RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000114554

Ensembl transcript IDs: ENST00000393409.2, ENST00000393409.3, ENST00000503234.5, ENST00000503363.1, ENST00000505278.1, ENST00000684469.1

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCTGCACTGCGGCGGCCCGAGCACCACCGGACACTCCACACGCATaGGGTGAGGGCTGTCCCGGTCCCTGCTCAGCTGTCCTCACGCTG +
Preference number: 1 (lower is better)
Translates to: RCTAAARAPPDTPHA*GEGCPGPCSAVLTL
Trigger: CAGCGTGAGGACAGCTGAGCAGGGACCGGGACAGCCCTCACCGCATGCGTGTGGAGTGTCCGGTGGTGCTCGGGCCGCCGCAGTGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GGCCCAGTGGCTCCCAGAGGCACAGCCCTGAGGACGGAGAGGGGCTaGCCGGTCCGTCTGGAAGCCACCCAGGAGTCTGAGCAGCCTGGC +
Preference number: 1 (lower is better)
Translates to: GPVAPRGTALRTERG*PVRLEATQESEQPG
Trigger: GCCAGGCTGCTCAGACTCCTGGGTGGCTTCCAGACGGACCGGGCAGCCCCTCTCCGTCCTCAGGGCTGTGCCTCTGGGAGCCACTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp CCATGGGAGCCGCTCACCGCTGCTGGGCACAGAACGGCCTCCAACTaGAGCTCCTACCAGGGCCTCCAGCCCCAGGCCAGAGCTCCCAGG +
Preference number: 1 (lower is better)
Translates to: PWEPLTAAGHRTASN*SSYQGLQPQARAPR
Trigger: CCTGGGAGCTCTGGCCTGGGGCTGGAGGCCCTGGTAGGAGCTGCAGTTGGAGGCCGTTCTGTGCCCAGCAGCGGTGAGCGGCTCCCATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GCCAGGCGCGGGGAGAGGGAGGACACGGAGCAGGGTAGGAGGTGCTaGAGGAAGCAAGTGGCGGCAGCAGCACGCCAGGTGGGTGCCAGT +
Preference number: 1 (lower is better)
Translates to: ARRGEREDTEQGRRC*RKQVAAAARQVGAS
Trigger: ACTGGCACCCACCTGGCGTGCTGCTGCCGCCACTTGCTTCCTGCAGCACCTCCTACCCTGCTCCGTGTCCTCCCTCTCCCCGCGCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp CACTGCGGCGGCCCGAGCACCACCGGACACTCCACACGCATGCGGTaGGGGCTGTCCCGGTCCCTGCTCAGCTGTCCTCACGCTGCATCA +
Preference number: 1 (lower is better)
Translates to: HCGGPSTTGHSTRMR*GLSRSLLSCPHAAS
Trigger: TGATGCAGCGTGAGGACAGCTGAGCAGGGACCGGGACAGCCCTCACCGCATGCGTGTGGAGTGTCCGGTGGTGCTCGGGCCGCCGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp AGAGGCCAGGCTCCCAGGCCGAGGCGTGAGCTTTTCCAGCACTCCTaGGCCAGGCGCGGGGAGAGGGAGGACACGGAGCAGGGTAGGAGG +
Preference number: 1 (lower is better)
Translates to: RGQAPRPRRELFQHS*ARRGEREDTEQGRR
Trigger: CCTCCTACCCTGCTCCGTGTCCTCCCTCTCCCCGCGCCTGGCTCAGGAGTGCTGGAAAAGCTCACGCCTCGGCCTGGGAGCCTGGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp GATGGCAGCGGTGCAGCGGGCATGGGTGCTGGAGGTGGGAGTCGGTaGCAACGGGCCCAGACCGACTTGAGCTCCTCTTGCCCGGCTACG +
Preference number: 1 (lower is better)
Translates to: DGSGAAGMGAGGGSR*QRAQTDLSSSCPAT
Trigger: CGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACCTCCAGCACCCATGCCCGCTGCACCGCTGCCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GCCTCTTTCTCCAGCTGCCAACCGGGCCCCGGGACCCTCAGACTCTaGCGCCTGGGGGCAGCTTGGAAAGCTGGGAATGCTGACACCCCC +
Preference number: 1 (lower is better)
Translates to: ASFSSCQPGPGTLRL*RLGAAWKAGNADTP
Trigger: GGGGGTGTCAGCATTCCCAGCTTTCCAAGCTGCCCCCAGGCGGCAGAGTCTGAGGGTCCCGGGGCCCGGTTGGCAGCTGGAGAAAGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GGTGGGTGCCAGTTTCACAGCACATGTGCCGCAGCCCTGGCTCCCTaGAGACACAGGGCCCATGGGAGCCGCTCACCGCTGCTGGGCACA +
Preference number: 1 (lower is better)
Translates to: GGCQFHSTCAAALAP*RHRAHGSRSPLLGT
Trigger: TGTGCCCAGCAGCGGTGAGCGGCTCCCATGGGCCCTGTGTCTGCAGGGAGCCAGGGCTGCGGCACATGTGCTGTGAAACTGGCACCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp TGGAGAGAGAGGAGTGCTCAGGGGCCGCCCTCAGGGGCTCCAGGGTaGGGAGCTCAGCCTACCCTTGAAGACAGCTGCCAGGGCAGCCTG +
Preference number: 1 (lower is better)
Translates to: WRERSAQGPPSGAPG*GAQPTLEDSCQGSL
Trigger: CAGGCTGCCCTGGCAGCTGTCTTCAAGGGTAGGCTGAGCTCCCCACCCTGGAGCCCCTGAGGGCGGCCCCTGAGCACTCCTCTCTCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp GCTGTCCCGGCCCCTGAGCAAGCAGCTGTGTGCGCAGCTGTGGTGTaGCAGGTACCATCACCTCCACACAGGAAGAGCCGGGACCCGACC +
Preference number: 1 (lower is better)
Translates to: AVPAPEQAAVCAAVV*QVPSPPHRKSRDPT
Trigger: GGTCGGGTCCCGGCTCTTCCTGTGTGGAGGTGATGGTACCTGCCACACCACAGCTGCGCACACAGCTGCTTGCTCAGGGGCCGGGACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp CAGCCCTTCTCCCATGAAGGCCACTGGGCAGCTCTTGCCAGGCAATaGAGGTCCTTGGCCAGCCTGAGCACCCAGTGCTGTCCCGGCCCC +
Preference number: 1 (lower is better)
Translates to: QPFSHEGHWAALARQ*RSLASLSTQCCPGP
Trigger: GGGGCCGGGACAGCACTGGGTGCTCAGGCTGGCCAAGGACCTTCATTGCCTGGCAAGAGCTGCCCAGTGGCCTTCATGGGAGAAGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GAGGTGCTGCAGGAAGCAAGTGGCGGCAGCAGCACGCCAGGTGGGTaGCAGTTTCACAGCACATGTGCCGCAGCCCTGGCTCCCTGCAGA +
Preference number: 1 (lower is better)
Translates to: EVLQEASGGSSTPGG*QFHSTCAAALAPCR
Trigger: TCTGCAGGGAGCCAGGGCTGCGGCACATGTGCTGTGAAACTGGCACCCACCTGGCGTGCTGCTGCCGCCACTTGCTTCCTGCAGCACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp CCAGTGCTGTCCCGGCCCCTGAGCAAGCAGCTGTGTGCGCAGCTGTaGTGTGGCAGGTACCATCACCTCCACACAGGAAGAGCCGGGACC +
Preference number: 1 (lower is better)
Translates to: PVLSRPLSKQLCAQL*CGRYHHLHTGRAGT
Trigger: GGTCCCGGCTCTTCCTGTGTGGAGGTGATGGTACCTGCCACACCACAGCTGCGCACACAGCTGCTTGCTCAGGGGCCGGGACAGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp GAAGAGGCGGGTCTCTGTGGCGTCATCTGGCTCACGCTACTCAGCTaGGGCGGACTGCAAGACTGGCACACCCCATGGGGCCGAGTCCTC +
Preference number: 1 (lower is better)
Translates to: EEAGLCGVIWLTLLS*GGLQDWHTPWGRVL
Trigger: GAGGACTCGGCCCCATGGGGTGTGCCAGTCTTGCAGTCCGCCCCAGCTGAGTAGCGTGAGCCAGATGACGCCACAGAGACCCGCCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp CACCGACCCGCGTTCAGGGAAGAGGCGGGTCTCTGTGGCGTCATCTaGCTCACGCTACTCAGCTGGGGCGGACTGCAAGACTGGCACACC +
Preference number: 1 (lower is better)
Translates to: HRPAFREEAGLCGVI*LTLLSWGGLQDWHT
Trigger: GGTGTGCCAGTCTTGCAGTCCGCCCCAGCTGAGTAGCGTGAGCCAGATGACGCCACAGAGACCCGCCTCTTCCCTGAACGCGGGTCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp GGAAGCTCGAGGTATATCAAGAGGCCAGGCTCCCAGGCCGAGGCGTaGGCTTTTCCAGCACTCCTGAGCCAGGCGCGGGGAGAGGGAGGA +
Preference number: 1 (lower is better)
Translates to: GSSRYIKRPGSQAEA*AFPALLSQARGEGG
Trigger: TCCTCCCTCTCCCCGCGCCTGGCTCAGGAGTGCTGGAAAAGCTCACGCCTCGGCCTGGGAGCCTGGCCTCTTGATATACCTCGAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GGTGGGAGTCGGTGGCAACGGGCCCAGACCGACTTGAGCTCCTCTTaGCCGGCTACGGGCTTTTTGCCTCTTTCTCCAGCTGCCAACCGG +
Preference number: 1 (lower is better)
Translates to: GGSRWQRAQTDLSSS*PATGFLPLSPAANR
Trigger: CCGGTTGGCAGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GTGCTCTGTGGTGGCCACGCCCCAGCCACACGCCCATGTGGGAACTaGTTCATGAGGCCTGTGGTGCACCCCCTTCATCACCACTGCCGT +
Preference number: 1 (lower is better)
Translates to: VLCGGHAPATRPCGN*FMRPVVHPLHHHCR
Trigger: ACGGCAGTGGTGATGAAGGGGGTGCACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCCACCACAGAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp TCTGGAGGGGCCAGGACACTGCTGAGATGCCACACTGGAAGCCGCTaGGGCAGGGACAGAGAGAGTGGAGAGAGAGGAGTGCTCAGGGGC +
Preference number: 1 (lower is better)
Translates to: SGGARTLLRCHTGSR*GRDRESGERGVLRG
Trigger: GCCCCTGAGCACTCCTCTCTCTCCACTCTCTCTGTCCCTGCCCCAGCGGCTTCCAGTGTGGCATCTCAGCAGTGTCCTGGCCCCTCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp TGGGTGCTGGAGGTGGGAGTCGGTGGCAACGGGCCCAGACCGACTTaGGCTCCTCTTGCCCGGCTACGGGCTTTTTGCCTCTTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: WVLEVGVGGNGPRPT*APLARLRAFCLFLQ
Trigger: CTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACCTCCAGCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp TCTGGTCACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTaGGGGCCAGAGGAGCCCTGCCACAGACCTCAAGGCCCAAGCAGA +
Preference number: 1 (lower is better)
Translates to: SGHCPSLMAQIDPGH*GPEEPCHRPQGPSR
Trigger: TCTGCTTGGGCCTTGAGGTCTGTGGCAGGGCTCCTCTGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTGACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp CTCTTGCTGAGGGCAAGGGTGGACACCGCTGGCCTCCAGTCCCTCTaGTCACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTG +
Preference number: 1 (lower is better)
Translates to: LLLRARVDTAGLQSL*SLPVTHGPDRSRPL
Trigger: CAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTGACCAGAGGGACTGGAGGCCAGCGGTGTCCACCCTTGCCCTCAGCAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp ACTGACTCCACACCGACCCGCGTTCAGGGAAGAGGCGGGTCTCTGTaGCGTCATCTGGCTCACGCTACTCAGCTGGGGCGGACTGCAAGA +
Preference number: 1 (lower is better)
Translates to: TDSTPTRVQGRGGSL*RHLAHATQLGRTAR
