +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPVTDF*GGNKMI
Trigger: GATCATTTTATTCCCTCCCAAGAAGTCAGTCACAGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGTGAGGTGGGAGGTTaGTCCTTGACTGATAACAAT +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLCEVGG*SLTDNN
Trigger: ATTGTTATCAGTCAAGGACAAACCTCCCACCTCACA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR TCA 72 bp CTTCTGTGCACGAAAGTGTTCCTTAGTCCTGTTTGGTaGAGTGGTCTCGGTTTCTTAAGCGTCCTTTGGGTT +
Preference number: 3 (lower is better)
Translates to: LLCTKVFLSPVW*SGLGFLSVLWV
Trigger: AACCCAAAGGACGCTTAAGAAACCGAGACCACTTCACCAAACAGGACTAAGGAACACTTTCGTGCACAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp CTACACCTGGGGCAGACACACACACACACATACATGTaGTCACACACATGTGCACATATTCATATCCAAAGG +
Preference number: 3 (lower is better)
Translates to: LHLGQTHTHTYM*SHTCAHIHIQR
Trigger: CCTTTGGATATGAATATGTGCACATGTGTGTGAGCACATGTATGTGTGTGTGTGTGTCTGCCCCAGGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGGCAAGGACAGCTTTTaGACAATGTTGCTTGTCTTT +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLGKDSF*TMLLVF
Trigger: AAAGACAAGCAACATTGTCAAAAAGCTGTCCTTGCC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTACCACTCTGTTTCTaGTCTTCCTCTACTTATTCC +
Preference number: 3 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLPLCF*SSSTYS
Trigger: GGAATAAGTAGAGGAAGACAAGAAACAGAGTGGTAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCATTGGAATGTACCTaGGCCTGTGGGACACTTGGG +
Preference number: 3 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPLECT*ACGTLG
Trigger: CCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATGCTCGGTTAAGTATTaGACTTCACATTACTGTGTC +
Preference number: 3 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPECSVKY*TSHYCV
Trigger: GACACAGTAATGTGAAGTCAAATACTTAACCGAGCA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp TTTCTAGGCACACATTTGCCTGCCTGGCTAAAATCGTaGATCTGTAGATGTAAGAACAGATGGGGAGATGGA +
Preference number: 3 (lower is better)
Translates to: FLGTHLPAWLKS*ICRCKNRWGDG
Trigger: TCCATCTCCCCATCTGTTCTTACATCTACAGATGCACGATTTTAGCCAGGCAGGCAAATGTGTGCCTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CTGTGGGTAACTCCTGCTTCTTCCTGGGAACAGTCCTaGACAGTCTGCCTCAAACTTTGGGATTTATTTAAA +
Preference number: 3 (lower is better)
Translates to: LWVTPASSWEQS*TVCLKLWDLFK
Trigger: TTTAAATAAATCCCAAAGTTTGAGGCAGACTGTCCAGGACTGTTCCCAGGAAGAAGCAGGAGTTACCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp CAGCCATGCTTCAATGCACACAGAGCCAGTTTCACATaGAACTCCTGGGACGTATTTCTGAACAACTGTTTA +
Preference number: 3 (lower is better)
Translates to: QPCFNAHRASFT*NSWDVFLNNCL
Trigger: TAAACAGTTGTTCAGAAATACGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR GCA 72 bp ATATCCAAAGGGGCAAGTGTTCTTAAAAGTACCGGATaGTCCATGGACTTTGCTGGAAATGGTGTGGTTTCT +
Preference number: 3 (lower is better)
Translates to: ISKGASVLKSTG*SMDFAGNGVVS
Trigger: AGAAACCACACCATTTCCAGCAAAGTCCATGGAGCATCCGGTACTTTTAAGAACACTTGCCCCTTTGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp GAAGATAATTTTTATAAGCAAGATGGGCTGTGGCTCTaGATACCTGGCTCAAATTTCTCAGTCCCCAAGCAG +
Preference number: 3 (lower is better)
Translates to: EDNFYKQDGLWL*IPGSNFSVPKQ
Trigger: CTGCTTGGGGACTGAGAAATTTGAGCCAGGTATCCAGAGCCACAGCCCATCTTGCTTATAAAAATTATCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp ACTGTTTATAATGCTTTTCAACTCTTTCAAAGTCCTTaGTTTACCCATCCCTATGCAGGTGCACATGGCCTG +
Preference number: 3 (lower is better)
Translates to: TVYNAFQLFQSP*FTHPYAGAHGL
Trigger: CAGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGTTGAAAAGCATTATAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CCA 72 bp GTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTaGTGGTTCTTAGCAACAGAACAAATCTACAGCACT +
Preference number: 3 (lower is better)
Translates to: VVYPPGTIRGLV*WFLATEQIYST
Trigger: AGTGCTGTAGATTTGTTCTGTTGCTAAGAACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGACAAGAAATCCTTTaGAGCTTTCCGCCTACACCT +
Preference number: 3 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGQEIL*SFPPTP
Trigger: AGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCATTTGGGAAGTCATaGCTTGTGGATCCTCGGATG +
Preference number: 3 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSFGKS*LVDPRM
Trigger: CATCCGAGGATCCACAAGCAATGACTTCCCAAATGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCTGTGACTGACTTCTaGGGAGGGAATAAAATGATC +
Preference number: 3 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPVTDF*GGNKMI
Trigger: GATCATTTTATTCCCTCCCAAGAAGTCAGTCACAGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR GCA 72 bp GTAACCAGATTAGCACCAGTCGCTAATTTTACATCTTaGCTTCATACACTCTTGACTACACTTTATTTCCCA +
Preference number: 3 (lower is better)
Translates to: VTRLAPVANFTS*LHTLLTTLYFP
Trigger: TGGGAAATAAAGTGTAGTCAAGAGTGTATGAAGGCAAGATGTAAAATTAGCGACTGGTGCTAATCTGGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR GCA 72 bp AGGATTTTCAGCCTACCTGAATCACCTCACTACCTCTaGCAATACAAACAGAAAGTTCTTTTTGTATATGAA +
Preference number: 3 (lower is better)
Translates to: RIFSLPESPHYL*QYKQKVLFVYE
Trigger: TTCATATACAAAAAGAACTTTCTGTTTGTATTGGCAGAGGTAGTGAGGTGATTCAGGTAGGCTGAAAATCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CCA 72 bp ACCATATATCAGGCCCAAGAGATAACTATATTCCGATaGGAGAATCAGTTAGTTTCACTGACATATACAAGT +
Preference number: 3 (lower is better)
Translates to: TIYQAQEITIFR*ENQLVSLTYTS
Trigger: ACTTGTATATGTCAGTGAAACTAACTGATTCTCCCATCGGAATATAGTTATCTCTTGGGCCTGATATATGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATGGCGCAGGGTGCACTaGCCTGGGCCCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGWRRVH*PGPWHQ
Trigger: CTGGTGCCAGGGCCCAGGCCAGTGCACCCTGCGCCA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCGAGGGCGGGCGCCTaGCAGGTCATCTCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGARAGA*QVISVA
Trigger: CGCTACTGAGATGACCTGTCAGGCGCCCGCCCTCGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACAGGGTGCACTGGCCTaGGCCCTGGCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGQGALA*ALAPAT
Trigger: TGTGGCTGGTGCCAGGGCCCAGGCCAGTGCACCCTG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGGGTCCCTCCGGACATaGGCCCCCGGCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLGSLRT*APGWAS
Trigger: TGAAGCCCAGCCGGGGGCCCATGTCCGGAGGGACCC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCGATGGCGGGCAGGCTaGGCGGGCTGTCCGGGGCAA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRWRAG*AGCPGQ
Trigger: TTGCCCCGGACAGCCCGCTCAGCCTGCCCGCCATCG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGACTCCAAGGGTCCTaGCAAGCACGGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGLQGS*QARPPL
Trigger: AAGCGGGGGCCGTGCTTGGCAGGACCCTTGGAGTCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGAGGGCGTTGCCCCTaGGTCCATCCACCCGGATCT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGGRCP*VHPPGS
Trigger: AGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAACGAAGCCTGCATGCTaGCTGGGCTTGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTTKPAC*LGLASP
Trigger: GGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAACGAAGCCTGCATGCTaGCTGGGCTTGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGTKPAC*LGLASP
Trigger: GGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCACCACCAGGTGATTaGAACCCTCGGCGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPPPGD*NPRRAL
Trigger: GAGAGCCCGCCGAGGGTTTCAATCACCTGGTGGTGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCACGCCAGCAACCTTaGCATGGGAGGCGATGTCGC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPRQQP*HGRRCR
Trigger: GCGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGAGCAGCTGGACATCTaGCACGGTCACGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTEQLDI*HGHGAR
Trigger: CCGTGCACCGTGACCGTGTCAGATGTCCAGCTGCTC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCAGCCGCTTCAGCGTaGGGTCACTTTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGAAASA*GHFRGT
Trigger: AGTCCCGCGAAAGTGACCTCACGCTGAAGCGGCTGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGATCATAGGTGTCCGTaGGCGGAGGCTGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGDHRCP*AEAVGA
Trigger: AGCCCCGACAGCCTCCGCTCACGGACACCTATGATC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGAGCCTGCGGGGCTTaGCAGCTTCTCTTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRACGA*QLLLRR
Trigger: ACGCCGCAAGAGAAGCTGTCAAGCCCCGCAGGCTCT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACCTCCTCTGAACGTGTaGGTGTGCGCGCGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGPPLNV*VCARVA
Trigger: AGCCACACGCGCGCACACGCACACGTTCAGAGGAGG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCGGGGTCCACCACCTaGACCGTCTCATACTGGAGG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPGSTT*TVSYWR
Trigger: CCTCCAGTATGAGACGGTGCAGGTGGTGGACCCCGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGTGCTGGCGCAGGGTaGACTGGCCTGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSAGAG*TGLGPG
Trigger: GCCAGGGCCCAGGCCAGTGCACCCTGCGCCAGCACT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGAGGCTGTCGGGGCTaGCCGTGTACCGGATCATGT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGGCRG*PCTGSC
Trigger: ACATGATCCGGTACACGGGCAGCCCCGACAGCCTCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACTGGGACAGCGGGGCTaGCTGCCGGGTGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLLGQRG*LPGEQS
Trigger: ACTTTGCTCACCCGGCAGCCAGCCCCGCTGTCCCAG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAATGACCGCTGCTTCTaGGACAGCGGGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTNDRCF*DSGAGC
Trigger: GCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAACCTGCGGGGCTCCTTaGACCGCTCACACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLTCGAP*TAHTAP
Trigger: AGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGCCTGCATGCTGGCTaGGCTTGGCCTCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSLHAG*AWPPPS
Trigger: AGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGCCTGCATGCTGGCTaGGCTTGGCCTCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSLHAG*AWPPPS
Trigger: AGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGTCCTGGTGGATCTTaGCCCTGTCCACCTGCACCG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGPGGS*PCPPAP
Trigger: CGGTGCAGGTGGACAGGGCCAAGATCCACCAGGACC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATCAGCAGGACCCTGCTaGAAGAGATGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSAGPC*KRWAGP
Trigger: GGGGCCAGCCCATCTCTTCCAGCAGGGTCCTGCTGA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACAATGCAGTCTCCCCTaGACGCGCCGCGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGQCSLP*TRRVSL
Trigger: GAGGGAAACGCGGCGCGTCCAGGGGAGACTGCATTG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCTCTCGCCCTCCTCTaGACGTGTGCGTGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPLALL*TCACAR
Trigger: GCGCGCACACGCACACGTTCAGAGGAGGGCGAGAGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGCGGGAGCGCCGCATTaGCACTGCAGATGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLAGAPH*HCRWSL
Trigger: TAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGGCTGGCTGCCGGGTaGGCAAAGTGGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGLAAG*AKWRSP
Trigger: TGGGCTCCTCCACTTTGCTCACCCGGCAGCCAGCCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAAGGCTCCCCCAGCTTaGAGAGGTCCTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGKAPPA*RGPPAS
Trigger: TGAGGCTGGAGGACCTCTTCAAGCTGGGGGAGCCTT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGTCCCTGTCCTCCGTaGAGACGGGAATTCCACGCA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGPCPP*RREFHA
Trigger: TGCGTGGAATTCCCGTCTTCACGGAGGACAGGGACC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGTTCAGCTTCACGTTaGCCCCAGCCACAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSSASR*PQPQAG
Trigger: TCCCGCCTGTGGCTGGGGGCAACGTGAAGCTGAACT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGAGGCCGCCAGCCACTaGGATGCTGACGATGGCGGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHEAASH*DADDGG
Trigger: CCCGCCATCGTCAGCATCGCAGTGGCTGGCGGCCTC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGCTCACTTACCAGGCTaGGGGTGCACAAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTAHLPG*GCTRGR
Trigger: CCTACCCCTTGTGCACCCGCAGCCTGGTAAGTGAGC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCCACCATGAGGAGGTaGGAGAGAAGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPTMRR*ERRQVQ
Trigger: CTGGACCTGCCTTCTCTCCCACCTCCTCATGGTGGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCTGCTCCTTGGTGGTaGAGCCTGGTGGAGACACCA +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPAPWW*SLVETP
Trigger: TGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGGGCAGGGCAGTGCTaGCGCAGGGTGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHWAGQC*RRVHWP
Trigger: AGGCCAGTGCACCCTGCGCCAGCACTGCCCTGCCCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACACCACGGAACCATCTaGCACCTGGTAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGHHGTI*HLVVGQ
Trigger: CTGGCCCACTACCAGGTGCCAGATGGTTCCGTGGTG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAACCTTCACTGCTGGTaGGCGCAGGTAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGNLHCW*AQVAGP
Trigger: AGGCCCAGCTACCTGCGCCCACCAGCAGTGAAGGTT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGACCCATAGGGCCTTaGCTAGACGAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGPIGP*LDEGAP
Trigger: AGGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGGGTAGGTCTTCTCTaGGGGTCAGGTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGVGLL*GSGELL
Trigger: CAGGAGCTCACCTGACCCCCAGAGAAGACCTACCCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCCCACCTCAGGGCCTaGAGGCCTTGTTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSHLRA*RPCSCS
Trigger: TGAGCAGGAACAAGGCCTCCAGGCCCTGAGGTGGGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp TTGCTTGTGGATCCTCGGATGGGGACCCATAGGGCCTaGGCTAGACGAGGGAGCTCCTACAGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLVDPRMGTHRA*ARRGSSYSQEG
Trigger: GCCTTCCTGGCTGTAGGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp GCAGGGGAAGTTCCCGGAGAGGGGCTTCTCTGGGCCTaGTGCCTGCAGAGCACCTTCCTACCTATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGEVPGEGLLWA*CLQSTFLPMSV
Trigger: GACAGACATAGGTAGGAAGGTGCTCTGCAGGCACAAGGCCCAGAGAAGCCCCTCTCCGGGAACTTCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTCCACCACCAGGTGATTaGAACCCTCGGCGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CCSTVGSILSALCMHTHLPPPGD*NPRRAL
Trigger: GAGAGCCCGCCGAGGGTTTCAATCACCTGGTGGTGG...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCATCCACCACCAGGTaGTTGAAACCCTCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSSTTR*LKPSAG
Trigger: GCCCGCCGAGGGTTTCAATCACCTGGTGGTGGATGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCAGGTTGGTGCCTGTaGTGGTCACTTGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSGWCL*WSLGSL
Trigger: GAGGGACCCAAGTGACCATCACAGGCACCAACCTGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACGATGGCGGGCAGGCTaGGCGGGCTGTCCGGGGCAA +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERWRAG*AGCPGQ
Trigger: TTGCCCCGGACAGCCCGCTCAGCCTGCCCGCCATCG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGCATTGTCTGGGCTaGCACAGCTCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLWHCLG*HSSGPG
Trigger: CCCTGGTCCTGAGCTGTGTCAGCCCAGACAATGCCA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCCTTCCAGGTCCTGTaGCTGACTTCTTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGAFQVL*LTSWEG
Trigger: TCCCTCCCAAGAAGTCAGTCACAGGACCTGGAAGGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGAGACACGGTGGAATaGGGAGGGACAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGRDTVE*GGTGRM
Trigger: CATCCTCCCTGTCCCTCCTCATTCCACCGTGTCTCT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGGGGAAGAGGCCCTTaGTGTAGACGAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRGRGP*CRRGPG
Trigger: TCCTGGTCCTCGTCTACATCAAGGGCCTCTTCCCCT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCCAGGACTCAGCAATaGAGTCTCCCCTACTGGACG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGARTQQ*SLPYWT
Trigger: CGTCCAGTAGGGGAGACTGCATTGCTGAGTCCTGGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321063.8
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCCGGCCCTGTCTCATaGGTCACCAAGACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSGPVS*VTKTFR
Trigger: CCTGAAGGTCTTGGTGACGCATGAGACAGGGCCGGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGGTACTCCACCCCACTaGGCTCACAGCCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLGTPPH*AHSQWA
Trigger: TGCCCATTGGCTGTGAGCGCAGTGGGGTGGAGTACC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACGGGTGCAAGTGTTGTaGAGCACACACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRVQVL*STHQPQ
Trigger: CTGTGGCTGGTGTGTGCTGCACAACACTTGCACCCG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGGGCACCTCCTTGGCTaGAGGGGAGTAGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLGHLLG*RGVALD
Trigger: ATCCAGTGCTACTCCCCTGCAGCCAAGGAGGTGCCC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGGGCTGGCTTTGGGTaGAGGGATCATGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGAGFG*RDHAAI
Trigger: AATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATGGGGGAGGTGGAGATaGTGGGCCAGTACATCAACC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTWGRWR*WASTST
Trigger: GGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCGTGTGCGCGCGTGTaGCTGCCTCCTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMACARV*LPPPAP
Trigger: TGGGGCTGGAGGAGGCAGCCACACGCGCGCACACGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCCAGTTCCAGGGCATaGCTTTCATGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSSSRA*LSWQRR
Trigger: CCGCCTCTGCCATGAAAGCCATGCCCTGGAACTGGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTTGGTGGTGGAGCCTaGTGGAGACACCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLGGGA*WRHHLR
Trigger: CCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCATATCCCGGAGGACTaGGCCGGGGTCCACCACCTG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHHIPED*AGVHHL
Trigger: CAGGTGGTGGACCCCGGCCCAGTCCTCCGGGATATG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACCTGTGATGGTCACTTaGGTCCCTCCGGACATGGGC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLPVMVT*VPPDMG
Trigger: GCCCATGTCCGGAGGGACCCAAGTGACCATCACAGG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAAGACCAGGTCCTGGTaGATCTTGGCCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGKTRSW*ILALST
Trigger: GGTGGACAGGGCCAAGATCCACCAGGACCTGGTCTT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGACTCGCAGAGCAGCTaGACATCTGACACGGTCACG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGDSQSS*TSDTVT
Trigger: CGTGACCGTGTCAGATGTCCAGCTGCTCTGCGAGTC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCTCCAGGGCGGCCCTaGAAGGACGGTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPPGRP*KDGSQL
Trigger: CAGCTGAGAACCGTCCTTCCAGGGCCGCCCTGGAGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGCCTGGCTTTCTACTaGCGGGGGAGCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHCLAFY*RGSRQG
Trigger: GCCCTGCCTGCTCCCCCGCCAGTAGAAAGCCAGGCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAATCAACCTTCACTGCTaGTGGGCGCAGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTINLHC*WAQVAG
Trigger: CCCAGCTACCTGCGCCCACCAGCAGTGAAGGTTGAT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGTTGCATGGGGGAGGTaGAGATGCTGGGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGVAWGR*RCWAST
Trigger: TGTACTGGCCCAGCATCTCCACCTCCCCCATGCAAC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGGGACCTGGTTGCATaGGGGAGGTGGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLRDLVA*GRWRCW
Trigger: CCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAAGGCCTTGAAGAGCTaGCTGGGGCTGCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLKALKS*LGLLTG
Trigger: CCCAGTGAGCAGCCCCAGCCAGCTCTTCAAGGCCTT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGGCACGGAGCTGCCTaGGGTAGGTCTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGHGAA*GRSSLG
Trigger: CCCCAGAGAAGACCTACCCCAGGCAGCTCCGTGCCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACCCTGCTGGAAGAGATaGGCTGGCCCCTACATGCTA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGPCWKR*AGPYML
Trigger: TAGCATGTAGGGGCCAGCCCATCTCTTCCAGCAGGG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCTGGGTCCTCTGGCTaGGCCAAAACCCCTGCATCA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSGSSG*AKTPAS
Trigger: TGATGCAGGGGTTTTGGCCCAGCCAGAGGACCCAGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACAACTCTGGGTCCTCTaGCTGGGCCAAAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLQLWVL*LGQNPC
Trigger: GCAGGGGTTTTGGCCCAGCCAGAGGACCCAGAGTTG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp AGACATGCAACGGGAGACACGGTACCAGGGACCTGGTaGCATGGGGGAGGTGGAGATGCTGGGCCAGTACAT +
Preference number: 4 (lower is better)
Translates to: RHATGDTVPGTW*HGGGGDAGPVH
Trigger: ATGTACTGGCCCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGATGTCCTTCACCTTaGGCCAGGCCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGCPSP*ARPGPA
Trigger: CGCTGGACCTGGCCTGGCTCAAGGTGAAGGACATCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACCACGGGCAGGTTGTTaGTCTCCATCCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGPRAGC*SPSLHR
Trigger: CCTATGAAGGGATGGAGATCAACAACCTGCCCGTGG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGTCTGGGTCAGCCTTaGGGCACAGCCCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSLGQP*GTARSS
Trigger: AGAGCTGCGGGCTGTGCCTCAAGGCTGACCCAGACT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGGGCGTGCCAGGCTTaGGCTCCAGGATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHWACQA*APGFLR
Trigger: CCTCAGGAATCCTGGAGCTCAAGCCTGGCACGCCCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACGGACGTGCGGGTCATaGATGCCATGTTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRTCGS*MPCLSA
Trigger: GGCTGATAAACATGGCATTCATGACCCGCACGTCCG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGACAGAGGCCTCTCTaGCATCTTCTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRQRPL*HLLVSS
Trigger: GGAGCTGACCAGAAGATGTCAGAGAGGCCTCTGTCT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCTCGAGGGAGGCCGTaGAGGGGCCTCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPRGRP*RGLHPT
Trigger: TGTGGGATGGAGGCCCCTTCACGGCCTCCCTCGAGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACCACCCTTAGCACCATaGGGAGAGGTTTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGPPLAP*GEVCRV
Trigger: CACTCTGCAAACCTCTCCTCATGGTGCTAAGGGTGG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAACGGCTTCTCTATGTaGCTCAAAGACCCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTNGFSM*LKDPCR
Trigger: CCGGCAGGGGTCTTTGAGTCACATAGAGAAGCCGTT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAACGGCTTCTCTATGTaGCTCAAAGACCCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGNGFSM*LKDPCR
Trigger: CCGGCAGGGGTCTTTGAGTCACATAGAGAAGCCGTT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCGGGCTGAATGTCCTTaGTGCCAAGCGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRAECP*CQAGTA
Trigger: CGCTGTGCCCGCTTGGCATCAAGGACATTCAGCCCG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCATACTGGAGGGCGTTaGCCCTGGGTCCATCCACCC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHHTGGR*PWVHPP
Trigger: GGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGAAGACAAAGCTGGTaGTGGCGAAGGTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGRRQSW*WRRSCR
Trigger: CCGGCATGACCTTCGCCAGCACCAGCTTTGTCTTCT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCGGGGAGTACTCCATaGCACCGACACGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPGSTP*HRHGPS
Trigger: TGATGGCCCGTGTCGGTGGCATGGAGTACTCCCCGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAATGTGCATCCGGGACTaGTCAGCCAGGTATGCGTTC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTMCIRD*SARYAF
Trigger: GAACGCATACCTGGCTGAGCAGTCCCGGATGCACAT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGCAGGCCACGGGGACTaGAGCAAACAGAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHAGHGD*SKQSGR
Trigger: TCTGCCGCTCTGTTTGCTGCAGTCCCCGTGGCCTGC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACAGCCCCTGGATGTTTaGTCTGCCAGTGGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLQPLDV*SASGVR
Trigger: CCTTACCCCACTGGCAGAGCAAACATCCAGGGGCTG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGAGGCGGGTCCCAGTaGCACAGCAGCACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRGGSQ*HSSTQA
Trigger: TGCCTGAGTGCTGCTGTGCCACTGGGACCCGCCTCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCCGGCTGGAGATGGTaGGAAAATACTCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSGWRW*ENTRAS
Trigger: GGAAGCCCGAGTATTTTCCCACCATCTCCAGCCGGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGTTGCTCGTGGTCCTTaGAGAAGGCCATATCCCGGA +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTVARGP*RRPYPG
Trigger: TCCGGGATATGGCCTTCTCCAAGGACCACGAGCAAC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCGGTCCCCCTCCTTCTaGTCTCCGTGCTCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRSPSF*SPCSWF
Trigger: GAACCACGAGCACGGAGACCAGAAGGAGGGGGACCG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGTTGGCTGGCATTTTaGGCTGTCTCCGTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGWLAF*AVSVRL
Trigger: AAGCCTCACGGAGACAGCCCAAAATGCCAGCCAACC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGTAAAAGCTGCATCTaGGGGGACTTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGKSCI*GDLWPG
Trigger: TCCTGGCCACAAGTCCCCCCAGATGCAGCTTTTACC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATTTAGGGGCTGGCTTTaGGTGCAGGGATCATGCTGC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGFRGWL*VQGSCC
Trigger: GCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGAAGTCATTGCTTGTaGATCCTCGGATGGGGACCC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGSHCL*ILGWGP
Trigger: GGGTCCCCATCCGAGGATCCACAAGCAATGACTTCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATGTAGACATATGCGATaGCAGACGTCATGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTCRHMR*QTSCGP
Trigger: GGGACCGCATGACGTCTGTCATCGCATATGTCTACA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGTGAGCTGCCTCTCTaGCATGATGTAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGELPL*HDVELL
Trigger: GAGCAACTCTACATCATGTCAGAGAGGCAGCTCACC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCTCAAAGGTGCAGTTaGCGCCAGCTGACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPQRCS*RQLTAP
Trigger: CGGAGCTGTCAGCTGGCGTCAACTGCACCTTTGAGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTTTGTGCCTGCCGATaGGGTTGGGGGACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLCACR*GWGTRR
Trigger: TCTGCGAGTCCCCCAACCTCATCGGCAGGCACAAAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACATTCTTGGACTAACTaGGGGTCAGTGGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGHSWTN*GSVAWS
Trigger: GGACCAAGCCACTGACCCTCAGTTAGTCCAAGAATG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGATCAGACCACTGGCTaGACCACTGGAGATGGAACT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGDQTTG*TTGDGT
Trigger: AGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACTCTGCGATGTCACATaGTGCCCTGTTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLLCDVT*CPVPRS
Trigger: GGACCTTGGAACAGGGCATCATGTGACATCGCAGAG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATTTAAAGGAAGAGGCTaGGGGTTCAAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGFKGRG*GFKASQ
Trigger: CTGGGAGGCCTTGAACCCTCAGCCTCTTCCTTTAAA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCCACCCCCGCGGGCTaGATGTCCTTGATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPTPAG*MSLMPS
Trigger: GCTTGGCATCAAGGACATTCAGCCCGCGGGGGTGGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR GCA 90 bp ATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTCCTCCTGACAGCGGGGCTGGCTaGCGGGTGAGCAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IGAHDTKCFHFLRHSPPPDSGAG*RVSKVE
Trigger: CTCCACTTTGCTCACCCGGCAGCCAGCCCCGCTGTC...AGGAGGAGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGACGTACGCGAACATaGCATCCGCCTCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGRRTRT*HPPQSS
Trigger: AGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCTTGCCACTTTTGGTaGCCACAAAGGCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGACHFW*PQRPES
Trigger: ACTCTCTGGCCTTTGTGGGCACCAAAAGTGGCAAGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGCACTGGATCTGATTaGCCACGACCAGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSTGSD*PRPAHP
Trigger: TGGATGGGCTGGTCGTGGGCAATCAGATCCAGTGCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAGTGCTGGCGCAGGGTaGACTGGCCTGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLSAGAG*TGLGPG
Trigger: GCCAGGGCCCAGGCCAGTGCACCCTGCGCCAGCACT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGCTCCTTCCCTCCATaGTTGGCACGGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHCSFPP*LARIWG
Trigger: CCCCCAGATCCGTGCCAAGCATGGAGGGAAGGAGCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCAGGGGCAGGCAATTaGTCTTCCAGGTATGGCGGA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSGAGN*SSRYGG
Trigger: TCCGCCATACCTGGAAGAGCAATTGCCTGCCCCTGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAATGTGCATCCGGGACTaGTCAGCCAGGTATGCGTTC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLMCIRD*SARYAF
Trigger: GAACGCATACCTGGCTGAGCAGTCCCGGATGCACAT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAACTGAAGTCCTTCCTTaGCTCTTCCCTAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTTEVLP*LFPRPR
Trigger: CCTTGGCCTAGGGAAGAGGCAAGGAAGGACTTCAGT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGAACAGAGATAACCTaGCCTACCTCCTTCAACGGC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGTEIT*PTSFNG
Trigger: GCCGTTGAAGGAGGTAGGGCAGGTTATCTCTGTTCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAAGGGGTGGGTAACACTTaGGGTTGTCCTCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKGVGNT*GCPRPA
Trigger: GGCCGGACGAGGACAACCCCAAGTGTTACCCACCCC...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCCGGCTGGAGATGGTaGGAAAATACTCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSGWRW*ENTRAS
Trigger: GGAAGCCCGAGTATTTTCCCACCATCTCCAGCCGGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTGGTGGTGGAGCCTGGTaGAGACACCATCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: CCSTVGSILSALCMHTHLGGGAW*RHHLRL
Trigger: CAACCTGAGATGGTGTCTCCACCAGGCTCCACCACC...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATGCGCTCACAGCCAATaGGCACCTCTACATAGGAGT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTCAHSQ*APLHRS
Trigger: ACTCCTATGTAGAGGTGCCCATTGGCTGTGAGCGCA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCACGGCCCCCGCTTTaGACAGGTAGGCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMARPPL*TGRQPA
Trigger: TGCAGGCTGCCTACCTGTCCAAAGCGGGGGCCGTGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGACAAAGCTGGTGCTaGCGAAGGTCATGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLRQSWC*RRSCRS
Trigger: AGACCGGCATGACCTTCGCCAGCACCAGCTTTGTCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCAGTGGCAGCGGTATaGACTCTCCACGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPVAAV*TLHAGQ
Trigger: CTGTCCTGCGTGGAGAGTCCATACCGCTGCCACTGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGACAGCTCCAGCCACTaGCTCTCCTGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMDSSSH*LSWAGQ
Trigger: CTGCCCTGCCCAGGAGAGCCAGTGGCTGGAGCTGTC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGCTTGGCACGGATCTaGGGGTTCTGTATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLCLARI*GFCMRS
Trigger: GGACCTCATACAGAACCCCCAGATCCGTGCCAAGCA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGTCTCCGTGCTCGTaGTTCTTCACTAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLWSPCS*FFTRCH
Trigger: GTGGCACCTAGTGAAGAACCACGAGCACGGAGACCA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACTGAACCACTGGAGATaGAACTGTGGGAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTLNHWR*NCGKGE
Trigger: CTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGGACACCAGCCCAGTaGGGGAGAAGGAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHWTPAQ*GRRSLK
Trigger: CTTGAGGCTCCTTCTCCCCCACTGGGCTGGTGTCCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAATGGGGATGGAGCCATaGAGATGGCTGGAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTMGMEP*RWLEVE
Trigger: TTCTACCTCCAGCCATCTCCATGGCTCCATCCCCAT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGAACAGATGGGGAGATaGATGCCAAGGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGEQMGR*MPRPRS
Trigger: TGACCTTGGCCTTGGCATCCATCTCCCCATCTGTTC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACACCCTGATTTCCTATaGACAAGCGCCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGHPDFL*TSALSF
Trigger: GAAGGAGAGGGCGCTTGTCCATAGGAAATCAGGGTG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGTGGATAAATCGCCCTaGGACAGAGGCTATGTGTGC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTVDKSP*DRGYVC
Trigger: GCACACATAGCCTCTGTCCCAGGGCGATTTATCCAC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGACCCATAGGGCCTTaGCTAGACGAGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGPIGP*LDEGAP
Trigger: AGGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGGAAGTCATTGCTTGTaGATCCTCGGATGGGGACCC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLGSHCL*ILGWGP
Trigger: GGGTCCCCATCCGAGGATCCACAAGCAATGACTTCC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp GCACCGGATTCTGCAGAGGGAACAGGGACTAGGCTGTaGGCCCCAGCCGTCTATGGAGTTCTCAGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: APDSAEGTGTRL*APAVYGVLRKD
Trigger: ATCCTTCCTGAGAACTCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTGTTCCCTCTGCAGAATCCGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp GAGCTCCTGGAGGTGACTCAGTCATGGAAAGACCCCTaGAAGGCCTTGAAGAGCTGGCTGGGGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: ELLEVTQSWKDP*KALKSWLGLLT
Trigger: AGTGAGCAGCCCCAGCCAGCTCTTCAAGGCCTTCAAGGGGTCTTTCCATGACTGAGTCACCTCCAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp CCCTGCATCATCCCCACACGTCGGCTCGCTGAGCCATaGTCTGTTGTGGTACCCTGGAGTTGCTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: PCIIPTRRLAEP*SVVVPWSCWLL
Trigger: TAGCAACCAGCAACTCCAGGGTACCACAACAGACAATGGCTCAGCGAGCCGACGTGTGGGGATGATGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTCCCTAAGGACTTGGGGTGGCAGGACATGAGCTATGATGTATGGCTGGGGTCATCATCCACCACCAGGTaGTTGAAACCCTCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FPKDLGWQDMSYDVWLGSSSTTR*LKPSAG
Trigger: GCCCGCCGAGGGTTTCAATCACCTGGTGGTGGATGA...TGACCCCAGCCATACATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAAAAGGCTCCCCCAGCTTaGAGAGGTCCTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKKAPPA*RGPPAS
Trigger: TGAGGCTGGAGGACCTCTTCAAGCTGGGGGAGCCTT...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTGATCACTCCAAAGACTaGGCCGCTCTCGTTGACACC +
Preference number: 4 (lower is better)
Translates to: CCSTVGSILSALCMHTHLDHSKD*AALVDT