Trigger: TCTTGCAGTCCGCCCCAGCTGAGTAGCGTGAGCCAGATGACGCCACAGAGACCCGCCTCTTCCCTGAACGCGGGTCGGTGTGGAGTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp CAGCCATGTGCTCTGTGGTGGCCACGCCCCAGCCACACGCCCATGTaGGAACTGCTTCATGAGGCCTGTGGTGCACCCCCTTCATCACCA +
Preference number: 1 (lower is better)
Translates to: QPCALWWPRPSHTPM*ELLHEACGAPPSSP
Trigger: TGGTGATGAAGGGGGTGCACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCCACCACAGAGCACATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GGGAACTGCTTCATGAGGCCTGTGGTGCACCCCCTTCATCACCACTaGCGTCCCCACCACCCGCCCATGCTACTCACATGGACAAGGGCA +
Preference number: 1 (lower is better)
Translates to: GNCFMRPVVHPLHHH*RPHHPPMLLTWTRA
Trigger: TGCCCTTGTCCATGTGAGTAGCATGGGCGGGTGGTGGGGACGGCAGTGGTGATGAAGGGGGTGCACCACAGGCCTCATGAAGCAGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp AGCCCCAGGCCAGAGCTCCCAGGTGCTGCACAGTTAGGAGCACAGTaGGAACCAGTGACAAGTAGGGACTGGGGCCTAACTCCACGACCT +
Preference number: 1 (lower is better)
Translates to: SPRPELPGAAQLGAQ*EPVTSRDWGLTPRP
Trigger: AGGTCGTGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTGTGCAGCACCTGGGAGCTCTGGCCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp CTGAGGTTCCCACCCCACCATAGCCAGGAAACATCAGAAGGGAGGTaGAGGCGCACCCAGGAACAGGAATCCCAGCCAATGCTAGGGGCT +
Preference number: 1 (lower is better)
Translates to: LRFPPHHSQETSEGR*RRTQEQESQPMLGA
Trigger: AGCCCCTAGCATTGGCTGGGATTCCTGTTCCTGGGTGCGCCTCCACCTCCCTTCTGATGTTTCCTGGCTATGGTGGGGTGGGAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp CCTGGCAGGGCAGAGCAGAGCACAAGGCCTAAGGAGAGTGGGGGTTaGAACTGGATTCTGAAGGTGATGCAGGAGCCCCTACCTAACCCG +
Preference number: 1 (lower is better)
Translates to: PGRAEQSTRPKESGG*NWILKVMQEPLPNP
Trigger: CGGGTTAGGTAGGGGCTCCTGCATCACCTTCAGAATCCAGTTCCAACCCCCACTCTCCTTAGGCCTTGTGCTCTGCTCTGCCCTGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp GCTGCACAGTTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTaGGGCCTAACTCCACGACCTGGCAGAGGGAGGTACGGAGTAGCT +
Preference number: 1 (lower is better)
Translates to: AAQLGAQWEPVTSRD*GLTPRPGRGRYGVA
Trigger: AGCTACTCCGTACCTCCCTCTGCCAGGTCGTGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GATCAACTCAGACTAAACGCTAGCACAATCATGCATGCCCCGTGGTaGCGCGGCACCCCAGAGGCTCTCAGGGTCAGCAGGAAGTCCTTT +
Preference number: 1 (lower is better)
Translates to: DQLRLNASTIMHAPW*RGTPEALRVSRKSF
Trigger: AAAGGACTTCCTGCTGACCCTGAGAGCCTCTGGGGTGCCGCGGCACCACGGGGCATGCATGATTGTGCTAGCGTTTAGTCTGAGTTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 90 bp AAAGATCAACTCAGACTAAACGCTAGCACAATCATGCATGCCCCGTaGTGCCGCGGCACCCCAGAGGCTCTCAGGGTCAGCAGGAAGTCC +
Preference number: 1 (lower is better)
Translates to: KDQLRLNASTIMHAP*CRGTPEALRVSRKS
Trigger: GGACTTCCTGCTGACCCTGAGAGCCTCTGGGGTGCCGCGGCACCACGGGGCATGCATGATTGTGCTAGCGTTTAGTCTGAGTTGATCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp TGTAAACAGATACTGCTAAAGTGCTTGCGCCTAGACACAGCCATGTaGTCTGTGGTGGCCACGCCCCAGCCACACGCCCATGTGGGAACT +
Preference number: 1 (lower is better)
Translates to: CKQILLKCLRLDTAM*SVVATPQPHAHVGT
Trigger: AGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCCACCACAGAGCACATGGCTGTGTCTAGGCGCAAGCACTTTAGCAGTATCTGTTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp CCCTACCTAACCCGTGAGGAACTGGAAGAACCAGGGACTTCAACCTaGAGCCAGCATCCAGGGAAGACTTTGGGGGAAACTGAGGTTCCC +
Preference number: 1 (lower is better)
Translates to: PYLTREELEEPGTST*SQHPGKTLGETEVP
Trigger: GGGAACCTCAGTTTCCCCCAAAGTCTTCCCTGGATGCTGGCTTCAGGTTGAAGTCCCTGGTTCTTCCAGTTCCTCACGGGTTAGGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GGTAGTCGGCTTGATCCTTGCGCATGTAAACAGATACTGCTAAAGTaGTTGCGCCTAGACACAGCCATGTGCTCTGTGGTGGCCACGCCC +
Preference number: 1 (lower is better)
Translates to: GSRLDPCACKQILLK*LRLDTAMCSVVATP
Trigger: GGGCGTGGCCACCACAGAGCACATGGCTGTGTCTAGGCGCAAGCACTTTAGCAGTATCTGTTTACATGCGCAAGGATCAAGCCGACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp GACTTCAACCTGAAGCCAGCATCCAGGGAAGACTTTGGGGGAAACTaGGGTTCCCACCCCACCATAGCCAGGAAACATCAGAAGGGAGGT +
Preference number: 1 (lower is better)
Translates to: DFNLKPASREDFGGN*GSHPTIARKHQKGG
Trigger: ACCTCCCTTCTGATGTTTCCTGGCTATGGTGGGGTGGGAACCTCAGTTTCCCCCAAAGTCTTCCCTGGATGCTGGCTTCAGGTTGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp TGGAACTGGATTCTGAAGGTGATGCAGGAGCCCCTACCTAACCCGTaGGGAACTGGAAGAACCAGGGACTTCAACCTGAAGCCAGCATCC +
Preference number: 1 (lower is better)
Translates to: WNWILKVMQEPLPNP*GTGRTRDFNLKPAS
Trigger: GGATGCTGGCTTCAGGTTGAAGTCCCTGGTTCTTCCAGTTCCTCACGGGTTAGGTAGGGGCTCCTGCATCACCTTCAGAATCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp GAGACTGCTGTCCCAGTAGACAGCACAGGTAGTCGGCTTGATCCTTaGGCATGTAAACAGATACTGCTAAAGTGCTTGCGCCTAGACACA +
Preference number: 1 (lower is better)
Translates to: ETAVPVDSTGSRLDP*ACKQILLKCLRLDT
Trigger: TGTGTCTAGGCGCAAGCACTTTAGCAGTATCTGTTTACATGCGCAAGGATCAAGCCGACTACCTGTGCTGTCTACTGGGACAGCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 90 bp ATCTCTCTCTCTAAATATATCTATTCTAGCTGTGTAGCACCAACGTaGGCCACTGAATCCAGACAGGGAGAAAGCCAGGGCGGAGGCTCT +
Preference number: 1 (lower is better)
Translates to: ISLSKYIYSSCVAPT*ATESRQGESQGGGS
Trigger: AGAGCCTCCGCCCTGGCTTTCTCCCTGTCTGGATTCAGTGGCTCACGTTGGTGCTACACAGCTAGAATAGATATATTTAGAGAGAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 90 bp CACTCCAGGGAGGCTCCGGCCACTTTCTCCACAACCATTTGGCATTaGTTTCCCACTGCCTTCATTTTCTTGTTCAAATCGTCTTTAAAA +
Preference number: 1 (lower is better)
Translates to: HSREAPATFSTTIWH*FPTAFIFLFKSSLK
Trigger: TTTTAAAGACGATTTGAACAAGAAAATGAAGGCAGTGGGAAAGCAATGCCAAATGGTTGTGGAGAAAGTGGCCGGAGCCTCCCTGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR TCA 90 bp TCTGGCCCCCAAGACTGCCCAGGGAGTAAGCCCACCCCCTCAGTGGGCTGGGGGTCCACACGCATGCGGTaGGGGCTGTCCCGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: SGPQDCPGSKPTPSVGWGSTRMR*GLSRSL
Trigger: CAGGGACCGGGACAGCCCTCACCGCATGCGTGTGGA...CCCCCAGCCCACTGAGGGGGTGGGCTTACTCCCTGGGCAGTCTTGGGGGCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR TCA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCGGTCCTTGGCCAGCCTaGGCACCCAGTGCTGTCCCG +
Preference number: 2 (lower is better)
Translates to: GESQGGGSQQGRAEMARRGPWPA*APSAVP
Trigger: CGGGACAGCACTGGGTGCTCAGGCTGGCCAAGGACC...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCGGGCCAGAGGAGCCCTaGCACAGACCTCAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GESQGGGSQQGRAEMARRGPEEP*HRPQGP
Trigger: TGGGCCTTGAGGTCTGTGGCAGGGCTCCTCTGGCCC...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCGGCGGACTGCAAGACTaGCACACCCCATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: GESQGGGSQQGRAEMARRGGLQD*HTPWGR
Trigger: TCGGCCCCATGGGGTGTGCCAGTCTTGCAGTCCGCC...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTGCGGGCCAGAGGAGGCGAGGTGGATGTGGTaGTCCGGCCTCGGCCGCGCA +
Preference number: 2 (lower is better)
Translates to: HCPSLMAQIDPGHCGPEEARWMW*SGLGRA
Trigger: TGCGCGGCCGAGGCCGGAGCACCACATCCACCTCGC...CTCCTCTGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp TTCTCTCTTGCTGAGGGCAAGGGTGGACACCGCTGGCCTCCAGTCCCTCTGGTCCGGGAACGTGCTCTCTaGGACCCGGGGCCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: FSLAEGKGGHRWPPVPLVRERAL*DPGPLA
Trigger: GGCCAGGGGCCCCGGGTCGCAGAGAGCACGTTCCCG...GACCAGAGGGACTGGAGGCCAGCGGTGTCCACCCTTGCCCTCAGCAAGAGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGCCACGCCCCAGCCACACGCCCATGTGGGAACTGCTTCATGAGGCCTGTGGTGATGCATGCCCCGTGGTaGCGCGGCACCCCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: GHAPATRPCGNCFMRPVVMHAPW*RGTPEA
Trigger: AGCCTCTGGGGTGCCGCGGCACCACGGGGCATGCAT...CACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp TCTGGCCCCCAAGACTGCCCAGGGAGTAAGCCCACCCCCTCAGTGGGCTGGGGGTCAGGGGCTCCAGGGTaGGGAGCTCAGCCTACCCTT +
Preference number: 2 (lower is better)
Translates to: SGPQDCPGSKPTPSVGWGSGAPG*GAQPTL
Trigger: AAGGGTAGGCTGAGCTCCCCACCCTGGAGCCCCTGA...CCCCCAGCCCACTGAGGGGGTGGGCTTACTCCCTGGGCAGTCTTGGGGGCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 90 bp CGGGCCCAGACCGACTTGAGCTCCTCTTGCCCGGCTACGGGCTTTTaGCCTCTTTCTCCAGCTGCCAACCGGGCCCCGGGACCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: RAQTDLSSSCPATGF*PLSPAANRAPGPSD
Trigger: GTCTGAGGGTCCCGGGGCCCGGTTGGCAGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GAGAGGGAGGACACGGAGCAGGGTAGGAGGTGCTGCAGGAAGCAAGTGGCGGCAAGGACGGAGAGGGGCTaGCCGGTCCGTCTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: EREDTEQGRRCCRKQVAARTERG*PVRLEA
Trigger: GGCTTCCAGACGGACCGGGCAGCCCCTCTCCGTCCT...TGCCGCCACTTGCTTCCTGCAGCACCTCCTACCCTGCTCCGTGTCCTCCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp TCTGGCCCCCAAGACTGCCCAGGGAGTAAGCCCACCCCCTCAGTGGGCTGGGGGGGCCTCCAGTCCCTCTaGTCACTGCCCGTCACTCAT +
Preference number: 2 (lower is better)
Translates to: SGPQDCPGSKPTPSVGWGGLQSL*SLPVTH
Trigger: ATGAGTGACGGGCAGTGACCAGAGGGACTGGAGGCC...CCCCCAGCCCACTGAGGGGGTGGGCTTACTCCCTGGGCAGTCTTGGGGGCCAGA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp TCTGGCCCCCAAGACTGCCCAGGGAGTAAGCCCACCCCCTCAGTGGGCTGGGGGAGAGGCGGGTCTCTGTaGCGTCATCTGGCTCACGCT +
Preference number: 2 (lower is better)
Translates to: SGPQDCPGSKPTPSVGWGRGGSL*RHLAHA
Trigger: AGCGTGAGCCAGATGACGCCACAGAGACCCGCCTCT...CCCCCAGCCCACTGAGGGGGTGGGCTTACTCCCTGGGCAGTCTTGGGGGCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp TCTGGCCCCCAAGACTGCCCAGGGAGTAAGCCCACCCCCTCAGTGGGCTGGGGGCTGTGTGCGCAGCTGTaGTGTGGCAGGTACCATCAC +
Preference number: 2 (lower is better)
Translates to: SGPQDCPGSKPTPSVGWGLCAQL*CGRYHH
Trigger: GTGATGGTACCTGCCACACCACAGCTGCGCACACAG...CCCCCAGCCCACTGAGGGGGTGGGCTTACTCCCTGGGCAGTCTTGGGGGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp CACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTGCGGGCCAGAGGAGCATGGGTGCTGGAGGTaGGAGTCGGTGGCAACGGGC +
Preference number: 2 (lower is better)
Translates to: HCPSLMAQIDPGHCGPEEHGCWR*ESVATG
Trigger: GCCCGTTGCCACCGACTCCCACCTCCAGCACCCATG...CTCCTCTGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp CACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTGCGGGCCAGAGGAGAGCGGGCATGGGTGCTaGAGGTGGGAGTCGGTGGCA +
Preference number: 2 (lower is better)
Translates to: HCPSLMAQIDPGHCGPEESGHGC*RWESVA
Trigger: TGCCACCGACTCCCACCTCCAGCACCCATGCCCGCT...CTCCTCTGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GGCCACGCCCCAGCCACACGCCCATGTGGGAACTGCTTCATGAGGCCTGTGGTGGGAGCAGAGCCTCTCTaGGGCGAGGTGGATGTGGTG +
Preference number: 2 (lower is better)
Translates to: GHAPATRPCGNCFMRPVVGAEPL*GEVDVV
Trigger: CACCACATCCACCTCGCCCCAGAGAGGCTCTGCTCC...CACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCACATCAGAAGGGAGGTaGAGGCGCACCCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: GESQGGGSQQGRAEMARRTSEGR*RRTQEQ
Trigger: CTGTTCCTGGGTGCGCCTCCACCTCCCTTCTGATGT...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GAGAGGGAGGACACGGAGCAGGGTAGGAGGTGCTGCAGGAAGCAAGTGGCGGCACAGCCATGTGCTCTGTaGTGGCCACGCCCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: EREDTEQGRRCCRKQVAAQPCAL*WPRPSH
Trigger: GTGGCTGGGGCGTGGCCACCACAGAGCACATGGCTG...TGCCGCCACTTGCTTCCTGCAGCACCTCCTACCCTGCTCCGTGTCCTCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCCGGCTACGGGCTTTTTaGCTCTTTCTCCAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GESQGGGSQQGRAEMARRRLRAF*LFLQLP
Trigger: TGGCAGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCG...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCGACTTGAGCTCCTCTTaGCCGGCTACGGGCTTTTTG +
Preference number: 2 (lower is better)
Translates to: GESQGGGSQQGRAEMARRDLSSS*PATGFL
Trigger: CAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTC...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GGCCACGCCCCAGCCACACGCCCATGTGGGAACTGCTTCATGAGGCCTGTGGTGCCCAGCCTCTTGTCCTaGTCTCAAGGGGACAGCCCA +
Preference number: 2 (lower is better)
Translates to: GHAPATRPCGNCFMRPVVPSLLS*SQGDSP
Trigger: TGGGCTGTCCCCTTGAGACCAGGACAAGAGGCTGGG...CACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GCAGAGCACGCGGTGAATCTGAGGATGGCAGCGGTGCAGCGGGCATGGGTGCTGTCAGACTCTGCCGCCTaGGGGCAGCTTGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: AEHAVNLRMAAVQRAWVLSDSAA*GQLGKL
Trigger: CAGCTTTCCAAGCTGCCCCCAGGCGGCAGAGTCTGA...CAGCACCCATGCCCGCTGCACCGCTGCCATCCTCAGATTCACCGCGTGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GGCCTCCAGTCCCTCTGGTCACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCTCTCTGGGGCGAGGTaGATGTGGTGCTCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: GLQSLWSLPVTHGPDRSRLSGAR*MWCSGL
Trigger: GAGGCCGGAGCACCACATCCACCTCGCCCCAGAGAG...CCTGGATCTATCTGGGCCATGAGTGACGGGCAGTGACCAGAGGGACTGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GAGAGGGAGGACACGGAGCAGGGTAGGAGGTGCTGCAGGAAGCAAGTGGCGGCAGCCGAGTCCTCTCCTTaGGCCTGGCCAAGGACATGG +
Preference number: 2 (lower is better)
Translates to: EREDTEQGRRCCRKQVAAAESSP*AWPRTW
Trigger: CCATGTCCTTGGCCAGGCCCAAGGAGAGGACTCGGC...TGCCGCCACTTGCTTCCTGCAGCACCTCCTACCCTGCTCCGTGTCCTCCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 90 bp AGGTGGGAGTCGGTGGCAACGGGCCCAGACCGACTTGAGCTCCTCTaGCCCGGCTACGGGCTTTTTGCCTCTTTCTCCAGCTGCCAACCG +
Preference number: 2 (lower is better)
Translates to: RWESVATGPDRLELL*PGYGLFASFSSCQP
Trigger: CGGTTGGCAGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR TCA 90 bp TTCTCTCTTGCTGAGGGCAAGGGTGGACACCGCTGGCCTCCAGTCCCTCTGGTCGGGCCAGGACACTGCTaGGATGCCACACTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: FSLAEGKGGHRWPPVPLVGPGHC*DATLEA
Trigger: GGCTTCCAGTGTGGCATCTCAGCAGTGTCCTGGCCC...GACCAGAGGGACTGGAGGCCAGCGGTGTCCACCCTTGCCCTCAGCAAGAGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR TCA 90 bp GGCCACGCCCCAGCCACACGCCCATGTGGGAACTGCTTCATGAGGCCTGTGGTGCCAAGGACATGGGGCTaGGTCTGGCCACAGTTAGCT +
Preference number: 2 (lower is better)
Translates to: GHAPATRPCGNCFMRPVVPRTWG*VWPQLA
Trigger: AGCTAACTGTGGCCAGACTCAGCCCCATGTCCTTGG...CACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CAGTTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTGGGGCCTAACTCCAGGGCAGTCGCTGCACTaGGGCGGCCCGAGCACCACC +
Preference number: 2 (lower is better)
Translates to: QLGAQWEPVTSRDWGLTPGQSLH*GGPSTT
Trigger: GGTGGTGCTCGGGCCGCCGCAGTGCAGCGACTGCCC...TGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CAACTCAGACTAAACGCTAGCACAATCATGCATGCCCCGTGGTGCCGCGGCACCGCCTCTTTCTCCAGCTaGCAACCGGGCCCCGGGACC +
Preference number: 2 (lower is better)
Translates to: QLRLNASTIMHAPWCRGTASFSS*QPGPGT
Trigger: GGTCCCGGGGCCCGGTTGGCAGCTGGAGAAAGAGGC...GGTGCCGCGGCACCACGGGGCATGCATGATTGTGCTAGCGTTTAGTCTGAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGCCACGCCCCAGCCACACGCCCATGTGGGAACTGCTTCATGAGGCCTGTGGTGACCCTTGAAGACAGCTaGCAGGGCAGCCTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: GHAPATRPCGNCFMRPVVTLEDS*QGSLCR
Trigger: CCTACACAGGCTGCCCTGGCAGCTGTCTTCAAGGGT...CACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp CACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTGCGGGCCAGAGGAGCGCCTGGGGGCAGCTTaGAAAGCTGGGAATGCTGAC +
Preference number: 2 (lower is better)
Translates to: HCPSLMAQIDPGHCGPEERLGAA*KAGNAD
Trigger: GTCAGCATTCCCAGCTTTCCAAGCTGCCCCCAGGCG...CTCCTCTGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 90 bp ATGGGTGCTGGAGGTGGGAGTCGGTGGCAACGGGCCCAGACCGACTaGAGCTCCTCTTGCCCGGCTACGGGCTTTTTGCCTCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: MGAGGGSRWQRAQTD*SSSCPATGFLPLSP
Trigger: TGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACCTCCAGCACCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGCAGCCTGTGTAGGACGCGGAGGGGAATAAATAACGGGAACGTGCTCTCTGCGGGCTGTCCCGGTCCCTaGTCAGCTGTCCTCACGCTG +
Preference number: 2 (lower is better)
Translates to: GSLCRTRRGINNGNVLSAGCPGP*SAVLTL
Trigger: CAGCGTGAGGACAGCTGAGCAGGGACCGGGACAGCC...CGCAGAGAGCACGTTCCCGTTATTTATTCCCCTCCGCGTCCTACACAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CAACTCAGACTAAACGCTAGCACAATCATGCATGCCCCGTGGTGCCGCGGCACCTGCAGCGGGCATGGGTaGTGGAGGTGGGAGTCGGTG +
Preference number: 2 (lower is better)
Translates to: QLRLNASTIMHAPWCRGTCSGHG*WRWESV
Trigger: CACCGACTCCCACCTCCAGCACCCATGCCCGCTGCA...GGTGCCGCGGCACCACGGGGCATGCATGATTGTGCTAGCGTTTAGTCTGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTGCGGGCCAGAGGAGAGGACACTGCTGAGATaGCACACTGGAAGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: HCPSLMAQIDPGHCGPEERTLLR*HTGSRW
Trigger: CCAGCGGCTTCCAGTGTGGCATCTCAGCAGTGTCCT...CTCCTCTGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCCAGATACTGCTAAAGTaGTTGCGCCTAGACACAGCC +
Preference number: 2 (lower is better)
Translates to: GESQGGGSQQGRAEMARRQILLK*LRLDTA