Trigger: GGTGTCAACGAGAGCGGCTCAGTCTTTGGAGTGATC...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp ATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTCCTCCTGGATGTCCTTCACCTTaGGCCAGGCCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: IGAHDTKCFHFLRHSPPPGCPSP*ARPGPA
Trigger: CGCTGGACCTGGCCTGGCTCAAGGTGAAGGACATCC...AGGAGGAGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTACAGTGGGGGTCGCCTaGGCCAAGGCACTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLTVGVA*AKALAA
Trigger: TGCGGCGAGTGCCTTGGCTCAGGCGACCCCCACTGT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGATGATAATCTAGACTaGGGCACGGCTTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTDDNLD*GTAWCV
Trigger: GACACACCAAGCCGTGCCTCAGTCTAGATTATCATC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGGGGAAGAGGCCCTTaGTGTAGACGAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRGRGP*CRRGPG
Trigger: TCCTGGTCCTCGTCTACATCAAGGGCCTCTTCCCCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGGAGGACAGACAGATaGGCACGTGTATCCCATCTT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRRTDR*ARVSHL
Trigger: AAGATGGGATACACGTGCTCATCTGTCTGTCCTCCT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGTGGGAGCTTTAGTTTaGAACAGAAGTGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGVGALV*NRSGMG
Trigger: CCCCATCCCACTTCTGTTTCAAACTAAAGCTCCCAC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGCAGATGGAGCCTATaGCGCTGCCTCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMCRWSL*RCLSPS
Trigger: GGAGGGCGAGAGGCAGCGGCATAGGCTCCATCTGCA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCTTGTCATCCAGGTTaGTGTAGGAGACGATCACTC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGACHPG*CRRRSL
Trigger: GAGTGATCGTCTCCTACAGCAACCTGGATGACAAGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGGCCAGGTCCAGCGTaGCCTCGCCCCGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERPGPA*PRPGNK
Trigger: CTTGTTACCGGGGCGAGGGCACGCTGGACCTGGCCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGGCCAGGTCCAGCGTaGCCTCGCCCCGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGRPGPA*PRPGNK
Trigger: CTTGTTACCGGGGCGAGGGCACGCTGGACCTGGCCT...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCTTGGGGTCATGGGTaGAGACATGCCGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSWGHG*RHAGIY
Trigger: GTAAATACCGGCATGTCTGCACCCATGACCCCAAGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGAGGCCGCCAGCCACTaGGATGCTGACGATGGCGGG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLEAASH*DADDGG
Trigger: CCCGCCATCGTCAGCATCGCAGTGGCTGGCGGCCTC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGTGGAGTTGTTCACTaGGTTATAGGCTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGGVVH*VIGCHL
Trigger: CAGGTGACAGCCTATAACGCAGTGAACAACTCCACC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATTGAACTCATTCATGTaGATCCGGGACTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTLNSFM*IRDCSA
Trigger: GGCTGAGCAGTCCCGGATGCACATGAATGAGTTCAA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCTGGATGTTTGCTCTaGCAGTGGGGTAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPGCLL*QWGKED
Trigger: ATCTTCCTTACCCCACTGGCAGAGCAAACATCCAGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGCCCCCTTCTTCCCTaGTACCTTAAGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSPLLP*YLKPFS
Trigger: AGAGAAGGGCTTAAGGTAGCAGGGAAGAAGGGGGCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGCAGTCTCCCCTACTaGACGCGCCGCGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMCSLPY*TRRVSL
Trigger: GAGGGAAACGCGGCGCGTCCAGTAGGGGAGACTGCA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321063.8
CDS-3UTR CCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACAGGGCATGGCTTTCATaGCAGAGGCGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYRAWLS*QRRVPV
Trigger: CACTGGGACCCGCCTCTGCCATGAAAGCCATGCCCT...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCCTGGGACAGCGGGGCTaGCTGCCGGGTGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGLGQRG*LPGEQS
Trigger: ACTTTGCTCACCCGGCAGCCAGCCCCGCTGTCCCAG...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TACATGATGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACCTGGACGATGCGGGGTaGGTAACACTTGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: YMMLQYGGLHPLCPVYAHLDDAG*VTLGVV
Trigger: GACAACCCCAAGTGTTACCCACCCCGCATCGTCCAG...GTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTTGGTGGTGGAGCCTaGTGGAGACACCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLGGGA*WRHHLR
Trigger: CCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATACACCTGCTCCTTGGTaGTGGAGCCTGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHTPAPW*WSLVET
Trigger: TGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACGCACGGCCCCCGCTTTaGACAGGTAGGCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHARPPL*TGRQPA
Trigger: TGCAGGCTGCCTACCTGTCCAAAGCGGGGGCCGTGC...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGGTCATCATCTGGATaGACTCCAAGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLRSSSG*TPRVLP
Trigger: TGGCAGGACCCTTGGAGTCCATCCAGATGATGACCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGCCACTGGCTCTCCTaGGCAGGGCAGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSHWLS*AGQCWR
Trigger: GCGCCAGCACTGCCCTGCCCAGGAGAGCCAGTGGCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAGCCACTGGCTCTCCTaGGCAGGGCAGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLSHWLS*AGQCWR
Trigger: GCGCCAGCACTGCCCTGCCCAGGAGAGCCAGTGGCT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGGTCCCTCCGGACATaGGCCCCCGGCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGSLRT*APGWAS
Trigger: TGAAGCCCAGCCGGGGGCCCATGTCCGGAGGGACCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGGATGAGCAGGGACTaGACGTTGTCCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLRMSRD*TLSRMK
Trigger: CTTCATCCTGGACAACGTCCAGTCCCTGCTCATCCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGTGGTCTTCAATTCCTaGGAACAGCACCCGCATGGT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLVVFNS*EQHPHG
Trigger: ACCATGCGGGTGCTGTTCCCAGGAATTGAAGACCAC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGCTTCAGCACATCAGTaGCGTACTCCAGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLASAHQ*RTPACS
Trigger: AGAGCAAGCTGGAGTACGCCACTGATGTGCTGAAGC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGCAGCTTTGGGCCGGTaGGAGCAAGGCACATTCTTG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHAALGR*EQGTFL
Trigger: CAAGAATGTGCCTTGCTCCCACCGGCCCAAAGCTGC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCTCCAGGGCGGCCCTaGAAGGACGGTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPPGRP*KDGSQL
Trigger: CAGCTGAGAACCGTCCTTCCAGGGCCGCCCTGGAGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGATGGGCTGTGGCTCTaGATACCTGGCTCAAATTTC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGDGLWL*IPGSNF
Trigger: GAAATTTGAGCCAGGTATCCAGAGCCACAGCCCATC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGTTTGCTCTGCCAGTaGGGTAAGGAAGATCCCTGG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLCLLCQ*GKEDPW
Trigger: CCAGGGATCTTCCTTACCCCACTGGCAGAGCAAACA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCCTGGGAACAGTCCTaGACAGTCTGCCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSWEQS*TVCLKL
Trigger: AAGTTTGAGGCAGACTGTCCAGGACTGTTCCCAGGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGGCACGGAGCTGCCTaGGGTAGGTCTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGHGAA*GRSSLG
Trigger: CCCCAGAGAAGACCTACCCCAGGCAGCTCCGTGCCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATTGCTTTTGCAATCCTaGCGGAGGGAAAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTLLLQS*RRESLG
Trigger: ACCCAAGCTTTCCCTCCGCCAGGATTGCAAAAGCAA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCTTCGTCCTGTGCCTaGATTGCGGCTGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSSSCA*IAADFC
Trigger: ACAGAAGTCAGCCGCAATCCAGGCACAGGACGAAGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TACATGATGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACCACACACACACACACTaGCCAGGCGACTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: YMMLQYGGLHPLCPVYAHHTHTH*PGDLAA
Trigger: TGCAGCCAAGTCGCCTGGCCAGTGTGTGTGTGTGTG...GTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATCATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 72 bp CAAGAGCATGCCACCCTTAGCACCATGAGGAGAGGTTaGCAGAGTGTCCCAGCCTCATTCGGGAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: QEHATLSTMRRG*QSVPASFGSCV
Trigger: GACACAGCTCCCGAATGAGGCTGGGACACTCTGCAAACCTCTCCTCATGGTGCTAAGGGTGGCATGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACCTCTCGCCCTCCTCTaGACGTGTGCGTGTGCGCGC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEPLALL*TCACAR
Trigger: GCGCGCACACGCACACGTTCAGAGGAGGGCGAGAGG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCACCACCAGGTGATTaGAACCCTCGGCGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPPPGD*NPRRAL
Trigger: GAGAGCCCGCCGAGGGTTTCAATCACCTGGTGGTGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGATCACTCCAAAGACTaGGCCGCTCTCGTTGACACC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHDHSKD*AALVDT
Trigger: GGTGTCAACGAGAGCGGCTCAGTCTTTGGAGTGATC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATTATCTGCTTCAAGATaGAGATGCACAGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLSASR*RCTGPT
Trigger: AGTCGGCCCTGTGCATCTTCATCTTGAAGCAGATAA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACATGCCGGTCTCCTTTaGTTTGAGCTGAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLHAGLL*FELKLY
Trigger: GTACAGCTTCAGCTCAAATCAAAGGAGACCGGCATG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCGCTGCCCTGAATGTTaGGGATGCATTCGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRCPEC*GCIRSH
Trigger: GTGGCTACGAATGCATCCTCAACATTCAGGGCAGCG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCACGCCAGCAACCTTaGCATGGGAGGCGATGTCGC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPRQQP*HGRRCR
Trigger: GCGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTGAGGACCGGGCCATaGATTCAGGCCGACACACAG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVRTGP*IQADTQ
Trigger: CTGTGTGTCGGCCTGAATTCATGGCCCGGTCCTCAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGAAGTAATAGAGCTGTaGGGACCGGGCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLEVIEL*GPGHEF
Trigger: GAATTCATGGCCCGGTCCTCACAGCTCTATTACTTC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGCTGGGCTTCAGATCTaGGAGAGTCAGTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLAGLQI*ESQCHE
Trigger: TTCATGACACTGACTCTCTCAGATCTGAAGCCCAGC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGAACCTCACAGATATTaGTGTGCTCCTTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTEPHRY*CAPSLH
Trigger: ATGGAGGGAAGGAGCACATCAATATCTGTGAGGTTC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGCGAGGGCGGGCGCCTaGCAGGTCATCTCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEARAGA*QVISVA
Trigger: CGCTACTGAGATGACCTGTCAGGCGCCCGCCCTCGC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGACGTTGTCCAGGATaGAGCCAAACTCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGRCPG*SQTPRA
Trigger: GGCCCGAGGAGTTTGGCTTCATCCTGGACAACGTCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGAGCTCCAGGATTCCTaGGGGACCAAAGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHELQDS*GTKGLK
Trigger: TTTGAGGCCTTTGGTCCCTCAGGAATCCTGGAGCTC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCCCAGCACACTCCTTaGGGAACTTGTAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPQHTP*GTCRGG
Trigger: TCCTCCTCTACAAGTTCCTCAAGGAGTGTGCTGGGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGGCATTGTCTGGGCTaGCACAGCTCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMWHCLG*HSSGPG
Trigger: CCCTGGTCCTGAGCTGTGTCAGCCCAGACAATGCCA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAACCCTTGATGAAGGTTaGCAAAGGAGGGTGGAGATA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGTLDEG*QRRVEI
Trigger: TATCTCCACCCTCCTTTGTCAACCTTCATCAAGGGT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACTCTGCATTTCACGTTaGCCCTTGATGAAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTLCISR*PLMKVD
Trigger: GTCAACCTTCATCAAGGGTCAACGTGAAATGCAGAG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAAGGTCTCCTTAGGATaGAAGGTTCCTAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGKVSLG*KVPRTL
Trigger: GAGGGTTCTAGGAACCTTTCATCCTAAGGAGACCTT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAAGGTCTCCTTAGGATaGAAGGTTCCTAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTKVSLG*KVPRTL
Trigger: GAGGGTTCTAGGAACCTTTCATCCTAAGGAGACCTT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGCAGGCGACCACCCTaGTTTCCTATGGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGRRPP*FPMDKR
Trigger: GCGCTTGTCCATAGGAAATCAGGGTGGTCGCCTGCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACCTCGAGGGAGGCCGTaGAGGGGCCTCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEPRGRP*RGLHPT
Trigger: TGTGGGATGGAGGCCCCTTCACGGCCTCCCTCGAGG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTCCCTAAGGACTTGGGGTGGCAGGACATGAGCTATGATGTATGGCTGGGGTCAGTGACAAATGACCGCTaGTTCTGGGACAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: FPKDLGWQDMSYDVWLGSVTNDR*FWDSGA
Trigger: AGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCAC...TGACCCCAGCCATACATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CGCTTGGGGCAGAGAAAAGAGACCAACTACCTAGCCAAGCTAAGCAGAGACACATGGTCAGGGGCTCATTaGAGGTCTGGACGATGCGGG +
Preference number: 4 (lower is better)
Translates to: RLGQRKETNYLAKLSRDTWSGAH*RSGRCG
Trigger: CCCGCATCGTCCAGACCTGCAATGAGCCCCTGACCA...TGTGTCTCTGCTTAGCTTGGCTAGGTAGTTGGTCTCTTTTCTCTGCCCCAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAACCAGCCTCAGCAGCTTaGAGATGCCTTGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKPASAA*RCLGTG
Trigger: GCCTGTACCAAGGCATCTGCAAGCTGCTGAGGCTGG...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGGCTGTGTCCTCCTTaGAAAGCCTCACGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRLCPP*KASRAW
Trigger: CCAAGCTCGTGAGGCTTTGCAAGGAGGACACAGCCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGGACTCCAAGGGTCCTaGCAAGCACGGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLGLQGS*QARPPL
Trigger: AAGCGGGGGCCGTGCTTGGCAGGACCCTTGGAGTCC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGATCTCCACGAAGCCTaGATGCTGGCTGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMDLHEA*MLAGLG
Trigger: GCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTGACACGGTCACGGTaGACGGCTTCTCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLTRSR*TASPQP
Trigger: TGGTTGGGGAGAAGCCGTGCACCGTGACCGTGTCAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATACTCCAGCTTGCTCTaGAGCACGGTCATGATGAGT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLYSSLL*STVMMS
Trigger: ACTCATCATGACCGTGCTGCAGAGCAAGCTGGAGTA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGGTCGGCCAGCAGCTaGTTCAGCACATCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRSASS*FSTSVA
Trigger: CGCCACTGATGTGCTGAAGCAGCTGCTGGCCGACCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTCCAGATCCATATCTaGAGCTTTGGGCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLQIHI*SFGPVG
Trigger: TCCCACCGGCCCAAAGCTGCAGATATGGATCTGGAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATTCTCCACCTGGTACTaGACTTGCCAAAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTFSTWY*TCQNLW
Trigger: CCAAAGGTTTTGGCAAGTGCAGTACCAGGTGGAGAA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGGTGCAGGGATCATaGTGCCATTGGAATGTACCT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLWVQGS*CHWNVP
Trigger: AGGTACATTCCAATGGCAGCATGATCCCTGCACCCA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTGCTCGCAAAGTTTaGAGGGGGCAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLAARKV*RGQGAG
Trigger: CCCCGCTCCCTGCCCCCTGCAAACTTTGCGAGCAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGGGCATGGCTTTCATaGCAGAGGCGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRAWLS*QRRVPV
Trigger: CACTGGGACCCGCCTCTGCCATGAAAGCCATGCCCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAATGACCGCTGCTTCTaGGACAGCGGGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPENDRCF*DSGAGC
Trigger: GCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCGCCTCAGAGTTCTTaGTCAGTTTCCGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPPQSS*SVSGWR
Trigger: TCTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACCTTGGTGGTGGAGCCTaGTGGAGACACCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYLGGGA*WRHHLR
Trigger: CCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAG...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCAGGTCTTGGGGTCATaGGTGCAGACATGCCGGTAT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHQVLGS*VQTCRY
Trigger: ATACCGGCATGTCTGCACCCATGACCCCAAGACCTG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTGGCGCAGGGTGCACTaGCCTGGGCCCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSWRRVH*PGPWHQ
Trigger: CTGGTGCCAGGGCCCAGGCCAGTGCACCCTGCGCCA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGGGCAGGGCAGTGCTaGCGCAGGGTGCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEWAGQC*RRVHWP
Trigger: AGGCCAGTGCACCCTGCGCCAGCACTGCCCTGCCCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCGGTCAGGTCTGACTaGTGGTCAGGACCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSVRSD*WSGPRA
Trigger: CGCTCTGGGTCCTGACCACCAGTCAGACCTGACCGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGAACAGCACCCGCATaGTGTAAGTTCTATAGTCCA +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGTAPA*CKFYSP
Trigger: TGGACTATAGAACTTACACCATGCGGGTGCTGTTCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGCTGTTGGCATTGTCTaGGCTGACACAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHAVGIV*ADTAQD
Trigger: GTCCTGAGCTGTGTCAGCCCAGACAATGCCAACAGC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGTTGAGGATCTTTACTaGGACCTCGGGGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHVEDLY*DLGAVG
Trigger: GCCAACAGCCCCGAGGTCCCAGTAAAGATCCTCAAC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGGCTGTCACCTGCTTaGACACTAATGCCACCACGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRLSPA*TLMPPR
Trigger: CCGTGGTGGCATTAGTGTCCAAGCAGGTGACAGCCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACGGTCCCCCTCCTTCTaGTCTCCGTGCTCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERSPSF*SPCSWF
Trigger: GAACCACGAGCACGGAGACCAGAAGGAGGGGGACCG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCACACTGGTCATCGTaGTCCAGAGGTCCAAGGATC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPHWSS*SRGPRI
Trigger: GATCCTTGGACCTCTGGACCACGATGACCAGTGTGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGACTTTGCTGGAAATaGTGTGGTTTCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGLCWK*CGFFPK
Trigger: CTTGGGGAAGAAACCACACCATTTCCAGCAAAGTCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCAAGCTTCTCCACCTaGTACTGCACTTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSSFST*YCTCQN
Trigger: GTTTTGGCAAGTGCAGTACCAGGTGGAGAAGCTTGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACATTGGAATGTACCTTaGCCTGTGGGACACTTGGGT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLHWNVP*PVGHLG
Trigger: ACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGTAGGCTTTAGGGGCTaGCTTTGGGTGCAGGGATCA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHVGFRG*LWVQGS
Trigger: TGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTAC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGGAGGTGGAGATGCTaGGCCAGTACATCAACCTTC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGRWRC*ASTSTF
Trigger: GAAGGTTGATGTACTGGCCCAGCATCTCCACCTCCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGGGACCTGGTTGCATaGGGGAGGTGGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRDLVA*GRWRCW
Trigger: CCAGCATCTCCACCTCCCCCATGCAACCAGGTCCCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGCTCCTGTACTCAAGTaGATAAATCGCCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLAPVLK*INRPGT
Trigger: TGTCCCAGGGCGATTTATCCACTTGAGTACAGGAGC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAATTACTGTGTCCCCTTaGTCCTGGGAAAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTITVSP*SWERRQ
Trigger: CTGTCTTCTTTCCCAGGACCAAGGGGACACAGTAAT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACATCTGTCAAAAGTGTaGGGAAGCACCAGGAATAGC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGHLSKV*GSTRNS
Trigger: GCTATTCCTGGTGCTTCCCCACACTTTTGACAGATG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp TCATCCCCACACGTCGGCTCGCTGAGCCATTGTCTGTaGTGGTACCCTGGAGTTGCTGGTTGCTATGGTAAC +
Preference number: 4 (lower is better)
Translates to: SSPHVGSLSHCL*WYPGVAGCYGN
Trigger: GTTACCATAGCAACCAGCAACTCCAGGGTACCACAACAGACAATGGCTCAGCGAGCCGACGTGTGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGCGGGAGCGCCGCATTaGCACTGCAGATGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLAGAPH*HCRWSL
Trigger: TAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTCCCTAAGGACTTGGGGTGGCAGGACATGAGCTATGATGTATGGCTGGGGTCACTGAGCCGCTCTCGTTaGCACCTGACAGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: FPKDLGWQDMSYDVWLGSLSRSR*HLTDSA
Trigger: AGCACTATCTGTCAGGTGTCAACGAGAGCGGCTCAG...TGACCCCAGCCATACATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACCCACTGCCGTGGCAATaGACAGCTTGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYPLPWQ*TACHPG
Trigger: ACCTGGATGACAAGCTGTTCATTGCCACGGCAGTGG...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATTATCTGCTTCAAGATaGAGATGCACAGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLLSASR*RCTGPT
Trigger: AGTCGGCCCTGTGCATCTTCATCTTGAAGCAGATAA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGGATGTCCTTCACCTTaGGCCAGGCCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLGCPSP*ARPGPA
Trigger: CGCTGGACCTGGCCTGGCTCAAGGTGAAGGACATCC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCGGTCCCTGTCCTCCGTaGAGACGGGAATTCCACGCA +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGGPCPP*RREFHA
Trigger: TGCGTGGAATTCCCGTCTTCACGGAGGACAGGGACC...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCAGTTGACGCCAGCTaGCAGCTCCGGGACATTGTA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMAVDAS*QLRDIV
Trigger: TACAATGTCCCGGAGCTGTCAGCTGGCGTCAACTGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCCTTTGATTTGAGCTaGAGCTGTACGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSFDLS*SCTTWW
Trigger: CCACCATGTCGTACAGCTTCAGCTCAAATCAAAGGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTGAGGACCGGGCCATaGATTCAGGCCGACACACAG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVRTGP*IQADTQ
Trigger: CTGTGTGTCGGCCTGAATTCATGGCCCGGTCCTCAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGAACCTCACAGATATTaGTGTGCTCCTTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLEPHRY*CAPSLH
Trigger: ATGGAGGGAAGGAGCACATCAATATCTGTGAGGTTC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCCTCTCGGTCAGGTCTaGCTGGTGGTCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLPLGQV*LVVRTQ
Trigger: CTGGGTCCTGACCACCAGTCAGACCTGACCGAGAGG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCTCTCGGTCAGGTCTaGCTGGTGGTCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPLGQV*LVVRTQ
Trigger: CTGGGTCCTGACCACCAGTCAGACCTGACCGAGAGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGAGCAGCTGGACATCTaGCACGGTCACGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLEQLDI*HGHGAR
Trigger: CCGTGCACCGTGACCGTGTCAGATGTCCAGCTGCTC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGATCATAGGTGTCCGTaGGCGGAGGCTGTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDHRCP*AEAVGA
Trigger: AGCCCCGACAGCCTCCGCTCACGGACACCTATGATC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACTCATTCTGAGTGGGTaGCAAGGAATGATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTLILSG*QGMMSD
Trigger: ATCAGACATCATTCCTTGTCACCCACTCAGAATGAG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCCTTCCAGGTCCTGTaGCTGACTTCTTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMAFQVL*LTSWEG
Trigger: TCCCTCCCAAGAAGTCAGTCACAGGACCTGGAAGGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCACAGAGGGTGGTGCTaGGACCTGGGCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLHRGWC*DLGPSQ
Trigger: CTGTGATGGGCCCAGGTCTCAGCACCACCCTCTGTG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTTAGTCCTGTTTGGTaGAGTGGTCTCGGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLSPVW*SGLGFL
Trigger: TAAGAAACCGAGACCACTTCACCAAACAGGACTAAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCTCCTCTGAACGTGTaGGTGTGCGCGCGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPPLNV*VCARVA
Trigger: AGCCACACGCGCGCACACGCACACGTTCAGAGGAGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGCAGATGGAGCCTATaGCGCTGCCTCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLCRWSL*RCLSPS
Trigger: GGAGGGCGAGAGGCAGCGGCATAGGCTCCATCTGCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTGCAGGTCTGGACGATaGGGGGTGGGTAACACTTGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMCRSGR*GVGNTW
Trigger: CCAAGTGTTACCCACCCCGCATCGTCCAGACCTGCA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGGCCAGGTCCAGCGTaGCCTCGCCCCGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRPGPA*PRPGNK
Trigger: CTTGTTACCGGGGCGAGGGCACGCTGGACCTGGCCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTCTCCGAGGCAAACCTaGGGGGCTCCTTGGACCGCT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLSPRQT*GAPWTA
Trigger: AGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGGCACCTCCTTGGCTaGAGGGGAGTAGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGHLLG*RGVALD
Trigger: ATCCAGTGCTACTCCCCTGCAGCCAAGGAGGTGCCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCCACGAAGCCTGCATaGTGGCTGGGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSTKPA*WLGLAS
Trigger: GGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACGGGCCATCACTTTGTaGCTGCCGATGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERAITL*LPMRLG
Trigger: CCCCAACCTCATCGGCAGGCACAAAGTGATGGCCCG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGGAGGCTGTCGGGGCTaGCCGTGTACCGGATCATGT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLGGCRG*PCTGSC
Trigger: ACATGATCCGGTACACGGGCAGCCCCGACAGCCTCC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACCATGTTTATCAGCCTaGTCATCCAGGAAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGPCLSA*SSRKSN
Trigger: GTTTGACTTCCTGGATGAGCAGGCTGATAAACATGG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATCTCCTCGCTGTATTTaGCCACATAGGAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSPRCI*PHRRRS
Trigger: AGATCTTCTCCTATGTGGGCAAATACAGCGAGGAGA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGAGAGAAACAGCGCTaGTCAGGGGATGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHREKQR*SGDAAD
Trigger: ATCAGCAGCATCCCCTGAGCAGCGCTGTTTCTCTCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGCCCCCTTCTTCCCTaGTACCTTAAGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSPLLP*YLKPFS
Trigger: AGAGAAGGGCTTAAGGTAGCAGGGAAGAAGGGGGCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGCTCACTTACCAGGCTaGGGGTGCACAAGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEAHLPG*GCTRGR
Trigger: CCTACCCCTTGTGCACCCGCAGCCTGGTAAGTGAGC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATGCTGGAAGAAGAGCTaGATAGACCAAGTCTACTTG +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGCWKKS*IDQVYL
Trigger: CAAGTAGACTTGGTCTATGCAGCTCTTCTTCCAGCA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACCCCACCATGAGGAGGTaGGAGAGAAGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHPTMRR*ERRQVQ
Trigger: CTGGACCTGCCTTCTCTCCCACCTCCTCATGGTGGG...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTGGACGATGCGGGGTaGGTAACACTTGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLDDAG*VTLGVV
Trigger: GACAACCCCAAGTGTTACCCACCCCGCATCGTCCAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGTTTCCGGCTGGAGATaGTGGGAAAATACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHVSGWR*WENTRA
Trigger: AGCCCGAGTATTTTCCCACCATCTCCAGCCGGAAAC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGCCTGCTCCTTGGTGGTaGAGCCTGGTGGAGACACCA +
Preference number: 4 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEPAPWW*SLVETP
Trigger: TGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGG...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCACGGCCCCCGCTTTaGACAGGTAGGCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPARPPL*TGRQPA
Trigger: TGCAGGCTGCCTACCTGTCCAAAGCGGGGGCCGTGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGGAGGGCGTTGCCCCTaGGTCCATCCACCCGGATCT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEGGRCP*VHPPGS
Trigger: AGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCAGTGGCAGCGGTATaGACTCTCCACGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPVAAV*TLHAGQ
Trigger: CTGTCCTGCGTGGAGAGTCCATACCGCTGCCACTGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGCCCAGACTGGGGCTaGGGGAGGTTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLCPDWG*GRFLAF
Trigger: GAAGGCCAAGAACCTCCCCCAGCCCCAGTCTGGGCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCAGGGTGCACTGGCCTaGGCCCTGGCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSQGALA*ALAPAT
Trigger: TGTGGCTGGTGCCAGGGCCCAGGCCAGTGCACCCTG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACATGCTGGCTGGGCTTaGCCTCCCCCATCTCACACA +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEHAGWA*PPPSHT
Trigger: TGTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAACATGGGCCCCCGGCTaGGCTTCAGATCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPETWAPG*ASDLRE
Trigger: CTCTCTCAGATCTGAAGCCCAGCCGGGGGCCCATGT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGCTCAATCCGCACGATaGTGGGGTCTTCCACATACT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHAQSAR*WGLPHT
Trigger: AGTATGTGGAAGACCCCACCATCGTGCGGATTGAGC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCGGTCAGGTCTGACTaGTGGTCAGGACCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESVRSD*WSGPRA
Trigger: CGCTCTGGGTCCTGACCACCAGTCAGACCTGACCGA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCAGCTTTGGGCCGGTaGGAGCAAGGCACATTCTTG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMAALGR*EQGTFL
Trigger: CAAGAATGTGCCTTGCTCCCACCGGCCCAAAGCTGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTGAACCACTGGAGATaGAACTGTGGGAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLNHWR*NCGKGE
Trigger: CTCTCCCTTCCCACAGTTCCATCTCCAGTGGTTCAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTGCCTGGCTTTCTACTaGCGGGGGAGCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPCLAFY*RGSRQG
Trigger: GCCCTGCCTGCTCCCCCGCCAGTAGAAAGCCAGGCA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCACCCTGATTTCCTATaGACAAGCGCCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHHPDFL*TSALSF
Trigger: GAAGGAGAGGGCGCTTGTCCATAGGAAATCAGGGTG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGCCTGTGGGACACTTaGGTTATCCACTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGLWDT*VIHCSQ
Trigger: TTGGGAACAGTGGATAACCCAAGTGTCCCACAGGCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAAGGCCTTGAAGAGCTaGCTGGGGCTGCTCACTGGG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEKALKS*LGLLTG
Trigger: CCCAGTGAGCAGCCCCAGCCAGCTCTTCAAGGCCTT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGGGTAGGTCTTCTCTaGGGGTCAGGTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGVGLL*GSGELL
Trigger: CAGGAGCTCACCTGACCCCCAGAGAAGACCTACCCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTGGAAGAGATGGGCTaGCCCCTACATGCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLEEMG*PLHAKV
Trigger: CACTTTAGCATGTAGGGGCCAGCCCATCTCTTCCAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCAGCAGGACCCTGCTaGAAGAGATGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSAGPC*KRWAGP
Trigger: GGGGCCAGCCCATCTCTTCCAGCAGGGTCCTGCTGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTTTGAAGCTCAACTCTaGGTCCTCTGGCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHFEAQL*VLWLGQ
Trigger: TTGGCCCAGCCAGAGGACCCAGAGTTGAGCTTCAAA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAAAAAGGTCGGAAAATaGGGATCGATTCCGAACACC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGKKVGK*GSIPNT
Trigger: GGTGTTCGGAATCGATCCCCATTTTCCGACCTTTTT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR CCA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGGATGCTGCAGTACGGTaGGCTCCATCCTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEDAAVR*APSSLP
Trigger: GGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATC...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTCAGGCCAGGAACCTGTaGCACACCCTAAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: CCSTVGSILSALCMHTHLQARNL*HTLKRI
Trigger: AATTCTCTTTAGGGTGTGCCACAGGTTCCTGGCCTG...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 72 bp TTGGGTGCAGGGATCATGCTGCCATTGGAATGTACCTaGGCCTGTGGGACACTTGGGTTATCCACTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LGAGIMLPLECT*ACGTLGLSTVP
Trigger: GGGAACAGTGGATAACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCATGATCCCTGCACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp TCTTCTTGCAGTGGAGGTCATTTGGGAAGTCATTGCTaGTGGATCCTCGGATGGGGACCCATAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSCSGGHLGSHC*WILGWGPIGPW
Trigger: CCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp GGATTCTTCTTGCAGTGGAGGTCATTTGGGAAGTCATaGCTTGTGGATCCTCGGATGGGGACCCATAGGGCC +
Preference number: 4 (lower is better)
Translates to: GFFLQWRSFGKS*LVDPRMGTHRA
Trigger: GGCCCTATGGGTCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACGCTCTCCTCGGAATGTaGCAAATGACCGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYALLGM*QMTAAS
Trigger: AGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGC...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTCATCCACCACCAGGTaGTTGAAACCCTCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLSSTTR*LKPSAG
Trigger: GCCCGCCGAGGGTTTCAATCACCTGGTGGTGGATGA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAAGGCTCCCCCAGCTTaGAGAGGTCCTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLKAPPA*RGPPAS
Trigger: TGAGGCTGGAGGACCTCTTCAAGCTGGGGGAGCCTT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGGTCCCTGTCCTCCGTaGAGACGGGAATTCCACGCA +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLGPCPP*RREFHA
Trigger: TGCGTGGAATTCCCGTCTTCACGGAGGACAGGGACC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCCTCAAAGGTGCAGTTaGCGCCAGCTGACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLPQRCS*RQLTAP
Trigger: CGGAGCTGTCAGCTGGCGTCAACTGCACCTTTGAGG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCGGGATTATCTCTGTaGTGCGGGGGTTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPGLSL*CGGLCT
Trigger: AGTGCACAAACCCCCGCATCACAGAGATAATCCCGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGCTGGGCTTCAGATCTaGGAGAGTCAGTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHAGLQI*ESQCHE