Trigger: GGCTGTGTCTAGGCGCAAGCACTTTAGCAGTATCTG...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GGCAGCCTGTGTAGGACGCGGAGGGGAATAAATAACGGGAACGTGCTCTCTGCGGCTGCCCGGTCCGTCTaGAAGCCACCCAGGAGTCTG +
Preference number: 2 (lower is better)
Translates to: GSLCRTRRGINNGNVLSAAARSV*KPPRSL
Trigger: CAGACTCCTGGGTGGCTTCCAGACGGACCGGGCAGC...CGCAGAGAGCACGTTCCCGTTATTTATTCCCCTCCGCGTCCTACACAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp GGCCTCCAGTCCCTCTGGTCACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCACACTGGAAGCCGCTaGGGCAGGGACAGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: GLQSLWSLPVTHGPDRSRHTGSR*GRDRES
Trigger: ACTCTCTCTGTCCCTGCCCCAGCGGCTTCCAGTGTG...CCTGGATCTATCTGGGCCATGAGTGACGGGCAGTGACCAGAGGGACTGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR TCA 90 bp TCTGGTCACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTGCGGGCCAGAAAGCTGGGAATGCTaGCACCCCCAGCCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: SGHCPSLMAQIDPGHCGPESWEC*HPQPLV
Trigger: GACAAGAGGCTGGGGGTGTCAGCATTCCCAGCTTTC...TGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTGACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGCAGCCTGTGTAGGACGCGGAGGGGAATAAATAACGGGAACGTGCTCTCTGCGGACACTCCACACGCATaGGGTGAGGGCTGTCCCGGT +
Preference number: 2 (lower is better)
Translates to: GSLCRTRRGINNGNVLSADTPHA*GEGCPG
Trigger: ACCGGGACAGCCCTCACCGCATGCGTGTGGAGTGTC...CGCAGAGAGCACGTTCCCGTTATTTATTCCCCTCCGCGTCCTACACAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GAGAGGGAGGACACGGAGCAGGGTAGGAGGTGCTGCAGGAAGCAAGTGGCGGCAAGCACGCCAGGTGGGTaGCAGTTTCACAGCACATGT +
Preference number: 2 (lower is better)
Translates to: EREDTEQGRRCCRKQVAASTPGG*QFHSTC
Trigger: ACATGTGCTGTGAAACTGGCACCCACCTGGCGTGCT...TGCCGCCACTTGCTTCCTGCAGCACCTCCTACCCTGCTCCGTGTCCTCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp TCTGGTCACTGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTGCGGGCCATGCGCAGCTGTGGTGTaGCAGGTACCATCACCTCCA +
Preference number: 2 (lower is better)
Translates to: SGHCPSLMAQIDPGHCGPCAAVV*QVPSPP
Trigger: TGGAGGTGATGGTACCTGCCACACCACAGCTGCGCA...TGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCAGTGACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR TCA 90 bp GGACTTCAACCTGAAGCCAGCATCCAGGGAAGACTTTGGGGGAAACTGAGGTTCTGCTGTCCCGGCCCCTaGGCAAGCAGCTGTGTGCGC +
Preference number: 2 (lower is better)
Translates to: GLQPEASIQGRLWGKLRFCCPGP*ASSCVR
Trigger: GCGCACACAGCTGCTTGCTCAGGGGCCGGGACAGCA...GAACCTCAGTTTCCCCCAAAGTCTTCCCTGGATGCTGGCTTCAGGTTGAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp CATCACCACTGCCGTCCCCACCACCCGCCCATGCTACTCACATGGACAAGGGCACCAGCCACTGTAATATaGACTGGCCTCAGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: HHHCRPHHPPMLLTWTRAPATVI*TGLSSG
Trigger: GCCAGAGCTGAGGCCAGTCCATATTACAGTGGCTGG...TGCCCTTGTCCATGTGAGTAGCATGGGCGGGTGGTGGGGACGGCAGTGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp CAGTTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTGGGGCCTAACTCCACCATGTGCTCTGTGGTaGCCACGCCCCAGCCACACG +
Preference number: 2 (lower is better)
Translates to: QLGAQWEPVTSRDWGLTPPCALW*PRPSHT
Trigger: CGTGTGGCTGGGGCGTGGCCACCACAGAGCACATGG...TGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR TCA 90 bp CAGTTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTGGGGCCTAACTCCATCAGCCCTTCTCCCATaGAGGCCACTGGGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: QLGAQWEPVTSRDWGLTPSALLP*RPLGSS
Trigger: AGAGCTGCCCAGTGGCCTTCATGGGAGAAGGGCTGA...TGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CAGTTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTGGGGCCTAACTCCACCCACCACCCGCCCATaGTACTCACATGGACAAGGG +
Preference number: 2 (lower is better)
Translates to: QLGAQWEPVTSRDWGLTPPTTRP*YSHGQG
Trigger: CCCTTGTCCATGTGAGTAGCATGGGCGGGTGGTGGG...TGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 90 bp AGTCGGCTTGATCCTTGCGCATGTAAACAGATACTGCTAAAGTGCTaGCGCCTAGACACAGCCATGTGCTCTGTGGTGGCCACGCCCCAG +
Preference number: 2 (lower is better)
Translates to: SRLDPCACKQILLKC*RLDTAMCSVVATPQ
Trigger: CTGGGGCGTGGCCACCACAGAGCACATGGCTGTGTCTAGGCGCAAGCACTTTAGCAGTATCTGTTTACATGCGCAAGGATCAAGCCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CAGTTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTGGGGCCTAACTCCACCTCACGCTGCATCATaGTGGATGATCACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QLGAQWEPVTSRDWGLTPPHAAS*WMITAG
Trigger: CCCAGCTGTGATCATCCAGCATGATGCAGCGTGAGG...TGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp GGACTTCAACCTGAAGCCAGCATCCAGGGAAGACTTTGGGGGAAACTGAGGTTCCAGCTGTCCTCACGCTaGATCATGCTGGATGATCAC +
Preference number: 2 (lower is better)
Translates to: GLQPEASIQGRLWGKLRFQLSSR*IMLDDH
Trigger: GTGATCATCCAGCATGATGCAGCGTGAGGACAGCTG...GAACCTCAGTTTCCCCCAAAGTCTTCCCTGGATGCTGGCTTCAGGTTGAAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CCA 90 bp AGCACAGGTAGTCGGCTTGATCCTTGCGCATGTAAACAGATACTGCTAAAGTGCAGCCACACGCCCATGTaGGAACTGCTTCATGAGGCC +
Preference number: 2 (lower is better)
Translates to: STGSRLDPCACKQILLKCSHTPM*ELLHEA
Trigger: GGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCT...GCACTTTAGCAGTATCTGTTTACATGCGCAAGGATCAAGCCGACTACCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR GCA 90 bp CAGTTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTGGGGCCTAACTCCAACAACCATTTGGCATTaGTTTCCCACTGCCTTCATT +
Preference number: 2 (lower is better)
Translates to: QLGAQWEPVTSRDWGLTPTTIWH*FPTAFI
Trigger: AATGAAGGCAGTGGGAAAGCAATGCCAAATGGTTGT...TGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp GCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATaGCACGCCGCTCCGGGCTCTCTCCCGGACTCGACG +
Preference number: 3 (lower is better)
Translates to: ARAEALSKAEPR*HAAPGSLPDST
Trigger: CGTCGAGTCCGGGAGAGAGCCCGGAGCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp CCGCTCACCGCTGCTGGGCACAGAACGGCCTCCAACTaGAGCTCCTACCAGGGCCTCCAGCCCCAGGCCAGA +
Preference number: 3 (lower is better)
Translates to: PLTAAGHRTASN*SSYQGLQPQAR
Trigger: TCTGGCCTGGGGCTGGAGGCCCTGGTAGGAGCTGCAGTTGGAGGCCGTTCTGTGCCCAGCAGCGGTGAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp GGGGAGAGGGAGGACACGGAGCAGGGTAGGAGGTGCTaGAGGAAGCAAGTGGCGGCAGCAGCACGCCAGGTG +
Preference number: 3 (lower is better)
Translates to: GEREDTEQGRRC*RKQVAAAARQV
Trigger: CACCTGGCGTGCTGCTGCCGCCACTTGCTTCCTGCAGCACCTCCTACCCTGCTCCGTGTCCTCCCTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp GGTGCAGCGGGCATGGGTGCTGGAGGTGGGAGTCGGTaGCAACGGGCCCAGACCGACTTGAGCTCCTCTTGC +
Preference number: 3 (lower is better)
Translates to: GAAGMGAGGGSR*QRAQTDLSSSC
Trigger: GCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACCTCCAGCACCCATGCCCGCTGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp AGGAGTGCTCAGGGGCCGCCCTCAGGGGCTCCAGGGTaGGGAGCTCAGCCTACCCTTGAAGACAGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: RSAQGPPSGAPG*GAQPTLEDSCQ
Trigger: CTGGCAGCTGTCTTCAAGGGTAGGCTGAGCTCCCCACCCTGGAGCCCCTGAGGGCGGCCCCTGAGCACTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp CTCAGCTGGGGCGGACTGCAAGACTGGCACACCCCATaGGGCCGAGTCCTCTCCTTGGGCCTGGCCAAGGAC +
Preference number: 3 (lower is better)
Translates to: LSWGGLQDWHTP*GRVLSLGLAKD
Trigger: GTCCTTGGCCAGGCCCAAGGAGAGGACTCGGCCCCATGGGGTGTGCCAGTCTTGCAGTCCGCCCCAGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp TTGCCCGGCTACGGGCTTTTTGCCTCTTTCTCCAGCTaGCAACCGGGCCCCGGGACCCTCAGACTCTGCCGC +
Preference number: 3 (lower is better)
Translates to: LPGYGLFASFSS*QPGPGTLRLCR
Trigger: GCGGCAGAGTCTGAGGGTCCCGGGGCCCGGTTGGCAGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp CCCGGGACCCTCAGACTCTGCCGCCTGGGGGCAGCTTaGAAAGCTGGGAATGCTGACACCCCCAGCCTCTTG +
Preference number: 3 (lower is better)
Translates to: PGTLRLCRLGAA*KAGNADTPSLL
Trigger: CAAGAGGCTGGGGGTGTCAGCATTCCCAGCTTTCCAAGCTGCCCCCAGGCGGCAGAGTCTGAGGGTCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp ACACCGACCCGCGTTCAGGGAAGAGGCGGGTCTCTGTaGCGTCATCTGGCTCACGCTACTCAGCTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: TPTRVQGRGGSL*RHLAHATQLGR
Trigger: CCGCCCCAGCTGAGTAGCGTGAGCCAGATGACGCCACAGAGACCCGCCTCTTCCCTGAACGCGGGTCGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp GCAGACACAGGGCCCATGGGAGCCGCTCACCGCTGCTaGGCACAGAACGGCCTCCAACTGCAGCTCCTACCA +
Preference number: 3 (lower is better)
Translates to: ADTGPMGAAHRC*AQNGLQLQLLP
Trigger: TGGTAGGAGCTGCAGTTGGAGGCCGTTCTGTGCCCAGCAGCGGTGAGCGGCTCCCATGGGCCCTGTGTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CAA 90 bp CATCACCACTGCCGTCCCCACCACCCGCCCATGCTACTCACATGGACAAGGGCACGGGCCCAGACCGACTaGAGCTCCTCTTGCCCGGCT +
Preference number: 3 (lower is better)
Translates to: HHHCRPHHPPMLLTWTRARAQTD*SSSCPA
Trigger: AGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCG...TGCCCTTGTCCATGTGAGTAGCATGGGCGGGTGGTGGGGACGGCAGTGGTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 72 bp GAGGTGGGAGTCGGTGGCAACGGGCCCAGACCGACTTaGGCTCCTCTTGCCCGGCTACGGGCTTTTTGCCTC +
Preference number: 3 (lower is better)
Translates to: EVGVGGNGPRPT*APLARLRAFCL
Trigger: GAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp TGCCCGTCACTCATGGCCCAGATAGATCCAGGCCACTaGGGGCCAGAGGAGCCCTGCCACAGACCTCAAGGC +
Preference number: 3 (lower is better)
Translates to: CPSLMAQIDPGH*GPEEPCHRPQG
Trigger: GCCTTGAGGTCTGTGGCAGGGCTCCTCTGGCCCGCAGTGGCCTGGATCTATCTGGGCCATGAGTGACGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp GGTGGCCACGCCCCAGCCACACGCCCATGTGGGAACTaGTTCATGAGGCCTGTGGTGCACCCCCTTCATCAC +
Preference number: 3 (lower is better)
Translates to: GGHAPATRPCGN*FMRPVVHPLHH
Trigger: GTGATGAAGGGGGTGCACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp CAGGAAGCAAGTGGCGGCAGCAGCACGCCAGGTGGGTaGCAGTTTCACAGCACATGTGCCGCAGCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: QEASGGSSTPGG*QFHSTCAAALA
Trigger: AGCCAGGGCTGCGGCACATGTGCTGTGAAACTGGCACCCACCTGGCGTGCTGCTGCCGCCACTTGCTTCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp GGTCTCTGTGGCGTCATCTGGCTCACGCTACTCAGCTaGGGCGGACTGCAAGACTGGCACACCCCATGGGGC +
Preference number: 3 (lower is better)
Translates to: GLCGVIWLTLLS*GGLQDWHTPWG
Trigger: GCCCCATGGGGTGTGCCAGTCTTGCAGTCCGCCCCAGCTGAGTAGCGTGAGCCAGATGACGCCACAGAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CAA 90 bp GGCCACGCCCCAGCCACACGCCCATGTGGGAACTGCTTCATGAGGCCTGTGGTGGAGCTCAGCCTACCCTaGAAGACAGCTGCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: GHAPATRPCGNCFMRPVVELSLP*KTAARA
Trigger: TGCCCTGGCAGCTGTCTTCAAGGGTAGGCTGAGCTC...CACCACAGGCCTCATGAAGCAGTTCCCACATGGGCGTGTGGCTGGGGCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 72 bp CAGCTCTTGCCAGGCAATGAAGGTCCTTGGCCAGCCTaGGCACCCAGTGCTGTCCCGGCCCCTGAGCAAGCA +
Preference number: 3 (lower is better)
Translates to: QLLPGNEGPWPA*APSAVPAPEQA
Trigger: TGCTTGCTCAGGGGCCGGGACAGCACTGGGTGCTCAGGCTGGCCAAGGACCTTCATTGCCTGGCAAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 72 bp AGGTATATCAAGAGGCCAGGCTCCCAGGCCGAGGCGTaGGCTTTTCCAGCACTCCTGAGCCAGGCGCGGGGA +
Preference number: 3 (lower is better)
Translates to: RYIKRPGSQAEA*AFPALLSQARG
Trigger: TCCCCGCGCCTGGCTCAGGAGTGCTGGAAAAGCTCACGCCTCGGCCTGGGAGCCTGGCCTCTTGATATACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp CCAGGGTGGGGAGCTCAGCCTACCCTTGAAGACAGCTaGCAGGGCAGCCTGTGTAGGACGCGGAGGGGAATA +
Preference number: 3 (lower is better)
Translates to: PGWGAQPTLEDS*QGSLCRTRRGI
Trigger: TATTCCCCTCCGCGTCCTACACAGGCTGCCCTGGCAGCTGTCTTCAAGGGTAGGCTGAGCTCCCCACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp CAGATAGATCCAGGCCACTGCGGGCCAGAGGAGCCCTaGCACAGACCTCAAGGCCCAAGCAGAGTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: QIDPGHCGPEEP*HRPQGPSRVQQ
Trigger: CTGCTGCACTCTGCTTGGGCCTTGAGGTCTGTGGCAGGGCTCCTCTGGCCCGCAGTGGCCTGGATCTATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp GCCCCTGAGCAAGCAGCTGTGTGCGCAGCTGTGGTGTaGCAGGTACCATCACCTCCACACAGGAAGAGCCGG +
Preference number: 3 (lower is better)
Translates to: APEQAAVCAAVV*QVPSPPHRKSR
Trigger: CCGGCTCTTCCTGTGTGGAGGTGATGGTACCTGCCACACCACAGCTGCGCACACAGCTGCTTGCTCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp AGGGCAAGGGTGGACACCGCTGGCCTCCAGTCCCTCTaGTCACTGCCCGTCACTCATGGCCCAGATAGATCC +
Preference number: 3 (lower is better)
Translates to: RARVDTAGLQSL*SLPVTHGPDRS
Trigger: GGATCTATCTGGGCCATGAGTGACGGGCAGTGACCAGAGGGACTGGAGGCCAGCGGTGTCCACCCTTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CAA 90 bp GGAGAAAGCCAGGGCGGAGGCTCTCAGCAAGGCCGAGCCGAGATGGCACGCCGCGCACAGGTAGTCGGCTaGATCCTTGCGCATGTAAAC +
Preference number: 3 (lower is better)
Translates to: GESQGGGSQQGRAEMARRAQVVG*ILAHVN
Trigger: GTTTACATGCGCAAGGATCAAGCCGACTACCTGTGC...GCGGCGTGCCATCTCGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CAA 90 bp CATCACCACTGCCGTCCCCACCACCCGCCCATGCTACTCACATGGACAAGGGCACCGGCTACGGGCTTTTaGCCTCTTTCTCCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: HHHCRPHHPPMLLTWTRAPATGF*PLSPAA
Trigger: GGCAGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGG...TGCCCTTGTCCATGTGAGTAGCATGGGCGGGTGGTGGGGACGGCAGTGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp CGGTGGCAACGGGCCCAGACCGACTTGAGCTCCTCTTaGCCGGCTACGGGCTTTTTGCCTCTTTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: RWQRAQTDLSSS*PATGFLPLSPA
Trigger: AGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp AGACTAAACGCTAGCACAATCATGCATGCCCCGTGGTaGCGCGGCACCCCAGAGGCTCTCAGGGTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: RLNASTIMHAPW*RGTPEALRVSR
Trigger: CCTGCTGACCCTGAGAGCCTCTGGGGTGCCGCGGCACCACGGGGCATGCATGATTGTGCTAGCGTTTAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp TCCCGGCCCCTGAGCAAGCAGCTGTGTGCGCAGCTGTaGTGTGGCAGGTACCATCACCTCCACACAGGAAGA +
Preference number: 3 (lower is better)
Translates to: SRPLSKQLCAQL*CGRYHHLHTGR
Trigger: TCTTCCTGTGTGGAGGTGATGGTACCTGCCACACCACAGCTGCGCACACAGCTGCTTGCTCAGGGGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp CTCAGACTAAACGCTAGCACAATCATGCATGCCCCGTaGTGCCGCGGCACCCCAGAGGCTCTCAGGGTCAGC +
Preference number: 3 (lower is better)
Translates to: LRLNASTIMHAP*CRGTPEALRVS
Trigger: GCTGACCCTGAGAGCCTCTGGGGTGCCGCGGCACCACGGGGCATGCATGATTGTGCTAGCGTTTAGTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp ATACTGCTAAAGTGCTTGCGCCTAGACACAGCCATGTaGTCTGTGGTGGCCACGCCCCAGCCACACGCCCAT +
Preference number: 3 (lower is better)
Translates to: ILLKCLRLDTAM*SVVATPQPHAH
Trigger: ATGGGCGTGTGGCTGGGGCGTGGCCACCACAGAGCACATGGCTGTGTCTAGGCGCAAGCACTTTAGCAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp TTAGGAGCACAGTGGGAACCAGTGACAAGTAGGGACTaGGGCCTAACTCCACGACCTGGCAGAGGGAGGTAC +
Preference number: 3 (lower is better)
Translates to: LGAQWEPVTSRD*GLTPRPGRGRY
Trigger: GTACCTCCCTCTGCCAGGTCGTGGAGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp CCAGAGCTCCCAGGTGCTGCACAGTTAGGAGCACAGTaGGAACCAGTGACAAGTAGGGACTGGGGCCTAACT +
Preference number: 3 (lower is better)
Translates to: PELPGAAQLGAQ*EPVTSRDWGLT
Trigger: AGTTAGGCCCCAGTCCCTACTTGTCACTGGTTCCCACTGTGCTCCTAACTGTGCAGCACCTGGGAGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp GCAGAGCAGAGCACAAGGCCTAAGGAGAGTGGGGGTTaGAACTGGATTCTGAAGGTGATGCAGGAGCCCCTA +
Preference number: 3 (lower is better)
Translates to: AEQSTRPKESGG*NWILKVMQEPL
Trigger: TAGGGGCTCCTGCATCACCTTCAGAATCCAGTTCCAACCCCCACTCTCCTTAGGCCTTGTGCTCTGCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CCA 72 bp CAGAGCACAAGGCCTAAGGAGAGTGGGGGTTGGAACTaGATTCTGAAGGTGATGCAGGAGCCCCTACCTAAC +
Preference number: 3 (lower is better)
Translates to: QSTRPKESGGWN*ILKVMQEPLPN
Trigger: GTTAGGTAGGGGCTCCTGCATCACCTTCAGAATCCAGTTCCAACCCCCACTCTCCTTAGGCCTTGTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 72 bp ACCCGTGAGGAACTGGAAGAACCAGGGACTTCAACCTaGAGCCAGCATCCAGGGAAGACTTTGGGGGAAACT +
Preference number: 3 (lower is better)
Translates to: TREELEEPGTST*SQHPGKTLGET
Trigger: AGTTTCCCCCAAAGTCTTCCCTGGATGCTGGCTTCAGGTTGAAGTCCCTGGTTCTTCCAGTTCCTCACGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR TCA 72 bp ATTCTGAAGGTGATGCAGGAGCCCCTACCTAACCCGTaGGGAACTGGAAGAACCAGGGACTTCAACCTGAAG +
Preference number: 3 (lower is better)
Translates to: ILKVMQEPLPNP*GTGRTRDFNLK
Trigger: CTTCAGGTTGAAGTCCCTGGTTCTTCCAGTTCCTCACGGGTTAGGTAGGGGCTCCTGCATCACCTTCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR-3UTR CAA 90 bp AGCACAGGTAGTCGGCTTGATCCTTGCGCATGTAAACAGATACTGCTAAAGTGCCGACTTGAGCTCCTCTaGCCCGGCTACGGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: STGSRLDPCACKQILLKCRLELL*PGYGLF
Trigger: AAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCG...GCACTTTAGCAGTATCTGTTTACATGCGCAAGGATCAAGCCGACTACCTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp GTCCCAGTAGACAGCACAGGTAGTCGGCTTGATCCTTaGGCATGTAAACAGATACTGCTAAAGTGCTTGCGC +