Trigger: TTCATGACACTGACTCTCTCAGATCTGAAGCCCAGC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGGTCTTCCACATACTaGAAGACCAGGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGSSTY*KTRSWW
Trigger: CCACCAGGACCTGGTCTTTCAGTATGTGGAAGACCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGGGCGTGCCAGGCTTaGGCTCCAGGATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEWACQA*APGFLR
Trigger: CCTCAGGAATCCTGGAGCTCAAGCCTGGCACGCCCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGCAGCCGCTTCAGCGTaGGGTCACTTTCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEAAASA*GHFRGT
Trigger: AGTCCCGCGAAAGTGACCTCACGCTGAAGCGGCTGC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGTGAAGGCAAGACTGTaGATCCTTCTCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHVKARL*ILLLNL
Trigger: GAGGTTGAGGAGAAGGATTCACAGTCTTGCCTTCAC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGGCAGGCGACCACCCTaGTTTCCTATGGACAAGCGC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLGRRPP*FPMDKR
Trigger: GCGCTTGTCCATAGGAAATCAGGGTGGTCGCCTGCC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGGAGGACAGACAGATaGGCACGTGTATCCCATCTT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRRTDR*ARVSHL
Trigger: AAGATGGGATACACGTGCTCATCTGTCTGTCCTCCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GACACAGAGGGGTTGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCTGGGGTGGCAGGACATaGGCTATGATGTATGGCTGG +
Preference number: 4 (lower is better)
Translates to: DTEGLPALTKSPALGLTFWGGRT*AMMYGW
Trigger: CCAGCCATACATCATAGCTCATGTCCTGCCACCCCA...GAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCTCCGGCCCTGTCTCATaGGTCACCAAGACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGSGPVS*VTKTFR
Trigger: CCTGAAGGTCTTGGTGACGCATGAGACAGGGCCGGA...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCTGCAGGTCTGGACGATaGGGGGTGGGTAACACTTGG +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGCRSGR*GVGNTW
Trigger: CCAAGTGTTACCCACCCCGCATCGTCCAGACCTGCA...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGGTCAGGGGCTCATTaGAGGTCTGGACGATGCGGG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLWSGAH*RSGRCG
Trigger: CCCGCATCGTCCAGACCTGCAATGAGCCCCTGACCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGGTCAGGGGCTCATTaGAGGTCTGGACGATGCGGG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLWSGAH*RSGRCG
Trigger: CCCGCATCGTCCAGACCTGCAATGAGCCCCTGACCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TACATGATGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACGCTTGTCATCCAGGTTaGTGTAGGAGACGATCACTC +
Preference number: 4 (lower is better)
Translates to: YMMLQYGGLHPLCPVYAHACHPG*CRRRSL
Trigger: GAGTGATCGTCTCCTACAGCAACCTGGATGACAAGC...GTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATCATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAAAGACGTACGCGAACATaGCATCCGCCTCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKRRTRT*HPPQSS
Trigger: AGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCT...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGGTACTCCACCCCACTaGGCTCACAGCCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLGTPPH*AHSQWA
Trigger: TGCCCATTGGCTGTGAGCGCAGTGGGGTGGAGTACC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATAGGACTCCAAGGGTCCTaGCAAGCACGGCCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIGLQGS*QARPPL
Trigger: AAGCGGGGGCCGTGCTTGGCAGGACCCTTGGAGTCC...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGTTCTTGTAGACATATaGGATGACAGACGTCATGCG +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLVLVDI*DDRRHA
Trigger: CGCATGACGTCTGTCATCGCATATGTCTACAAGAAC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAAGCTTGCCACTTTTGGTaGCCACAAAGGCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKACHFW*PQRPES
Trigger: ACTCTCTGGCCTTTGTGGGCACCAAAAGTGGCAAGC...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCGGGGTCCACCACCTaGACCGTCTCATACTGGAGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPGSTT*TVSYWR
Trigger: CCTCCAGTATGAGACGGTGCAGGTGGTGGACCCCGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTCTTGGGGTCATGGGTaGAGACATGCCGGTATTTAC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSWGHG*RHAGIY
Trigger: GTAAATACCGGCATGTCTGCACCCATGACCCCAAGA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTCCACGAAGCCTGCATaGTGGCTGGGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSTKPA*WLGLAS
Trigger: GGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTTGGCCCTGTCCACCTaGACCGACACCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLALST*TDTFIS
Trigger: AGAGATGAAGGTGTCGGTGCAGGTGGACAGGGCCAA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGTGGAGTTGTTCACTaGGTTATAGGCTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGGVVH*VIGCHL
Trigger: CAGGTGACAGCCTATAACGCAGTGAACAACTCCACC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCGTGCGGGTCATGAATaGCATGTTTATCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRAGHE*HVYQPA
Trigger: AGCAGGCTGATAAACATGGCATTCATGACCCGCACG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCTGGTCAGCTCCCTTaGCATGGGCCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESGQLP*HGPGHS
Trigger: AGAATGGCCAGGCCCATGGCAAGGGAGCTGACCAGA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGCTATTCTTTCTCCTaGCTGGCTTTCTACTGGCGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHCYSFS*LAFYWR
Trigger: CCGCCAGTAGAAAGCCAGGCAGGAGAAAGAATAGCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCTCCCCATAGCCTCTaGTTACCTAGTATCAATTTC +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSPHSL*LPSINF
Trigger: GAAATTGATACTAGGTAAGCAGAGGCTATGGGGAGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAATGCTCCATGGACTTTaGTGGAAATGGTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLMLHGL*WKWCGF
Trigger: GAAACCACACCATTTCCAGCAAAGTCCATGGAGCAT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGCAGGCCACGGGGACTaGAGCAAACAGAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEAGHGD*SKQSGR
Trigger: TCTGCCGCTCTGTTTGCTGCAGTCCCCGTGGCCTGC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAAGTCTACTTGCTTTTaGAATCCTGGCGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLKSTCF*NPGGGK
Trigger: TTTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAGGGCATGGCTTTCATaGCAGAGGCGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLRAWLS*QRRVPV
Trigger: CACTGGGACCCGCCTCTGCCATGAAAGCCATGCCCT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTGGGACAGCGGGGCTaGCTGCCGGGTGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLGQRG*LPGEQS
Trigger: ACTTTGCTCACCCGGCAGCCAGCCCCGCTGTCCCAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACGAGCAGGTCATCATCTaGATGGACTCCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYEQVII*MDSKGP
Trigger: AGGACCCTTGGAGTCCATCCAGATGATGACCTGCTC...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TACATGATGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACTTCATTTTCCGCTTCTaGCCCTTGGAGAAGACGGTG +
Preference number: 4 (lower is better)
Translates to: YMMLQYGGLHPLCPVYAHFIFRF*PLEKTV
Trigger: CACCGTCTTCTCCAAGGGCCAGAAGCGGAAAATGAA...GTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCATCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGAAGTTATCGTCAATaGTTAAGAGCGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLRSYRQ*LRAHCC
Trigger: GCAGCAGTGCGCTCTTAACCATTGACGATAACTTCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTACCTGCGGGGCTCCTTaGACCGCTCACACCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSTCGAP*TAHTAP
Trigger: AGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGCTGTACGACATGGTaGTCCCCATTCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSCTTW*SPFSVM
Trigger: CATCACAGAGAATGGGGACCACCATGTCGTACAGCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGCCACATGCGAAGTCTaGGTCAGCCTTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEATCEV*VSLEAQ
Trigger: CTGTGCCTCAAGGCTGACCCAGACTTCGCATGTGGC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTACATGGGCCCCCGGCTaGGCTTCAGATCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLTWAPG*ASDLRE
Trigger: CTCTCTCAGATCTGAAGCCCAGCCGGGGGCCCATGT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGCAGACAATGTAGGATaGAGATCGCCTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHADNVG*RSPVEE
Trigger: CTCTTCCACAGGCGATCTCCATCCTACATTGTCTGC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATGTATGAGGTCCAGGTaGGTCCCCCATACGGCGATG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPECMRSR*VPHTAM
Trigger: CATCGCCGTATGGGGGACCCACCTGGACCTCATACA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCTTCCCTCCATGCTTaGCACGGATCTGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPSLHA*HGSGGS
Trigger: AGAACCCCCAGATCCGTGCCAAGCATGGAGGGAAGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAACACATTTGCCTGCCTaGCTAAAATCGTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLTHLPA*LKSCIC
Trigger: ACAGATGCACGATTTTAGCCAGGCAGGCAAATGTGT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGTGGCTCTGGATACCTaGCTCAAATTTCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHVALDT*LKFLSP
Trigger: GGGACTGAGAAATTTGAGCCAGGTATCCAGAGCCAC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGGAGGTGGAGATGCTaGGCCAGTACATCAACCTTC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGRWRC*ASTSTF
Trigger: GAAGGTTGATGTACTGGCCCAGCATCTCCACCTCCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATGGGGAGGAGGGCAGTaGCATCCAATCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEWGGGQ*HPILPS
Trigger: GGAAGGAAGGATTGGATGCCACTGCCCTCCTCCCCA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCCTGCTGGAAGAGATaGGCTGGCCCCTACATGCTA +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPCWKR*AGPYML
Trigger: TAGCATGTAGGGGCCAGCCCATCTCTTCCAGCAGGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGCCATTGTCTGTTGTaGTACCCTGGAGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSHCLL*YPGVAG
Trigger: ACCAGCAACTCCAGGGTACCACAACAGACAATGGCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCTGGGTCCTCTGGCTaGGCCAAAACCCCTGCATCA +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESGSSG*AKTPAS
Trigger: TGATGCAGGGGTTTTGGCCCAGCCAGAGGACCCAGA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCAACTCTGGGTCCTCTaGCTGGGCCAAAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLQLWVL*LGQNPC
Trigger: GCAGGGGTTTTGGCCCAGCCAGAGGACCCAGAGTTG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCGTCACTGTTGCTCTGTaGGATCGGGGTCCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGVTVAL*DRGPVC
Trigger: ACAGACGGGACCCCGATCCCACAGAGCAACAGTGAC...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CGCTTGGGGCAGAGAAAAGAGACCAACTACCTAGCCAAGCTAAGCAGAGACACATCGGAATGTGACAAATaGCCGCTGCTTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: RLGQRKETNYLAKLSRDTSECDK*PLLLGQ
Trigger: CTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGA...TGTGTCTCTGCTTAGCTTGGCTAGGTAGTTGGTCTCTTTTCTCTGCCCCAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGTGAGCTGCCTCTCTaGCATGATGTAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGELPL*HDVELL
Trigger: GAGCAACTCTACATCATGTCAGAGAGGCAGCTCACC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTCCTTTGATTTGAGCTaGAGCTGTACGACATGGTGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSFDLS*SCTTWW
Trigger: CCACCATGTCGTACAGCTTCAGCTCAAATCAAAGGA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACGCTGCCCTGAATGTTaGGGATGCATTCGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERCPEC*GCIRSH
Trigger: GTGGCTACGAATGCATCCTCAACATTCAGGGCAGCG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCGCTGCTCGCTGCCCTaGATGTTGAGGATGCATTCG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLRCSLP*MLRMHS
Trigger: CGAATGCATCCTCAACATTCAGGGCAGCGAGCAGCG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTCAGGGGATGCTGCTaGTGCCAGTCGGAACTTGCA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLRGCC*CQSELA
Trigger: TGCAAGTTCCGACTGGCATCAGCAGCATCCCCTGAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACTCTGCGATGTCACATaGTGCCCTGTTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELCDVT*CPVPRS
Trigger: GGACCTTGGAACAGGGCATCATGTGACATCGCAGAG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGCTCGGTTAAGTATTTaGCTTCACATTACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLARLSI*LHITVS
Trigger: GGACACAGTAATGTGAAGTCAAATACTTAACCGAGC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTCCTCCTGTCCTCTaGACCTCTCCTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLAPPVL*TSPHPL
Trigger: AAGGGGATGAGGAGAGGTTCAGAGGACAGGAGGAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCTTGGGTCTTCCCATaGCCCATCCCTCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPAWVFP*PIPHRA
Trigger: GGCTCTGTGAGGGATGGGTCATGGGAAGACCCAAGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGCTTGGGTCTTCCCATaGCCCATCCCTCACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEAWVFP*PIPHRA
Trigger: GGCTCTGTGAGGGATGGGTCATGGGAAGACCCAAGC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGTGACAAATGACCGCTaGTTCTGGGACAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLVTNDR*FWDSGA
Trigger: AGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCAC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCAGCCTCAGCAGCTTaGAGATGCCTTGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPASAA*RCLGTG
Trigger: GCCTGTACCAAGGCATCTGCAAGCTGCTGAGGCTGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGGCTGTGTCCTCCTTaGAAAGCCTCACGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERLCPP*KASRAW
Trigger: CCAAGCTCGTGAGGCTTTGCAAGGAGGACACAGCCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGATCTTCTTCAGCTTaGCACTTTTGGTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGSSSA*HFWCPQ
Trigger: TTGTGGGCACCAAAAGTGGCAAGCTGAAGAAGATCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCGGGTGCAAGTGTTGTaGAGCACACACCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLRVQVL*STHQPQ
Trigger: CTGTGGCTGGTGTGTGCTGCACAACACTTGCACCCG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTCTCCGAGGCAAACCTaGGGGGCTCCTTGGACCGCT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSPRQT*GAPWTA
Trigger: AGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCTGGCACCAGCCACATaGGAAGTCTGGGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLLAPAT*EVWVSL
Trigger: AAGGCTGACCCAGACTTCGCATGTGGCTGGTGCCAG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGGGGTTTGTGCACTTaGTTTTGGCACCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGGLCT*FWHQTA
Trigger: AGCTGTCTGGTGCCAAAAGCAAGTGCACAAACCCCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGATCTCCACGAAGCCTaGATGCTGGCTGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPDLHEA*MLAGLG
Trigger: GCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGACATCACCACCACGTTaGTTCCGGCATTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMTSPPR*FRHSGW
Trigger: CCAACCTGAATGCCGGAAGCAACGTGGTGGTGATGT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGCTCCTTCCCTCCATaGTTGGCACGGATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDECSFPP*LARIWG
Trigger: CCCCCAGATCCGTGCCAAGCATGGAGGGAAGGAGCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTTTCTTCTCACAGCTaGAAAGCGATCAGACCACTG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLSSHS*KAIRPL
Trigger: CAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAATGGAAAACAAATTCTaGTTCCAGGGTAGATGCAAC +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTMENKF*FQGRCN
Trigger: GTTGCATCTACCCTGGAAGCAGAATTTGTTTTCCAT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACTTAGTGGCACTATTTaGAGCTACCAAGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGLSGTI*SYQEMS
Trigger: TGACATTTCTTGGTAGCTGCAAATAGTGCCACTAAG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCTGTGGGTAACTCCTaGTTCTTCCTGGGAACAGTC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPVGNS*FFLGTV
Trigger: GACTGTTCCCAGGAAGAAGCAGGAGTTACCCACAGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTACATCAACCTTCACTaGTGGTGGGCGCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMYINLH*WWAQVA
Trigger: AGCTACCTGCGCCCACCAGCAGTGAAGGTTGATGTA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGGGGGAGGTGGAGATaGTGGGCCAGTACATCAACC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLWGRWR*WASTST
Trigger: GGTTGATGTACTGGCCCAGCATCTCCACCTCCCCCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGACAGAGGCTATGTGTaGAGGAGAGACACGGTGGAA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMDRGYV*RRDTVE
Trigger: TTCCACCGTGTCTCTCCTGCACACATAGCCTCTGTC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGAGCTGGCTGGGGCTaGTCACTGGGCTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRAGWG*SLGSLF
Trigger: GAACAGTGAGCCCAGTGAGCAGCCCCAGCCAGCTCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATCACCTCACTACCTCTaGCAATACAAACAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSPHYL*QYKQKV
Trigger: AACTTTCTGTTTGTATTGGCAGAGGTAGTGAGGTGA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGAACAGAGATAACCTaGCCTACCTCCTTCAACGGC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGTEIT*PTSFNG
Trigger: GCCGTTGAAGGAGGTAGGGCAGGTTATCTCTGTTCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACGCTCTCGGCGCCTCTaGGCGCCTCTCTGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQRSRRL*APLWVA
Trigger: CGCTACCCAGAGAGGCGCGCAGAGGCGCCGAGAGCG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGGGGTGGGTAACACTTaGGGTTGTCCTCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSGVGNT*GCPRPA
Trigger: GGCCGGACGAGGACAACCCCAAGTGTTACCCACCCC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACTCCGGCTGGAGATGGTaGGAAAATACTCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHSGWRW*ENTRAS
Trigger: GGAAGCCCGAGTATTTTCCCACCATCTCCAGCCGGA...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACCCGCCTCAGAGTTCTTaGTCAGTTTCCGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHPPQSS*SVSGWR
Trigger: TCTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGG...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCTGCTCCTTGGTGGTaGAGCCTGGTGGAGACACCA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPAPWW*SLVETP
Trigger: TGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGGTCATCATCTGGATaGACTCCAAGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRSSSG*TPRVLP
Trigger: TGGCAGGACCCTTGGAGTCCATCCAGATGATGACCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTCCTCCTAGGTCATCATCTGGATaGACTCCAAGGGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: IGAHDTKCFHFLRHSPPPRSSSG*TPRVLP
Trigger: TGGCAGGACCCTTGGAGTCCATCCAGATGATGACCT...AGGAGGAGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGAGATATTGTTGGGATaGACCGTCAGCCGGACACAC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMEILLG*TVSRTH
Trigger: GTGTGTCCGGCTGACGGTCCATCCCAACAATATCTC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGACGGAGATATTGTTaGGATGGACCGTCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRRRYC*DGPSAG
Trigger: TCCGGCTGACGGTCCATCCCAACAATATCTCCGTCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTCCGGGGCACCTCCTTaGCTGCAGGGGAGTAGCACT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSGAPP*LQGSST
Trigger: AGTGCTACTCCCCTGCAGCCAAGGAGGTGCCCCGGA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGCCACATGCGAAGTCTaGGTCAGCCTTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLATCEV*VSLEAQ
Trigger: CTGTGCCTCAAGGCTGACCCAGACTTCGCATGTGGC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGATGGAGATCGCCTGTaGAAGAGACAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMDGDRL*KRQGCF
Trigger: AAAGCAGCCCTGTCTCTTCCACAGGCGATCTCCATC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGTATGAGGTCCAGGTaGGTCCCCCATACGGCGATG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLCMRSR*VPHTAM
Trigger: CATCGCCGTATGGGGGACCCACCTGGACCTCATACA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCCTTCCCTCCATGCTTaGCACGGATCTGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLPSLHA*HGSGGS
Trigger: AGAACCCCCAGATCCGTGCCAAGCATGGAGGGAAGG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGTCAGGTCTGACTGGTaGTCAGGACCCAGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEVRSDW*SGPRAR
Trigger: CCTCGCTCTGGGTCCTGACCACCAGTCAGACCTGAC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTCAGCTCCCTTGCCATaGGCCTGGCCATTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLSAPLP*AWPFLD
Trigger: GTCCAAGAATGGCCAGGCCCATGGCAAGGGAGCTGA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTCTCTGACATCTTCTaGTCAGCTCCCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLSDIF*SAPLPW
Trigger: CCATGGCAAGGGAGCTGACCAGAAGATGTCAGAGAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCACTGGCTGAACCACTaGAGATGGAACTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMHWLNH*RWNCGK
Trigger: CTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGACTTTGCTGGAAATaGTGTGGTTTCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGLCWK*CGFFPK
Trigger: CTTGGGGAAGAAACCACACCATTTCCAGCAAAGTCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGGAAGGACAAAGAATaGGTAAAAGCTGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGKDKE*VKAASG
Trigger: CCCAGATGCAGCTTTTACCCATTCTTTGTCCTTCCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATTTAGGGGCTGGCTTTaGGTGCAGGGATCATGCTGC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEFRGWL*VQGSCC
Trigger: GCAGCATGATCCCTGCACCCAAAGCCAGCCCCTAAA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTAGGCTTTAGGGGCTaGCTTTGGGTGCAGGGATCA +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVGFRG*LWVQGS
Trigger: TGATCCCTGCACCCAAAGCCAGCCCCTAAAGCCTAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTTGTGGATCCTCGGATaGGGACCCATAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLLWILG*GPIGPW
Trigger: CCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGGGGAGGAGGGCAGTaGCATCCAATCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLWGGGQ*HPILPS
Trigger: GGAAGGAAGGATTGGATGCCACTGCCCTCCTCCCCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCCTACATGCTAAAGTaGGGAGGAGGGCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPYMLK*GGGQWH
Trigger: ATGCCACTGCCCTCCTCCCCACTTTAGCATGTAGGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCACTGGCCAGGCGACTTaGCTGCAGAAGTGGACAGAT +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGTGQAT*LQKWTD
Trigger: ATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAGT...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGATCACTCCAAAGACTaGGCCGCTCTCGTTGACACC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDHSKD*AALVDT
Trigger: GGTGTCAACGAGAGCGGCTCAGTCTTTGGAGTGATC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCCACTGCCGTGGCAATaGACAGCTTGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLPLPWQ*TACHPG
Trigger: ACCTGGATGACAAGCTGTTCATTGCCACGGCAGTGG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCACTGCCGTGGCAATaGACAGCTTGTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPLPWQ*TACHPG
Trigger: ACCTGGATGACAAGCTGTTCATTGCCACGGCAGTGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGCCTCTACATAGGAGTTaGAGGCTGTGTCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEPLHRS*RLCPPC
Trigger: GCAAGGAGGACACAGCCTTCAACTCCTATGTAGAGG...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAACAGTGGGGGTCGCCTaGGCCAAGGCACTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQTVGVA*AKALAA
Trigger: TGCGGCGAGTGCCTTGGCTCAGGCGACCCCCACTGT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCAGTTGACGCCAGCTaGCAGCTCCGGGACATTGTA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPAVDAS*QLRDIV
Trigger: TACAATGTCCCGGAGCTGTCAGCTGGCGTCAACTGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCGCTGCTCGCTGCCCTaGATGTTGAGGATGCATTCG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRCSLP*MLRMHS
Trigger: CGAATGCATCCTCAACATTCAGGGCAGCGAGCAGCG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTCAGGTTGGTGCCTGTaGTGGTCACTTGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSGWCL*WSLGSL
Trigger: GAGGGACCCAAGTGACCATCACAGGCACCAACCTGA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGGGTCTTCCACATACTaGAAGACCAGGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLGSSTY*KTRSWW
Trigger: CCACCAGGACCTGGTCTTTCAGTATGTGGAAGACCC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCGGACGTGCGGGTCATaGATGCCATGTTTATCAGCC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLRTCGS*MPCLSA
Trigger: GGCTGATAAACATGGCATTCATGACCCGCACGTCCG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTACTAGGATTCAGATaGAAAGGTCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLLGFR*KGQEHL
Trigger: GAGATGCTCCTGACCTTTTCATCTGAATCCTAGTAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTCTGGACAGCCCAGTaGCAAAGTCATCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVWTAQ*QSHLHS
Trigger: GCTATGCAGATGACTTTGTCACTGGGCTGTCCAGAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAATGATGAGAGACAGCTaGGATGTTGATGAAATCATT +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGMMRDS*DVDEII
Trigger: AATGATTTCATCAACATCTCAGCTGTCTCTCATCAT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGTGTTGAAATGTCCTaGAGCTGCAGGATGAATGGA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSVEMS*SCRMNG
Trigger: TCCATTCATCCTGCAGCTTCAGGACATTTCAACACT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATGGGAGGGAATAAAATaGTCAAGGATAGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTWEGIK*SRIEKS
Trigger: TGACTTTTCTATCCTTGATCATTTTATTCCCTCCCA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGAGACACGGTGGAATaGGGAGGGACAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRDTVE*GGTGRM
Trigger: CATCCTCCCTGTCCCTCCTCATTCCACCGTGTCTCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGGGAATGGAATAAAGTaGGGCTCCCGCAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLGNGIK*GSRNPG
Trigger: TCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGCCTGGATTGCGGCTaGCTTCTGTGCACGAAAGTG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLCLDCG*LLCTKV
Trigger: CACTTTCGTGCACAGAAGTCAGCCGCAATCCAGGCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCACACGTCGGCTCGCTaGGCCATTGTCTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPHTSAR*AIVCCG
Trigger: ACCACAACAGACAATGGCTCAGCGAGCCGACGTGTG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCCTTCTCTAGCATTTaGAGCTCAACTCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPFSSI*SSTLGP
Trigger: AGGACCCAGAGTTGAGCTTCAAATGCTAGAGAAGGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGCCAGAATATGGACAGTaGGACACAGAGGGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEPEYGQ*DTEGLP
Trigger: AGGCAACCCCTCTGTGTCTCACTGTCCATATTCTGG...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGACAGCGGGGCTGGCTaGCGGGTGAGCAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKDSGAG*RVSKVE
Trigger: CTCCACTTTGCTCACCCGGCAGCCAGCCCCGCTGTC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTGACAAATGACCGCTaGTTCTGGGACAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVTNDR*FWDSGA
Trigger: AGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTCCGGCCCTGTCTCATaGGTCACCAAGACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSGPVS*VTKTFR
Trigger: CCTGAAGGTCTTGGTGACGCATGAGACAGGGCCGGA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGCAGGTCTGGACGATaGGGGGTGGGTAACACTTGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDECRSGR*GVGNTW
Trigger: CCAAGTGTTACCCACCCCGCATCGTCCAGACCTGCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGACGTACGCGAACATaGCATCCGCCTCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERRTRT*HPPQSS
Trigger: AGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGGGTACTCCACCCCACTaGGCTCACAGCCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: ENYTVVYPPGTIRGLVWWGTPPH*AHSQWA
Trigger: TGCCCATTGGCTGTGAGCGCAGTGGGGTGGAGTACC...CCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGAAGACAAAGCTGGTaGTGGCGAAGGTCATGCCGG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLRRQSW*WRRSCR
Trigger: CCGGCATGACCTTCGCCAGCACCAGCTTTGTCTTCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTACTCCAGCTTGCTCTaGAGCACGGTCATGATGAGT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMYSSLL*STVMMS
Trigger: ACTCATCATGACCGTGCTGCAGAGCAAGCTGGAGTA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCCATGTTTATCAGCCTaGTCATCCAGGAAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHPCLSA*SSRKSN
Trigger: GTTTGACTTCCTGGATGAGCAGGCTGATAAACATGG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATCTGGTCAGCTCCCTTaGCATGGGCCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESGQLP*HGPGHS
Trigger: AGAATGGCCAGGCCCATGGCAAGGGAGCTGACCAGA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCAGCCCCTGGATGTTTaGTCTGCCAGTGGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPQPLDV*SASGVR
Trigger: CCTTACCCCACTGGCAGAGCAAACATCCAGGGGCTG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGCAGAAGCCAGACATaGAACGGGAGACACGGTACC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGRSQT*NGRHGT
Trigger: GGTACCGTGTCTCCCGTTGCATGTCTGGCTTCTGCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCTGGGCCTTGTGCCTaGAGAGCACCTTCCTACCTA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSGPCA*RAPSYL
Trigger: TAGGTAGGAAGGTGCTCTGCAGGCACAAGGCCCAGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAGCCCTTCCAAAATGTaGTTGAGTCAAAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSPSKM*LSQKIK
Trigger: TTTGATCTTTTGACTCAAGCACATTTTGGAAGGGCT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCTGGAGTTGCTGGTTaGTATGGTAACTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPGVAG*YGNSAG
Trigger: TCCTGCTGAGTTACCATAGCAACCAGCAACTCCAGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAATGATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTTTCCAGAGTCACTGTTaGTCTGTGGGATCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EMIGAHDTKCFHFLRHSPFQSHC*SVGSGS
Trigger: GGACCCCGATCCCACAGAGCAACAGTGACTCTGGAA...AGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTATCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp ATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTCCTCCTCTCTCCTGGACCAGATaGCAACAGAGCTTTTGCACA +
Preference number: 4 (lower is better)
Translates to: IGAHDTKCFHFLRHSPPPLSWTR*QQSFCT
Trigger: TGTGCAAAAGCTCTGTTGGCATCTGGTCCAGGAGAG...AGGAGGAGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACGGGACTCACTTTCAGTaGAAGCACACAGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYGTHFQ*KHTDEG
Trigger: ACCTTCATCTGTGTGCTTGCACTGAAAGTGAGTCCC...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AACAGCCATGCTTCAATGCACACAGAGCCAGTTTCACATGGAACTCCTGGGACGCCATCCCTATGCAGGTaGACATGGCCTGTTACAAAC +
Preference number: 4 (lower is better)
Translates to: NSHASMHTEPVSHGTPGTPSLCR*TWPVTN
Trigger: GTTTGTAACAGGCCATGTGCACCTGCATAGGGATGG...CGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTTGCAGTCTCCCCTACTaGACGCGCCGCGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: ELHCCVSSRNYTRFSVVVCSLPY*TRRVSL
Trigger: GAGGGAAACGCGGCGCGTCCAGTAGGGGAGACTGCA...AACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTAATGACCGCTGCTTCTaGGACAGCGGGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ELHCCVSSRNYTRFSVVVNDRCF*DSGAGC
Trigger: GCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATT...AACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACTGGACGATGCGGGGTaGGTAACACTTGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDELDDAG*VTLGVV
Trigger: GACAACCCCAAGTGTTACCCACCCCGCATCGTCCAG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGGTGGTGGAGCCTGGTaGAGACACCATCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEGGGAW*RHHLRL
Trigger: CAACCTGAGATGGTGTCTCCACCAGGCTCCACCACC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGTGGTGGAGCCTGGTaGAGACACCATCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGGGAW*RHHLRL
Trigger: CAACCTGAGATGGTGTCTCCACCAGGCTCCACCACC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTACACCTGCTCCTTGGTaGTGGAGCCTGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPTPAPW*WSLVET
Trigger: TGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTGCACCGTCTCATACTaGAGGGCGTTGCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSCTVSY*RALPLG
Trigger: ACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGAGATATTGTTGGGATaGACCGTCAGCCGGACACAC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEEILLG*TVSRTH
Trigger: GTGTGTCCGGCTGACGGTCCATCCCAACAATATCTC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCAGCAACCTTGACATaGGAGGCGATGTCGCGAAAT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPATLT*EAMSRN
Trigger: ATTTCGCGACATCGCCTCCCATGTCAAGGTTGCTGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCATGCTGGCTGGGCTTaGCCTCCCCCATCTCACACA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSHAGWA*PPPSHT
Trigger: TGTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCAATCCGCACGATGGTaGGGTCTTCCACATACTGAA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMQSARW*GLPHTE
Trigger: TTCAGTATGTGGAAGACCCCACCATCGTGCGGATTG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGCTCAATCCGCACGATaGTGGGGTCTTCCACATACT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEAQSAR*WGLPHT
Trigger: AGTATGTGGAAGACCCCACCATCGTGCGGATTGAGC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGACTCGCAGAGCAGCTaGACATCTGACACGGTCACG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPDSQSS*TSDTVT
Trigger: CGTGACCGTGTCAGATGTCCAGCTGCTCTGCGAGTC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACACTGGCTGAACCACTaGAGATGGAACTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEHWLNH*RWNCGK
Trigger: CTTCCCACAGTTCCATCTCCAGTGGTTCAGCCAGTG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCAGGCAGGTCCCTCTaGAGACCTGGAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPAGRSL*RPGKGQ
Trigger: CTGTCCTTTTCCAGGTCTCCAGAGGGACCTGCCTGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCAGGAGCATCTCCATaGTGGAATGTAATTGCTATT +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSGASP*WNVIAI
Trigger: AATAGCAATTACATTCCACCATGGAGATGCTCCTGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATACACATTTGCCTGCCTaGCTAAAATCGTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHTHLPA*LKSCIC
Trigger: ACAGATGCACGATTTTAGCCAGGCAGGCAAATGTGT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGGGCTCATTCTGAGTaGGTGACAAGGAATGATGTC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGAHSE*VTRNDV
Trigger: GACATCATTCCTTGTCACCCACTCAGAATGAGCCCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAATCAACCTTCACTGCTaGTGGGCGCAGGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEINLHC*WAQVAG
Trigger: CCCAGCTACCTGCGCCCACCAGCAGTGAAGGTTGAT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTACGGTACCAGGGACCTaGTTGCATGGGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSTVPGT*LHGGGG
Trigger: TCCACCTCCCCCATGCAACCAGGTCCCTGGTACCGT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTGGATAAATCGCCCTaGGACAGAGGCTATGTGTGC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVDKSP*DRGYVC