Preference number: 3 (lower is better)
Translates to: VPVDSTGSRLDP*ACKQILLKCLR
Trigger: GCGCAAGCACTTTAGCAGTATCTGTTTACATGCGCAAGGATCAAGCCGACTACCTGTGCTGTCTACTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR GCA 72 bp CTTGATCCTTGCGCATGTAAACAGATACTGCTAAAGTaGTTGCGCCTAGACACAGCCATGTGCTCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: LDPCACKQILLK*LRLDTAMCSVV
Trigger: CACCACAGAGCACATGGCTGTGTCTAGGCGCAAGCACTTTAGCAGTATCTGTTTACATGCGCAAGGATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 72 bp GGAGGTGGGAGTCGGTGGCAACGGGCCCAGACCGACTaGAGCTCCTCTTGCCCGGCTACGGGCTTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GGGSRWQRAQTD*SSSCPATGFLP
Trigger: AGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGACTCCCACCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 72 bp ACCGACTTGAGCTCCTCTTGCCCGGCTACGGGCTTTTaGCCTCTTTCTCCAGCTGCCAACCGGGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TDLSSSCPATGF*PLSPAANRAPG
Trigger: TCCCGGGGCCCGGTTGGCAGCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 72 bp TCGGTGGCAACGGGCCCAGACCGACTTGAGCTCCTCTaGCCCGGCTACGGGCTTTTTGCCTCTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVATGPDRLELL*PGYGLFASFSS
Trigger: GCTGGAGAAAGAGGCAAAAAGCCCGTAGCCGGGCAAGAGGAGCTCAAGTCGGTCTGGGCCCGTTGCCACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 72 bp GCTTGGAAAGCTGGGAATGCTGACACCCCCAGCCTCTaGTCCTGGTCTCAAGGGGACAGCCCAAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: AWKAGNADTPSL*SWSQGDSPSWL
Trigger: TAGCCAGCTTGGGCTGTCCCCTTGAGACCAGGACAAGAGGCTGGGGGTGTCAGCATTCCCAGCTTTCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.2
3UTR CAA 72 bp GATCCTTGCGCATGTAAACAGATACTGCTAAAGTGCTaGCGCCTAGACACAGCCATGTGCTCTGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DPCACKQILLKC*RLDTAMCSVVA
Trigger: GGCCACCACAGAGCACATGGCTGTGTCTAGGCGCAAGCACTTTAGCAGTATCTGTTTACATGCGCAAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.2
CDS TCA 90 bp GTCTCCCTGGCCCCGCGTGATGGGCGCCACCTCCCGGGCGGAGGGTaGGCGGCAGTGGATCCGGCCATCCTCCAGGACGCTCTCAGATTC +
Preference number: 5 (lower is better)
Translates to: VSLAPRDGRHLPGGG*AAVDPAILQDALRF
Trigger: GAATCTGAGAGCGTCCTGGAGGATGGCCGGATCCACTGCCGCTCACCCTCCGCCCGGGAGGTGGCGCCCATCACGCGGGGCCAGGGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 90 bp GGGGTCGGTGCAGCGACTGCTGCCGTGACGCGCGTGCATCCACGATaGAGGTGTGTCGGCAGCGCAGTGGTGTCGCAGGGAGCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: GVGAATAAVTRVHPR*RCVGSAVVSQGAAA
Trigger: CGCCGCTGCTCCCTGCGACACCACTGCGCTGCCGACACACCTGCATCGTGGATGCACGCGCGTCACGGCAGCAGTCGCTGCACCGACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 90 bp GGCGGCATGAGGCTGCAGCCAGGACCCCCGGGCCTACCCCCAACCTaGCCCTCCACCCGTCGAGTGCCAGCCATGGTGTTCCTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: GGMRLQPGPPGLPPT*PSTRRVPAMVFLAR
Trigger: CCTTGCCAGGAACACCATGGCTGGCACTCGACGGGTGGAGGGGCAGGTTGGGGGTAGGCCCGGGGGTCCTGGCTGCAGCCTCATGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 90 bp ATCGATGGGTGTGCCCACGAAGAGCTTGGCCTGGCCCTGGCCCGGTaGCCCGGCAATGAGCACGCCCGCCATGCTGCCTGCCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: IDGCAHEELGLALAR*PGNEHARHAACLLH
Trigger: GTGCAGGAGGCAGGCAGCATGGCGGGCGTGCTCATTGCCGGGCCACCGGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CCA 90 bp GACTTGCCATCGATGGGTGTGCCCACGAAGAGCTTGGCCTGGCCCTaGCCCGGTGGCCCGGCAATGAGCACGCCCGCCATGCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: DLPSMGVPTKSLAWP*PGGPAMSTPAMLPA
Trigger: GGCAGGCAGCATGGCGGGCGTGCTCATTGCCGGGCCACCGGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCAAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CCA 90 bp GTTGTCCATGACGAAGCCCAGCTCATCCGGCCGCTCCCCCAGCTCTaGTGGGCTGCGCACAGGGTTGGCCACAGACGGGGCGCGGCATAC +
Preference number: 5 (lower is better)
Translates to: VVHDEAQLIRPLPQL*WAAHRVGHRRGAAY
Trigger: GTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGCGCAGCCCACCAGAGCTGGGGGAGCGGCCGGATGAGCTGGGCTTCGTCATGGACAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp TACTCGGACTTGCCATCGATGGGTGTGCCCACGAAGAGCTTGGCCTaGCCCTGGCCCGGTGGCCCGGCAATGAGCACGCCCGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: YSDLPSMGVPTKSLA*PWPGGPAMSTPAML
Trigger: CAGCATGGCGGGCGTGCTCATTGCCGGGCCACCGGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCAAGTCCGAGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CCA 90 bp CGGGCCGGGCTGCCCGGGATGTGGAAGAGGCACTCATATCCACGCTaGCCTGACTGTGGCTGTGGCAGGTTCCGTGCGGCCAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RAGLPGMWKRHSYPR*PDCGCGRFRAARVM
Trigger: CATCACCCTGGCCGCACGGAACCTGCCACAGCCACAGTCAGGCCAGCGTGGATATGAGTGCCTCTTCCACATCCCGGGCAGCCCGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 90 bp GGGGACAGCTTGAGGATCTTGGGGTCGGTGCAGCGACTGCTGCCGTaGCGCGCGTGCATCCACGATGCAGGTGTGTCGGCAGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GDSLRILGSVQRLLP*RACIHDAGVSAAQW
Trigger: CCACTGCGCTGCCGACACACCTGCATCGTGGATGCACGCGCGTCACGGCAGCAGTCGCTGCACCGACCCCAAGATCCTCAAGCTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp TGCACAGTCAGCTGCACACACTGCAGCAGGTCCGCAGCAAAGCGCTaGGGCTCGTCTGCTCGCTCACAGGCGTCCCGCCGCGAGCAGATG +
Preference number: 5 (lower is better)
Translates to: CTVSCTHCSRSAAKR*GSSARSQASRREQM
Trigger: CATCTGCTCGCGGCGGGACGCCTGTGAGCGAGCAGACGAGCCCCAGCGCTTTGCTGCGGACCTGCTGCAGTGTGTGCAGCTGACTGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp GGCCGGCCACCGACCGACACAGCCACATCACTGCCTGCGTTCAGGTaGCTTCCCTCGATGCCAATCCAGGTGCCCCCTGACAGAGGCCCA +
Preference number: 5 (lower is better)
Translates to: GRPPTDTATSLPAFR*LPSMPIQVPPDRGP
Trigger: TGGGCCTCTGTCAGGGGGCACCTGGATTGGCATCGAGGGAAGCCACCTGAACGCAGGCAGTGATGTGGCTGTGTCGGTCGGTGGCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp GCTCATCCGGCCGCTCCCCCAGCTCTGGTGGGCTGCGCACAGGGTTaGCCACAGACGGGGCGCGGCATACCATGGTGGTGTCATTGTACA +
Preference number: 5 (lower is better)
Translates to: AHPAAPPALVGCAQG*PQTGRGIPWWCHCT
Trigger: TGTACAATGACACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGCGCAGCCCACCAGAGCTGGGGGAGCGGCCGGATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 90 bp GTGAATGGAGAGCTGTCCCTGGGAAACGTTCACGTCTGGGCTGGGTaGGTTGGCCACACAGGCGAGGCCCGCCCAGAGCCTGGGCATGGG +
Preference number: 5 (lower is better)
Translates to: VNGELSLGNVHVWAG*VGHTGEARPEPGHG
Trigger: CCCATGCCCAGGCTCTGGGCGGGCCTCGCCTGTGTGGCCAACTCACCCAGCCCAGACGTGAACGTTTCCCAGGGACAGCTCTCCATTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS GCA 90 bp CCGACACAGCCACATCACTGCCTGCGTTCAGGTGGCTTCCCTCGATaGCAATCCAGGTGCCCCCTGACAGAGGCCCACGGGAGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PTQPHHCLRSGGFPR*QSRCPLTEAHGRGS
Trigger: TGAGCCCCTCCCGTGGGCCTCTGTCAGGGGGCACCTGGATTGGCATCGAGGGAAGCCACCTGAACGCAGGCAGTGATGTGGCTGTGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 90 bp AGGAGAAGGAGCAGGGCCGGCCACCGACCGACACAGCCACATCACTaGCTGCGTTCAGGTGGCTTCCCTCGATGCCAATCCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: RRRSRAGHRPTQPHH*LRSGGFPRCQSRCP
Trigger: GGGGCACCTGGATTGGCATCGAGGGAAGCCACCTGAACGCAGGCAGTGATGTGGCTGTGTCGGTCGGTGGCCGGCCCTGCTCCTTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 90 bp AGGCCCGCCCAGAGCCTGGGCATGGGGTCCACTGTAGGTCCTGCCTaGCCAAGGGCCTTCAGGTGTGTGTACACCTCAATGGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: RPAQSLGMGSTVGPA*PRAFRCVYTSMEGQ
Trigger: CTGCCCCTCCATTGAGGTGTACACACACCTGAAGGCCCTTGGGCAGGCAGGACCTACAGTGGACCCCATGCCCAGGCTCTGGGCGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 90 bp GGCAGGCAGCGTCAGCAGGCTGTCCGAGTACACCTGCAGTGTCCCTaGCGAGAACTCGAAGCCACCTGCCCGCACCGTGACCTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GRQRQQAVRVHLQCP*RELEATCPHRDLVL
Trigger: CAGCACAAGGTCACGGTGCGGGCAGGTGGCTTCGAGTTCTCGCCAGGGACACTGCAGGTGTACTCGGACAGCCTGCTGACGCTGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 90 bp CGGGCTGCCCGGGATGTGGAAGAGGCACTCATATCCACGCTGGCCTaGCTGTGGCTGTGGCAGGTTCCGTGCGGCCAGGGTGATGGGTTT +
Preference number: 5 (lower is better)
Translates to: RAARDVEEALISTLA*LWLWQVPCGQGDGF
Trigger: AAACCCATCACCCTGGCCGCACGGAACCTGCCACAGCCACAGTCAGGCCAGCGTGGATATGAGTGCCTCTTCCACATCCCGGGCAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 90 bp GCCTGCGTTCAGGTGGCTTCCCTCGATGCCAATCCAGGTGCCCCCTaGCAGAGGCCCACGGGAGGGGCTCACACGGTAGAAGGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: ACVQVASLDANPGAP*QRPTGGAHTVEGWC