Trigger: GCACACATAGCCTCTGTCCCAGGGCGATTTATCCAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTTGTGGATCCTCGGATaGGGACCCATAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPLWILG*GPIGPW
Trigger: CCAAGGCCCTATGGGTCCCCATCCGAGGATCCACAA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGATTCTTCTTGCAGTaGAGGTCATTTGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGFFLQ*RSFGKS
Trigger: TGACTTCCCAAATGACCTCCACTGCAAGAAGAATCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCTTTCCCTCACTGCTTaGCTGTCTGTGAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLLSLTA*LSVRWE
Trigger: CTCCCACCTCACAGACAGCCAAGCAGTGAGGGAAAG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATTTGAAGCTCAACTCTaGGTCCTCTGGCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEFEAQL*VLWLGQ
Trigger: TTGGCCCAGCCAGAGGACCCAGAGTTGAGCTTCAAA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGAAGTGGGATGGGGCTaGAAGGGGGTGACTGGAACA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEEVGWG*KGVTGT
Trigger: TGTTCCAGTCACCCCCTTCCAGCCCCATCCCACTTC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGAAGTGGGATGGGGCTaGAAGGGGGTGACTGGAACA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPEVGWG*KGVTGT
Trigger: TGTTCCAGTCACCCCCTTCCAGCCCCATCCCACTTC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp TTCCCTCACTGCTTGGCTGTCTGTGAGGTGGGAGGTTaGTCCTTGACTGATAACAATACTGGCCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FPHCLAVCEVGG*SLTDNNTGPLL
Trigger: GAGCAAAGGGCCAGTATTGTTATCAGTCAAGGACAAACCTCCCACCTCACAGACAGCCAAGCAGTGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp TGGAAGAAGAGCTGCATAGACCAAGTCTACTTGCTTTaGCAATCCTGGCGGAGGGAAAGCTTGGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: WKKSCIDQVYLL*QSWRRESLGLP
Trigger: GGGAAGACCCAAGCTTTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTTGGTCTATGCAGCTCTTCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCGGAATGTGACAAATaGCCGCTGCTTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSECDK*PLLLGQ
Trigger: CTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCTGAGCCGCTCTCGTTaGCACCTGACAGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPLSRSR*HLTDSA
Trigger: AGCACTATCTGTCAGGTGTCAACGAGAGCGGCTCAG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCAACTCTTTCAAAGTCCTTGCTTTACCCATCCCTATGCAGGTGCACATGGCCTCCTTGGAGAAGACGGTaGAGAGCAGGTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: STLSKSLLYPSLCRCTWPPWRRR*RAGHHL
Trigger: CAGATGATGACCTGCTCTTCACCGTCTTCTCCAAGG...AGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CGCTTGGGGCAGAGAAAAGAGACCAACTACCTAGCCAAGCTAAGCAGAGACACATTATCTGCTTCAAGATaGAGATGCACAGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: RLGQRKETNYLAKLSRDTLSASR*RCTGPT
Trigger: AGTCGGCCCTGTGCATCTTCATCTTGAAGCAGATAA...TGTGTCTCTGCTTAGCTTGGCTAGGTAGTTGGTCTCTTTTCTCTGCCCCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGCTGCCTCTCTGACATaGTGTAGAGTTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLAASLT*CRVARG
Trigger: ACCACGAGCAACTCTACATCATGTCAGAGAGGCAGC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCGGTCTCCTTTGATTTaGGCTGAAGCTGTACGACAT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRSPLI*AEAVRH
Trigger: ATGTCGTACAGCTTCAGCTCAAATCAAAGGAGACCG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCGGGATTATCTCTGTaGTGCGGGGGTTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPGLSL*CGGLCT
Trigger: AGTGCACAAACCCCCGCATCACAGAGATAATCCCGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGAGCTCCAGGATTCCTaGGGGACCAAAGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEELQDS*GTKGLK
Trigger: TTTGAGGCCTTTGGTCCCTCAGGAATCCTGGAGCTC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGACCCTTGATGAAGGTTaGCAAAGGAGGGTGGAGATA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMTLDEG*QRRVEI
Trigger: TATCTCCACCCTCCTTTGTCAACCTTCATCAAGGGT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGTCTGGACAGCCCAGTaGCAAAGTCATCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLVWTAQ*QSHLHS
Trigger: GCTATGCAGATGACTTTGTCACTGGGCTGTCCAGAC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGATTACTTTCCAAATaGGAGGAGTGGTCATTTAGG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGLLSK*EEWSFR
Trigger: CCTAAATGACCACTCCTCTCATTTGGAAAGTAATCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTGGGAGCTTTAGTTTaGAACAGAAGTGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVGALV*NRSGMG
Trigger: CCCCATCCCACTTCTGTTTCAAACTAAAGCTCCCAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGACAGCGGGGCTGGCTaGCGGGTGAGCAAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQDSGAG*RVSKVE
Trigger: CTCCACTTTGCTCACCCGGCAGCCAGCCCCGCTGTC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCCAGCCTCAGCAGCTTaGAGATGCCTTGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSPASAA*RCLGTG
Trigger: GCCTGTACCAAGGCATCTGCAAGCTGCTGAGGCTGG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCTTGGATGTATACACCTaGTCCTTGGTGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGLDVYT*SLVVEP
Trigger: AGGCTCCACCACCAAGGAGCAGGTGTATACATCCAA...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTATGCGGTCATTTATCTaGTTCAAGATGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: CCSTVGSILSALCMHTHLMRSFI*FKMKMH
Trigger: GTGCATCTTCATCTTGAAGCAGATAAATGACCGCAT...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGGTTAAGAGCGCACTaGTGCAGGGGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLWLRAH*CRGCPS
Trigger: TGAAGGACATCCCCTGCAGCAGTGCGCTCTTAACCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTTGCCACTTTTGGTaGCCACAAAGGCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLACHFW*PQRPES
Trigger: ACTCTCTGGCCTTTGTGGGCACCAAAAGTGGCAAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTCAGCCGGACACACTaGTTCATCTCCGAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVSRTH*FISEAN
Trigger: GTTTGCCTCGGAGATGAAGCAGTGTGTCCGGCTGAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGCACTGGATCTGATTaGCCACGACCAGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSTGSD*PRPAHP
Trigger: TGGATGGGCTGGTCGTGGGCAATCAGATCCAGTGCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCATGGGTGCAGACATaGCGGTATTTACACCAGTGG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESWVQT*RYLHQW
Trigger: CCACTGGTGTAAATACCGGCATGTCTGCACCCATGA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTGGCACCAGCCACATaGGAAGTCTGGGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLAPAT*EVWVSL
Trigger: AAGGCTGACCCAGACTTCGCATGTGGCTGGTGCCAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCATCCACTAAAGGGCTaGACTCCACGCCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPHPLKG*TPRQQP
Trigger: AGGTTGCTGGCGTGGAGTGCAGCCCTTTAGTGGATG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCGGGGAGTACTCCATaGCACCGACACGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPGSTP*HRHGPS
Trigger: TGATGGCCCGTGTCGGTGGCATGGAGTACTCCCCGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACTCCAGATCCATATCTaGAGCTTTGGGCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDELQIHI*SFGPVG
Trigger: TCCCACCGGCCCAAAGCTGCAGATATGGATCTGGAG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGAGAGAAACAGCGCTaGTCAGGGGATGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLREKQR*SGDAAD
Trigger: ATCAGCAGCATCCCCTGAGCAGCGCTGTTTCTCTCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCTGCTCCAGCCACATaGAGGAGGTGTAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPAPAT*RRCSLS
Trigger: AGAAAGGCTACACCTCCTGCATGTGGCTGGAGCAGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTACTCCAGAGCAGAGGTaGCAACAGAGACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLTPEQR*QQRLLL
Trigger: AAGCAGGAGTCTCTGTTGGCACCTCTGCTCTGGAGT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGACAGAGGCTATGTGTaGAGGAGAGACACGGTGGAA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDRGYV*RRDTVE
Trigger: TTCCACCGTGTCTCTCCTGCACACATAGCCTCTGTC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATCTGGGCCTTGTGCCTaGAGAGCACCTTCCTACCTA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESGPCA*RAPSYL
Trigger: TAGGTAGGAAGGTGCTCTGCAGGCACAAGGCCCAGA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAAGCCCTTCCAAAATGTaGTTGAGTCAAAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSPSKM*LSQKIK
Trigger: TTTGATCTTTTGACTCAAGCACATTTTGGAAGGGCT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGCCATGCTTCAATGCACACAGAGCCAGTTTCACATGGAACTCCTGGGACGGCATCTTCTTCAGCTTaGCACTTTTGGTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: NSHASMHTEPVSHGTPGTASSSA*HFWCPQ
Trigger: TTGTGGGCACCAAAAGTGGCAAGCTGAAGAAGATGC...CGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACCCTGTTACAAACCTCTaGCTCCAGAATATGGACAGT +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYPVTNL*LQNMDS
Trigger: ACTGTCCATATTCTGGAGGCAGAGGTTTGTAACAGG...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GACACAGAGGGGTTGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCTGGTCAGTTTCCGGCTaGAGATGGTGGGAAAATACT +
Preference number: 4 (lower is better)
Translates to: DTEGLPALTKSPALGLTFWSVSG*RWWENT
Trigger: AGTATTTTCCCACCATCTCCAGCCGGAAACTGACCA...GAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGAGCAGGTCATCATCTaGATGGACTCCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLEQVII*MDSKGP
Trigger: AGGACCCTTGGAGTCCATCCAGATGATGACCTGCTC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACATATCCCGGAGGACTaGGCCGGGGTCCACCACCTG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQHIPED*AGVHHL
Trigger: CAGGTGGTGGACCCCGGCCCAGTCCTCCGGGATATG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTTGCTCGTGGTCCTTaGAGAAGGCCATATCCCGGA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVARGP*RRPYPG
Trigger: TCCGGGATATGGCCTTCTCCAAGGACCACGAGCAAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGACAGCTCCAGCCACTaGCTCTCCTGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQDSSSH*LSWAGQ
Trigger: CTGCCCTGCCCAGGAGAGCCAGTGGCTGGAGCTGTC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCCTCATCTGAGGATGTaGTGTTGCAGACAATGTAGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMPHLRM*CCRQCR
Trigger: CCTACATTGTCTGCAACACCACATCCTCAGATGAGG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAAGACCAGGTCCTGGTaGATCTTGGCCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSKTRSW*ILALST
Trigger: GGTGGACAGGGCCAAGATCCACCAGGACCTGGTCTT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTCCCGGAGGACAGGGTaGTCTTCAATTCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSRRTG*SSIPGN
Trigger: GTTCCCAGGAATTGAAGACCACCCTGTCCTCCGGGA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTTCAGCACATCAGTaGCGTACTCCAGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLASAHQ*RTPACS
Trigger: AGAGCAAGCTGGAGTACGCCACTGATGTGCTGAAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCTGTTGGCATTGTCTaGGCTGACACAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPAVGIV*ADTAQD
Trigger: GTCCTGAGCTGTGTCAGCCCAGACAATGCCAACAGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTTGAGGATCTTTACTaGGACCTCGGGGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVEDLY*DLGAVG
Trigger: GCCAACAGCCCCGAGGTCCCAGTAAAGATCCTCAAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCCATATCTGCAGCTTTaGGCCGGTGGGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSPYLQL*AGGSKA
Trigger: TGCCTTGCTCCCACCGGCCCAAAGCTGCAGATATGG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGGCTGTCACCTGCTTaGACACTAATGCCACCACGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRLSPA*TLMPPR
Trigger: CCGTGGTGGCATTAGTGTCCAAGCAGGTGACAGCCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGGTCCTGGAGACGGTaGAGTTGTTCACTGCGTTAT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERSWRR*SCSLRY
Trigger: ATAACGCAGTGAACAACTCCACCGTCTCCAGGACCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCACACTGGTCATCGTaGTCCAGAGGTCCAAGGATC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPHWSS*SRGPRI
Trigger: GATCCTTGGACCTCTGGACCACGATGACCAGTGTGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAATGTCCCCTGTCCCTaGCTCCTCATTCGTTATTTG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMNVPCP*LLIRYL
Trigger: CAAATAACGAATGAGGAGCCAGGGACAGGGGACATT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAAGCGATCAGACCACTaGCTGAACCACTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLKRSDH*LNHWRW
Trigger: CCATCTCCAGTGGTTCAGCCAGTGGTCTGATCGCTT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGTCCCTCTGGAGACCTaGAAAAGGACAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEVPLET*KRTGSL
Trigger: GAGGCTTCCTGTCCTTTTCCAGGTCTCCAGAGGGAC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGCAGGCAGGTCCCTCTaGAGACCTGGAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSAGRSL*RPGKGQ
Trigger: CTGTCCTTTTCCAGGTCTCCAGAGGGACCTGCCTGC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCAAGCTTCTCCACCTaGTACTGCACTTGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSSFST*YCTCQN
Trigger: GTTTTGGCAAGTGCAGTACCAGGTGGAGAAGCTTGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCACATGTACCCTTTCTaGCCTTCCAGGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLHMYPF*PSRSCD
Trigger: GTCACAGGACCTGGAAGGCCAGAAAGGGTACATGTG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGATGGGCTGTGGCTCTaGATACCTGGCTCAAATTTC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEDGLWL*IPGSNF
Trigger: GAAATTTGAGCCAGGTATCCAGAGCCACAGCCCATC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAAGCAAGATGGGCTGTaGCTCTGGATACCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLKQDGL*LWIPGS
Trigger: TGAGCCAGGTATCCAGAGCCACAGCCCATCTTGCTT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGTTTGCTCTGCCAGTaGGGTAAGGAAGATCCCTGG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLCLLCQ*GKEDPW
Trigger: CCAGGGATCTTCCTTACCCCACTGGCAGAGCAAACA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACACATGGACAGCCCCTaGATGTTTGCTCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEHMDSP*MFALPV
Trigger: CACTGGCAGAGCAAACATCCAGGGGCTGTCCATGTG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAGCCCGCAAGCCACATaGACAGCCCCTGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSPQAT*TAPGCL
Trigger: CAAACATCCAGGGGCTGTCCATGTGGCTTGCGGGCT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGAGGTGACTCAGTCATaGAAAGACCCCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLEVTQS*KDPLKA
Trigger: GGCCTTCAAGGGGTCTTTCCATGACTGAGTCACCTC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACATGAGCTATGATGTATaGCTGGGGTCACAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHMSYDV*LGSQGG
Trigger: ACCTCCCTGTGACCCCAGCCATACATCATAGCTCAT...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCGTCCAAAATTACCCATaGGACGCTTGGGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGVQNYP*DAWGRE
Trigger: TTCTCTGCCCCAAGCGTCCCATGGGTAATTTTGGAC...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACATTATGGAATTGTGCTaGATAGTGGCCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYIMELC*IVAMQE
Trigger: CTCCTGCATGGCCACTATCCAGCACAATTCCATAAT...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 72 bp ACAGAGGGGTTGCCTGCTCTCACTAAATCTCCAGCTTaGGGACTCACTTTCAGTGCAAGCACACAGATGAAG +
Preference number: 4 (lower is better)
Translates to: TEGLPALTKSPA*GLTFSASTQMK
Trigger: CTTCATCTGTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGCTCTCCTCGGAATGTaGCAAATGACCGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEALLGM*QMTAAS
Trigger: AGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTGAGCCGCTCTCGTTaGCACCTGACAGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLSRSR*HLTDSA
Trigger: AGCACTATCTGTCAGGTGTCAACGAGAGCGGCTCAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCTGCCTCTCTGACATaGTGTAGAGTTGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPAASLT*CRVARG
Trigger: ACCACGAGCAACTCTACATCATGTCAGAGAGGCAGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACGGTCTCCTTTGATTTaGGCTGAAGCTGTACGACAT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPERSPLI*AEAVRH
Trigger: ATGTCGTACAGCTTCAGCTCAAATCAAAGGAGACCG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCATGCCGGTCTCCTTTaGTTTGAGCTGAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLHAGLL*FELKLY
Trigger: GTACAGCTTCAGCTCAAATCAAAGGAGACCGGCATG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGTCTGGGTCAGCCTTaGGGCACAGCCCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSLGQP*GTARSS
Trigger: AGAGCTGCGGGCTGTGCCTCAAGGCTGACCCAGACT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGGACGTTGTCCAGGATaGAGCCAAACTCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKGRCPG*SQTPRA
Trigger: GGCCCGAGGAGTTTGGCTTCATCCTGGACAACGTCC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCATCTTCTCAGCCACTaGCTCAGTCCTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSHLLSH*LSPPEQ
Trigger: CTGCTCAGGAGGACTGAGTCAGTGGCTGAGAAGATG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGATAGGAGAAGATCTCTaGGAGTGCACTCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMIGEDL*ECTHGV
Trigger: AACACCATGAGTGCACTCTCAGAGATCTTCTCCTAT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTATAGATGCTTTCTCTTaGCAGCACTCAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLIDAFS*QHSGLW
Trigger: CCAGAGCCCTGAGTGCTGTCAAGAGAAAGCATCTAT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTTAGTCCTGTTTGGTaGAGTGGTCTCGGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLSPVW*SGLGFL
Trigger: TAAGAAACCGAGACCACTTCACCAAACAGGACTAAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTGCCTGGATTGCGGCTaGCTTCTGTGCACGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSCLDCG*LLCTKV
Trigger: CACTTTCGTGCACAGAAGTCAGCCGCAATCCAGGCA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTCCCTAAGGACTTGGGGTGGCAGGACATGAGCTATGATGTATGGCTGGGGTCAGATGGTTCTGAGCACTaGGTTAATTACATGATGCTG +
Preference number: 4 (lower is better)
Translates to: FPKDLGWQDMSYDVWLGSDGSEH*VNYMML
Trigger: CAGCATCATGTAATTAACTCAGTGCTCAGAACCATC...TGACCCCAGCCATACATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAAAATGATAGGAGCACATaGCACCAAGTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKNDRST*HQVFPL
Trigger: AAGTGGAAACACTTGGTGTCATGTGCTCCTATCATT...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AACAGCCATGCTTCAATGCACACAGAGCCAGTTTCACATGGAACTCCTGGGACGGTTCTTGTAGACATATaGGATGACAGACGTCATGCG +
Preference number: 4 (lower is better)
Translates to: NSHASMHTEPVSHGTPGTVLVDI*DDRRHA
Trigger: CGCATGACGTCTGTCATCGCATATGTCTACAAGAAC...CGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACATACTGGAGGGCGTTaGCCCTGGGTCCATCCACCC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQHTGGR*PWVHPP
Trigger: GGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTACATCACCACCACGTTaGTTCCGGCATTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPTSPPR*FRHSGW
Trigger: CCAACCTGAATGCCGGAAGCAACGTGGTGGTGATGT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGGAAGAGACAGGGCTaGTTTCCAAACATCACCACC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLWKRQG*FPNITT
Trigger: GGTGGTGATGTTTGGAAAGCAGCCCTGTCTCTTCCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCACAGATATTGATGTaGTCCTTCCCTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSQILM*SFPPCL
Trigger: CAAGCATGGAGGGAAGGAGCACATCAATATCTGTGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAGTTCAGCTTCACGTTaGCCCCAGCCACAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSSASR*PQPQAG
Trigger: TCCCGCCTGTGGCTGGGGGCAACGTGAAGCTGAACT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACTGACACGGTCACGGTaGACGGCTTCTCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLTRSR*TASPQP
Trigger: TGGTTGGGGAGAAGCCGTGCACCGTGACCGTGTCAG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAGGTCGGCCAGCAGCTaGTTCAGCACATCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKRSASS*FSTSVA
Trigger: CGCCACTGATGTGCTGAAGCAGCTGCTGGCCGACCT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACTGCAAGATCATCCTTaGCCCACTTCCTTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDELQDHP*PTSLSP
Trigger: TGGCGACAAGGAAGTGGGGCAAGGATGATCTTGCAG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCTCCTCGCTGTATTTaGCCACATAGGAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSPRCI*PHRRRS
Trigger: AGATCTTCTCCTATGTGGGCAAATACAGCGAGGAGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTACTGAAGTCCTTCCTTaGCTCTTCCCTAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPTEVLP*LFPRPR
Trigger: CCTTGGCCTAGGGAAGAGGCAAGGAAGGACTTCAGT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGTGACAAAGTCATCTaGATAGCAATGGCACCGGAT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSDKVI*IAMAPD
Trigger: ATCCGGTGCCATTGCTATGCAGATGACTTTGTCACT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGATGGGGAGATGGATaGCAAGGCCAAGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLRWGDG*QGQGHL
Trigger: CAAATGACCTTGGCCTTGGCATCCATCTCCCCATCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAGATGGGGAGATGGATaGCAAGGCCAAGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLRWGDG*QGQGHL
Trigger: CAAATGACCTTGGCCTTGGCATCCATCTCCCCATCT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTACTCCAGAGCAGAGGTaGCAACAGAGACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPTPEQR*QQRLLL
Trigger: AAGCAGGAGTCTCTGTTGGCACCTCTGCTCTGGAGT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTTAAAAGTACCGGATaGTCCATGGACTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLKSTG*SMDFAG
Trigger: TCCAGCAAAGTCCATGGAGCATCCGGTACTTTTAAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACTGTCTTTCCCTCACTaGTTGGCTGTCTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDELSFPH*LAVCEV
Trigger: CACCTCACAGACAGCCAAGCAGTGAGGGAAAGACAG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAGAGCTGGCTGGGGCTaGTCACTGGGCTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKRAGWG*SLGSLF
Trigger: GAACAGTGAGCCCAGTGAGCAGCCCCAGCCAGCTCT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGGAGGCCTTGTTCCTaGTCAAAGCAGCCAACACAC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEWRPCS*SKQPTH
Trigger: GTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTCCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGCCAGGACTCAGCAATaGAGTCTCCCCTGGACGCGC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQARTQQ*SLPWTR
Trigger: GCGCGTCCAGGGGAGACTGCATTGCTGAGTCCTGGC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR GCA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTATTTACACATTGTTTTaGAGGAGTGTTGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: CCSTVGSILSALCMHTHLIYTLF*RSVGPV
Trigger: AACTGGTCCAACACTCCTGCAAAACAATGTGTAAAT...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGAGGCGGGTCCCAGTaGCACAGCAGCACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQRGGSQ*HSSTQA
Trigger: TGCCTGAGTGCTGCTGTGCCACTGGGACCCGCCTCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTTCCAGTTCCAGGGCATaGCTTTCATGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ELHCCVSSRNYTRFSVVVSSSRA*LSWQRR
Trigger: CCGCCTCTGCCATGAAAGCCATGCCCTGGAACTGGA...AACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGGGTGGGTAACACTTaGGGTTGTCCTCGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGVGNT*GCPRPA
Trigger: GGCCGGACGAGGACAACCCCAAGTGTTACCCACCCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCCGCCTCAGAGTTCTTaGTCAGTTTCCGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSPPQSS*SVSGWR
Trigger: TCTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCCACGAACTCATCATaGAAGACGTACGCGAACATG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLATNSS*KTYANM
Trigger: CATGTTCGCGTACGTCTTCCATGATGAGTTCGTGGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGAAAGCCTCACGAGCTTaGATGTATACACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEKASRA*MYTPAP
Trigger: AGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTT...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGAAGTTATCGTCAATaGTTAAGAGCGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRSYRQ*LRAHCC
Trigger: GCAGCAGTGCGCTCTTAACCATTGACGATAACTTCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCGGTATTTACACCAGTaGCAGCGGTATGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRYLHQ*QRYGLS
Trigger: GGAGAGTCCATACCGCTGCCACTGGTGTAAATACCG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACGGTATTTACACCAGTaGCAGCGGTATGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDERYLHQ*QRYGLS
Trigger: GGAGAGTCCATACCGCTGCCACTGGTGTAAATACCG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCAGGTCTTGGGGTCATaGGTGCAGACATGCCGGTAT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSQVLGS*VQTCRY
Trigger: ATACCGGCATGTCTGCACCCATGACCCCAAGACCTG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCAGCAACCTTGACATaGGAGGCGATGTCGCGAAAT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPATLT*EAMSRN
Trigger: ATTTCGCGACATCGCCTCCCATGTCAAGGTTGCTGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCTGTGATGGTCACTTaGGTCCCTCCGGACATGGGC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPVMVT*VPPDMG
Trigger: GCCCATGTCCGGAGGGACCCAAGTGACCATCACAGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGATGGAGATCGCCTGTaGAAGAGACAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPDGDRL*KRQGCF
Trigger: AAAGCAGCCCTGTCTCTTCCACAGGCGATCTCCATC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGGATGAGCAGGGACTaGACGTTGTCCAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRMSRD*TLSRMK
Trigger: CTTCATCCTGGACAACGTCCAGTCCCTGCTCATCCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACTCTCTGACATCTTCTaGTCAGCTCCCTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDELSDIF*SAPLPW
Trigger: CCATGGCAAGGGAGCTGACCAGAAGATGTCAGAGAG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGTCCCTCTGGAGACCTaGAAAAGGACAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSVPLET*KRTGSL
Trigger: GAGGCTTCCTGTCCTTTTCCAGGTCTCCAGAGGGAC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAATGGGGATGGAGCCATaGAGATGGCTGGAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEMGMEP*RWLEVE
Trigger: TTCTACCTCCAGCCATCTCCATGGCTCCATCCCCAT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGGTTGGCTGGCATTTTaGGCTGTCTCCGTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSGWLAF*AVSVRL
Trigger: AAGCCTCACGGAGACAGCCCAAAATGCCAGCCAACC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTCCATGGACTTTGCTaGAAATGGTGTGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLHGLC*KWCGFF
Trigger: GAAGAAACCACACCATTTCCAGCAAAGTCCATGGAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGATTCTTCTTGCAGTaGAGGTCATTTGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGFFLQ*RSFGKS
Trigger: TGACTTCCCAAATGACCTCCACTGCAAGAAGAATCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGCTGGGGCTGCTCACTaGGCTCACTGTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKAGAAH*AHCSWK
Trigger: CTTCCAGGAACAGTGAGCCCAGTGAGCAGCCCCAGC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACATCTGTCAAAAGTGTaGGGAAGCACCAGGAATAGC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEHLSKV*GSTRNS
Trigger: GCTATTCCTGGTGCTTCCCCACACTTTTGACAGATG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTGGAAGGGGGTGACTaGAACAGAGATAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLEGGD*NRDNLP
Trigger: GGGCAGGTTATCTCTGTTCCAGTCACCCCCTTCCAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAACTAAATCTCCAGCTTTaGGACTCACTTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKLNLQL*DSLSVQ
Trigger: TTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAG...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp TCAACTCTTTCAAAGTCCTTGCTTTACCCATCCCTATGCAGGTGCACATGGCCTTCTGCCTCCAGAATATaGACAGTGAGACACAGAGGG +
Preference number: 4 (lower is better)
Translates to: STLSKSLLYPSLCRCTWPSASRI*TVRHRG
Trigger: CCCTCTGTGTCTCACTGTCCATATTCTGGAGGCAGA...AGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 72 bp AACAGTGGTAAGGATTCTTCTTGCAGTGGAGGTCATTaGGGAAGTCATTGCTTGTGGATCCTCGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: NSGKDSSCSGGH*GSHCLWILGWG
Trigger: TCCCCATCCGAGGATCCACAAGCAATGACTTCCCAAATGACCTCCACTGCAAGAAGAATCCTTACCACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp AATTGCTGGAAGAAGAGCTGCATAGACCAAGTCTACTaGCTTTTGCAATCCTGGCGGAGGGAAAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: NCWKKSCIDQVY*LLQSWRRESLG
Trigger: ACCCAAGCTTTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTTGGTCTATGCAGCTCTTCTTCCAGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp GATAACACCACAAGAGTCAAACATGCCTACACTCCATaGTCCAAAATTACCCATGGGACGCTTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: DNTTRVKHAYTP*SKITHGTLGAE
Trigger: CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACTCTTGTGGTGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCCTCTACATAGGAGTTaGAGGCTGTGTCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSPLHRS*RLCPPC
Trigger: GCAAGGAGGACACAGCCTTCAACTCCTATGTAGAGG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCCTTGGAGAAGACGGTaGAGAGCAGGTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSPWRRR*RAGHHL
Trigger: CAGATGATGACCTGCTCTTCACCGTCTTCTCCAAGG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGCAGCACGTTGTACTaGGAGACGGAGATATTGTTG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSSTLY*ETEILL
Trigger: CAACAATATCTCCGTCTCTCAGTACAACGTGCTGCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACTTTGTGCCTGCCGATaGGGTTGGGGGACTCGCAGA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLCACR*GWGTRR
Trigger: TCTGCGAGTCCCCCAACCTCATCGGCAGGCACAAAG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTTCATATTTACTTGCTaGGGTCCTGGAGACGGTGGA +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLFIFTC*GPGDGG
Trigger: TCCACCGTCTCCAGGACCTCAGCAAGTAAATATGAA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCATCTTCCCTATGTCTaGGTAATACCTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLHLPYV*VIPLHP
Trigger: TGGGTGGAGAGGTATTACTCAGACATAGGGAAGATG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGATCAGACCACTGGCTaGACCACTGGAGATGGAACT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSDQTTG*TTGDGT
Trigger: AGTTCCATCTCCAGTGGTTCAGCCAGTGGTCTGATC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTATAGATGCTTTCTCTTaGCAGCACTCAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPIDAFS*QHSGLW
Trigger: CCAGAGCCCTGAGTGCTGTCAAGAGAAAGCATCTAT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTGGGTGACAAGGAATaGTGTCTGATGTTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVGDKE*CLMFGE
Trigger: CTCCCCAAACATCAGACATCATTCCTTGTCACCCAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGACAAGAAATCCTTTTaGGCTTTCCGCCTACACCTG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDKKSF*AFRLHL
Trigger: CAGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGCAAGGACAGCTTTTTaGCAATGTTGCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMARTAF*QCCLSL
Trigger: CAAAGACAAGCAACATTGTCAAAAAGCTGTCCTTGC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCTTCTGTCTGCTCATaGCTCAACATAATGGTGACC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPSVCS*LNIMVT
Trigger: GGTCACCATTATGTTGAGTCATGAGCAGACAGAAGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGGGAGGTTTGTCCTTaGCTGATAACAATACTGGCC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLWEVCP*LITILA
Trigger: GGCCAGTATTGTTATCAGTCAAGGACAAACCTCCCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTTTAAAGGAAGAGGCTaGGGGTTCAAGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSFKGRG*GFKASQ
Trigger: CTGGGAGGCCTTGAACCCTCAGCCTCTTCCTTTAAA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGCTCCTCCTGTCCTCTaGACCTCTCCTCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKAPPVL*TSPHPL
Trigger: AAGGGGATGAGGAGAGGTTCAGAGGACAGGAGGAGC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGATTTTCAGCCTACCTaGATCACCTCACTACCTCTG +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLDFQPT*ITSLPL
Trigger: CAGAGGTAGTGAGGTGATTCAGGTAGGCTGAAAATC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAAATGATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTACTGAGTTAATTACATaGTGCTGCAGTACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EMIGAHDTKCFHFLRHSPTELIT*CCSTVG
Trigger: GCCCACCGTACTGCAGCATCATGTAATTAACTCAGT...AGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTATCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATTGGATGTATACACCTaGTCCTTGGTGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDELDVYT*SLVVEP
Trigger: AGGCTCCACCACCAAGGAGCAGGTGTATACATCCAA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATATGGTTAAGAGCGCACTaGTGCAGGGGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIWLRAH*CRGCPS
Trigger: TGAAGGACATCCCCTGCAGCAGTGCGCTCTTAACCA...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTTCTTGTAGACATATaGGATGACAGACGTCATGCG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVLVDI*DDRRHA
Trigger: CGCATGACGTCTGTCATCGCATATGTCTACAAGAAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGACACACGATCTGTTCTaGAGGGATGTAACCATCCAC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLTHDLF*RDVTIH
Trigger: GTGGATGGTTACATCCCTGCAGAACAGATCGTGTGT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTGGAAGAGACAGGGCTaGTTTCCAAACATCACCACC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPWKRQG*FPNITT
Trigger: GGTGGTGATGTTTGGAAAGCAGCCCTGTCTCTTCCA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCACAGATATTGATGTaGTCCTTCCCTCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESQILM*SFPPCL
Trigger: CAAGCATGGAGGGAAGGAGCACATCAATATCTGTGA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACGGGCCATCACTTTGTaGCTGCCGATGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQRAITL*LPMRLG
Trigger: CCCCAACCTCATCGGCAGGCACAAAGTGATGGCCCG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACGTGCGGGTCATGAATaGCATGTTTATCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDERAGHE*HVYQPA
Trigger: AGCAGGCTGATAAACATGGCATTCATGACCCGCACG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCCTCATTCGTTATTTaGACCCTGCTGCTGACATGC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSSFVI*TLLLTC
Trigger: GCATGTCAGCAGCAGGGTGCAAATAACGAATGAGGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTTTCTTCTCACAGCTaGAAAGCGATCAGACCACTG +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLSSHS*KAIRPL
Trigger: CAGTGGTCTGATCGCTTTGCAGCTGTGAGAAGAAAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTTGCTATTCTTTCTCCTaGCTGGCTTTCTACTGGCGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPCYSFS*LAFYWR
Trigger: CCGCCAGTAGAAAGCCAGGCAGGAGAAAGAATAGCA...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAATGCTCCATGGACTTTaGTGGAAATGGTGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEMLHGL*WKWCGF
Trigger: GAAACCACACCATTTCCAGCAAAGTCCATGGAGCAT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACTTAAAAGTACCGGATaGTCCATGGACTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELKSTG*SMDFAG
Trigger: TCCAGCAAAGTCCATGGAGCATCCGGTACTTTTAAG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCTGGATGTTTGCTCTaGCAGTGGGGTAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPGCLL*QWGKED
Trigger: ATCTTCCTTACCCCACTGGCAGAGCAAACATCCAGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGTGCAGGGATCATGCTaGCATTGGAATGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPVQGSC*HWNVPW
Trigger: CCAAGGTACATTCCAATGGCAGCATGATCCCTGCAC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTACATCAACCTTCACTaGTGGTGGGCGCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSYINLH*WWAQVA
Trigger: AGCTACCTGCGCCCACCAGCAGTGAAGGTTGATGTA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GACACAGAGGGGTTGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCTGCCAACAGAGCTTTTaGACATATGATCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: DTEGLPALTKSPALGLTFCQQSF*TYDQLI
Trigger: GATGAGCTGATCATATGTGCAAAAGCTCTGTTGGCA...GAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGTTTCCGGCTGGAGATaGTGGGAAAATACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSVSGWR*WENTRA
Trigger: AGCCCGAGTATTTTCCCACCATCTCCAGCCGGAAAC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGGTCAGTTTCCGGCTaGAGATGGTGGGAAAATACT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLWSVSG*RWWENT
Trigger: AGTATTTTCCCACCATCTCCAGCCGGAAACTGACCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GACTACACTTTATTTCCCAGTAAGCTAGTAGAAATGATAGGAGCACATGACACCACACCTGCTCCTTGGTaGTGGAGCCTGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: DYTLFPSKLVEMIGAHDTTPAPW*WSLVET
Trigger: TGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGT...GGTGTCATGTGCTCCTATCATTTCTACTAGCTTACTGGGAAATAAAGTGTAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAAAGCCTCACGAGCTTaGATGTATACACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLKASRA*MYTPAP
Trigger: AGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGAGAAGTTATCGTCAATaGTTAAGAGCGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KHAYTPLSKITHGTLGAERSYRQ*LRAHCC
Trigger: GCAGCAGTGCGCTCTTAACCATTGACGATAACTTCT...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGCACCGTCTCATACTaGAGGGCGTTGCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQCTVSY*RALPLG
Trigger: ACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAGACGGAGATATTGTTaGGATGGACCGTCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSRRRYC*DGPSAG
Trigger: TCCGGCTGACGGTCCATCCCAACAATATCTCCGTCT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAGCTGTACGACATGGTaGTCCCCATTCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESCTTW*SPFSVM
Trigger: CATCACAGAGAATGGGGACCACCATGTCGTACAGCT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCAATCCGCACGATGGTaGGGTCTTCCACATACTGAA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPQSARW*GLPHTE
Trigger: TTCAGTATGTGGAAGACCCCACCATCGTGCGGATTG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCATATCTGCAGCTTTaGGCCGGTGGGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPYLQL*AGGSKA
Trigger: TGCCTTGCTCCCACCGGCCCAAAGCTGCAGATATGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACACCACGGAACCATCTaGCACCTGGTAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQHHGTI*HLVVGQ
Trigger: CTGGCCCACTACCAGGTGCCAGATGGTTCCGTGGTG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGGTCCTGGAGACGGTaGAGTTGTTCACTGCGTTAT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRSWRR*SCSLRY
Trigger: ATAACGCAGTGAACAACTCCACCGTCTCCAGGACCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTTGGTCCAATCGTGTTaGCAGAGCAACTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLVQSC*QSNWKR
Trigger: TCTCTTCCAGTTGCTCTGCCAACACGATTGGACCAA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACAGGGACTAGGCTGTTaGCCCCAGCCGTCTATGGAG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQQGLGC*PQPSME
Trigger: CTCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCAGATCTGACAAGCTaGAGGCTGAGGTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPDLTS*RLRLAG
Trigger: GCCAGCCAACCTCAGCCTCCAGCTTGTCAGATCTGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCACATGTACCCTTTCTaGCCTTCCAGGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSHMYPF*PSRSCD
Trigger: GTCACAGGACCTGGAAGGCCAGAAAGGGTACATGTG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAGCCCGCAAGCCACATaGACAGCCCCTGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSPQAT*TAPGCL
Trigger: CAAACATCCAGGGGCTGTCCATGTGGCTTGCGGGCT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGGCCTGTGGGACACTTaGGTTATCCACTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSGLWDT*VIHCSQ
Trigger: TTGGGAACAGTGGATAACCCAAGTGTCCCACAGGCC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTATGTACCTTGGCCTGTaGGACACTTGGGTTATCCAC +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPMYLGL*DTWVIH
Trigger: GTGGATAACCCAAGTGTCCCACAGGCCAAGGTACAT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATCTGTTGTGGTACCCTaGAGTTGCTGGTTGCTATGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESVVVP*SCWLLW
Trigger: CCATAGCAACCAGCAACTCCAGGGTACCACAACAGA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCACTTGGCTGCAGAAGTaGACAGATGAGCATAAGGTT +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGTWLQK*TDEHKV
Trigger: AACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGT...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGCCAGTTTCACATaGAACTCCTGGGACGTATTT +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGRASFT*NSWDVF
Trigger: AAATACGTCCCAGGAGTTCCATGTGAAACTGGCTCT...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp GGAGGTAGATGTGTCTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACATGTAGACATATGCGATaGCAGACGTCATGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: GGRCVSSVSIFQYPRLTTCRHMR*QTSCGP
Trigger: GGGACCGCATGACGTCTGTCATCGCATATGTCTACA...TGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAGACACATCTACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGATGATAATCTAGACTaGGGCACGGCTTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSDDNLD*GTAWCV
Trigger: GACACACCAAGCCGTGCCTCAGTCTAGATTATCATC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTTGGATGTATACACCTaGTCCTTGGTGGTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLDVYT*SLVVEP
Trigger: AGGCTCCACCACCAAGGAGCAGGTGTATACATCCAA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTCATGGGTGCAGACATaGCGGTATTTACACCAGTGG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSWVQT*RYLHQW
Trigger: CCACTGGTGTAAATACCGGCATGTCTGCACCCATGA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACATCCACTAAAGGGCTaGACTCCACGCCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKHPLKG*TPRQQP
Trigger: AGGTTGCTGGCGTGGAGTGCAGCCCTTTAGTGGATG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGTGATGTCTTCATCCTaGAAGATCATCCTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEVMSSS*KIILAP
Trigger: TGGGGCAAGGATGATCTTGCAGGATGAAGACATCAC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATCAGGGGCAGGCAATTaGTCTTCCAGGTATGGCGGA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSGAGN*SSRYGG
Trigger: TCCGCCATACCTGGAAGAGCAATTGCCTGCCCCTGA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCTGCTCCAGCCACATaGAGGAGGTGTAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPAPAT*RRCSLS
Trigger: AGAAAGGCTACACCTCCTGCATGTGGCTGGAGCAGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTAGTGACAAAGTCATCTaGATAGCAATGGCACCGGAT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLSDKVI*IAMAPD
Trigger: ATCCGGTGCCATTGCTATGCAGATGACTTTGTCACT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGGCACACATTTGCCTaGCTGGCTAAAATCGTGCAT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRHTFA*LAKIVH
Trigger: ATGCACGATTTTAGCCAGGCAGGCAAATGTGTGCCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGACCTGGTACTGCACTTaGCAAAACCTTTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMTWYCT*QNLWLF
Trigger: AAATAACCAAAGGTTTTGGCAAGTGCAGTACCAGGT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGGGCTGGCTTTGGGTaGAGGGATCATGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGAGFG*RDHAAI
Trigger: AATGGCAGCATGATCCCTGCACCCAAAGCCAGCCCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGCAGAAGCCAGACATaGAACGGGAGACACGGTACC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGRSQT*NGRHGT
Trigger: GGTACCGTGTCTCCCGTTGCATGTCTGGCTTCTGCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCATTTGGGAAGTCATTaGTTGTGGATCCTCGGATGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPHLGSH*LWILGW
Trigger: CCATCCGAGGATCCACAAGCAATGACTTCCCAAATG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAACATTTGGGAAGTCATTaGTTGTGGATCCTCGGATGG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEHLGSH*LWILGW
Trigger: CCATCCGAGGATCCACAAGCAATGACTTCCCAAATG...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACTTGACAGCTTCTCTTaGGGCGTCCAAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLDSFS*GVQGGR
Trigger: ACGCCCACCTTGGACGCCGCAAGAGAAGCTGTCAAG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAATGATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTGGAATTATGGAATTGTaGTGGATAGTGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: EMIGAHDTKCFHFLRHSPGIMEL*WIVAMQ
Trigger: CTGCATGGCCACTATCCAGCACAATTCCATAATTCC...AGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTATCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCCAGTTCCAGGGCATaGCTTTCATGGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSSSRA*LSWQRR
Trigger: CCGCCTCTGCCATGAAAGCCATGCCCTGGAACTGGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGACCTTCAGGTCGCTaGAGAGCTTGTAAATCCGAT +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRPSGR*RACKSD
Trigger: ATCGGATTTACAAGCTCTCCAGCGACCTGAAGGTCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGGTCAGTTTCCGGCTaGAGATGGTGGGAAAATACT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEWSVSG*RWWENT
Trigger: AGTATTTTCCCACCATCTCCAGCCGGAAACTGACCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATAGCCACGAACTCATCATaGAAGACGTACGCGAACATG +
Preference number: 4 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIATNSS*KTYANM
Trigger: CATGTTCGCGTACGTCTTCCATGATGAGTTCGTGGC...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTTCATTTTCCGCTTCTaGCCCTTGGAGAAGACGGTG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSFIFRF*PLEKTV
Trigger: CACCGTCTTCTCCAAGGGCCAGAAGCGGAAAATGAA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCTCATCTGAGGATGTaGTGTTGCAGACAATGTAGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPHLRM*CCRQCR
Trigger: CCTACATTGTCTGCAACACCACATCCTCAGATGAGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATGCTTGGCACGGATCTaGGGGTTCTGTATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKCLARI*GFCMRS
Trigger: GGACCTCATACAGAACCCCCAGATCCGTGCCAAGCA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATGGTCTCCGTGCTCGTaGTTCTTCACTAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKWSPCS*FFTRCH
Trigger: GTGGCACCTAGTGAAGAACCACGAGCACGGAGACCA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAATGTCCCCTGTCCCTaGCTCCTCATTCGTTATTTG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDENVPCP*LLIRYL
Trigger: CAAATAACGAATGAGGAGCCAGGGACAGGGGACATT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGTACCGGATGCTCCATaGACTTTGCTGGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSVPDAP*TLLEMV
Trigger: CACCATTTCCAGCAAAGTCCATGGAGCATCCGGTAC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCCAATTCCTTTCTCTaGGAGCCCGCAAGCCACATG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPNSFL*EPASHM
Trigger: CATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGTTGCATGGGGGAGGTaGAGATGCTGGGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQVAWGR*RCWAST
Trigger: TGTACTGGCCCAGCATCTCCACCTCCCCCATGCAAC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTCCTGTTTGGTGAAGTaGTCTCGGTTTCTTAAGCGT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSCLVK*SRFLKR
Trigger: ACGCTTAAGAAACCGAGACCACTTCACCAAACAGGA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCGTTGGTTTCCGAATaGAAACAAGATTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSLVSE*KQDSLR
Trigger: CCTCAAAGAATCTTGTTTCCATTCGGAAACCAACGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAAAACACAAAATCGTTaGTTTCCGAATGGAAACAAG +
Preference number: 4 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHKTQNR*FPNGNK
Trigger: CTTGTTTCCATTCGGAAACCAACGATTTTGTGTTTT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAGCCATTGTCTGTTGTaGTACCCTGGAGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSHCLL*YPGVAG
Trigger: ACCAGCAACTCCAGGGTACCACAACAGACAATGGCT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATAGCTATGATGTATGGCTaGGGTCACAGGGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIAMMYG*GHREVD
Trigger: ATCTACCTCCCTGTGACCCCAGCCATACATCATAGC...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCCGAGGTTTAGTGTGGTaGTTCTTAGCAACAGAACAA +
Preference number: 4 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGRGLVW*FLATEQ
Trigger: TTGTTCTGTTGCTAAGAACCACCACACTAAACCTCG...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGCTCTCCTCGGAATGTaGCAAATGACCGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKALLGM*QMTAAS
Trigger: AGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCTTGGAGAAGACGGTaGAGAGCAGGTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPWRRR*RAGHHL
Trigger: CAGATGATGACCTGCTCTTCACCGTCTTCTCCAAGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCACGGGCAGGTTGTTaGTCTCCATCCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPRAGC*SPSLHR
Trigger: CCTATGAAGGGATGGAGATCAACAACCTGCCCGTGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACATCTTCTCAGCCACTaGCTCAGTCCTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQHLLSH*LSPPEQ
Trigger: CTGCTCAGGAGGACTGAGTCAGTGGCTGAGAAGATG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCCCAGCACACTCCTTaGGGAACTTGTAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPQHTP*GTCRGG
Trigger: TCCTCCTCTACAAGTTCCTCAAGGAGTGTGCTGGGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAATAGGAGAAGATCTCTaGGAGTGCACTCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEIGEDL*ECTHGV
Trigger: AACACCATGAGTGCACTCTCAGAGATCTTCTCCTAT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACATTCTTGGACTAACTaGGGGTCAGTGGCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKHSWTN*GSVAWS
Trigger: GGACCAAGCCACTGACCCTCAGTTAGTCCAAGAATG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGACAGAGGCCTCTCTaGCATCTTCTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQRQRPL*HLLVSS
Trigger: GGAGCTGACCAGAAGATGTCAGAGAGGCCTCTGTCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTCTGCATTTCACGTTaGCCCTTGATGAAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLCISR*PLMKVD
Trigger: GTCAACCTTCATCAAGGGTCAACGTGAAATGCAGAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGTGTTGAAATGTCCTaGAGCTGCAGGATGAATGGA +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSVEMS*SCRMNG
Trigger: TCCATTCATCCTGCAGCTTCAGGACATTTCAACACT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCTCGGTTAAGTATTTaGCTTCACATTACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLARLSI*LHITVS
Trigger: GGACACAGTAATGTGAAGTCAAATACTTAACCGAGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTGGGAGGTTTGTCCTTaGCTGATAACAATACTGGCC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSWEVCP*LITILA
Trigger: GGCCAGTATTGTTATCAGTCAAGGACAAACCTCCCA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGCCTCCTTAAAGTTTaGGGAAAGCTGATAAGAGAT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESLLKV*GKLIRD
Trigger: ATCTCTTATCAGCTTTCCTCAAACTTTAAGGAGGCT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACAAGCCTACACAGCTCTaGAGTTTTTCTCAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHKPTQL*SFSQFD
Trigger: ATCAAACTGAGAAAAACTTCAGAGCTGTGTAGGCTT...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGGATCTTCTTCAGCTTaGCACTTTTGGTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSGSSSA*HFWCPQ
Trigger: TTGTGGGCACCAAAAGTGGCAAGCTGAAGAAGATCC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATTGGCCCTGTCCACCTaGACCGACACCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLALST*TDTFIS
Trigger: AGAGATGAAGGTGTCGGTGCAGGTGGACAGGGCCAA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACTGCAAGATCATCCTTaGCCCACTTCCTTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLQDHP*PTSLSP
Trigger: TGGCGACAAGGAAGTGGGGCAAGGATGATCTTGCAG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACTTAGGATGGGAGACTaGACCAGACAGCACCTAAGG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLRMGD*TRQHLR
Trigger: CCTTAGGTGCTGTCTGGTGCAGTCTCCCATCCTAAG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTTCTCCACCTGGTACTaGACTTGCCAAAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSFSTWY*TCQNLW
Trigger: CCAAAGGTTTTGGCAAGTGCAGTACCAGGTGGAGAA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCACCTCACTACCTCTaGCAATACAAACAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESPHYL*QYKQKV
Trigger: AACTTTCTGTTTGTATTGGCAGAGGTAGTGAGGTGA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAAGTCTACTTGCTTTTaGAATCCTGGCGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEKSTCF*NPGGGK
Trigger: TTTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGCTGGAAGAAGAGCTaGATAGACCAAGTCTACTTG +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDECWKKS*IDQVYL
Trigger: CAAGTAGACTTGGTCTATGCAGCTCTTCTTCCAGCA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATGGAGGCCTTGTTCCTaGTCAAAGCAGCCAACACAC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKWRPCS*SKQPTH
Trigger: GTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTCCA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAAATGATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTCTCTTTCAAAGTCCTTaGTTTACCCATCCCTATGCA +
Preference number: 4 (lower is better)
Translates to: EMIGAHDTKCFHFLRHSPLFQSP*FTHPYA
Trigger: TGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAG...AGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTATCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAGAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGAGACCTTCAGGTCGCTaGAGAGCTTGTAAATCCGAT +
Preference number: 4 (lower is better)
Translates to: ENYTVVYPPGTIRGLVWWRPSGR*RACKSD
Trigger: ATCGGATTTACAAGCTCTCCAGCGACCTGAAGGTCT...CCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAAAGCCTCACGAGCTTaGATGTATACACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSKASRA*MYTPAP
Trigger: AGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGAGCAGGTCATCATCTaGATGGACTCCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKEQVII*MDSKGP
Trigger: AGGACCCTTGGAGTCCATCCAGATGATGACCTGCTC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCCCGGAGGACAGGGTaGTCTTCAATTCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSRRTG*SSIPGN
Trigger: GTTCCCAGGAATTGAAGACCACCCTGTCCTCCGGGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATTCTGCTTCCCACACTaGTCATCGTGGTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKFCFPH*SSWSRG
Trigger: ACCTCTGGACCACGATGACCAGTGTGGGAAGCAGAA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAAGCAAGATGGGCTGTaGCTCTGGATACCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKKQDGL*LWIPGS
Trigger: TGAGCCAGGTATCCAGAGCCACAGCCCATCTTGCTT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTTTGATGGCTCAGTCTaGTACCATTTTCCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSFDGSV*YHFPWE
Trigger: CTCCCAGGGAAAATGGTACCAGACTGAGCCATCAAA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCAGAGACTTTTCCTGTaGGTAACTCCTGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSQRLFL*VTPASS
Trigger: GGAAGAAGCAGGAGTTACCCACAGGAAAAGTCTCTG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGACATCAAAGCGGGTaGGAATGGAATAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRHQSG*EWNKVR
Trigger: CCTCACTTTATTCCATTCCCACCCGCTTTGATGTCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATCTTCGTCCTGTGCCTaGATTGCGGCTGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSSSCA*IAADFC
Trigger: ACAGAAGTCAGCCGCAATCCAGGCACAGGACGAAGA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCCTACATGCTAAAGTaGGGAGGAGGGCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPYMLK*GGGQWH
Trigger: ATGCCACTGCCCTCCTCCCCACTTTAGCATGTAGGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACTGGAAGAGATGGGCTaGCCCCTACATGCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLEEMG*PLHAKV
Trigger: CACTTTAGCATGTAGGGGCCAGCCCATCTCTTCCAG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACTGGAAGGGGGTGACTaGAACAGAGATAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLEGGD*NRDNLP
Trigger: GGGCAGGTTATCTCTGTTCCAGTCACCCCCTTCCAG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GGAGGTAGATGTGTCTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACACCTAAGGACTTGGGGTaGCAGGACATGAGCTATGAT +
Preference number: 4 (lower is better)
Translates to: GGRCVSSVSIFQYPRLTTPKDLG*QDMSYD
Trigger: ATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGG...TGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAGACACATCTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
3UTR CAA 72 bp TGCTGCCATTGGAATGTACCTTGGCCTGTGGGACACTaGGGTTATCCACTGTTCCCAAATTTAAAACCATAC +
Preference number: 4 (lower is better)
Translates to: CCHWNVPWPVGH*GYPLFPNLKPY
Trigger: GTATGGTTTTAAATTTGGGAACAGTGGATAACCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp CTGATAACAATACTGGCCCTTTGCTCGGTTAAGTATTaGACTTCACATTACTGTGTCCCCTTGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LITILALCSVKY*TSHYCVPLVLG
Trigger: TCCCAGGACCAAGGGGACACAGTAATGTGAAGTCAAATACTTAACCGAGCAAAGGGCCAGTATTGTTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCTCTACATAGGAGTTaGAGGCTGTGTCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPLHRS*RLCPPC
Trigger: GCAAGGAGGACACAGCCTTCAACTCCTATGTAGAGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGTAGACATATGCGATaGCAGACGTCATGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQCRHMR*QTSCGP
Trigger: GGGACCGCATGACGTCTGTCATCGCATATGTCTACA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGAAGTAATAGAGCTGTaGGGACCGGGCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKEVIEL*GPGHEF
Trigger: GAATTCATGGCCCGGTCCTCACAGCTCTATTACTTC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTACTAGGATTCAGATaGAAAGGTCAGGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLLGFR*KGQEHL
Trigger: GAGATGCTCCTGACCTTTTCATCTGAATCCTAGTAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGCAAGGACAGCTTTTTaGCAATGTTGCTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: FPNERSGHLGFLSRACHPARTAF*QCCLSL
Trigger: CAAAGACAAGCAACATTGTCAAAAAGCTGTCCTTGC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAATAGCAGCAGCCATGTaGGATGCCACCCCTAGCATT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQIAAAM*DATPSI
Trigger: AATGCTAGGGGTGGCATCTCACATGGCTGCTGCTAT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGCCTCCTTAAAGTTTaGGGAAAGCTGATAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSLLKV*GKLIRD
Trigger: ATCTCTTATCAGCTTTCCTCAAACTTTAAGGAGGCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACACACTAAATAAGCCTGCAGGACATGAGCTATaGTGTATGGCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LICFHFPISKADNTLNKPAGHEL*CMAGVT
Trigger: TGTGACCCCAGCCATACATCATAGCTCATGTCCTGC...AGGCTTATTTAGTGTGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGGTTAAGAGCGCACTaGTGCAGGGGATGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQWLRAH*CRGCPS
Trigger: TGAAGGACATCCCCTGCAGCAGTGCGCTCTTAACCA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGGGGTTTGTGCACTTaGTTTTGGCACCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGGLCT*FWHQTA
Trigger: AGCTGTCTGGTGCCAAAAGCAAGTGCACAAACCCCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATTGAACTCATTCATGTaGATCCGGGACTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLNSFM*IRDCSA
Trigger: GGCTGAGCAGTCCCGGATGCACATGAATGAGTTCAA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGCCTGGCTAAAATCGTaGATCTGTAGATGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEAWLKS*ICRCKN
Trigger: GTTCTTACATCTACAGATGCACGATTTTAGCCAGGC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACTTAGGATGGGAGACTaGACCAGACAGCACCTAAGG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLRMGD*TRQHLR
Trigger: CCTTAGGTGCTGTCTGGTGCAGTCTCCCATCCTAAG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATGGGTGCAGGGATCATaGTGCCATTGGAATGTACCT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKWVQGS*CHWNVP
Trigger: AGGTACATTCCAATGGCAGCATGATCCCTGCACCCA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAAAGGTACAGAAGCTTaGCTTTACCAAGTTACAACT +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEKGTEA*LYQVTT
Trigger: AGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACACACTAAATAAGCCTGTTTCCGGCTGGAGATaGTGGGAAAATACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LICFHFPISKADNTLNKPVSGWR*WENTRA
Trigger: AGCCCGAGTATTTTCCCACCATCTCCAGCCGGAAAC...AGGCTTATTTAGTGTGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGCCACGAACTCATCATaGAAGACGTACGCGAACATG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKATNSS*KTYANM
Trigger: CATGTTCGCGTACGTCTTCCATGATGAGTTCGTGGC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGCGCTCACAGCCAATaGGCACCTCTACATAGGAGT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQCAHSQ*APLHRS
Trigger: ACTCCTATGTAGAGGTGCCCATTGGCTGTGAGCGCA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATGTAGAAGACAAAGCTaGTGCTGGCGAAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKCRRQS*CWRRSC
Trigger: GCATGACCTTCGCCAGCACCAGCTTTGTCTTCTACA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATTCTGCTTCCCACACTaGTCATCGTGGTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQFCFPH*SSWSRG
Trigger: ACCTCTGGACCACGATGACCAGTGTGGGAAGCAGAA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGGAGCATCTCCATGGTaGAATGTAATTGCTATTCTT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLGASPW*NVIAIL
Trigger: AAGAATAGCAATTACATTCCACCATGGAGATGCTCC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTATGATGTCTGATGTTTaGGGAGTGAAGGCAAGACTG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSMMSDV*GVKARL
Trigger: CAGTCTTGCCTTCACTCCCCAAACATCAGACATCAT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAATGTACCTTGGCCTGTaGGACACTTGGGTTATCCAC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKMYLGL*DTWVIH
Trigger: GTGGATAACCCAAGTGTCCCACAGGCCAAGGTACAT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGAGGTGACTCAGTCATaGAAAGACCCCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQEVTQS*KDPLKA
Trigger: GGCCTTCAAGGGGTCTTTCCATGACTGAGTCACCTC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAGACATCAAAGCGGGTaGGAATGGAATAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSRHQSG*EWNKVR
Trigger: CCTCACTTTATTCCATTCCCACCCGCTTTGATGTCT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACACACTAAATAAGCCTTACCCATGGGACGCTTaGGGCAGAGAAAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LICFHFPISKADNTLNKPYPWDA*GREKRP
Trigger: TGGTCTCTTTTCTCTGCCCCAAGCGTCCCATGGGTA...AGGCTTATTTAGTGTGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACACACTAAATAAGCCTTTTTGGGTGCTCTCCTaGACCAGATGCCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: LICFHFPISKADNTLNKPFWVLS*TRCQQS
Trigger: GCTCTGTTGGCATCTGGTCCAGGAGAGCACCCAAAA...AGGCTTATTTAGTGTGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp CGCTTGGGGCAGAGAAAAGAGACCAACTACCTAGCCAAGCTAAGCAGAGACACATTAAGGAAAGGAGACTaGACAACACCAATTAACTTT +
Preference number: 4 (lower is better)
Translates to: RLGQRKETNYLAKLSRDTLRKGD*TTPINF
Trigger: AAAGTTAATTGGTGTTGTCCAGTCTCCTTTCCTTAA...TGTGTCTCTGCTTAGCTTGGCTAGGTAGTTGGTCTCTTTTCTCTGCCCCAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp GAAATGATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTATACGAGGTTTAGTGTaGTGGTTCTTAGCAACAGAA +
Preference number: 4 (lower is better)
Translates to: EMIGAHDTKCFHFLRHSPIRGLV*WFLATE
Trigger: TTCTGTTGCTAAGAACCACCACACTAAACCTCGTAT...AGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTATCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGACAAGAAATCCTTTTaGGCTTTCCGCCTACACCTG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKDKKSF*AFRLHL
Trigger: CAGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTGGGAGGGAATAAAATaGTCAAGGATAGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLWEGIK*SRIEKS
Trigger: TGACTTTTCTATCCTTGATCATTTTATTCCCTCCCA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCTTCTGTCTGCTCATaGCTCAACATAATGGTGACC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPSVCS*LNIMVT
Trigger: GGTCACCATTATGTTGAGTCATGAGCAGACAGAAGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCCTTCTCTAGCATTTaGAGCTCAACTCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPFSSI*SSTLGP
Trigger: AGGACCCAGAGTTGAGCTTCAAATGCTAGAGAAGGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATAGCCTTCATACACTCTTaGCTACACTTTATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIAFIHS*LHFISQ
Trigger: CTGGGAAATAAAGTGTAGTCAAGAGTGTATGAAGGC...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGCTTGTCATCCAGGTTaGTGTAGGAGACGATCACTC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQACHPG*CRRRSL
Trigger: GAGTGATCGTCTCCTACAGCAACCTGGATGACAAGC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAAGAGATAACTATATTCCGATGGGAGAATCAGTTAGTTTCACTGACATATACAAGGCTGTGTCCTCCTTaGAAAGCCTCACGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QEITIFRWENQLVSLTYTRLCPP*KASRAW
Trigger: CCAAGCTCGTGAGGCTTTGCAAGGAGGACACAGCCT...TGTATATGTCAGTGAAACTAACTGATTCTCCCATCGGAATATAGTTATCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAATGCGGTCATTTATCTaGTTCAAGATGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEMRSFI*FKMKMH
Trigger: GTGCATCTTCATCTTGAAGCAGATAAATGACCGCAT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATCCTCATTCGTTATTTaGACCCTGCTGCTGACATGC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSSFVI*TLLLTC
Trigger: GCATGTCAGCAGCAGGGTGCAAATAACGAATGAGGA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGAGGGTGGAGATAGATaGTTTCTCTTGACAGCACTC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKEGGDR*FLLTAL
Trigger: GAGTGCTGTCAAGAGAAAGCATCTATCTCCACCCTC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAGGCACACATTTGCCTaGCTGGCTAAAATCGTGCAT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKRHTFA*LAKIVH
Trigger: ATGCACGATTTTAGCCAGGCAGGCAAATGTGTGCCT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTTCTTCCTCTTCCAATaGATTGTTTCCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLFFLFQ*IVSHFP
Trigger: AGGAAAATGGGAAACAATGCATTGGAAGAGGAAGAA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCAACCCTTTATATGTaGAAAAATATTGTAGTGACC +
Preference number: 4 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPTLYM*KNIVVT
Trigger: GGTCACTACAATATTTTTGCACATATAAAGGGTTGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGTGCAGGGATCATGCTaGCATTGGAATGTACCTTGG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQVQGSC*HWNVPW
Trigger: CCAAGGTACATTCCAATGGCAGCATGATCCCTGCAC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCTGGAGTTGCTGGTTaGTATGGTAACTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPGVAG*YGNSAG
Trigger: TCCTGCTGAGTTACCATAGCAACCAGCAACTCCAGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp GAGAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGCACAAGAGTCAAACATaGCTACACTCCATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: ENYTVVYPPGTIRGLVWWHKSQT*LHSIVQ
Trigger: TTGGACAATGGAGTGTAGGCATGTTTGACTCTTGTG...CCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACACACTAAATAAGCCTGAGACACAGAGGGGTTaGCTGCTCTCACTAAATCTC +
Preference number: 4 (lower is better)
Translates to: LICFHFPISKADNTLNKPETQRG*LLSLNL
Trigger: GAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTCTC...AGGCTTATTTAGTGTGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTCATCTGTTTCCATTTTCCAATATCCAAGGCTGACAACACACTAAATAAGCCTCTTTACCCATCCCTATaGAGGTGCACATGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LICFHFPISKADNTLNKPLYPSL*RCTWPV
Trigger: AACAGGCCATGTGCACCTGCATAGGGATGGGTAAAG...AGGCTTATTTAGTGTGTTGTCAGCCTTGGATATTGGAAAATGGAAACAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp GACTACACTTTATTTCCCAGTAAGCTAGTAGAAATGATAGGAGCACATGACACCACAGCCATGCTTCAATaGACACAGAGCCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: DYTLFPSKLVEMIGAHDTTAMLQ*TQSQFH
Trigger: GTGAAACTGGCTCTGTGTGCATTGAAGCATGGCTGT...GGTGTCATGTGCTCCTATCATTTCTACTAGCTTACTGGGAAATAAAGTGTAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATTCATTTTCCGCTTCTaGCCCTTGGAGAAGACGGTG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQFIFRF*PLEKTV
Trigger: CACCGTCTTCTCCAAGGGCCAGAAGCGGAAAATGAA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGTAGAAGACAAAGCTaGTGCTGGCGAAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQCRRQS*CWRRSC
Trigger: GCATGACCTTCGCCAGCACCAGCTTTGTCTTCTACA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGCAGACAATGTAGGATaGAGATCGCCTGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQADNVG*RSPVEE
Trigger: CTCTTCCACAGGCGATCTCCATCCTACATTGTCTGC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGACAATGCTCCATTCTaGCTCAATCCGCACGATGGT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQDNAPF*LNPHDG
Trigger: ACCATCGTGCGGATTGAGCCAGAATGGAGCATTGTC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGGAACAGCACCCGCATaGTGTAAGTTCTATAGTCCA +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKGTAPA*CKFYSP
Trigger: TGGACTATAGAACTTACACCATGCGGGTGCTGTTCC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGTACCGGATGCTCCATaGACTTTGCTGGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQVPDAP*TLLEMV
Trigger: CACCATTTCCAGCAAAGTCCATGGAGCATCCGGTAC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCCACAGGACAAAGTTaGCCCAATTCCTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPTGQS*PNSFLW
Trigger: CCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCCTGGGAACAGTCCTaGACAGTCTGCCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSWEQS*TVCLKL
Trigger: AAGTTTGAGGCAGACTGTCCAGGACTGTTCCCAGGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCTGTTGTGGTACCCTaGAGTTGCTGGTTGCTATGG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSVVVP*SCWLLW
Trigger: CCATAGCAACCAGCAACTCCAGGGTACCACAACAGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGCAGCACGTTGTACTaGGAGACGGAGATATTGTTG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSSTLY*ETEILL
Trigger: CAACAATATCTCCGTCTCTCAGTACAACGTGCTGCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATTCATATTTACTTGCTaGGGTCCTGGAGACGGTGGA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQFIFTC*GPGDGG
Trigger: TCCACCGTCTCCAGGACCTCAGCAAGTAAATATGAA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACATCTTCCCTATGTCTaGGTAATACCTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQHLPYV*VIPLHP