Trigger: ACACCAACCTTCTACCGTGTGAGCCCCTCCCGTGGGCCTCTGTCAGGGGGCACCTGGATTGGCATCGAGGGAAGCCACCTGAACGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 90 bp GGATCTTGCGGATGCGGCCACTTCGCGTGCCGGCGAATACCACAGTaGGGCCCCGATAGTCATAGGCAGCCACGGCGGTCAGGCCATCAT +
Preference number: 5 (lower is better)
Translates to: GSCGCGHFACRRIPQ*GPDSHRQPRRSGHH
Trigger: ATGATGGCCTGACCGCCGTGGCTGCCTATGACTATCGGGGCCGCACTGTGGTATTCGCCGGCACGCGAAGTGGCCGCATCCGCAAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 90 bp ATGCCCACAATGGCAGGCAGCGTCAGCAGGCTGTCCGAGTACACCTaGAGTGTCCCTGGCGAGAACTCGAAGCCACCTGCCCGCACCGTG +
Preference number: 5 (lower is better)
Translates to: MPTMAGSVSRLSEYT*SVPGENSKPPARTV
Trigger: CACGGTGCGGGCAGGTGGCTTCGAGTTCTCGCCAGGGACACTGCAGGTGTACTCGGACAGCCTGCTGACGCTGCCTGCCATTGTGGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 90 bp CATGCGGTGAGGGCTGTCCCGGTCCCTGCTCAGCTGTCCTCACGCTaGATCATGCTGGATGATCACAGCTGGGGCTCAGCTGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: HAVRAVPVPAQLSSR*IMLDDHSWGSAAQG
Trigger: GCCCTGAGCAGCTGAGCCCCAGCTGTGATCATCCAGCATGATGCAGCGTGAGGACAGCTGAGCAGGGACCGGGACAGCCCTCACCGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000503234.5
CDS TCA 90 bp CACGCTGGCCTGACTGTGGCTGTGGCAGGTTCCGTGCGGCCAGGGTaGTGGGTTTTACCACTCCCACTGGCACGTAGATCTGCGTGGAGG +
Preference number: 5 (lower is better)
Translates to: HAGLTVAVAGSVRPG*WVLPLPLARRSAWR
Trigger: CCTCCACGCAGATCTACGTGCCAGTGGGAGTGGTAAAACCCATCACCCTGGCCGCACGGAACCTGCCACAGCCACAGTCAGGCCAGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp GGCTGCGCACAGGGTTGGCCACAGACGGGGCGCGGCATACCATGGTaGTGTCATTGTACACCAGGCAGCCGTTCTCCCTCTCAATGCCTC +
Preference number: 5 (lower is better)
Translates to: GCAQGWPQTGRGIPW*CHCTPGSRSPSQCL
Trigger: GAGGCATTGAGAGGGAGAACGGCTGCCTGGTGTACAATGACACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGCGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp GTGGGCTGCGCACAGGGTTGGCCACAGACGGGGCGCGGCATACCATaGTGGTGTCATTGTACACCAGGCAGCCGTTCTCCCTCTCAATGC +
Preference number: 5 (lower is better)
Translates to: VGCAQGWPQTGRGIP*WCHCTPGSRSPSQC
Trigger: GCATTGAGAGGGAGAACGGCTGCCTGGTGTACAATGACACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGCGCAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp TTGAGTGAATGGAGAGCTGTCCCTGGGAAACGTTCACGTCTGGGCTaGGTGAGTTGGCCACACAGGCGAGGCCCGCCCAGAGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LSEWRAVPGKRSRLG*VSWPHRRGPPRAWA
Trigger: TGCCCAGGCTCTGGGCGGGCCTCGCCTGTGTGGCCAACTCACCCAGCCCAGACGTGAACGTTTCCCAGGGACAGCTCTCCATTCACTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS GCA 90 bp ACCTGGGACATGGTGACAGACACATTGCGGGGCTGCACAGTCAGCTaGACACACTGCAGCAGGTCCGCAGCAAAGCGCTGGGGCTCGTCT +
Preference number: 5 (lower is better)
Translates to: TWDMVTDTLRGCTVS*THCSRSAAKRWGSS
Trigger: AGACGAGCCCCAGCGCTTTGCTGCGGACCTGCTGCAGTGTGTGCAGCTGACTGTGCAGCCCCGCAATGTGTCTGTCACCATGTCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp TGGCAGGTTCCGTGCGGCCAGGGTGATGGGTTTTACCACTCCCACTaGCACGTAGATCTGCGTGGAGGGCAGGATCTGTGGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: WQVPCGQGDGFYHSH*HVDLRGGQDLWAVL
Trigger: GAGGACTGCCCACAGATCCTGCCCTCCACGCAGATCTACGTGCCAGTGGGAGTGGTAAAACCCATCACCCTGGCCGCACGGAACCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp CCTGCTCAGCTGTCCTCACGCTGCATCATGCTGGATGATCACAGCTaGGGCTCAGCTGCTCAGGGCCATCGTGTCCACCACCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PAQLSSRCIMLDDHS*GSAAQGHRVHHLLQ
Trigger: CTGGAGCAGGTGGTGGACACGATGGCCCTGAGCAGCTGAGCCCCAGCTGTGATCATCCAGCATGATGCAGCGTGAGGACAGCTGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000503234.5
CDS GCA 90 bp AGCACAAGTGGGACCTGGGACATGGTGACAGACACATTGCGGGGCTaGACAGTCAGCTGCACACACTGCAGCAGGTCCGCAGCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: STSGTWDMVTDTLRG*TVSCTHCSRSAAKR
Trigger: GCGCTTTGCTGCGGACCTGCTGCAGTGTGTGCAGCTGACTGTGCAGCCCCGCAATGTGTCTGTCACCATGTCCCAGGTCCCACTTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 90 bp CCAAGGGCCTTCAGGTGTGTGTACACCTCAATGGAGGGGCAGGTTTaGCAGCCCTGCCTCCTACCCGGCCCTGGCAAACAAACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PRAFRCVYTSMEGQV*QPCLLPGPGKQTAA
Trigger: AGCTGCTGTTTGTTTGCCAGGGCCGGGTAGGAGGCAGGGCTGCCAAACCTGCCCCTCCATTGAGGTGTACACACACCTGAAGGCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 90 bp CAGCTGGAGGTGCTCAGGACAAAGCTCCCCATGGCCCACCGCCCATaGCACAAGCGGACCCCATACTACGCAACTCCAAGTGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: QLEVLRTKLPMAHRP*HKRTPYYATPSVTV
Trigger: CACAGTCACACTTGGAGTTGCGTAGTATGGGGTCCGCTTGTGCCATGGGCGGTGGGCCATGGGGAGCTTTGTCCTGAGCACCTCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 90 bp CCTGGTACACGAAGCCGAACATGTCGGCATCCTCCTCGTTGGCCATaGGCCGACGGCTGGACAGTGTGGGGAAGTACTCGGACTTGCCAT +
Preference number: 5 (lower is better)
Translates to: PGTRSRTCRHPPRWP*ADGWTVWGSTRTCH
Trigger: ATGGCAAGTCCGAGTACTTCCCCACACTGTCCAGCCGTCGGCTCATGGCCAACGAGGAGGATGCCGACATGTTCGGCTTCGTGTACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS GCA 90 bp ATTTCCCCTGGCATCTTCATGGGCCCTTGTGGACCCAACCCAATGTaGCCTCTTCAGAAAGGCTCCTGGGGAGCGCCCAGCACACGTACC +
Preference number: 5 (lower is better)
Translates to: ISPGIFMGPCGPNPM*PLQKGSWGAPSTRT
Trigger: GGTACGTGTGCTGGGCGCTCCCCAGGAGCCTTTCTGAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 90 bp AACAGGCACAGTGCTGACTCCTTTGGTGGCTTCACGCGGTTCTTCTaGCCCTGGGCGAACACAGTGAACAGCACGTCCTCGTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: NRHSADSFGGFTRFF*PWANTVNSTSSSSA
Trigger: GGCTGAGGACGAGGACGTGCTGTTCACTGTGTTCGCCCAGGGCCAGAAGAACCGCGTGAAGCCACCAAAGGAGTCAGCACTGTGCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CCA 90 bp CATTGTACACCAGGCAGCCGTTCTCCCTCTCAATGCCTCCATACTTaGCCCGGATTCGGGGTTCACGGACAGTGGCCAGGTTGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: HCTPGSRSPSQCLHT*PGFGVHGQWPGWCL
Trigger: CAGGCACCAACCTGGCCACTGTCCGTGAACCCCGAATCCGGGCCAAGTATGGAGGCATTGAGAGGGAGAACGGCTGCCTGGTGTACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 90 bp GGGTGCAGATCCGGATGGAGAGCCATTAATGTGACAGGAAGCCTTTaGGGGTTTCCCAAAGTCAGACACCTGTCCGAGGGTTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GCRSGWRAINVTGSL*GFPKVRHLSEGSQA
Trigger: GGCCTGGGAACCCTCGGACAGGTGTCTGACTTTGGGAAACCCTCAAAGGCTTCCTGTCACATTAATGGCTCTCCATCCGGATCTGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 90 bp TCTGGGACACAACTATGGTGTGTCATGGATACTGACATACCCACCTaGGGAGGCTTGCCCACCCAGGGAGGTTCACCAGCACCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: SGTQLWCVMDTDIPT*GGLPTQGGSPAPKH
Trigger: GTGCTTGGGTGCTGGTGAACCTCCCTGGGTGGGCAAGCCTCCTCAGGTGGGTATGTCAGTATCCATGACACACCATAGTTGTGTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS GCA 90 bp AACTATGGTGTGTCATGGATACTGACATACCCACCTGAGGAGGCTTaGCCACCCAGGGAGGTTCACCAGCACCCAAGCACACAGCACAGG +
Preference number: 5 (lower is better)
Translates to: NYGVSWILTYPPEEA*PPREVHQHPSTQHR
Trigger: CCTGTGCTGTGTGCTTGGGTGCTGGTGAACCTCCCTGGGTGGGCAAGCCTCCTCAGGTGGGTATGTCAGTATCCATGACACACCATAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 90 bp GCCTCTACAACCAGAAATTTCCCCTGGCATCTTCATGGGCCCTTGTaGACCCAACCCAATGTGCCCTCTTCAGAAAGGCTCCTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: ASTTRNFPWHLHGPL*TQPNVPSSERLLGS
Trigger: GCTCCCCAGGAGCCTTTCTGAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAATTTCTGGTTGTAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 90 bp CAGCTGGGCCCCCATATTACTCTGGGACACAACTATGGTGTGTCATaGATACTGACATACCCACCTGAGGAGGCTTGCCCACCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: QLGPHITLGHNYGVS*ILTYPPEEACPPRE
Trigger: CTCCCTGGGTGGGCAAGCCTCCTCAGGTGGGTATGTCAGTATCCATGACACACCATAGTTGTGTCCCAGAGTAATATGGGGGCCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 90 bp GCCCCCATATTACTCTGGGACACAACTATGGTGTGTCATGGATACTaGCATACCCACCTGAGGAGGCTTGCCCACCCAGGGAGGTTCACC +
Preference number: 5 (lower is better)
Translates to: APILLWDTTMVCHGY*HTHLRRLAHPGRFT
Trigger: GGTGAACCTCCCTGGGTGGGCAAGCCTCCTCAGGTGGGTATGTCAGTATCCATGACACACCATAGTTGTGTCCCAGAGTAATATGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 90 bp AGGAGGAGGAAAAGGGGTGCAGATCCGGATGGAGAGCCATTAATGTaGCAGGAAGCCTTTGAGGGTTTCCCAAAGTCAGACACCTGTCCG +
Preference number: 5 (lower is better)