Trigger: TGGGTGGAGAGGTATTACTCAGACATAGGGAAGATG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACTCATTCTGAGTGGGTaGCAAGGAATGATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLILSG*QGMMSD
Trigger: ATCAGACATCATTCCTTGTCACCCACTCAGAATGAG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp GAGAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGCCTGGGACGTATTTCTaGACAACTGTTTATAATGCT +
Preference number: 4 (lower is better)
Translates to: ENYTVVYPPGTIRGLVWWPGTYF*TTVYNA
Trigger: AGCATTATAAACAGTTGTTCAGAAATACGTCCCAGG...CCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGTGATGTCTTCATCCTaGAAGATCATCCTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQVMSSS*KIILAP
Trigger: TGGGGCAAGGATGATCTTGCAGGATGAAGACATCAC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATTCTTCCTCTTCCAATaGATTGTTTCCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEFFLFQ*IVSHFP
Trigger: AGGAAAATGGGAAACAATGCATTGGAAGAGGAAGAA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCTTAGTGGCACTATTTaGAGCTACCAAGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSLSGTI*SYQEMS
Trigger: TGACATTTCTTGGTAGCTGCAAATAGTGCCACTAAG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAAAGGTACAGAAGCTTaGCTTTACCAAGTTACAACT +
Preference number: 4 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEKGTEA*LYQVTT
Trigger: AGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp TCAACTCTTTCAAAGTCCTTGCTTTACCCATCCCTATGCAGGTGCACATGGCCTGCTAATTTTACATCTTaGCTTCATACACTCTTGACT +
Preference number: 4 (lower is better)
Translates to: STLSKSLLYPSLCRCTWPANFTS*LHTLLT
Trigger: AGTCAAGAGTGTATGAAGGCAAGATGTAAAATTAGC...AGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGACCTTCAGGTCGCTaGAGAGCTTGTAAATCCGAT +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQRPSGR*RACKSD
Trigger: ATCGGATTTACAAGCTCTCCAGCGACCTGAAGGTCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAAGAGATAACTATATTCCGATGGGAGAATCAGTTAGTTTCACTGACATATACATGCGCTCACAGCCAATaGGCACCTCTACATAGGAGT +
Preference number: 4 (lower is better)
Translates to: QEITIFRWENQLVSLTYTCAHSQ*APLHRS
Trigger: ACTCCTATGTAGAGGTGCCCATTGGCTGTGAGCGCA...TGTATATGTCAGTGAAACTAACTGATTCTCCCATCGGAATATAGTTATCTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGAATTTGAGGGTAAATaGAAAACAAATTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLEFEGK*KTNSAS
Trigger: GGAAGCAGAATTTGTTTTCCATTTACCCTCAAATTC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAATGATGTCTGATGTTTaGGGAGTGAAGGCAAGACTG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKMMSDV*GVKARL
Trigger: CAGTCTTGCCTTCACTCCCCAAACATCAGACATCAT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAATTACTGTGTCCCCTTaGTCCTGGGAAAGAAGACAG +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQITVSP*SWERRQ
Trigger: CTGTCTTCTTTCCCAGGACCAAGGGGACACAGTAAT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATCCTGTTTGGTGAAGTaGTCTCGGTTTCTTAAGCGT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSCLVK*SRFLKR
Trigger: ACGCTTAAGAAACCGAGACCACTTCACCAAACAGGA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTCGTTGGTTTCCGAATaGAAACAAGATTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSLVSE*KQDSLR
Trigger: CCTCAAAGAATCTTGTTTCCATTCGGAAACCAACGA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp GAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTTTCACATGGAACTCCTaGGACGTATTTCTGAACAAC +
Preference number: 4 (lower is better)
Translates to: ELHCCVSSRNYTRFSVVVFTWNS*DVFLNN
Trigger: GTTGTTCAGAAATACGTCCCAGGAGTTCCATGTGAA...AACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTATGATGAGAGACAGCTaGGATGTTGATGAAATCATT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSMMRDS*DVDEII
Trigger: AATGATTTCATCAACATCTCAGCTGTCTCTCATCAT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGGATTACTTTCCAAATaGGAGGAGTGGTCATTTAGG +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKGLLSK*EEWSFR
Trigger: CCTAAATGACCACTCCTCTCATTTGGAAAGTAATCC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGGAAACAAGATTCTTTaGGGTAAGCTAGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSGNKIL*GKLAFH
Trigger: ATGAAAAGCTAGCTTACCTCAAAGAATCTTGTTTCC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGCCTGGCTAAAATCGTaGATCTGTAGATGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKAWLKS*ICRCKN
Trigger: GTTCTTACATCTACAGATGCACGATTTTAGCCAGGC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CAAGAGATAACTATATTCCGATGGGAGAATCAGTTAGTTTCACTGACATATACACCATGCAGGAGACACTaGTCACGCTTTGTTGTAACC +
Preference number: 4 (lower is better)
Translates to: QEITIFRWENQLVSLTYTPCRRH*SRFVVT
Trigger: GGTTACAACAAAGCGTGAGCAGTGTCTCCTGCATGG...TGTATATGTCAGTGAAACTAACTGATTCTCCCATCGGAATATAGTTATCTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACTCCATGGACTTTGCTaGAAATGGTGTGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLHGLC*KWCGFF
Trigger: GAAGAAACCACACCATTTCCAGCAAAGTCCATGGAG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp CAAGAGATAACTATATTCCGATGGGAGAATCAGTTAGTTTCACTGACATATACATCCCCACCGGCTCTATaGGGGAATTATGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: QEITIFRWENQLVSLTYTSPPAL*GNYGIV
Trigger: CACAATTCCATAATTCCCCCATAGAGCCGGTGGGGA...TGTATATGTCAGTGAAACTAACTGATTCTCCCATCGGAATATAGTTATCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR TCA 90 bp CAAGAGATAACTATATTCCGATGGGAGAATCAGTTAGTTTCACTGACATATACAGAGCTTTTGCACATATaGTCAGCTCATCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: QEITIFRWENQLVSLTYTELLHI*SAHQAL
Trigger: CAGTGCCTGATGAGCTGATCATATGTGCAAAAGCTC...TGTATATGTCAGTGAAACTAACTGATTCTCCCATCGGAATATAGTTATCTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAATGCGGTCATTTATCTaGTTCAAGATGAAGATGCAC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKMRSFI*FKMKMH
Trigger: GTGCATCTTCATCTTGAAGCAGATAAATGACCGCAT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAATGGAAAACAAATTCTaGTTCCAGGGTAGATGCAAC +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKMENKF*FQGRCN
Trigger: GTTGCATCTACCCTGGAAGCAGAATTTGTTTTCCAT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCTCCCCATAGCCTCTaGTTACCTAGTATCAATTTC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSPHSL*LPSINF
Trigger: GAAATTGATACTAGGTAAGCAGAGGCTATGGGGAGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAACCTGGTACTGCACTTaGCAAAACCTTTGGTTATTT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKTWYCT*QNLWLF
Trigger: AAATAACCAAAGGTTTTGGCAAGTGCAGTACCAGGT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp TGTTTGGTGAAGTGGTCTCGGTTTCTTAAGCGTCCTTaGGGTTGCTCTTTAACTGTATCCTCTGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: CLVKWSRFLKRP*GCSLTVSSVLN
Trigger: ATTTAAAACAGAGGATACAGTTAAAGAGCAACCCAAAGGACGCTTAAGAAACCGAGACCACTTCACCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR TCA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGGAAACAAGATTCTTTaGGGTAAGCTAGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LFPFLPLCYISATRIQMKGNKIL*GKLAFH
Trigger: ATGAAAAGCTAGCTTACCTCAAAGAATCTTGTTTCC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR GCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACCAACCCTTTATATGTaGAAAAATATTGTAGTGACC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQPTLYM*KNIVVT
Trigger: GGTCACTACAATATTTTTGCACATATAAAGGGTTGG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CCA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGAATTTGAGGGTAAATaGAAAACAAATTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQEFEGK*KTNSAS
Trigger: GGAAGCAGAATTTGTTTTCCATTTACCCTCAAATTC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
3UTR CAA 72 bp CTCATCCACATACATTTGAGGCTCATTTTAACACTGTaGTCTAAAGATATGCTTTGCTTTGTTCTAACAAAG +
Preference number: 4 (lower is better)
Translates to: LIHIHLRLILTL*SKDMLCFVLTK
Trigger: CTTTGTTAGAACAAAGCAAAGCATATCTTTAGACAACAGTGTTAAAATGAGCCTCAAATGTATGTGGATGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp TCCTTGATGCCAAGCGGGCACAGCGGCGTCACTCCGCGCCGCCCATaGTCGCCCGGTCGGGCCGCTGCCCGGGCGCGGCGAGTGCGCGGG +
Preference number: 5 (lower is better)
Translates to: SLMPSGHSGVTPRRP*SPGRAAARARRVRG
Trigger: CCCGCGCACTCGCCGCGCCCGGGCAGCGGCCCGACCGGGCGAGCATGGGCGGCGCGGAGTGACGCCGCTGTGCCCGCTTGGCATCAAGGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS TCA 90 bp CCCCTGGACGCGCCGCGTTTCCCTCCTTCAGCGGGAGCGCCGCATTaGCACTGCAGATGGAGCCTATGCCGCTGCCTCTCGCCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PLDAPRFPPSAGAPH*HCRWSLCRCLSPSS
Trigger: AGAGGAGGGCGAGAGGCAGCGGCATAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCTGAAGGAGGGAAACGCGGCGCGTCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACGGCAGCCCCCACCCTaGCCGAGACACTCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRQPPP*PRHSPG
Trigger: GCCCGGCGAGTGTCTCGGCAAGGGTGGGGGCTGCCG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS CCA 90 bp CCCTCGGCGGGCTCTCCTCGGAATGTGACAAATGACCGCTGCTTCTaGGACAGCGGGGCTGGCTGCCGGGTGAGCAAAGTGGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PSAGSPRNVTNDRCF*DSGAGCRVSKVEEP
Trigger: GGGCTCCTCCACTTTGCTCACCCGGCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGCCCGCCGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp TCCCGGAGGACTGGGCCGGGGTCCACCACCTGCACCGTCTCATACTaGAGGGCGTTGCCCCTGGGTCCATCCACCCGGATCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SRRTGPGSTTCTVSY*RALPLGPSTRIFFS
Trigger: GCTGAAGAAGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGGTGGACCCCGGCCCAGTCCTCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp CTACTGGACGCGCCGCGTTTCCCTCCTTCAGCGGGAGCGCCGCATTaGCACTGCAGATGGAGCCTATGCCGCTGCCTCTCGCCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LLDAPRFPPSAGAPH*HCRWSLCRCLSPSS
Trigger: AGAGGAGGGCGAGAGGCAGCGGCATAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCTGAAGGAGGGAAACGCGGCGCGTCCAGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321063.8
CDS CCA 90 bp CGGGGGTTTGTGCACTTGCTTTTGGCACCAGACAGCTCCAGCCACTaGCTCTCCTGGGCAGGGCAGTGCTGGCGCAGGGTGCACTGGCCT +
Preference number: 5 (lower is better)
Translates to: RGFVHLLLAPDSSSH*LSWAGQCWRRVHWP
Trigger: AGGCCAGTGCACCCTGCGCCAGCACTGCCCTGCCCAGGAGAGCCAGTGGCTGGAGCTGTCTGGTGCCAAAAGCAAGTGCACAAACCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp GTTGTCCAGGATGAAGCCAAACTCCTCGGGCCTCTCGGTCAGGTCTaGCTGGTGGTCAGGACCCAGAGCGAGGGCGGGCGCCTGACAGGT +
Preference number: 5 (lower is better)
Translates to: VVQDEAKLLGPLGQV*LVVRTQSEGGRLTG
Trigger: ACCTGTCAGGCGCCCGCCCTCGCTCTGGGTCCTGACCACCAGTCAGACCTGACCGAGAGGCCCGAGGAGTTTGGCTTCATCCTGGACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp GATGGACCGTCAGCCGGACACACTGCTTCATCTCCGAGGCAAACCTaGGGGGCTCCTTGGACCGCTCACACCGCTCCTTCCGGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: DGPSAGHTASSPRQT*GAPWTAHTAPSGCK
Trigger: CTTGCACCCGGAAGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGATGAAGCAGTGTGTCCGGCTGACGGTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAAACCTGCGGGGCTCCTaGGACCGCTCACACCGCTCC +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGNLRGS*DRSHRS
Trigger: GGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp CTGGGCCGGGGTCCACCACCTGCACCGTCTCATACTGGAGGGCGTTaGCCCTGGGTCCATCCACCCGGATCTTCTTCAGCTTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: LGRGPPPAPSHTGGR*PWVHPPGSSSACHF
Trigger: AAAGTGGCAAGCTGAAGAAGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGGTGGACCCCGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp GGAGGTGGGAGAGAAGGCAGGTCCAGTTCCAGGGCATGGCTTTCATaGCAGAGGCGGGTCCCAGTGGCACAGCAGCACTCAGGCACAGTC +
Preference number: 5 (lower is better)
Translates to: GGGREGRSSSRAWLS*QRRVPVAQQHSGTV
Trigger: GACTGTGCCTGAGTGCTGCTGTGCCACTGGGACCCGCCTCTGCCATGAAAGCCATGCCCTGGAACTGGACCTGCCTTCTCTCCCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp GCCGGACACACTGCTTCATCTCCGAGGCAAACCTGCGGGGCTCCTTaGACCGCTCACACCGCTCCTTCCGGGTGCAAGTGTTGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: AGHTASSPRQTCGAP*TAHTAPSGCKCCAA
Trigger: TGCTGCACAACACTTGCACCCGGAAGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGATGAAGCAGTGTGTCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGCCAGGAAGGCAGCTTaGGGTGGGGTAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTARKAA*GGVGWG
Trigger: GCCCCATCCTACCCCACCCAAAGCTGCCTTCCTGGC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGCCAGGAAGGCAGCTTaGGGTGGGGTAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGARKAA*GGVGWG
Trigger: GCCCCATCCTACCCCACCCAAAGCTGCCTTCCTGGC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGGGACCCATAGGGCCTaGGCTAGACGAGGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGGTHRA*ARRGSS
Trigger: GGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp CAGGTGATTGAAACCCTCGGCGGGCTCTCCTCGGAATGTGACAAATaGCCGCTGCTTCTGGGACAGCGGGGCTGGCTGCCGGGTGAGCAA +
Preference number: 5 (lower is better)
Translates to: QVIETLGGLSSECDK*PLLLGQRGWLPGEQ
Trigger: TTGCTCACCCGGCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGCCCGCCGAGGGTTTCAATCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS TCA 90 bp CAAACATCACCACCACGTTGCTTCCGGCATTCAGGTTGGTGCCTGTaGTGGTCACTTGGGTCCCTCCGGACATGGGCCCCCGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QTSPPRCFRHSGWCL*WSLGSLRTWAPGWA
Trigger: AGCCCAGCCGGGGGCCCATGTCCGGAGGGACCCAAGTGACCATCACAGGCACCAACCTGAATGCCGGAAGCAACGTGGTGGTGATGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp TTGAAACCCTCGGCGGGCTCTCCTCGGAATGTGACAAATGACCGCTaGTTCTGGGACAGCGGGGCTGGCTGCCGGGTGAGCAAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: LKPSAGSPRNVTNDR*FWDSGAGCRVSKVE
Trigger: CTCCACTTTGCTCACCCGGCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGCCCGCCGAGGGTTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp GCCGACACACAGCCACGCAGATCTCCACGAAGCCTGCATGCTGGCTaGGCTTGGCCTCCCCCATCTCACACACGATCTGTTCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ADTQPRRSPRSLHAG*AWPPPSHTRSVLQG
Trigger: TCCCTGCAGAACAGATCGTGTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATCTGCGTGGCTGTGTGTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp ACCACGTTGCTTCCGGCATTCAGGTTGGTGCCTGTGATGGTCACTTaGGTCCCTCCGGACATGGGCCCCCGGCTGGGCTTCAGATCTGAG +
Preference number: 5 (lower is better)
Translates to: TTLLPAFRLVPVMVT*VPPDMGPRLGFRSE
Trigger: CTCAGATCTGAAGCCCAGCCGGGGGCCCATGTCCGGAGGGACCCAAGTGACCATCACAGGCACCAACCTGAATGCCGGAAGCAACGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGCTGGGGGAGGTTCTaGGCCTTCAGCGTGATAGGC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGWGRF*AFSVIG
Trigger: GCCTATCACGCTGAAGGCCAAGAACCTCCCCCAGCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGCATGCTGGCTGGGCTaGGCCTCCCCCATCTCACAC +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLACWLG*ASPISH
Trigger: GTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGGTCCTGGTGGATCTaGGCCCTGTCCACCTGCACC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTRSWWI*ALSTCT
Trigger: GGTGCAGGTGGACAGGGCCAAGATCCACCAGGACCT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGCCTGCCGATGAGGTaGGGGGACTCGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLCLPMR*GDSQSS
Trigger: GCTGCTCTGCGAGTCCCCCAACCTCATCGGCAGGCA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGGACCTCGGGGCTGTaGGCATTGTCTGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGTSGL*ALSGLT
Trigger: TGTCAGCCCAGACAATGCCAACAGCCCCGAGGTCCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACAGGGCCTGGAGGCCTaGTTCCTGCTCAAAGCAGCC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTQGLEA*FLLKAA
Trigger: GGCTGCTTTGAGCAGGAACAAGGCCTCCAGGCCCTG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp TCCGGGGCACCTCCTTGGCTGCAGGGGAGTAGCACTGGATCTGATTaGCCACGACCAGCCCATCCATCTCTGACAGGTCCTCAAAGGTGC +
Preference number: 5 (lower is better)
Translates to: SGAPPWLQGSSTGSD*PRPAHPSLTGPQRC
Trigger: GCACCTTTGAGGACCTGTCAGAGATGGATGGGCTGGTCGTGGGCAATCAGATCCAGTGCTACTCCCCTGCAGCCAAGGAGGTGCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp TGCCGGGTGAGCAAAGTGGAGGAGCCCATGCCCACCATGAGGAGGTaGGAGAGAAGGCAGGTCCAGTTCCAGGGCATGGCTTTCATGGCA +
Preference number: 5 (lower is better)
Translates to: CRVSKVEEPMPTMRR*ERRQVQFQGMAFMA
Trigger: TGCCATGAAAGCCATGCCCTGGAACTGGACCTGCCTTCTCTCCCACCTCCTCATGGTGGGCATGGGCTCCTCCACTTTGCTCACCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp TCAGGGGCTCATTGCAGGTCTGGACGATGCGGGGTGGGTAACACTTaGGGTTGTCCTCGTCCGGCCCTGTCTCATGCGTCACCAAGACCT +
Preference number: 5 (lower is better)
Translates to: SGAHCRSGRCGVGNT*GCPRPALSHASPRP
Trigger: AGGTCTTGGTGACGCATGAGACAGGGCCGGACGAGGACAACCCCAAGTGTTACCCACCCCGCATCGTCCAGACCTGCAATGAGCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp ATCACTTTGTGCCTGCCGATGAGGTTGGGGGACTCGCAGAGCAGCTaGACATCTGACACGGTCACGGTGCACGGCTTCTCCCCAACCAGC +
Preference number: 5 (lower is better)
Translates to: ITLCLPMRLGDSQSS*TSDTVTVHGFSPTS
Trigger: GCTGGTTGGGGAGAAGCCGTGCACCGTGACCGTGTCAGATGTCCAGCTGCTCTGCGAGTCCCCCAACCTCATCGGCAGGCACAAAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGTGGTCAGGGGCTCATaGCAGGTCTGGACGATGCGG +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLVVRGS*QVWTMR
Trigger: CCGCATCGTCCAGACCTGCAATGAGCCCCTGACCAC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGGCTGGGGGAGGTTCTaGGCCTTCAGCGTGATAGGC +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLGWGRF*AFSVIG
Trigger: GCCTATCACGCTGAAGGCCAAGAACCTCCCCCAGCC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAACAGGGACTAGGCTGTaGGCCCCAGCCGTCTATGGA +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGTGTRL*APAVYG
Trigger: TCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTGT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGTACCAGGGACCTGGTaGCATGGGGGAGGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTVPGTW*HGGGGD
Trigger: ATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTAC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAGGGCTTCTCTGGGCCTaGTGCCTGCAGAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLGLLWA*CLQSTF
Trigger: GAAGGTGCTCTGCAGGCACAAGGCCCAGAGAAGCCC...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp CATGAATTCAGGCCGACACACAGCCACGCAGATCTCCACGAAGCCTaGATGCTGGCTGGGCTTGGCCTCCCCCATCTCACACACGATCTG +
Preference number: 5 (lower is better)
Translates to: HEFRPTHSHADLHEA*MLAGLGLPHLTHDL
Trigger: CAGATCGTGTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATCTGCGTGGCTGTGTGTCGGCCTGAATTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp GCGGAGGGCGCCGAATCAGAGCCTGCGGGGCTTGACAGCTTCTCTTaGGGCGTCCAAGGTGGGCGTAATGTCCAACAAAAAGGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: AEGAESEPAGLDSFS*GVQGGRNVQQKGRK
Trigger: TTTCCGACCTTTTTGTTGGACATTACGCCCACCTTGGACGCCGCAAGAGAAGCTGTCAAGCCCCGCAGGCTCTGATTCGGCGCCCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS CCA 90 bp TTCTGGCCCTTGGAGAAGACGGTGAAGAGCAGGTCATCATCTGGATaGACTCCAAGGGTCCTGCCAAGCACGGCCCCCGCTTTGGACAGG +
Preference number: 5 (lower is better)
Translates to: FWPLEKTVKSRSSSG*TPRVLPSTAPALDR
Trigger: CCTGTCCAAAGCGGGGGCCGTGCTTGGCAGGACCCTTGGAGTCCATCCAGATGATGACCTGCTCTTCACCGTCTTCTCCAAGGGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCCGCCTCAGAGTTCTaGGTCAGTTTCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSASEF*VSFRLE
Trigger: CTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGAGACGGAGATATTGTaGGGATGGACCGTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGETEIL*GWTVSR
Trigger: CCGGCTGACGGTCCATCCCAACAATATCTCCGTCTC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCGGGGCTGTTGGCATaGTCTGGGCTGACACAGCTC +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSGLLA*SGLTQL
Trigger: GAGCTGTGTCAGCCCAGACAATGCCAACAGCCCCGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCTGCAAGATCATCCTaGCCCCACTTCCTTGTCGCC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPARSS*PHFLVA
Trigger: GGCGACAAGGAAGTGGGGCAAGGATGATCTTGCAGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACTCAGGGGCAGGCAATaGCTCTTCCAGGTATGGCGG +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLLRGRQ*LFQVWR
Trigger: CCGCCATACCTGGAAGAGCAATTGCCTGCCCCTGAG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAGACTGAGGCACGGCTaGGTGTGTCCCCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHRLRHG*VCPPPG
Trigger: CCCTGGAGGGGGACACACCAAGCCGTGCCTCAGTCT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACGGCTCGCTGAGCCATaGTCTGTTGTGGTACCCTGG +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLRLAEP*SVVVPW
Trigger: CCAGGGTACCACAACAGACAATGGCTCAGCGAGCCG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp CCACGACCAGCCCATCCATCTCTGACAGGTCCTCAAAGGTGCAGTTaGCGCCAGCTGACAGCTCCGGGACATTGTACGTCTCCAGGACCA +
Preference number: 5 (lower is better)
Translates to: PRPAHPSLTGPQRCS*RQLTAPGHCTSPGP
Trigger: TGGTCCTGGAGACGTACAATGTCCCGGAGCTGTCAGCTGGCGTCAACTGCACCTTTGAGGACCTGTCAGAGATGGATGGGCTGGTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp AATTCAGGCCGACACACAGCCACGCAGATCTCCACGAAGCCTGCATaGTGGCTGGGCTTGGCCTCCCCCATCTCACACACGATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: NSGRHTATQISTKPA*WLGLASPISHTICS
Trigger: AGAACAGATCGTGTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATCTGCGTGGCTGTGTGTCGGCCTGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp TCTAGACTGAGGCACGGCTTGGTGTGTCCCCCTCCAGGGCGGCCCTaGAAGGACGGTTCTCAGCTGTCTAAGCTCATGAGGGTTATGACT +
Preference number: 5 (lower is better)
Translates to: SRLRHGLVCPPPGRP*KDGSQLSKLMRVMT
Trigger: AGTCATAACCCTCATGAGCTTAGACAGCTGAGAACCGTCCTTCCAGGGCCGCCCTGGAGGGGGACACACCAAGCCGTGCCTCAGTCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATCCGCCTCAGAGTTCTaGGTCAGTTTCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLSASEF*VSFRLE
Trigger: CTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGGA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAAGTCTGGGTCAGCCTaGAGGCACAGCCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHKSGSA*RHSPQL
Trigger: GAGCTGCGGGCTGTGCCTCAAGGCTGACCCAGACTT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTAACACGGGCCATCACTTaGTGCCTGCCGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLTRAIT*CLPMRL
Trigger: CAACCTCATCGGCAGGCACAAAGTGATGGCCCGTGT...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACATCTTTCCCTCACTGCTaGGCTGTCTGTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSFPHC*AVCEVG
Trigger: TCCCACCTCACAGACAGCCAAGCAGTGAGGGAAAGA...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAACCATGAGGAGAGGTTaGCAGAGTGTCCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGTMRRG*QSVPAS
Trigger: TGAGGCTGGGACACTCTGCAAACCTCTCCTCATGGT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTCACTGGCCAGGCGACTaGGCTGCAGAAGTGGACAGA +
Preference number: 5 (lower is better)
Translates to: CCSTVGSILSALCMHTHLHWPGD*AAEVDR
Trigger: TCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAGTG...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS TCA 90 bp GGATGTAACCATCCACTAAAGGGCTGCACTCCACGCCAGCAACCTTaGCATGGGAGGCGATGTCGCGAAATTCCAGGCCCAGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GCNHPLKGCTPRQQP*HGRRCREIPGPGSP
Trigger: GGGAGAACCTGGGCCTGGAATTTCGCGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGGAGTGCAGCCCTTTAGTGGATGGTTACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp CTCCATTCTGGCTCAATCCGCACGATGGTGGGGTCTTCCACATACTaGAAGACCAGGTCCTGGTGGATCTTGGCCCTGTCCACCTGCACC +
Preference number: 5 (lower is better)
Translates to: LHSGSIRTMVGSSTY*KTRSWWILALSTCT
Trigger: GGTGCAGGTGGACAGGGCCAAGATCCACCAGGACCTGGTCTTTCAGTATGTGGAAGACCCCACCATCGTGCGGATTGAGCCAGAATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp GTCAGGTCTGACTGGTGGTCAGGACCCAGAGCGAGGGCGGGCGCCTaGCAGGTCATCTCAGTAGCGTTCAGAACCTCACAGATATTGATG +
Preference number: 5 (lower is better)
Translates to: VRSDWWSGPRARAGA*QVISVAFRTSQILM
Trigger: CATCAATATCTGTGAGGTTCTGAACGCTACTGAGATGACCTGTCAGGCGCCCGCCCTCGCTCTGGGTCCTGACCACCAGTCAGACCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp CCCATGTTCCCTCCTCAATCCAGCTCCAGAGGGGAAATACTGGTCTaGTTGGGCTGTGTCCCAAAACGCTGGGCCACGCTACTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: PMFPPQSSSRGEILV*LGCVPKRWATLLVG
Trigger: GCCCACTAGTAGCGTGGCCCAGCGTTTTGGGACACAGCCCAATCAGACCAGTATTTCCCCTCTGGAGCTGGATTGAGGAGGGAACATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CCA 90 bp TGGGTCTCCCTCCACTCCAATCCACTCCTGGGTGATTCCCCCTTGTaGACCTGTGCCGAAGGACTTCTTCAGCTTGCCACTTTTGGTGCC +
Preference number: 5 (lower is better)
Translates to: WVSLHSNPLLGDSPL*TCAEGLLQLATFGA
Trigger: GGCACCAAAAGTGGCAAGCTGAAGAAGTCCTTCGGCACAGGTCCACAAGGGGGAATCACCCAGGAGTGGATTGGAGTGGAGGGAGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CCA 90 bp GATGAACAGCTGGAGAACAGGAGTTCCAGAGTCACTGTTGCTCTGTaGGATCGGGGTCCCGTCTGTAGCTCAAGGGTAGGGCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: DEQLENRSSRVTVAL*DRGPVCSSRVGQRL
Trigger: CAGCCTCTGCCCTACCCTTGAGCTACAGACGGGACCCCGATCCCACAGAGCAACAGTGACTCTGGAACTCCTGTTCTCCAGCTGTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACGGATCTTCTTCAGCTaGCCACTTTTGGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGRIFFS*PLLVPT
Trigger: TGTGGGCACCAAAAGTGGCAAGCTGAAGAAGATCCG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAGTGAAGTTGGTCTTGTaGAGGATGAGCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGVKLVL*RMSRDW
Trigger: CCAGTCCCTGCTCATCCTCAACAAGACCAACTTCAC...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATATGGGCGTGCCAGGCTaGAGCTCCAGGATTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHMGVPG*SSRIPE
Trigger: CTCAGGAATCCTGGAGCTCAAGCCTGGCACGCCCAT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAACTAGGTGCCACATCTaGACTCCACTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGTRCHI*TPLSRS
Trigger: TGACCTGGAGAGTGGAGTCAAGATGTGGCACCTAGT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACATCAGCTCGACTCTTaGTCCCTCCCAGATCTGACA +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGHQLDS*SLPDLT
Trigger: TGTCAGATCTGGGAGGGACAAAGAGTCGAGCTGATG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGGGATCATGCTGCCATaGGAATGTACCTTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTGIMLP*ECTLAC
Trigger: ACAGGCCAAGGTACATTCCAATGGCAGCATGATCCC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGATCATGGAAAGACCCCTaGAAGGCCTTGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGSWKDP*KALKSW
Trigger: CCAGCTCTTCAAGGCCTTCAAGGGGTCTTTCCATGA...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp GCTGTGTCCTCCTTGCAAAGCCTCACGAGCTTGGATGTATACACCTaGTCCTTGGTGGTGGAGCCTGGTGGAGACACCATCTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: AVSSLQSLTSLDVYT*SLVVEPGGDTISGW
Trigger: CCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTGCAAGGAGGACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp TCACAGATATTGATGTGCTCCTTCCCTCCATGCTTGGCACGGATCTaGGGGTTCTGTATGAGGTCCAGGTGGGTCCCCCATACGGCGATG +
Preference number: 5 (lower is better)
Translates to: SQILMCSFPPCLARI*GFCMRSRWVPHTAM
Trigger: CATCGCCGTATGGGGGACCCACCTGGACCTCATACAGAACCCCCAGATCCGTGCCAAGCATGGAGGGAAGGAGCACATCAATATCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACAAAGCCTCACGAGCTaGGATGTATACACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLQSLTS*DVYTCS
Trigger: GGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAACCTGCGGGGCTCCTaGGACCGCTCACACCGCTCC +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLNLRGS*DRSHRS
Trigger: GGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATGGCGGGATCAGGTTCTaGCCCTTTAGGATGATGGGC +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHGGIRF*PFRMMG
Trigger: GCCCATCATCCTAAAGGGCAAGAACCTGATCCCGCC...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGGACCTCGGGGCTGTaGGCATTGTCTGGGCTGACA +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGTSGL*ALSGLT
Trigger: TGTCAGCCCAGACAATGCCAACAGCCCCGAGGTCCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCTGAGGGTCAGTGGCTaGGTCCAATCGTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLRVSG*VQSCWQ
Trigger: CTGCCAACACGATTGGACCAAGCCACTGACCCTCAG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp TCTCCAGGACCAGCAGCACGTTGTACTGAGAGACGGAGATATTGTTaGGATGGACCGTCAGCCGGACACACTGCTTCATCTCCGAGGCAA +
Preference number: 5 (lower is better)
Translates to: SPGPAARCTERRRYC*DGPSAGHTASSPRQ
Trigger: TTGCCTCGGAGATGAAGCAGTGTGTCCGGCTGACGGTCCATCCCAACAATATCTCCGTCTCTCAGTACAACGTGCTGCTGGTCCTGGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp TGGAGACGGTGGAGTTGTTCACTGCGTTATAGGCTGTCACCTGCTTaGACACTAATGCCACCACGGAACCATCTGGCACCTGGTAGTGGG +
Preference number: 5 (lower is better)
Translates to: WRRWSCSLRYRLSPA*TLMPPRNHLAPGSG
Trigger: CCCACTACCAGGTGCCAGATGGTTCCGTGGTGGCATTAGTGTCCAAGCAGGTGACAGCCTATAACGCAGTGAACAACTCCACCGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp ATACACACACAGCATCTGTTCCTGAGAAGCAATGTTCGCCCCAGGTaGGTCTCCCTCCACTCCAATCCACTCCTGGGTGATTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: IHTQHLFLRSNVRPR*VSLHSNPLLGDSPL
Trigger: CAAGGGGGAATCACCCAGGAGTGGATTGGAGTGGAGGGAGACCCACCTGGGGCGAACATTGCTTCTCAGGAACAGATGCTGTGTGTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTGGTCAGGGGCTCATaGCAGGTCTGGACGATGCGG +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVVRGS*QVWTMR
Trigger: CCGCATCGTCCAGACCTGCAATGAGCCCCTGACCAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCGTGGTCAGGGGCTCATaGCAGGTCTGGACGATGCGG +
Preference number: 5 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGVVRGS*QVWTMR
Trigger: CCGCATCGTCCAGACCTGCAATGAGCCCCTGACCAC...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp CTGGCCAGGCGACTTGGCTGCAGAAGTGGACAGATGAGCATAAGGTTATCCTACTCCAGCCTCAGCAGCTaGCAGATGCCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: LARRLGCRSGQMSIRLSYSSLSS*QMPWYR
Trigger: CCTGTACCAAGGCATCTGCAAGCTGCTGAGGCTGGA...GTAGGATAACCTTATGCTCATCTGTCCACTTCTGCAGCCAAGTCGCCTGGCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGGATGTCCTTCACCTaGAGCCAGGCCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGMSFT*SQARSS
Trigger: GCTGGACCTGGCCTGGCTCAAGGTGAAGGACATCCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCTCGGATAGTGACCTaGGTGCCCCCTTCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPRIVT*VPPSRG
Trigger: CCCCCGGGAAGGGGGCACCAAGGTCACTATCCGAGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCCACGCCAGCAACCTaGACATGGGAGGCGATGTCG +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSTPAT*TWEAMS
Trigger: CGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTGGCGTACTCCAGCTaGCTCTGCAGCACGGTCATG +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVAYSS*LCSTVM
Trigger: CATGACCGTGCTGCAGAGCAAGCTGGAGTACGCCAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGCAGTGGAGGTCATTaGGGAAGTCATTGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLCSGGH*GSHCLW
Trigger: CCACAAGCAATGACTTCCCAAATGACCTCCACTGCA...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAGTGGGAGGTTTGTCCTaGACTGATAACAATACTGGC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTVGGLS*TDNNTG
Trigger: GCCAGTATTGTTATCAGTCAAGGACAAACCTCCCAC...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTCTTTCCCTCACTGCTaGGCTGTCTGTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSFPHC*AVCEVG
Trigger: TCCCACCTCACAGACAGCCAAGCAGTGAGGGAAAGA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp ATGATGCCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTACCTCTCCTCATCCCCTaGGAAGTCATAGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: MMPCSKVQASAGDHPDFLPLLIP*EVIGFA
Trigger: AGCAAAACCTATGACTTCCAAGGGGATGAGGAGAGG...TAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGGCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGAATAGACCAAGTCTACTaGCTTTTGCAATCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGIDQVY*LLQSWR
Trigger: CCGCCAGGATTGCAAAAGCAAGTAGACTTGGTCTAT...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACAGGGCCTGGAGGCCTaGTTCCTGCTCAAAGCAGCC +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEQGLEA*FLLKAA
Trigger: GGCTGCTTTGAGCAGGAACAAGGCCTCCAGGCCCTG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCAGAGCCTGCGGGGCTaGACAGCTTCTCTTGCGGCG +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLQSLRG*TASLAA
Trigger: CGCCGCAAGAGAAGCTGTCAAGCCCCGCAGGCTCTG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS-3UTR CAA 90 bp TGCTGCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTGGCATCTTCTTCAGCTaGCCACTTTTGGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: CCSTVGSILSALCMHTHLGIFFS*PLLVPT
Trigger: TGTGGGCACCAAAAGTGGCAAGCTGAAGAAGATGCC...AAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp GCAGTACGGTGGGCTCCATCCTCTCTGCCCTGTGTATGCACACACACCTTTAAAGTTCCAGAGTCACTGTaGCTCTGTGGGATCGGGGTC +
Preference number: 5 (lower is better)
Translates to: AVRWAPSSLPCVCTHTFKVPESL*LCGIGV
Trigger: GACCCCGATCCCACAGAGCAACAGTGACTCTGGAAC...TTTAAAGGTGTGTGTGCATACACAGGGCAGAGAGGATGGAGCCCACCGTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS TCA 90 bp GCGTCACCAAGACCTTCAGGTCGCTGGAGAGCTTGTAAATCCGATTaGCGGCCCCCAAGTAAATGTGTCCTGTCCTCTCATCCACCACCA +
Preference number: 5 (lower is better)
Translates to: ASPRPSGRWRACKSD*RPPSKCVLSSHPPP
Trigger: TGGTGGTGGATGAGAGGACAGGACACATTTACTTGGGGGCCGTCAATCGGATTTACAAGCTCTCCAGCGACCTGAAGGTCTTGGTGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS GCA 90 bp ACTTTTGGTGCCCACAAAGGCCAGAGAGTGGTTCTTGTAGACATATaGGATGACAGACGTCATGCGGTCCCTGTCCTCCGTGAAGACGGG +
Preference number: 5 (lower is better)
Translates to: TFGAHKGQRVVLVDI*DDRRHAVPVLREDG
Trigger: CCCGTCTTCACGGAGGACAGGGACCGCATGACGTCTGTCATCGCATATGTCTACAAGAACCACTCTCTGGCCTTTGTGGGCACCAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS GCA 90 bp GTAGCGTTCAGAACCTCACAGATATTGATGTGCTCCTTCCCTCCATaGTTGGCACGGATCTGGGGGTTCTGTATGAGGTCCAGGTGGGTC +
Preference number: 5 (lower is better)
Translates to: VAFRTSQILMCSFPP*LARIWGFCMRSRWV
Trigger: GACCCACCTGGACCTCATACAGAACCCCCAGATCCGTGCCAAGCATGGAGGGAAGGAGCACATCAATATCTGTGAGGTTCTGAACGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp CATCATGGAAGACGTACGCGAACATGCCATCCGCCTCAGAGTTCTTaGTCAGTTTCCGGCTGGAGATGGTGGGAAAATACTCGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: HHGRRTRTCHPPQSS*SVSGWRWWENTRAS
Trigger: GGAAGCCCGAGTATTTTCCCACCATCTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCTTCCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp CCTTGCAAAGCCTCACGAGCTTGGATGTATACACCTGCTCCTTGGTaGTGGAGCCTGGTGGAGACACCATCTCAGGTTGGAGGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: PCKASRAWMYTPAPW*WSLVETPSQVGGSK
Trigger: TTTTGACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGTATACACCTGCTCCTaGGTGGTGGAGCCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMVYTCS*VVEPGG
Trigger: TCCACCAGGCTCCACCACCAAGGAGCAGGTGTATAC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GACACAGAGGGGTTGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCGTATACACCTGCTCCTaGGTGGTGGAGCCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: DTEGLPALTKSPALGLTFVYTCS*VVEPGG
Trigger: TCCACCAGGCTCCACCACCAAGGAGCAGGTGTATAC...GAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp TTCCCTAAGGACTTGGGGTGGCAGGACATGAGCTATGATGTATGGCTGGGGTCAAAGGCTGTGTCCTCCTaGCAAAGCCTCACGAGCTTG +
Preference number: 5 (lower is better)
Translates to: FPKDLGWQDMSYDVWLGSKAVSS*QSLTSL
Trigger: CAAGCTCGTGAGGCTTTGCAAGGAGGACACAGCCTT...TGACCCCAGCCATACATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp TCAACTCTTTCAAAGTCCTTGCTTTACCCATCCCTATGCAGGTGCACATGGCCTGGGATGTCCTTCACCTaGAGCCAGGCCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: STLSKSLLYPSLCRCTWPGMSFT*SQARSS
Trigger: GCTGGACCTGGCCTGGCTCAAGGTGAAGGACATCCC...AGGCCATGTGCACCTGCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGAGACGGAGATATTGTaGGGATGGACCGTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMETEIL*GWTVSR
Trigger: CCGGCTGACGGTCCATCCCAACAATATCTCCGTCTC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATAACTCCACGGGCAGGTaGTTGATCTCCATCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHNSTGR*LISIPS
Trigger: TGAAGGGATGGAGATCAACAACCTGCCCGTGGAGTT...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATCCACGCCAGCAACCTaGACATGGGAGGCGATGTCG +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESTPAT*TWEAMS
Trigger: CGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGGA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGCCTGTGATGGTCACTaGGGTCCCTCCGGACATGGG +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLACDGH*GPSGHG
Trigger: CCCATGTCCGGAGGGACCCAAGTGACCATCACAGGC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACAAGTGCACTCATGGTGTaGAACTCATTCATGTGCATC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTSALMV*NSFMCI
Trigger: GATGCACATGAATGAGTTCAACACCATGAGTGCACT...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGCTGAGGGTCAGTGGCTaGGTCCAATCGTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMLRVSG*VQSCWQ
Trigger: CTGCCAACACGATTGGACCAAGCCACTGACCCTCAG...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGGTTGGCTGGCATTTaGGGCTGTCTCCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRLAGI*GCLREA
Trigger: AGCCTCACGGAGACAGCCCAAAATGCCAGCCAACCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACCTGTGACTGACTTCTaGGGAGGGAATAAAATGATC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTPVTDF*GGNKMI
Trigger: GATCATTTTATTCCCTCCCAAGAAGTCAGTCACAGG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAAGCCAGACATGCAACGGGAGACACGGTACCAGGGACCTGGTTGCATGGGGGACCTGTGACTGACTTCTaGGGAGGGAATAAAATGATC +
Preference number: 5 (lower is better)
Translates to: EARHATGDTVPGTWLHGGPVTDF*GGNKMI
Trigger: GATCATTTTATTCCCTCCCAAGAAGTCAGTCACAGG...TCCCCCATGCAACCAGGTCCCTGGTACCGTGTCTCCCGTTGCATGTCTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAGGGACCCATAGGGCCTaGGCTAGACGAGGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEGTHRA*ARRGSS
Trigger: GGAGCTCCCTCGTCTAGCCAAGGCCCTATGGGTCCC...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTTGGGAAGTCATTGCTaGTGGATCCTCGGATGGGGA +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLGSHC*WILGWG
Trigger: TCCCCATCCGAGGATCCACAAGCAATGACTTCCCAA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGACCCCTTGAAGGCCTaGAAGAGCTGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDPLKA*KSWLGL
Trigger: CAGCCCCAGCCAGCTCTTCAAGGCCTTCAAGGGGTC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTCATGGAAAGACCCCTaGAAGGCCTTGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSWKDP*KALKSW
Trigger: CCAGCTCTTCAAGGCCTTCAAGGGGTCTTTCCATGA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 90 bp GCACCGACACCTTCATCTCTAGCACCTCATCTGAGGATGTGGTGTTaGAGACAATGTAGGATGGAGATCGCCTGTGGAAGAGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: APTPSSLAPHLRMWC*RQCRMEIACGRDRA
Trigger: AGCCCTGTCTCTTCCACAGGCGATCTCCATCCTACATTGTCTGCAACACCACATCCTCAGATGAGGTGCTAGAGATGAAGGTGTCGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp TGCAAAGCCTCACGAGCTTGGATGTATACACCTGCTCCTTGGTGGTaGAGCCTGGTGGAGACACCATCTCAGGTTGGAGGGTCAAAAAGT +
Preference number: 5 (lower is better)
Translates to: CKASRAWMYTPAPWW*SLVETPSQVGGSKS
Trigger: ACTTTTTGACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 90 bp CCACCTGCACCGACACCTTCATCTCTAGCACCTCATCTGAGGATGTaGTGTTGCAGACAATGTAGGATGGAGATCGCCTGTGGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: PPAPTPSSLAPHLRM*CCRQCRMEIACGRD
Trigger: GTCTCTTCCACAGGCGATCTCCATCCTACATTGTCTGCAACACCACATCCTCAGATGAGGTGCTAGAGATGAAGGTGTCGGTGCAGGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAGCGGGAGCGCCGCATaGACACTGCAGATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESGSAA*TLQMEP
Trigger: AGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGTATACACCTGCTCCTaGGTGGTGGAGCCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEVYTCS*VVEPGG
Trigger: TCCACCAGGCTCCACCACCAAGGAGCAGGTGTATAC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAAGGCTGTGTCCTCCTaGCAAAGCCTCACGAGCTTG +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMKAVSS*QSLTSL
Trigger: CAAGCTCGTGAGGCTTTGCAAGGAGGACACAGCCTT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGGATGTCCTTCACCTaGAGCCAGGCCAGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGMSFT*SQARSS
Trigger: GCTGGACCTGGCCTGGCTCAAGGTGAAGGACATCCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAGTTGCTCGTGGTCCTaGGAGAAGGCCATATCCCGG +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPESCSWS*EKAISR
Trigger: CCGGGATATGGCCTTCTCCAAGGACCACGAGCAACT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGACAGCTCCGGGACATaGTACGTCTCCAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLDSSGT*YVSRTS
Trigger: GCTGGTCCTGGAGACGTACAATGTCCCGGAGCTGTC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGCATGCTGGCTGGGCTaGGCCTCCCCCATCTCACAC +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSACWLG*ASPISH
Trigger: GTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGTGGCGTACTCCAGCTaGCTCTGCAGCACGGTCATG +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLVAYSS*LCSTVM
Trigger: CATGACCGTGCTGCAGAGCAAGCTGGAGTACGCCAC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTCCATATCTGCAGCTTaGGGCCGGTGGGAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLSISAA*GRWEQG
Trigger: GCCTTGCTCCCACCGGCCCAAAGCTGCAGATATGGA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTCAGGGGCAGGCAATaGCTCTTCCAGGTATGGCGG +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLRGRQ*LFQVWR
Trigger: CCGCCATACCTGGAAGAGCAATTGCCTGCCCCTGAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTTCTGGTCAGCTCCCTaGCCATGGGCCTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLFWSAP*PWAWPF
Trigger: GAATGGCCAGGCCCATGGCAAGGGAGCTGACCAGAA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGGTACCAGGGACCTGGTaGCATGGGGGAGGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLVPGTW*HGGGGD
Trigger: ATCTCCACCTCCCCCATGCAACCAGGTCCCTGGTAC...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATCAAGTCTACTTGCTTTaGCAATCCTGGCGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHQVYLL*QSWRRE
Trigger: TTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTTG...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCGTCCTGTGCCTGGATaGCGGCTGACTTCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLRPVPG*RLTSVH
Trigger: GTGCACAGAAGTCAGCCGCAATCCAGGCACAGGACG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCCTGTTCCAAGGTCCAGGCCTCGGCAGGCGACCACCCTGATTTCCTATGGACACAAAGGTACAGAAGCTaGCCTTTACCAAGTTACAAC +
Preference number: 5 (lower is better)
Translates to: PCSKVQASAGDHPDFLWTQRYRS*PLPSYN
Trigger: GTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTG...TGTCCATAGGAAATCAGGGTGGTCGCCTGCCGAGGCCTGGACCTTGGAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 90 bp GTAGAAGACAAAGCTGGTGCTGGCGAAGGTCATGCCGGTCTCCTTTaGTTTGAGCTGAAGCTGTACGACATGGTGGTCCCCATTCTCTGT +
Preference number: 5 (lower is better)
Translates to: VEDKAGAGEGHAGLL*FELKLYDMVVPILC
Trigger: ACAGAGAATGGGGACCACCATGTCGTACAGCTTCAGCTCAAATCAAAGGAGACCGGCATGACCTTCGCCAGCACCAGCTTTGTCTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp CCTCACGAGCTTGGATGTATACACCTGCTCCTTGGTGGTGGAGCCTaGTGGAGACACCATCTCAGGTTGGAGGGTCAAAAAGTAGACAAA +
Preference number: 5 (lower is better)
Translates to: PHELGCIHLLLGGGA*WRHHLRLEGQKVDK
Trigger: TTTGTCTACTTTTTGACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTTCCGGGTGCAAGTGTaGTGCAGCACACACCAGCCA +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLFRVQV*CSTHQP
Trigger: TGGCTGGTGTGTGCTGCACAACACTTGCACCCGGAA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTGGCGGGATCAGGTTCTaGCCCTTTAGGATGATGGGC +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLGGIRF*PFRMMG
Trigger: GCCCATCATCCTAAAGGGCAAGAACCTGATCCCGCC...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATCGGGGCTGTTGGCATaGTCTGGGCTGACACAGCTC +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESGLLA*SGLTQL
Trigger: GAGCTGTGTCAGCCCAGACAATGCCAACAGCCCCGA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATCCATATCTGCAGCTTaGGGCCGGTGGGAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESISAA*GRWEQG
Trigger: GCCTTGCTCCCACCGGCCCAAAGCTGCAGATATGGA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCCTGCAAGATCATCCTaGCCCCACTTCCTTGTCGCC +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLPARSS*PHFLVA
Trigger: GGCGACAAGGAAGTGGGGCAAGGATGATCTTGCAGG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAGCTGGAGGCTGAGGTaGGCTGGCATTTTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLSWRLR*AGILGC
Trigger: ACAGCCCAAAATGCCAGCCAACCTCAGCCTCCAGCT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTACAGCCCCTGGATGTTaGCTCTGCCAGTGGGGTAAG +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLTAPGC*LCQWGK
Trigger: CTTACCCCACTGGCAGAGCAAACATCCAGGGGCTGT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGAGGGTACGGGATAAGTaGGAGGGGAAGGTAAGGAAG +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMRVRDK*EGKVRK
Trigger: CTTCCTTACCTTCCCCTCCAACTTATCCCGTACCCT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTCATTTGGGAAGTCATaGCTTGTGGATCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHSFGKS*LVDPRM
Trigger: CATCCGAGGATCCACAAGCAATGACTTCCCAAATGA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGATGCCACCCCTAGCATaGTCCTCATCCAGGGAATGT +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMMPPLA*SSSREC
Trigger: ACATTCCCTGGATGAGGACAATGCTAGGGGTGGCAT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGGCGGAGGGAAAGCTaGGGTCTTCCCATGACCCAT +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLWRRES*GLPMTH
Trigger: ATGGGTCATGGGAAGACCCAAGCTTTCCCTCCGCCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp CACGAGCTTGGATGTATACACCTGCTCCTTGGTGGTGGAGCCTGGTaGAGACACCATCTCAGGTTGGAGGGTCAAAAAGTAGACAAAGTT +
Preference number: 5 (lower is better)
Translates to: HELGCIHLLLGGGAW*RHHLRLEGQKVDKV
Trigger: AACTTTGTCTACTTTTTGACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATCCAGCCTCAGCAGCTaGCAGATGCCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDESSLSS*QMPWYR
Trigger: CCTGTACCAAGGCATCTGCAAGCTGCTGAGGCTGGA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTCCCTAAGGACTTGGGGTGGCAGGACATGAGCTATGATGTATGGCTGGGGTCAAGACACCATCTCAGGTaGGAGGGTCAAAAAGTAGAC +
Preference number: 5 (lower is better)
Translates to: FPKDLGWQDMSYDVWLGSRHHLR*EGQKVD
Trigger: GTCTACTTTTTGACCCTCCAACCTGAGATGGTGTCT...TGACCCCAGCCATACATCATAGCTCATGTCCTGCCACCCCAAGTCCTTAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGCAAAGCCTCACGAGCTaGGATGTATACACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEQSLTS*DVYTCS
Trigger: GGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTG...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAACTCCACGGGCAGGTaGTTGATCTCCATCCCTTCA +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPENSTGR*LISIPS
Trigger: TGAAGGGATGGAGATCAACAACCTGCCCGTGGAGTT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAATTTGTGCACTTGCTTTaGGCACCAGACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEFVHLL*APDSSS
Trigger: GCTGGAGCTGTCTGGTGCCAAAAGCAAGTGCACAAA...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCGGGGGTTTGTGCACTaGCTTTTGGCACCAGACAGC +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRGFVH*LLAPDS
Trigger: GCTGTCTGGTGCCAAAAGCAAGTGCACAAACCCCCG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCTTCCGGCATTCAGGTaGGTGCCTGTGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLLPAFR*VPVMVT
Trigger: AGTGACCATCACAGGCACCAACCTGAATGCCGGAAG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTCTTCCGGCATTCAGGTaGGTGCCTGTGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLLPAFR*VPVMVT
Trigger: AGTGACCATCACAGGCACCAACCTGAATGCCGGAAG...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAAACATCACCACCACGTaGCTTCCGGCATTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPENITTT*LPAFRL
Trigger: CAACCTGAATGCCGGAAGCAACGTGGTGGTGATGTT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATGCCTGCCGATGAGGTaGGGGGACTCGCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKCLPMR*GDSQSS
Trigger: GCTGCTCTGCGAGTCCCCCAACCTCATCGGCAGGCA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTTCTGGTCAGCTCCCTaGCCATGGGCCTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSFWSAP*PWAWPF
Trigger: GAATGGCCAGGCCCATGGCAAGGGAGCTGACCAGAA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAGGTTGGCTGGCATTTaGGGCTGTCTCCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDERLAGI*GCLREA
Trigger: AGCCTCACGGAGACAGCCCAAAATGCCAGCCAACCT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAATGCCACCCCTAGCATaGTCCTCATCCAGGGAATGT +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEMPPLA*SSSREC
Trigger: ACATTCCCTGGATGAGGACAATGCTAGGGGTGGCAT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCGTCCTGTGCCTGGATaGCGGCTGACTTCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSRPVPG*RLTSVH
Trigger: GTGCACAGAAGTCAGCCGCAATCCAGGCACAGGACG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCGGCTCGCTGAGCCATaGTCTGTTGTGGTACCCTGG +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSRLAEP*SVVVPW
Trigger: CCAGGGTACCACAACAGACAATGGCTCAGCGAGCCG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCAGTGCAAGCACACTTTTTCCCTAAGGACTaGGGGTGGCAGGACATGAGC +
Preference number: 5 (lower is better)
Translates to: CLLSLNLQLWDSLSVQAHFFPKD*GWQDMS
Trigger: GCTCATGTCCTGCCACCCCAAGTCCTTAGGGAAAAA...GTGTGCTTGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp GAAATGATAGGAGCACATGACACCAAGTGTTTCCACTTCCTTCGCCACTCACCTTTACCCATGGGACGCTaGGGGCAGAGAAAAGAGACC +
Preference number: 5 (lower is better)
Translates to: EMIGAHDTKCFHFLRHSPLPMGR*GQRKET
Trigger: GGTCTCTTTTCTCTGCCCCAAGCGTCCCATGGGTAA...AGGTGAGTGGCGAAGGAAGTGGAAACACTTGGTGTCATGTGCTCCTATCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAATCTTGTTGACATTGTaGGTGGTGGTCAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEILLTL*VVVRGS
Trigger: TGAGCCCCTGACCACCACCAACAATGTCAACAAGAT...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAAGGCTGTGTCCTCCTaGCAAAGCCTCACGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEKAVSS*QSLTSL
Trigger: CAAGCTCGTGAGGCTTTGCAAGGAGGACACAGCCTT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATCATACTGGAGGGCGTaGCCCCTGGGTCCATCCACC +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSYWRA*PLGPST
Trigger: GGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTTCCGGGTGCAAGTGTaGTGCAGCACACACCAGCCA +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSFRVQV*CSTHQP
Trigger: TGGCTGGTGTGTGCTGCACAACACTTGCACCCGGAA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAAGTCTGGGTCAGCCTaGAGGCACAGCCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKKSGSA*RHSPQL
Trigger: GAGCTGCGGGCTGTGCCTCAAGGCTGACCCAGACTT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGTTTGTGCACTTGCTTTaGGCACCAGACAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLFVHLL*APDSSS
Trigger: GCTGGAGCTGTCTGGTGCCAAAAGCAAGTGCACAAA...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGCCTGTGATGGTCACTaGGGTCCCTCCGGACATGGG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKACDGH*GPSGHG
Trigger: CCCATGTCCGGAGGGACCCAAGTGACCATCACAGGC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGAACATCACCACCACGTaGCTTCCGGCATTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLNITTT*LPAFRL
Trigger: CAACCTGAATGCCGGAAGCAACGTGGTGGTGATGTT...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTACACGGGCCATCACTTaGTGCCTGCCGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSTRAIT*CLPMRL
Trigger: CAACCTCATCGGCAGGCACAAAGTGATGGCCCGTGT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGACTGAGGCACGGCTaGGTGTGTCCCCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQRLRHG*VCPPPG
Trigger: CCCTGGAGGGGGACACACCAAGCCGTGCCTCAGTCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTTTCTAGGCACACATTaGCCTGCCTGGCTAAAATCG +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMFLGTH*PAWLKS
Trigger: CGATTTTAGCCAGGCAGGCAAATGTGTGCCTAGAAA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGACAAGAAATCCTTTaGAGCTTTCCGCCTACACCT +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGQEIL*SFPPTP
Trigger: AGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTTGGGAAGTCATTGCTaGTGGATCCTCGGATGGGGA +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLLGSHC*WILGWG
Trigger: TCCCCATCCGAGGATCCACAAGCAATGACTTCCCAA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACATTACTGTGTCCCCTaGGTCCTGGGAAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEHYCVP*VLGKKT
Trigger: TGTCTTCTTTCCCAGGACCAAGGGGACACAGTAATG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCTCTCCTCATCCCCTaGGAAGTCATAGGTTTTGCT +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPLLIP*EVIGFA
Trigger: AGCAAAACCTATGACTTCCAAGGGGATGAGGAGAGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTTGTTTAACTTTGCTTaGCTTTCTGGTAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHLFNFA*LSGRHQ
Trigger: CTGGTGCCTACCAGAAAGCAAAGCAAAGTTAAACAA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GACACAGAGGGGTTGCCTGCTCTCACTAAATCTCCAGCTTTGGGACTCACTTTCCATGCCTACACTCCATaGTCCAAAATTACCCATGGG +
Preference number: 5 (lower is better)
Translates to: DTEGLPALTKSPALGLTFHAYTP*SKITHG
Trigger: CCCATGGGTAATTTTGGACAATGGAGTGTAGGCATG...GAAAGTGAGTCCCAAAGCTGGAGATTTAGTGAGAGCAGGCAACCCCTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGGGGGGAATTATGGAATaGTGCTGGATAGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: KHAYTPLSKITHGTLGAEGGIME*CWIVAM
Trigger: CATGGCCACTATCCAGCACAATTCCATAATTCCCCC...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS TCA 90 bp TCCAAGGATCTCCTCGCTGTATTTGCCCACATAGGAGAAGATCTCTaGGAGTGCACTCATGGTGTTGAACTCATTCATGTGCATCCGGGA +
Preference number: 5 (lower is better)
Translates to: SKDLLAVFAHIGEDL*ECTHGVELIHVHPG
Trigger: TCCCGGATGCACATGAATGAGTTCAACACCATGAGTGCACTCTCAGAGATCTTCTCCTATGTGGGCAAATACAGCGAGGAGATCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGCGGGAGCGCCGCATaGACACTGCAGATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSGSAA*TLQMEP
Trigger: AGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGACAGCTCCGGGACATaGTACGTCTCCAGGACCAGC +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKDSSGT*YVSRTS
Trigger: GCTGGTCCTGGAGACGTACAATGTCCCGGAGCTGTC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGGTCCTGGTGGATCTaGGCCCTGTCCACCTGCACC +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQRSWWI*ALSTCT
Trigger: GGTGCAGGTGGACAGGGCCAAGATCCACCAGGACCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAGCAGGGACTGGACGTaGTCCAGGATGAAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSRDWT*SRMKPN
Trigger: GTTTGGCTTCATCCTGGACAACGTCCAGTCCCTGCT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGAGCAAGGCACATTCTaGAAGATGGCATCCAGAATC +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEEQGTF*KMASRI
Trigger: GATTCTGGATGCCATCTTCAAGAATGTGCCTTGCTC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGATGCTCCATGGACTTaGCTGGAAATGGTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEDAPWT*LEMVWF
Trigger: AAACCACACCATTTCCAGCAAAGTCCATGGAGCATC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAAGGACAAGAAATCCTTTaGAGCTTTCCGCCTACACCT +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEGQEIL*SFPPTP
Trigger: AGGTGTAGGCGGAAAGCTCAAAAGGATTTCTTGTCC...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGGGTACGGGATAAGTaGGAGGGGAAGGTAAGGAAG +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPRVRDK*EGKVRK
Trigger: CTTCCTTACCTTCCCCTCCAACTTATCCCGTACCCT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGACTTTGTCAGTGATTTaGATGGCTCAGTCTGGTACC +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMTLSVI*MAQSGT
Trigger: GGTACCAGACTGAGCCATCAAAATCACTGACAAAGT...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGGATCATGCTGCCATaGGAATGTACCTTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGIMLP*ECTLAC
Trigger: ACAGGCCAAGGTACATTCCAATGGCAGCATGATCCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCATTACTGTGTCCCCTaGGTCCTGGGAAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLHYCVP*VLGKKT
Trigger: TGTCTTCTTTCCCAGGACCAAGGGGACACAGTAATG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TCCCACAGGACAAAGTTGGCCCAATTCCTTTCTCTGGGAGCCCGCAAGCCACATTGCTCGGTTAAGTATTaGACTTCACATTACTGTGTC +
Preference number: 5 (lower is better)
Translates to: SHRTKLAQFLSLGARKPHCSVKY*TSHYCV
Trigger: GACACAGTAATGTGAAGTCAAATACTTAACCGAGCA...ATGTGGCTTGCGGGCTCCCAGAGAAAGGAATTGGGCCAACTTTGTCCTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGGGCTTCTCTGGGCCTaGTGCCTGCAGAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQGLLWA*CLQSTF
Trigger: GAAGGTGCTCTGCAGGCACAAGGCCCAGAGAAGCCC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCTGAGCCATTGTCTGTaGTGGTACCCTGGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPLSHCL*WYPGVA
Trigger: AGCAACTCCAGGGTACCACAACAGACAATGGCTCAG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 90 bp ACCGGATCATGTTTTCATATTTACTTGCTGAGGTCCTGGAGACGGTaGAGTTGTTCACTGCGTTATAGGCTGTCACCTGCTTGGACACTA +
Preference number: 5 (lower is better)
Translates to: TGSCFHIYLLRSWRR*SCSLRYRLSPAWTL
Trigger: TAGTGTCCAAGCAGGTGACAGCCTATAACGCAGTGAACAACTCCACCGTCTCCAGGACCTCAGCAAGTAAATATGAAAACATGATCCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATCCAGCCTCAGCAGCTaGCAGATGCCTTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSSLSS*QMPWYR
Trigger: CCTGTACCAAGGCATCTGCAAGCTGCTGAGGCTGGA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GACTACACTTTATTTCCCAGTAAGCTAGTAGAAATGATAGGAGCACATGACACCTCCGCCTCAGAGTTCTaGGTCAGTTTCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: DYTLFPSKLVEMIGAHDTSASEF*VSFRLE
Trigger: CTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGGA...GGTGTCATGTGCTCCTATCATTTCTACTAGCTTACTGGGAAATAAAGTGTAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCAAAGCCTCACGAGCTaGGATGTATACACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSQSLTS*DVYTCS
Trigger: GGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCGGATCTTCTTCAGCTaGCCACTTTTGGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSRIFFS*PLLVPT
Trigger: TGTGGGCACCAAAAGTGGCAAGCTGAAGAAGATCCG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACGGGGGTTTGTGCACTaGCTTTTGGCACCAGACAGC +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKRGFVH*LLAPDS
Trigger: GCTGTCTGGTGCCAAAAGCAAGTGCACAAACCCCCG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAATGGGCGTGCCAGGCTaGAGCTCCAGGATTCCTGAG +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQMGVPG*SSRIPE
Trigger: CTCAGGAATCCTGGAGCTCAAGCCTGGCACGCCCAT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCTCCTCATTCGTTATTaGCACCCTGCTGCTGACATG +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPLLIRY*HPAADM
Trigger: CATGTCAGCAGCAGGGTGCAAATAACGAATGAGGAG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAACAGGGACTAGGCTGTaGGCCCCAGCCGTCTATGGA +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQTGTRL*APAVYG
Trigger: TCCATAGACGGCTGGGGCCAACAGCCTAGTCCCTGT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAAGCTGGAGGCTGAGGTaGGCTGGCATTTTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKSWRLR*AGILGC
Trigger: ACAGCCCAAAATGCCAGCCAACCTCAGCCTCCAGCT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACTAAGATGTTTCTCCTaGTCTCCCATAGTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELRCFS*SPIVVN
Trigger: GTTCACCACTATGGGAGACAAGGAGAAACATCTTAG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CAGTGTTACCTGAGGCTGTGTCTCAGCTCCCCACTCTATAAAATAAGGCTCTTGCCTCTTCCCATTAGGTaGCTCATGTCTTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: QCYLRLCLSSPLYKIRLLPLPIR*LMSFPP
Trigger: TGGTGGAAAAGACATGAGCAACCTAATGGGAAGAGG...CAAGAGCCTTATTTTATAGAGTGGGGAGCTGAGACACAGCCTCAGGTAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACACCTGGTACTGCACTaGCCAAAACCTTTGGTTATT +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEHLVLH*PKPLVI
Trigger: AATAACCAAAGGTTTTGGCAAGTGCAGTACCAGGTG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGGGCAAGGACAGCTTTTaGACAATGTTGCTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMGKDSF*TMLLVF
Trigger: AAAGACAAGCAACATTGTCAAAAAGCTGTCCTTGCC...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAACAGCCCCTGGATGTTaGCTCTGCCAGTGGGGTAAG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKTAPGC*LCQWGK
Trigger: CTTACCCCACTGGCAGAGCAAACATCCAGGGGCTGT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGTGGTACCCTGGAGTaGCTGGTTGCTATGGTAACT +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDECGTLE*LVAMVT
Trigger: AGTTACCATAGCAACCAGCAACTCCAGGGTACCACA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCAGAGACTCTTTCAAAGTCCTaGCTTTACCCATCCCTATGC +
Preference number: 5 (lower is better)
Translates to: KHAYTPLSKITHGTLGAETLSKS*LYPSLC
Trigger: GCATAGGGATGGGTAAAGCAAGGACTTTGAAAGAGT...CTCTGCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCTGTTTTGCAGGAGTGTaGGACCAGTTAGAATTCCCA +
Preference number: 5 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGCFAGV*DQLEFP
Trigger: TGGGAATTCTAACTGGTCCAACACTCCTGCAAAACA...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTATCTTGTTGACATTGTaGGTGGTGGTCAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSILLTL*VVVRGS
Trigger: TGAGCCCCTGACCACCACCAACAATGTCAACAAGAT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATAATCTTGTTGACATTGTaGGTGGTGGTCAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIILLTL*VVVRGS
Trigger: TGAGCCCCTGACCACCACCAACAATGTCAACAAGAT...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAGACACCATCTCAGGTaGGAGGGTCAAAAAGTAGAC +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDERHHLR*EGQKVD
Trigger: GTCTACTTTTTGACCCTCCAACCTGAGATGGTGTCT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGTTGCTCGTGGTCCTaGGAGAAGGCCATATCCCGG +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSCSWS*EKAISR
Trigger: CCGGGATATGGCCTTCTCCAAGGACCACGAGCAACT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAAAGAACCTCACAGATATaGATGTGCTCCTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDERTSQI*MCSFPP
Trigger: TGGAGGGAAGGAGCACATCAATATCTGTGAGGTTCT...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTGGACAGCCAGAAAATTaGTCTGTCCTTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPGQPEN*SVLVSS
Trigger: AGAGGAGACAAGGACAGACAAATTTTCTGGCTGTCC...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTACTTTGTCAGTGATTTaGATGGCTCAGTCTGGTACC +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLTLSVI*MAQSGT
Trigger: GGTACCAGACTGAGCCATCAAAATCACTGACAAAGT...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACTACCACTCTGTTTCTaGTCTTCCTCTACTTATTCC +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPELPLCF*SSSTYS
Trigger: GGAATAAGTAGAGGAAGACAAGAAACAGAGTGGTAG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACCATTGGAATGTACCTaGGCCTGTGGGACACTTGGG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKPLECT*ACGTLG
Trigger: CCCAAGTGTCCCACAGGCCAAGGTACATTCCAATGG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGTGAGGTGGGAGGTTaGTCCTTGACTGATAACAAT +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLCEVGG*SLTDNN
Trigger: ATTGTTATCAGTCAAGGACAAACCTCCCACCTCACA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAACCATGAGGAGAGGTTaGCAGAGTGTCCCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKTMRRG*QSVPAS
Trigger: TGAGGCTGGGACACTCTGCAAACCTCTCCTCATGGT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGGCCTTGTTCCTGCTCAAAGCAGCCAACACACGACTAAGCAAAGACCGTATGTCGTTTTGTTTAACTTaGCTTTGCTTTCTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: EALFLLKAANTRLSKDRMSFCLT*LCFLVG
Trigger: GCCTACCAGAAAGCAAAGCAAAGTTAAACAAAACGA...CATACGGTCTTTGCTTAGTCGTGTGTTGGCTGCTTTGAGCAGGAACAAGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGGCGGAGGGAAAGCTaGGGTCTTCCCATGACCCAT +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQWRRES*GLPMTH
Trigger: ATGGGTCATGGGAAGACCCAAGCTTTCCCTCCGCCA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCAAGTCTACTTGCTTTaGCAATCCTGGCGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSQVYLL*QSWRRE
Trigger: TTCCCTCCGCCAGGATTGCAAAAGCAAGTAGACTTG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTGTGGTACCCTGGAGTaGCTGGTTGCTATGGTAACT +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSCGTLE*LVAMVT
Trigger: AGTTACCATAGCAACCAGCAACTCCAGGGTACCACA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACAAAGGTACAGAAGCTaGCCTTTACCAAGTTACAAC +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEQRYRS*PLPSYN
Trigger: GTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGCTTGGGGCAGAGAAAAGAGACCAACTACCTAGCCAAGCTAAGCAGAGACACAAAGAGAATTACACTGTaGTGTATCCTCCAGGAACTA +
Preference number: 5 (lower is better)
Translates to: RLGQRKETNYLAKLSRDTKRITL*CILQEL
Trigger: TAGTTCCTGGAGGATACACAACAGTGTAATTCTCTT...TGTGTCTCTGCTTAGCTTGGCTAGGTAGTTGGTCTCTTTTCTCTGCCCCAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTAGACACCATCTCAGGTaGGAGGGTCAAAAAGTAGAC +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSRHHLR*EGQKVD
Trigger: GTCTACTTTTTGACCCTCCAACCTGAGATGGTGTCT...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAAGCAGGGACTGGACGTaGTCCAGGATGAAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSRDWT*SRMKPN
Trigger: GTTTGGCTTCATCCTGGACAACGTCCAGTCCCTGCT...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTGAGCAAGGCACATTCTaGAAGATGGCATCCAGAATC +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSEQGTF*KMASRI
Trigger: GATTCTGGATGCCATCTTCAAGAATGTGCCTTGCTC...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTAGTGCACTCATGGTGTaGAACTCATTCATGTGCATC +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPSALMV*NSFMCI
Trigger: GATGCACATGAATGAGTTCAACACCATGAGTGCACT...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTCCTCTTCCCATTAGGTaGCTCATGTCTTTTCCACCA +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSPLPIR*LMSFPP
Trigger: TGGTGGAAAAGACATGAGCAACCTAATGGGAAGAGG...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCACCTGGTACTGCACTaGCCAAAACCTTTGGTTATT +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPHLVLH*PKPLVI
Trigger: AATAACCAAAGGTTTTGGCAAGTGCAGTACCAGGTG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CGTTCACACACGCAGCTTCCATCCAGCAAATCTGTGTTAAATACGTTTGTGTCTTCATTTGGGAAGTCATaGCTTGTGGATCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: RSHTQLPSSKSVLNTFVSSFGKS*LVDPRM
Trigger: CATCCGAGGATCCACAAGCAATGACTTCCCAAATGA...AGACACAAACGTATTTAACACAGATTTGCTGGATGGAAGCTGCGTGTGTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATGTGAGGTGGGAGGTTaGTCCTTGACTGATAACAAT +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDECEVGG*SLTDNN
Trigger: ATTGTTATCAGTCAAGGACAAACCTCCCACCTCACA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AGTCAAACATGCCTACACTCCATTGTCCAAAATTACCCATGGGACGCTTGGGGCTGCCTTCATACACTCTaGACTACACTTTATTTCCCA +
Preference number: 5 (lower is better)
Translates to: SQTCLHSIVQNYPWDAWGCLHTL*TTLYFP
Trigger: TGGGAAATAAAGTGTAGTCAAGAGTGTATGAAGGCA...GCCCCAAGCGTCCCATGGGTAATTTTGGACAATGGAGTGTAGGCATGTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAAGTGAAGTTGGTCTTGTaGAGGATGAGCAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQVKLVL*RMSRDW
Trigger: CCAGTCCCTGCTCATCCTCAACAAGACCAACTTCAC...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACTCCTCATTCGTTATTaGCACCCTGCTGCTGACATG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLLIRY*HPAADM
Trigger: CATGTCAGCAGCAGGGTGCAAATAACGAATGAGGAG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGATAGATGCTTTCTCTaGACAGCACTCAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKDRCFL*TALRAL
Trigger: CAGAGCCCTGAGTGCTGTCAAGAGAAAGCATCTATC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCTACCACTCTGTTTCTaGTCTTCCTCTACTTATTCC +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPLPLCF*SSSTYS
Trigger: GGAATAAGTAGAGGAAGACAAGAAACAGAGTGGTAG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AACAGATGGGGAGATGGATGCCAAGGCCAAGGTCATTTGTATGTCCCTCTTCTTTGCTCGGTTAAGTATTaGACTTCACATTACTGTGTC +
Preference number: 5 (lower is better)
Translates to: NRWGDGCQGQGHLYVPLLCSVKY*TSHYCV
Trigger: GACACAGTAATGTGAAGTCAAATACTTAACCGAGCA...AAGAAGAGGGACATACAAATGACCTTGGCCTTGGCATCCATCTCCCCATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TGGGAATGGAATAAAGTGAGGCTCCCGCAACCCAGGATTTTCAGCCTACCTGAACCTTCCAAAATGTGCTaGAGTCAAAAGATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: WEWNKVRLPQPRIFSLPEPSKMC*SQKIKD
Trigger: ATCTTTGATCTTTTGACTCAAGCACATTTTGGAAGG...TTCAGGTAGGCTGAAAATCCTGGGTTGCGGGAGCCTCACTTTATTCCATTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp GAGAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGACTAAATCTCCAGCTTaGGGACTCACTTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: ENYTVVYPPGTIRGLVWWTKSPA*GLTFSA
Trigger: TGCACTGAAAGTGAGTCCCAAAGCTGGAGATTTAGT...CCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS TCA 90 bp CCAATATCCAAGGCTGACAACACACTAAATAAGCCTACACAGCTCTaGAGTTTTTCTCAGTTTGATGAACAGCTGGAGAACAGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: PISKADNTLNKPTQL*SFSQFDEQLENRSS
Trigger: GGAACTCCTGTTCTCCAGCTGTTCATCAAACTGAGAAAAACTTCAGAGCTGTGTAGGCTTATTTAGTGTGTTGTCAGCCTTGGATATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAATTTCTAGGCACACATTaGCCTGCCTGGCTAAAATCG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKFLGTH*PAWLKS
Trigger: CGATTTTAGCCAGGCAGGCAAATGTGTGCCTAGAAA...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAGGACAGCCAGAAAATTaGTCTGTCCTTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKGQPEN*SVLVSS
Trigger: AGAGGAGACAAGGACAGACAAATTTTCTGGCTGTCC...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATGCAGTGGAGGTCATTaGGGAAGTCATTGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQCSGGH*GSHCLW
Trigger: CCACAAGCAATGACTTCCCAAATGACCTCCACTGCA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAAATAGACCAAGTCTACTaGCTTTTGCAATCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKIDQVY*LLQSWR
Trigger: CCGCCAGGATTGCAAAAGCAAGTAGACTTGGTCTAT...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTGGAGGTAGAATCTCCTAGATGCACTCTGCATTTCACGTTGACCCTTGATGAATTTCTTAAGCGTCCTTaGGGTTGCTCTTTAACTGTA +
Preference number: 5 (lower is better)
Translates to: LEVESPRCTLHFTLTLDEFLKRP*GCSLTV
Trigger: TACAGTTAAAGAGCAACCCAAAGGACGCTTAAGAAA...TTCATCAAGGGTCAACGTGAAATGCAGAGTGCATCTAGGAGATTCTACCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CTCTTTCCTTTTCTCCCCCTGTGTTACATTTCTGCTACTAGGATTCAGATGAAACTAAGATGTTTCTCCTaGTCTCCCATAGTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: LFPFLPLCYISATRIQMKLRCFS*SPIVVN
Trigger: GTTCACCACTATGGGAGACAAGGAGAAACATCTTAG...TTTCATCTGAATCCTAGTAGCAGAAATGTAACACAGGGGGAGAAAAGGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp TTTCCAAATGAGAGGAGTGGTCATTTAGGTTTCCTGTCAAGAGCATGCCACCCTCCTTCCAAAATGTGCTaGAGTCAAAAGATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: FPNERSGHLGFLSRACHPPSKMC*SQKIKD
Trigger: ATCTTTGATCTTTTGACTCAAGCACATTTTGGAAGG...AGGGTGGCATGCTCTTGACAGGAAACCTAAATGACCACTCCTCTCATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp CCTGTGGCACACCCTAAAGAGAATTACACTGTTGTGTATCCTCCAGGAACTATATATTTACACATTGTTTaGCAGGAGTGTTGGACCAGT +
Preference number: 5 (lower is better)
Translates to: PVAHPKENYTVVYPPGTIYLHIV*QECWTS
Trigger: ACTGGTCCAACACTCCTGCAAAACAATGTGTAAATA...TATAGTTCCTGGAGGATACACAACAGTGTAATTCTCTTTAGGGTGTGCCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp GAATTACACTGTTGTGTATCCTCCAGGAACTATACGAGGTTTAGTGTGGTGGTTGAAGTTTTTCTCAGTTaGATGAACAGCTGGAGAACA +
Preference number: 5 (lower is better)
Translates to: ELHCCVSSRNYTRFSVVVEVFLS*MNSWRT
Trigger: TGTTCTCCAGCTGTTCATCAAACTGAGAAAAACTTC...AACCACCACACTAAACCTCGTATAGTTCCTGGAGGATACACAACAGTGTAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAACAAGGCCAAGGTCATTaGTATGTCCCTCTTCTTAAT +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQQGQGH*YVPLLN
Trigger: ATTAAGAAGAGGGACATACAAATGACCTTGGCCTTG...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATTGTTTAACTTTGCTTaGCTTTCTGGTAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQLFNFA*LSGRHQ
Trigger: CTGGTGCCTACCAGAAAGCAAAGCAAAGTTAAACAA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATCGTTTTGTTTAACTTaGCTTTGCTTTCTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQSFCLT*LCFLVG
Trigger: GCCTACCAGAAAGCAAAGCAAAGTTAAACAAAACGA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS-3UTR CAA 90 bp AATTATAACAAAGGTACAGAAGCTTGCCTTTACCAAGTTACAACTGGGCTCCAATTTCTTAAGCGTCCTTaGGGTTGCTCTTTAACTGTA +
Preference number: 5 (lower is better)
Translates to: NYNKGTEACLYQVTTGLQFLKRP*GCSLTV
Trigger: TACAGTTAAAGAGCAACCCAAAGGACGCTTAAGAAA...TTGGAGCCCAGTTGTAACTTGGTAAAGGCAAGCTTCTGTACCTTTGTTATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp GCCTATGCCGCTGCCTCTCGCCCTCCTCTGAACGTGTaGGTGTGCGCGCGTGTGGCTGCCTCCTCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: AYAAASRPPLNV*VCARVAASSSP
Trigger: GGGGCTGGAGGAGGCAGCCACACGCGCGCACACGCACACGTTCAGAGGAGGGCGAGAGGCAGCGGCATAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp TCCCCTGGACGCGCCGCGTTTCCCTCCTTCAGCGGGAGCGCCGCATaGACACTGCAGATGGAGCCTATGCCGCTGCCTCTCGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SPGRAAFPSFSGSAA*TLQMEPMPLPLALL
Trigger: GAGGAGGGCGAGAGGCAGCGGCATAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCTGAAGGAGGGAAACGCGGCGCGTCCAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS GCA 72 bp GCCATATCCCGGAGGACTGGGCCGGGGTCCACCACCTaGACCGTCTCATACTGGAGGGCGTTGCCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: AISRRTGPGSTT*TVSYWRALPLG
Trigger: ACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGGTGGACCCCGGCCCAGTCCTCCGGGATATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp ACTGGGCCGGGGTCCACCACCTGCACCGTCTCATACTaGAGGGCGTTGCCCCTGGGTCCATCCACCCGGATC +
Preference number: 6 (lower is better)
Translates to: TGPGSTTCTVSY*RALPLGPSTRI
Trigger: GATCCGGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGGTGGACCCCGGCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp CCTACTGGACGCGCCGCGTTTCCCTCCTTCAGCGGGAGCGCCGCATaGACACTGCAGATGGAGCCTATGCCGCTGCCTCTCGCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PTGRAAFPSFSGSAA*TLQMEPMPLPLALL
Trigger: GAGGAGGGCGAGAGGCAGCGGCATAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCTGAAGGAGGGAAACGCGGCGCGTCCAGTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321063.8
CDS TCA 72 bp GCGCCGCGTTTCCCTCCTTCAGCGGGAGCGCCGCATTaGCACTGCAGATGGAGCCTATGCCGCTGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: APRFPPSAGAPH*HCRWSLCRCLS
Trigger: CGAGAGGCAGCGGCATAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCTGAAGGAGGGAAACGCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp TCGGCGGGCTCTCCTCGGAATGTGACAAATGACCGCTaGTTCTGGGACAGCGGGGCTGGCTGCCGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: SAGSPRNVTNDR*FWDSGAGCRVS
Trigger: GCTCACCCGGCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGCCCGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CAA 72 bp CGCGCCGCGTTTCCCTCCTTCAGCGGGAGCGCCGCATaGACACTGCAGATGGAGCCTATGCCGCTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: RAAFPSFSGSAA*TLQMEPMPLPL
Trigger: GAGAGGCAGCGGCATAGGCTCCATCTGCAGTGTCAATGCGGCGCTCCCGCTGAAGGAGGGAAACGCGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp GGAACGCGGAGGGCGCCGAATCAGAGCCTGCGGGGCTaGACAGCTTCTCTTGCGGCGTCCAAGGTGGGCGTA +
Preference number: 6 (lower is better)
Translates to: GTRRAPNQSLRG*TASLAASKVGV
Trigger: TACGCCCACCTTGGACGCCGCAAGAGAAGCTGTCAAGCCCCGCAGGCTCTGATTCGGCGCCCTCCGCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS TCA 72 bp GAAACCCTCGGCGGGCTCTCCTCGGAATGTGACAAATaGCCGCTGCTTCTGGGACAGCGGGGCTGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: ETLGGLSSECDK*PLLLGQRGWLP
Trigger: CGGCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGCCCGCCGAGGGTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS TCA 72 bp GCAGGGCGGGCACTCGCTGCTCGCTGCCCTGAATGTTaGGGATGCATTCGTAGCCACGCTGCCCAGACTGGG +
Preference number: 6 (lower is better)
Translates to: AGRALAARCPEC*GCIRSHAAQTG
Trigger: CCCAGTCTGGGCAGCGTGGCTACGAATGCATCCTCAACATTCAGGGCAGCGAGCAGCGAGTGCCCGCCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp GCACAGTCGTCCCCTCAGAGGGCCAGGACTCAGCAATaGAGTCTCCCCTACTGGACGCGCCGCGTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: AQSSPQRARTQQ*SLPYWTRRVSL
Trigger: GAGGGAAACGCGGCGCGTCCAGTAGGGGAGACTGCATTGCTGAGTCCTGGCCCTCTGAGGGGACGACTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000423507.6
CDS CCA 72 bp CCAGGGCATGGCTTTCATGGCAGAGGCGGGTCCCAGTaGCACAGCAGCACTCAGGCACAGTCGTCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: PGHGFHGRGGSQ*HSSTQAQSSPQ
Trigger: CTGAGGGGACGACTGTGCCTGAGTGCTGCTGTGCCACTGGGACCCGCCTCTGCCATGAAAGCCATGCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp GTGCACTTGCTTTTGGCACCAGACAGCTCCAGCCACTaGCTCTCCTGGGCAGGGCAGTGCTGGCGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VHLLLAPDSSSH*LSWAGQCWRRV
Trigger: CACCCTGCGCCAGCACTGCCCTGCCCAGGAGAGCCAGTGGCTGGAGCTGTCTGGTGCCAAAAGCAAGTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp CTTCCGGCATTCAGGTTGGTGCCTGTGATGGTCACTTaGGTCCCTCCGGACATGGGCCCCCGGCTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: LPAFRLVPVMVT*VPPDMGPRLGF
Trigger: GAAGCCCAGCCGGGGGCCCATGTCCGGAGGGACCCAAGTGACCATCACAGGCACCAACCTGAATGCCGGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp AGCAGCCGAGGAACGCGGAGGGCGCCGAATCAGAGCCTGCGGGGCTaGACAGCTTCTCTTGCGGCGTCCAAGGTGGGCGTAATGTCCAAC +
Preference number: 6 (lower is better)
Translates to: SSRGTRRAPNQSLRG*TASLAASKVGVMSN
Trigger: GTTGGACATTACGCCCACCTTGGACGCCGCAAGAGAAGCTGTCAAGCCCCGCAGGCTCTGATTCGGCGCCCTCCGCGTTCCTCGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS TCA 72 bp CCACCACGTTGCTTCCGGCATTCAGGTTGGTGCCTGTaGTGGTCACTTGGGTCCCTCCGGACATGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: PPRCFRHSGWCL*WSLGSLRTWAP
Trigger: GGGGGCCCATGTCCGGAGGGACCCAAGTGACCATCACAGGCACCAACCTGAATGCCGGAAGCAACGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp TCAGCCGGACACACTGCTTCATCTCCGAGGCAAACCTaGGGGGCTCCTTGGACCGCTCACACCGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SAGHTASSPRQT*GAPWTAHTAPS
Trigger: GGAAGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGATGAAGCAGTGTGTCCGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp CGACACACAGCCACGCAGATCTCCACGAAGCCTGCATaGTGGCTGGGCTTGGCCTCCCCCATCTCACACACG +
Preference number: 6 (lower is better)
Translates to: RHTATQISTKPA*WLGLASPISHT
Trigger: CGTGTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATCTGCGTGGCTGTGTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp AGGCCGACACACAGCCACGCAGATCTCCACGAAGCCTaGATGCTGGCTGGGCTTGGCCTCCCCCATCTCACA +
Preference number: 6 (lower is better)
Translates to: RPTHSHADLHEA*MLAGLGLPHLT
Trigger: TGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATCTGCGTGGCTGTGTGTCGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp GGAGGTGGGAGAGAAGGCAGGTCCAGTTCCAGGGCATaGCTTTCATGGCAGAGGCGGGTCCCAGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: GGGREGRSSSRA*LSWQRRVPVAQ
Trigger: CTGTGCCACTGGGACCCGCCTCTGCCATGAAAGCCATGCCCTGGAACTGGACCTGCCTTCTCTCCCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp CTCGTGGTCCTTGGAGAAGGCCATATCCCGGAGGACTaGGCCGGGGTCCACCACCTGCACCGTCTCATACTG +
Preference number: 6 (lower is better)
Translates to: LVVLGEGHIPED*AGVHHLHRLIL
Trigger: CAGTATGAGACGGTGCAGGTGGTGGACCCCGGCCCAGTCCTCCGGGATATGGCCTTCTCCAAGGACCACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp TGCCTGCCGATGAGGTTGGGGGACTCGCAGAGCAGCTaGACATCTGACACGGTCACGGTGCACGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CLPMRLGDSQSS*TSDTVTVHGFS
Trigger: GGAGAAGCCGTGCACCGTGACCGTGTCAGATGTCCAGCTGCTCTGCGAGTCCCCCAACCTCATCGGCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp AGGCACGGCTTGGTGTGTCCCCCTCCAGGGCGGCCCTaGAAGGACGGTTCTCAGCTGTCTAAGCTCATGAGG +
Preference number: 6 (lower is better)
Translates to: RHGLVCPPPGRP*KDGSQLSKLMR
Trigger: CCTCATGAGCTTAGACAGCTGAGAACCGTCCTTCCAGGGCCGCCCTGGAGGGGGACACACCAAGCCGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp GCCCCAGGTGGGTCTCCCTCCACTCCAATCCACTCCTaGGTGATTCCCCCTTGTGGACCTGTGCCGAAGGAC +
Preference number: 6 (lower is better)
Translates to: APGGSPSTPIHS*VIPPCGPVPKD
Trigger: GTCCTTCGGCACAGGTCCACAAGGGGGAATCACCCAGGAGTGGATTGGAGTGGAGGGAGACCCACCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CAA 72 bp GGGTCCACCACCTGCACCGTCTCATACTGGAGGGCGTaGCCCCTGGGTCCATCCACCCGGATCTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: GSTTCTVSYWRA*PLGPSTRIFFS
Trigger: GCTGAAGAAGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGGTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp CACTGCTTCATCTCCGAGGCAAACCTGCGGGGCTCCTaGGACCGCTCACACCGCTCCTTCCGGGTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: HCFISEANLRGS*DRSHRSFRVQV
Trigger: CACTTGCACCCGGAAGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGATGAAGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp ACTGGGCCGGGGTCCACCACCTGCACCGTCTCATACTGGAGGGCGTaGCCCCTGGGTCCATCCACCCGGATCTTCTTCAGCTTGCCACTT +
Preference number: 6 (lower is better)
Translates to: TGPGSTTCTVSYWRA*PLGPSTRIFFSLPL
Trigger: AAGTGGCAAGCTGAAGAAGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGGTGGACCCCGGCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp AGCCGGACACACTGCTTCATCTCCGAGGCAAACCTGCGGGGCTCCTaGGACCGCTCACACCGCTCCTTCCGGGTGCAAGTGTTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SRTHCFISEANLRGS*DRSHRSFRVQVLCS
Trigger: GCTGCACAACACTTGCACCCGGAAGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGATGAAGCAGTGTGTCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp CCAGACTGGGGCTGGGGGAGGTTCTTGGCCTTCAGCGTGATAGGCTaGATCACCTCCACGGGCACCAGGATCTTGTCCACTCGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PDWGWGRFLAFSVIG*ITSTGTRILSTRSS
Trigger: GCTGCTGCGAGTGGACAAGATCCTGGTGCCCGTGGAGGTGATCAAGCCTATCACGCTGAAGGCCAAGAACCTCCCCCAGCCCCAGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp TCCATGCCACCGACACGGGCCATCACTTTGTGCCTGCCGATGAGGTaGGGGGACTCGCAGAGCAGCTGGACATCTGACACGGTCACGGTG +
Preference number: 6 (lower is better)
Translates to: SMPPTRAITLCLPMR*GDSQSSWTSDTVTV
Trigger: CACCGTGACCGTGTCAGATGTCCAGCTGCTCTGCGAGTCCCCCAACCTCATCGGCAGGCACAAAGTGATGGCCCGTGTCGGTGGCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp TCCCTCCATGCTTGGCACGGATCTGGGGGTTCTGTATaGGGTCCAGGTGGGTCCCCCATACGGCGATGGGTG +
Preference number: 6 (lower is better)
Translates to: SLHAWHGSGGSV*GPGGSPIRRWV
Trigger: CACCCATCGCCGTATGGGGGACCCACCTGGACCTCATACAGAACCCCCAGATCCGTGCCAAGCATGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp GACTGGTGGTCAGGACCCAGAGCGAGGGCGGGCGCCTaGCAGGTCATCTCAGTAGCGTTCAGAACCTCACAG +
Preference number: 6 (lower is better)
Translates to: DWWSGPRARAGA*QVISVAFRTSQ
Trigger: CTGTGAGGTTCTGAACGCTACTGAGATGACCTGTCAGGCGCCCGCCCTCGCTCTGGGTCCTGACCACCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp TGCCACCGACACGGGCCATCACTTTGTGCCTGCCGATaGGGTTGGGGGACTCGCAGAGCAGCTGGACATCTG +
Preference number: 6 (lower is better)
Translates to: CHRHGPSLCACR*GWGTRRAAGHL
Trigger: CAGATGTCCAGCTGCTCTGCGAGTCCCCCAACCTCATCGGCAGGCACAAAGTGATGGCCCGTGTCGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp GGTCCACCACCTGCACCGTCTCATACTGGAGGGCGTTaGCCCTGGGTCCATCCACCCGGATCTTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: GPPPAPSHTGGR*PWVHPPGSSSA
Trigger: AGCTGAAGAAGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp GGCTCTCCTCGGAATGTGACAAATGACCGCTGCTTCTaGGACAGCGGGGCTGGCTGCCGGGTGAGCAAAGTG +
Preference number: 6 (lower is better)
Translates to: GSPRNVTNDRCF*DSGAGCRVSKV
Trigger: CACTTTGCTCACCCGGCAGCCAGCCCCGCTGTCCCAGAAGCAGCGGTCATTTGTCACATTCCGAGGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp CCACCTGCACCGTCTCATACTGGAGGGCGTTGCCCCTaGGTCCATCCACCCGGATCTTCTTCAGCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: PPAPSHTGGRCP*VHPPGSSSACH
Trigger: GTGGCAAGCTGAAGAAGATCCGGGTGGATGGACCCAGGGGCAACGCCCTCCAGTATGAGACGGTGCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp ACTGCTTCATCTCCGAGGCAAACCTGCGGGGCTCCTTaGACCGCTCACACCGCTCCTTCCGGGTGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: TASSPRQTCGAP*TAHTAPSGCKC
Trigger: ACACTTGCACCCGGAAGGAGCGGTGTGAGCGGTCCAAGGAGCCCCGCAGGTTTGCCTCGGAGATGAAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp CCGACACGGGCCATCACTTTGTGCCTGCCGATGAGGTaGGGGGACTCGCAGAGCAGCTGGACATCTGACACG +
Preference number: 6 (lower is better)
Translates to: PTRAITLCLPMR*GDSQSSWTSDT
Trigger: CGTGTCAGATGTCCAGCTGCTCTGCGAGTCCCCCAACCTCATCGGCAGGCACAAAGTGATGGCCCGTGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp AGAGCAGGTCATCATCTGGATGGACTCCAAGGGTCCTaGCAAGCACGGCCCCCGCTTTGGACAGGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: RAGHHLDGLQGS*QARPPLWTGRQ
Trigger: CTGCCTACCTGTCCAAAGCGGGGGCCGTGCTTGGCAGGACCCTTGGAGTCCATCCAGATGATGACCTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp CATTGCAGGTCTGGACGATGCGGGGTGGGTAACACTTaGGGTTGTCCTCGTCCGGCCCTGTCTCATGCGTCA +
Preference number: 6 (lower is better)
Translates to: HCRSGRCGVGNT*GCPRPALSHAS
Trigger: TGACGCATGAGACAGGGCCGGACGAGGACAACCCCAAGTGTTACCCACCCCGCATCGTCCAGACCTGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp GCCCTTGGAGAAGACGGTGAAGAGCAGGTCATCATCTaGATGGACTCCAAGGGTCCTGCCAAGCACGGCCCC +
Preference number: 6 (lower is better)
Translates to: ALGEDGEEQVII*MDSKGPAKHGP
Trigger: GGGGCCGTGCTTGGCAGGACCCTTGGAGTCCATCCAGATGATGACCTGCTCTTCACCGTCTTCTCCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp CAGCCACGCAGATCTCCACGAAGCCTGCATGCTGGCTaGGCTTGGCCTCCCCCATCTCACACACGATCTGTT +
Preference number: 6 (lower is better)
Translates to: QPRRSPRSLHAG*AWPPPSHTRSV
Trigger: AACAGATCGTGTGTGAGATGGGGGAGGCCAAGCCCAGCCAGCATGCAGGCTTCGTGGAGATCTGCGTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp GGCTGCTTTCCAAACATCACCACCACGTTGCTTCCGGCATTCAGGTaGGTGCCTGTGATGGTCACTTGGGTCCCTCCGGACATGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GCFPNITTTLLPAFR*VPVMVTWVPPDMGP
Trigger: GGGGCCCATGTCCGGAGGGACCCAAGTGACCATCACAGGCACCAACCTGAATGCCGGAAGCAACGTGGTGGTGATGTTTGGAAAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp CCCATTCTCTGTGATGATCCGGGGCACCTCCTTGGCTaGAGGGGAGTAGCACTGGATCTGATTGCCCACGAC +
Preference number: 6 (lower is better)
Translates to: PILCDDPGHLLG*RGVALDLIAHD
Trigger: GTCGTGGGCAATCAGATCCAGTGCTACTCCCCTGCAGCCAAGGAGGTGCCCCGGATCATCACAGAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp TTGGAGAAGACGGTGAAGAGCAGGTCATCATCTGGATaGACTCCAAGGGTCCTGCCAAGCACGGCCCCCGCT +
Preference number: 6 (lower is better)
Translates to: LEKTVKSRSSSG*TPRVLPSTAPA
Trigger: AGCGGGGGCCGTGCTTGGCAGGACCCTTGGAGTCCATCCAGATGATGACCTGCTCTTCACCGTCTTCTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp TTGGCACGGATCTGGGGGTTCTGTATGAGGTCCAGGTaGGTCCCCCATACGGCGATGGGTGTGTTTCCACTG +
Preference number: 6 (lower is better)
Translates to: LARIWGFCMRSR*VPHTAMGVFPL
Trigger: CAGTGGAAACACACCCATCGCCGTATGGGGGACCCACCTGGACCTCATACAGAACCCCCAGATCCGTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp GGCTGGGGGAGGTTCTTGGCCTTCAGCGTGATAGGCTaGATCACCTCCACGGGCACCAGGATCTTGTCCACT +
Preference number: 6 (lower is better)
Translates to: GWGRFLAFSVIG*ITSTGTRILST
Trigger: AGTGGACAAGATCCTGGTGCCCGTGGAGGTGATCAAGCCTATCACGCTGAAGGCCAAGAACCTCCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp CCATCCACTAAAGGGCTGCACTCCACGCCAGCAACCTaGACATGGGAGGCGATGTCGCGAAATTCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: PSTKGLHSTPAT*TWEAMSRNSRP
Trigger: GGGCCTGGAATTTCGCGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGGAGTGCAGCCCTTTAGTGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp CATCCACTAAAGGGCTGCACTCCACGCCAGCAACCTTaGCATGGGAGGCGATGTCGCGAAATTCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: HPLKGCTPRQQP*HGRRCREIPGP
Trigger: TGGGCCTGGAATTTCGCGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGGAGTGCAGCCCTTTAGTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp GGCTCAATCCGCACGATGGTGGGGTCTTCCACATACTaGAAGACCAGGTCCTGGTGGATCTTGGCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: GSIRTMVGSSTY*KTRSWWILALS
Trigger: GGACAGGGCCAAGATCCACCAGGACCTGGTCTTTCAGTATGTGGAAGACCCCACCATCGTGCGGATTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp GATGATGGGCGTGCCAGGCTTGAGCTCCAGGATTCCTaGGGGACCAAAGGCCTCAAACACCGGGTTGGGATA +
Preference number: 6 (lower is better)
Translates to: DDGRARLELQDS*GTKGLKHRVGI
Trigger: TATCCCAACCCGGTGTTTGAGGCCTTTGGTCCCTCAGGAATCCTGGAGCTCAAGCCTGGCACGCCCATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp GAGATATTGTTGGGATGGACCGTCAGCCGGACACACTaGTTCATCTCCGAGGCAAACCTGCGGGGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: EILLGWTVSRTH*FISEANLRGSL
Trigger: CAAGGAGCCCCGCAGGTTTGCCTCGGAGATGAAGCAGTGTGTCCGGCTGACGGTCCATCCCAACAATATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp ACTAAAGGGCTGCACTCCACGCCAGCAACCTTGACATaGGAGGCGATGTCGCGAAATTCCAGGCCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: TKGLHSTPATLT*EAMSRNSRPRF
Trigger: GAACCTGGGCCTGGAATTTCGCGACATCGCCTCCCATGTCAAGGTTGCTGGCGTGGAGTGCAGCCCTTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp CTGGAGAACAGGAGTTCCAGAGTCACTGTTGCTCTGTaGGATCGGGGTCCCGTCTGTAGCTCAAGGGTAGGG +
Preference number: 6 (lower is better)
Translates to: LENRSSRVTVAL*DRGPVCSSRVG
Trigger: CCCTACCCTTGAGCTACAGACGGGACCCCGATCCCACAGAGCAACAGTGACTCTGGAACTCCTGTTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS CAA 72 bp CCAAACATCACCACCACGTTGCTTCCGGCATTCAGGTaGGTGCCTGTGATGGTCACTTGGGTCCCTCCGGAC +
Preference number: 6 (lower is better)
Translates to: PNITTTLLPAFR*VPVMVTWVPPD
Trigger: GTCCGGAGGGACCCAAGTGACCATCACAGGCACCAACCTGAATGCCGGAAGCAACGTGGTGGTGATGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp TCCCTCCACTCCAATCCACTCCTGGGTGATTCCCCCTaGTGGACCTGTGCCGAAGGACTTCTTCAGCTTGCC +
Preference number: 6 (lower is better)
Translates to: SLHSNPLLGDSP*WTCAEGLLQLA
Trigger: GGCAAGCTGAAGAAGTCCTTCGGCACAGGTCCACAAGGGGGAATCACCCAGGAGTGGATTGGAGTGGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CAA 90 bp TCCTCCTTGCAAAGCCTCACGAGCTTGGATGTATACACCTGCTCCTaGGTGGTGGAGCCTGGTGGAGACACCATCTCAGGTTGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: SSLQSLTSLDVYTCS*VVEPGGDTISGWRV
Trigger: GACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTGCAAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CAA 90 bp CGCCTGTGGAAGAGACAGGGCTGCTTTCCAAACATCACCACCACGTaGCTTCCGGCATTCAGGTTGGTGCCTGTGATGGTCACTTGGGTC +
Preference number: 6 (lower is better)
Translates to: RLWKRQGCFPNITTT*LPAFRLVPVMVTWV
Trigger: GACCCAAGTGACCATCACAGGCACCAACCTGAATGCCGGAAGCAACGTGGTGGTGATGTTTGGAAAGCAGCCCTGTCTCTTCCACAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp GCGTTCAGAACCTCACAGATATTGATGTGCTCCTTCCCTCCATGCTaGGCACGGATCTGGGGGTTCTGTATGAGGTCCAGGTGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: AFRTSQILMCSFPPC*ARIWGFCMRSRWVP
Trigger: GGGGACCCACCTGGACCTCATACAGAACCCCCAGATCCGTGCCAAGCATGGAGGGAAGGAGCACATCAATATCTGTGAGGTTCTGAACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp AGGTGGGTCTCCCTCCACTCCAATCCACTCCTGGGTGATTCCCCCTaGTGGACCTGTGCCGAAGGACTTCTTCAGCTTGCCACTTTTGGT +
Preference number: 6 (lower is better)
Translates to: RWVSLHSNPLLGDSP*WTCAEGLLQLATFG
Trigger: ACCAAAAGTGGCAAGCTGAAGAAGTCCTTCGGCACAGGTCCACAAGGGGGAATCACCCAGGAGTGGATTGGAGTGGAGGGAGACCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS TCA 72 bp GCCCATCCATCTCTGACAGGTCCTCAAAGGTGCAGTTaGCGCCAGCTGACAGCTCCGGGACATTGTACGTCT +
Preference number: 6 (lower is better)
Translates to: AHPSLTGPQRCS*RQLTAPGHCTS
Trigger: AGACGTACAATGTCCCGGAGCTGTCAGCTGGCGTCAACTGCACCTTTGAGGACCTGTCAGAGATGGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp CCTCCTCAATCCAGCTCCAGAGGGGAAATACTGGTCTaGTTGGGCTGTGTCCCAAAACGCTGGGCCACGCTA +
Preference number: 6 (lower is better)
Translates to: PPQSSSRGEILV*LGCVPKRWATL
Trigger: TAGCGTGGCCCAGCGTTTTGGGACACAGCCCAATCAGACCAGTATTTCCCCTCTGGAGCTGGATTGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS GCA 72 bp GCCGAATCAGAGCCTGCGGGGCTTGACAGCTTCTCTTaGGGCGTCCAAGGTGGGCGTAATGTCCAACAAAAA +
Preference number: 6 (lower is better)
Translates to: AESEPAGLDSFS*GVQGGRNVQQK
Trigger: TTTTTGTTGGACATTACGCCCACCTTGGACGCCGCAAGAGAAGCTGTCAAGCCCCGCAGGCTCTGATTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359827.7
CDS CCA 72 bp TCACGAGCTTGGATGTATACACCTGCTCCTTGGTGGTaGAGCCTGGTGGAGACACCATCTCAGGTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: SRAWMYTPAPWW*SLVETPSQVGG
Trigger: CCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp GCCTCACGAGCTTGGATGTATACACCTGCTCCTTGGTaGTGGAGCCTGGTGGAGACACCATCTCAGGTTGGA +
Preference number: 6 (lower is better)
Translates to: ASRAWMYTPAPW*WSLVETPSQVG
Trigger: TCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS TCA 72 bp TGCGCTCACAGCCAATGGGCACCTCTACATAGGAGTTaGAGGCTGTGTCCTCCTTGCAAAGCCTCACGAGCT +
Preference number: 6 (lower is better)
Translates to: CAHSQWAPLHRS*RLCPPCKASRA
Trigger: AGCTCGTGAGGCTTTGCAAGGAGGACACAGCCTTCAACTCCTATGTAGAGGTGCCCATTGGCTGTGAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS TCA 72 bp AAAGCTGGTGCTGGCGAAGGTCATGCCGGTCTCCTTTaGTTTGAGCTGAAGCTGTACGACATGGTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: KAGAGEGHAGLL*FELKLYDMVVP
Trigger: GGGGACCACCATGTCGTACAGCTTCAGCTCAAATCAAAGGAGACCGGCATGACCTTCGCCAGCACCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp AGGCCACGAACTCATCATGGAAGACGTACGCGAACATaGCATCCGCCTCAGAGTTCTTGGTCAGTTTCCGGC +
Preference number: 6 (lower is better)
Translates to: RPRTHHGRRTRT*HPPQSSWSVSG
Trigger: GCCGGAAACTGACCAAGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCTTCCATGATGAGTTCGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS GCA 72 bp TCCTTGCAAAGCCTCACGAGCTTGGATGTATACACCTaGTCCTTGGTGGTGGAGCCTGGTGGAGACACCATC +
Preference number: 6 (lower is better)
Translates to: SLQSLTSLDVYT*SLVVEPGGDTI
Trigger: GATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTGCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS GCA 72 bp GCCCACAAAGGCCAGAGAGTGGTTCTTGTAGACATATaGGATGACAGACGTCATGCGGTCCCTGTCCTCCGT +
Preference number: 6 (lower is better)
Translates to: AHKGQRVVLVDI*DDRRHAVPVLR
Trigger: ACGGAGGACAGGGACCGCATGACGTCTGTCATCGCATATGTCTACAAGAACCACTCTCTGGCCTTTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS GCA 72 bp GCACAGTCGTCCCCTCAGAGGGCCAGGACTCAGCAATaGAGTCTCCCCTACTTAAATTCCAAGGTCAGAAGG +
Preference number: 6 (lower is better)
Translates to: AQSSPQRARTQQ*SLPYLNSKVRR
Trigger: CCTTCTGACCTTGGAATTTAAGTAGGGGAGACTGCATTGCTGAGTCCTGGCCCTCTGAGGGGACGACTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CCA 72 bp GATCTTTACTGGGACCTCGGGGCTGTTGGCATTGTCTaGGCTGACACAGCTCAGGACCAGGGTTTTGTAGTC +
Preference number: 6 (lower is better)
Translates to: DLYWDLGAVGIV*ADTAQDQGFVV
Trigger: GACTACAAAACCCTGGTCCTGAGCTGTGTCAGCCCAGACAATGCCAACAGCCCCGAGGTCCCAGTAAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp CAAAGCCTCACGAGCTTGGATGTATACACCTGCTCCTaGGTGGTGGAGCCTGGTGGAGACACCATCTCAGGT +
Preference number: 6 (lower is better)
Translates to: QSLTSLDVYTCS*VVEPGGDTISG
Trigger: ACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CAA 72 bp ATTATCTCTGTGATGCGGGGGTTTGTGCACTTGCTTTaGGCACCAGACAGCTCCAGCCACTGGCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: IISVMRGFVHLL*APDSSSHWLSW
Trigger: CCAGGAGAGCCAGTGGCTGGAGCTGTCTGGTGCCAAAAGCAAGTGCACAAACCCCCGCATCACAGAGATAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp TTGAGGATCTTTACTGGGACCTCGGGGCTGTTGGCATaGTCTGGGCTGACACAGCTCAGGACCAGGGTTTTG +
Preference number: 6 (lower is better)
Translates to: LRIFTGTSGLLA*SGLTQLRTRVL
Trigger: CAAAACCCTGGTCCTGAGCTGTGTCAGCCCAGACAATGCCAACAGCCCCGAGGTCCCAGTAAAGATCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp TGGTGCTGGCGAAGGTCATGCCGGTCTCCTTTGATTTaGGCTGAAGCTGTACGACATGGTGGTCCCCATTCT +
Preference number: 6 (lower is better)
Translates to: WCWRRSCRSPLI*AEAVRHGGPHS
Trigger: AGAATGGGGACCACCATGTCGTACAGCTTCAGCTCAAATCAAAGGAGACCGGCATGACCTTCGCCAGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp TTACTGGGACCTCGGGGCTGTTGGCATTGTCTGGGCTaGCACAGCTCAGGACCAGGGTTTTGTAGTCAATCT +
Preference number: 6 (lower is better)
Translates to: LLGPRGCWHCLG*HSSGPGFCSQS
Trigger: AGATTGACTACAAAACCCTGGTCCTGAGCTGTGTCAGCCCAGACAATGCCAACAGCCCCGAGGTCCCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp CCAGCAGCACGTTGTACTGAGAGACGGAGATATTGTTaGGATGGACCGTCAGCCGGACACACTGCTTCATCT +
Preference number: 6 (lower is better)
Translates to: PAARCTERRRYC*DGPSAGHTASS
Trigger: AGATGAAGCAGTGTGTCCGGCTGACGGTCCATCCCAACAATATCTCCGTCTCTCAGTACAACGTGCTGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp TTGAAGGCTGTGTCCTCCTTGCAAAGCCTCACGAGCTaGGATGTATACACCTGCTCCTTGGTGGTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: LKAVSSLQSLTS*DVYTCSLVVEP
Trigger: AGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAGCTCGTGAGGCTTTGCAAGGAGGACACAGCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CAA 72 bp AAGAGACAGGGCTGCTTTCCAAACATCACCACCACGTaGCTTCCGGCATTCAGGTTGGTGCCTGTGATGGTC +
Preference number: 6 (lower is better)
Translates to: KRQGCFPNITTT*LPAFRLVPVMV
Trigger: GACCATCACAGGCACCAACCTGAATGCCGGAAGCAACGTGGTGGTGATGTTTGGAAAGCAGCCCTGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp ACCTCACAGATATTGATGTGCTCCTTCCCTCCATGCTaGGCACGGATCTGGGGGTTCTGTATGAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TSQILMCSFPPC*ARIWGFCMRSR
Trigger: CCTGGACCTCATACAGAACCCCCAGATCCGTGCCAAGCATGGAGGGAAGGAGCACATCAATATCTGTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp ATGAACAGCTGGAGAACAGGAGTTCCAGAGTCACTGTaGCTCTGTGGGATCGGGGTCCCGTCTGTAGCTCAA +
Preference number: 6 (lower is better)
Translates to: MNSWRTGVPESL*LCGIGVPSVAQ
Trigger: TTGAGCTACAGACGGGACCCCGATCCCACAGAGCAACAGTGACTCTGGAACTCCTGTTCTCCAGCTGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423507.6
CDS CAA 90 bp TCATCATGGAAGACGTACGCGAACATGCCATCCGCCTCAGAGTTCTaGGTCAGTTTCCGGCTGGAGATGGTGGGAAAATACTCGGGCTTC +
Preference number: 6 (lower is better)
Translates to: SSWKTYANMPSASEF*VSFRLEMVGKYSGF
Trigger: GAAGCCCGAGTATTTTCCCACCATCTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCTTCCATGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS TCA 72 bp ACATTGTACGTCTCCAGGACCAGCAGCACGTTGTACTaGGAGACGGAGATATTGTTGGGATGGACCGTCAGC +
Preference number: 6 (lower is better)
Translates to: TLYVSRTSSTLY*ETEILLGWTVS
Trigger: GCTGACGGTCCATCCCAACAATATCTCCGTCTCTCAGTACAACGTGCTGCTGGTCCTGGAGACGTACAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp AGAACCTCACAGATATTGATGTGCTCCTTCCCTCCATaGTTGGCACGGATCTGGGGGTTCTGTATGAGGTCC +
Preference number: 6 (lower is better)
Translates to: RTSQILMCSFPP*LARIWGFCMRS
Trigger: GGACCTCATACAGAACCCCCAGATCCGTGCCAAGCATGGAGGGAAGGAGCACATCAATATCTGTGAGGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS GCA 72 bp CGTGGTCCAGAGGTCCAAGGATCTCCTCGCTGTATTTaGCCACATAGGAGAAGATCTCTGAGAGTGCACTCA +
Preference number: 6 (lower is better)
Translates to: RGPEVQGSPRCI*PHRRRSLRVHS
Trigger: TGAGTGCACTCTCAGAGATCTTCTCCTATGTGGGCAAATACAGCGAGGAGATCCTTGGACCTCTGGACCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp AGACGTACGCGAACATGCCATCCGCCTCAGAGTTCTTaGTCAGTTTCCGGCTGGAGATGGTGGGAAAATACT +
Preference number: 6 (lower is better)
Translates to: RRTRTCHPPQSS*SVSGWRWWENT
Trigger: AGTATTTTCCCACCATCTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp CTTGGATGTATACACCTGCTCCTTGGTGGTGGAGCCTaGTGGAGACACCATCTCAGGTTGGAGGGTCAAAAA +
Preference number: 6 (lower is better)
Translates to: LGCIHLLLGGGA*WRHHLRLEGQK
Trigger: TTTTTGACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTGTATACATCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CCA 72 bp TGGAGTTGTTCACTGCGTTATAGGCTGTCACCTGCTTaGACACTAATGCCACCACGGAACCATCTGGCACCT +
Preference number: 6 (lower is better)
Translates to: WSCSLRYRLSPA*TLMPPRNHLAP
Trigger: AGGTGCCAGATGGTTCCGTGGTGGCATTAGTGTCCAAGCAGGTGACAGCCTATAACGCAGTGAACAACTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp AAGACGTACGCGAACATGCCATCCGCCTCAGAGTTCTaGGTCAGTTTCCGGCTGGAGATGGTGGGAAAATAC +
Preference number: 6 (lower is better)
Translates to: KTYANMPSASEF*VSFRLEMVGKY
Trigger: GTATTTTCCCACCATCTCCAGCCGGAAACTGACCAAGAACTCTGAGGCGGATGGCATGTTCGCGTACGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CAA 72 bp CTTGGTGGTGGAGCCTGGTGGAGACACCATCTCAGGTaGGAGGGTCAAAAAGTAGACAAAGTTGCCACTGCT +
Preference number: 6 (lower is better)
Translates to: LGGGAWWRHHLR*EGQKVDKVATA
Trigger: AGCAGTGGCAACTTTGTCTACTTTTTGACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS CAA 90 bp CACCTGCTCCTTGGTGGTGGAGCCTGGTGGAGACACCATCTCAGGTaGGAGGGTCAAAAAGTAGACAAAGTTGCCACTGCTAAAACCATA +
Preference number: 6 (lower is better)
Translates to: HLLLGGGAWWRHHLR*EGQKVDKVATAKTI
Trigger: TATGGTTTTAGCAGTGGCAACTTTGTCTACTTTTTGACCCTCCAACCTGAGATGGTGTCTCCACCAGGCTCCACCACCAAGGAGCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS GCA 72 bp CAAGACTGCAGCCGCTCCTTAATGCGGTCATTTATCTaGTTCAAGATGAAGATGCACAGGGCCGACTCATCC +
Preference number: 6 (lower is better)
Translates to: QDCSRSLMRSFI*FKMKMHRADSS
Trigger: GGATGAGTCGGCCCTGTGCATCTTCATCTTGAAGCAGATAAATGACCGCATTAAGGAGCGGCTGCAGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS TCA 72 bp GCCCGTGTACCGGATCATGTTTTCATATTTACTTGCTaGGGTCCTGGAGACGGTGGAGTTGTTCACTGCGTT +
Preference number: 6 (lower is better)
Translates to: ARVPDHVFIFTC*GPGDGGVVHCV
Trigger: AACGCAGTGAACAACTCCACCGTCTCCAGGACCTCAGCAAGTAAATATGAAAACATGATCCGGTACACGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS TCA 72 bp AGGAGACGATCACTCCAAAGACTGAGCCGCTCTCGTTaGCACCTGACAGATAGTGCTCCTTCTTATGATAAG +
Preference number: 6 (lower is better)
Translates to: RRRSLQRLSRSR*HLTDSAPSYDK
Trigger: CTTATCATAAGAAGGAGCACTATCTGTCAGGTGTCAACGAGAGCGGCTCAGTCTTTGGAGTGATCGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321063.8
ENST00000359827.7
ENST00000378539.5
ENST00000423507.6
CDS TCA 72 bp CATTCCACACGACTGTCAACTCCACGGGCAGGTTGTTaGTCTCCATCCCTTCATAGGAATAAGAGGTGTTCT +
Preference number: 6 (lower is better)
Translates to: HSTRLSTPRAGC*SPSLHRNKRCS
Trigger: AGAACACCTCTTATTCCTATGAAGGGATGGAGATCAACAACCTGCCCGTGGAGTTGACAGTCGTGTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 90 bp TCAGCAATGCAGTCTCCCCTACTTAAATTCCAAGGTCAGAAGGCTTaGTGTGGATCTGAGGGGTCATGGACATTTGCATTCCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SAMQSPLLKFQGQKA*CGSEGSWTFAFLLL
Trigger: AAGCAGCAGGAATGCAAATGTCCATGACCCCTCAGATCCACACAAAGCCTTCTGACCTTGGAATTTAAGTAGGGGAGACTGCATTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS TCA 72 bp CTCCTCGCTGTATTTGCCCACATAGGAGAAGATCTCTaGGAGTGCACTCATGGTGTTGAACTCATTCATGTG +
Preference number: 6 (lower is better)
Translates to: LLAVFAHIGEDL*ECTHGVELIHV
Trigger: CACATGAATGAGTTCAACACCATGAGTGCACTCTCAGAGATCTTCTCCTATGTGGGCAAATACAGCGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp TGTTTTCATATTTACTTGCTGAGGTCCTGGAGACGGTaGAGTTGTTCACTGCGTTATAGGCTGTCACCTGCT +
Preference number: 6 (lower is better)
Translates to: CFHIYLLRSWRR*SCSLRYRLSPA
Trigger: AGCAGGTGACAGCCTATAACGCAGTGAACAACTCCACCGTCTCCAGGACCTCAGCAAGTAAATATGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CCA 72 bp ACCGGATCATGTTTTCATATTTACTTGCTGAGGTCCTaGAGACGGTGGAGTTGTTCACTGCGTTATAGGCTG +
Preference number: 6 (lower is better)
Translates to: TGSCFHIYLLRS*RRWSCSLRYRL
Trigger: CAGCCTATAACGCAGTGAACAACTCCACCGTCTCCAGGACCTCAGCAAGTAAATATGAAAACATGATCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321063.8
ENST00000359827.7
CDS CAA 72 bp CAGTCTCCCCTACTTAAATTCCAAGGTCAGAAGGCTTaGTGTGGATCTGAGGGGTCATGGACATTTGCATTC +
Preference number: 6 (lower is better)
Translates to: QSPLLKFQGQKA*CGSEGSWTFAF
Trigger: GAATGCAAATGTCCATGACCCCTCAGATCCACACAAAGCCTTCTGACCTTGGAATTTAAGTAGGGGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CAA 90 bp AACAAAGCAGAGGCTGGACTCTCTGATCTGATATTGCTTTGTGACTaGAGCACTGAAGATACACACACAGCATCTGTTCCTGAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: NKAEAGLSDLILLCD*STEDTHTASVPEKQ
Trigger: TTGCTTCTCAGGAACAGATGCTGTGTGTGTATCTTCAGTGCTCAAGTCACAAAGCAATATCAGATCAGAGAGTCCAGCCTCTGCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CAA 72 bp AGCAACAAAGCAGAGGCTGGACTCTCTGATCTGATATaGCTTTGTGACTTGAGCACTGAAGATACACACACA +
Preference number: 6 (lower is better)
Translates to: SNKAEAGLSDLI*LCDLSTEDTHT
Trigger: TGTGTGTGTATCTTCAGTGCTCAAGTCACAAAGCAATATCAGATCAGAGAGTCCAGCCTCTGCTTTGTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS CAA 90 bp CATTTAGGAAGCAACAAAGCAGAGGCTGGACTCTCTGATCTGATATaGCTTTGTGACTTGAGCACTGAAGATACACACACAGCATCTGTT +
Preference number: 6 (lower is better)
Translates to: HLGSNKAEAGLSDLI*LCDLSTEDTHTASV
Trigger: AACAGATGCTGTGTGTGTATCTTCAGTGCTCAAGTCACAAAGCAATATCAGATCAGAGAGTCCAGCCTCTGCTTTGTTGCTTCCTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378539.5
CDS TCA 72 bp AAGGCTGACAACACACTAAATAAGCCTACACAGCTCTaGAGTTTTTCTCAGTTTGATGAACAGCTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: KADNTLNKPTQL*SFSQFDEQLEN
Trigger: GTTCTCCAGCTGTTCATCAAACTGAGAAAAACTTCAGAGCTGTGTAGGCTTATTTAGTGTGTTGTCAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423507.6