Translates to: RRRKRGADPDGEPLM*QEAFEGFPKSDTCP
Trigger: CGGACAGGTGTCTGACTTTGGGAAACCCTCAAAGGCTTCCTGTCACATTAATGGCTCTCCATCCGGATCTGCACCCCTTTTCCTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 90 bp TGCAACTGCTGCCTCTACAACCAGAAATTTCCCCTGGCATCTTCATaGGCCCTTGTGGACCCAACCCAATGTGCCCTCTTCAGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: CNCCLYNQKFPLASS*ALVDPTQCALFRKA
Trigger: AGCCTTTCTGAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAATTTCTGGTTGTAGAGGCAGCAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp TGTGCCCACGAAGAGCTTGGCCTGGCCCTGGCCCGGTaGCCCGGCAATGAGCACGCCCGCCATGCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: CAHEELGLALAR*PGNEHARHAAC
Trigger: GCAGGCAGCATGGCGGGCGTGCTCATTGCCGGGCCACCGGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CCA 72 bp GACGAAGCCCAGCTCATCCGGCCGCTCCCCCAGCTCTaGTGGGCTGCGCACAGGGTTGGCCACAGACGGGGC +
Preference number: 6 (lower is better)
Translates to: DEAQLIRPLPQL*WAAHRVGHRRG
Trigger: GCCCCGTCTGTGGCCAACCCTGTGCGCAGCCCACCAGAGCTGGGGGAGCGGCCGGATGAGCTGGGCTTCGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 72 bp GGCCGCTCCCCCAGCTCTGGTGGGCTGCGCACAGGGTaGGCCACAGACGGGGCGCGGCATACCATGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GRSPSSGGLRTG*ATDGARHTMVV
Trigger: CACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGCGCAGCCCACCAGAGCTGGGGGAGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp AGGCTGCAGCCAGGACCCCCGGGCCTACCCCCAACCTaGCCCTCCACCCGTCGAGTGCCAGCCATGGTGTTC +
Preference number: 6 (lower is better)
Translates to: RLQPGPPGLPPT*PSTRRVPAMVF
Trigger: GAACACCATGGCTGGCACTCGACGGGTGGAGGGGCAGGTTGGGGGTAGGCCCGGGGGTCCTGGCTGCAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp TCGATGGGTGTGCCCACGAAGAGCTTGGCCTGGCCCTaGCCCGGTGGCCCGGCAATGAGCACGCCCGCCATG +
Preference number: 6 (lower is better)
Translates to: SMGVPTKSLAWP*PGGPAMSTPAM
Trigger: CATGGCGGGCGTGCTCATTGCCGGGCCACCGGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CCA 72 bp GCGTGCATCCACGATGCAGGTGTGTCGGCAGCGCAGTaGTGTCGCAGGGAGCAGCGGCGCTCGGCCACGCAC +
Preference number: 6 (lower is better)
Translates to: ACIHDAGVSAAQ*CRREQRRSATH
Trigger: GTGCGTGGCCGAGCGCCGCTGCTCCCTGCGACACCACTGCGCTGCCGACACACCTGCATCGTGGATGCACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp GCCGCTCCCCCAGCTCTGGTGGGCTGCGCACAGGGTTaGCCACAGACGGGGCGCGGCATACCATGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: AAPPALVGCAQG*PQTGRGIPWWC
Trigger: ACACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGCGCAGCCCACCAGAGCTGGGGGAGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp GGCAGCGGCATGGCAGGCTGGGGCCTTGGGCCTCGGTaGTCTGGTCCTGCTGGGGTGAGCATCATGGTGCCA +
Preference number: 6 (lower is better)
Translates to: GSGMAGWGLGPR*SGPAGVSIMVP
Trigger: TGGCACCATGATGCTCACCCCAGCAGGACCAGAGCACCGAGGCCCAAGGCCCCAGCCTGCCATGCCGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS GCA 72 bp CTGCAGCAGGTCCGCAGCAAAGCGCTGGGGCTCGTCTaGTCGCTCACAGGCGTCCCGCCGCGAGCAGATGCT +
Preference number: 6 (lower is better)
Translates to: LQQVRSKALGLV*SLTGVPPRADA
Trigger: AGCATCTGCTCGCGGCGGGACGCCTGTGAGCGAGCAGACGAGCCCCAGCGCTTTGCTGCGGACCTGCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp AGCTGCACACACTGCAGCAGGTCCGCAGCAAAGCGCTaGGGCTCGTCTGCTCGCTCACAGGCGTCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SCTHCSRSAAKR*GSSARSQASRR
Trigger: GCGGCGGGACGCCTGTGAGCGAGCAGACGAGCCCCAGCGCTTTGCTGCGGACCTGCTGCAGTGTGTGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 72 bp GGGGCCTTGGGCCTCGGTGCTCTGGTCCTGCTGGGGTaGGCATCATGGTGCCAGGAGCTTCAGCCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: GALGLGALVLLG*ASWCQELQPLR
Trigger: CCGCAAGGGCTGAAGCTCCTGGCACCATGATGCTCACCCCAGCAGGACCAGAGCACCGAGGCCCAAGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684469.1
CDS GCA 72 bp GCAGCGACTGCTGCCGTGACGCGCGTGCATCCACGATaGAGGTGTGTCGGCAGCGCAGTGGTGTCGCAGGGA +
Preference number: 6 (lower is better)
Translates to: AATAAVTRVHPR*RCVGSAVVSQG
Trigger: TCCCTGCGACACCACTGCGCTGCCGACACACCTGCATCGTGGATGCACGCGCGTCACGGCAGCAGTCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp AGGCTGGGGCCTTGGGCCTCGGTGCTCTGGTCCTGCTaGGGTGAGCATCATGGTGCCAGGAGCTTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: RLGPWASVLWSC*GEHHGARSFSP
Trigger: GGGGCTGAAGCTCCTGGCACCATGATGCTCACCCCAGCAGGACCAGAGCACCGAGGCCCAAGGCCCCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp CAGTACTGCCCAGGCCGTGGGGGCAGGACTGCACGCTaGGCGGCGGGTAGCACTTCTCGTTGTCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: QYCPGRGGRTAR*AAGSTSRCPPQ
Trigger: CTGTGGAGGACAACGAGAAGTGCTACCCGCCGCCCAGCGTGCAGTCCTGCCCCCACGGCCTGGGCAGTACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CCA 72 bp CGCAGGGCGGTGACACGGGCCGGGCTGCCCGGGATGTaGAAGAGGCACTCATATCCACGCTGGCCTGACTGT +
Preference number: 6 (lower is better)
Translates to: RRAVTRAGLPGM*KRHSYPRWPDC
Trigger: ACAGTCAGGCCAGCGTGGATATGAGTGCCTCTTCCACATCCCGGGCAGCCCGGCCCGTGTCACCGCCCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp GAGCAGTCCCGCACACACACCTCCACCAGGGCGTCATaGGCACGCACGGAGCTGGCGTCCCCGATCTCACAG +
Preference number: 6 (lower is better)
Translates to: EQSRTHTSTRAS*ARTELASPISQ
Trigger: CTGTGAGATCGGGGACGCCAGCTCCGTGCGTGCCCATGACGCCCTGGTGGAGGTGTGTGTGCGGGACTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp GTCCCTGGGAAACGTTCACGTCTGGGCTGGGTGAGTTaGCCACACAGGCGAGGCCCGCCCAGAGCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: VPGKRSRLGWVS*PHRRGPPRAWA
Trigger: TGCCCAGGCTCTGGGCGGGCCTCGCCTGTGTGGCCAACTCACCCAGCCCAGACGTGAACGTTTCCCAGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp GCCAGGAGGCGCAGTAGTGTATCGAGGAACATGGCGTaGCACGCGGGACCTGCATCAGGGAGGGCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: ARRRSSVSRNMA*HAGPASGRAEA
Trigger: GGCCTCGGCCCTCCCTGATGCAGGTCCCGCGTGCCACGCCATGTTCCTCGATACACTACTGCGCCTCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CAA 72 bp TCGGACTTGCCATCGATGGGTGTGCCCACGAAGAGCTaGGCCTGGCCCTGGCCCGGTGGCCCGGCAATGAGC +
Preference number: 6 (lower is better)
Translates to: SDLPSMGVPTKS*AWPWPGGPAMS
Trigger: GCTCATTGCCGGGCCACCGGGCCAGGGCCAGGCCAAGCTCTTCGTGGGCACACCCATCGATGGCAAGTCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CAA 72 bp TGTCCCTGGGAAACGTTCACGTCTGGGCTGGGTGAGTaGGCCACACAGGCGAGGCCCGCCCAGAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: CPWETFTSGLGE*ATQARPAQSLG
Trigger: GCCCAGGCTCTGGGCGGGCCTCGCCTGTGTGGCCAACTCACCCAGCCCAGACGTGAACGTTTCCCAGGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CAA 90 bp AGCTCATCCGGCCGCTCCCCCAGCTCTGGTGGGCTGCGCACAGGGTaGGCCACAGACGGGGCGCGGCATACCATGGTGGTGTCATTGTAC +
Preference number: 6 (lower is better)
Translates to: SSSGRSPSSGGLRTG*ATDGARHTMVVSLY
Trigger: GTACAATGACACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGCGCAGCCCACCAGAGCTGGGGGAGCGGCCGGATGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 72 bp GAGCTGTCCCTGGGAAACGTTCACGTCTGGGCTGGGTaGGTTGGCCACACAGGCGAGGCCCGCCCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: ELSLGNVHVWAG*VGHTGEARPEP
Trigger: AGGCTCTGGGCGGGCCTCGCCTGTGTGGCCAACTCACCCAGCCCAGACGTGAACGTTTCCCAGGGACAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS GCA 72 bp GGATGCGGCCACTTCGCGTGCCGGCGAATACCACAGTaGGGCCCCGATAGTCATAGGCAGCCACGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: GCGHFACRRIPQ*GPDSHRQPRRS
Trigger: TGACCGCCGTGGCTGCCTATGACTATCGGGGCCGCACTGTGGTATTCGCCGGCACGCGAAGTGGCCGCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp ACACCTCCACCAGGGCGTCATGGGCACGCACGGAGCTaGCGTCCCCGATCTCACAGACGATCTGCTCCGCAC +
Preference number: 6 (lower is better)
Translates to: TPPPGRHGHARS*RPRSHRRSAPH
Trigger: GTGCGGAGCAGATCGTCTGTGAGATCGGGGACGCCAGCTCCGTGCGTGCCCATGACGCCCTGGTGGAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp AGGCTGGGGCCTTGGGCCTCGGTGCTCTGGTCCTGCTaGGGTGAGCATCATGGTGCCAGGAGCTTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RLGPWASVLWSC*GEHHGARSFSP
Trigger: AGGGCTGAAGCTCCTGGCACCATGATGCTCACCCCAGCAGGACCAGAGCACCGAGGCCCAAGGCCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684469.1
CDS CAA 90 bp TGCTCCGCACTGATGTACTCGCTCTCCACAGGGCTGCACAGCACCTaGCCCACGCGCACGCCCAGACGCACGTCTTCGAATCGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: CSALMYSLSTGLHST*PTRTPRRTSSNRRP
Trigger: GGGCCTGCGATTCGAAGACGTGCGTCTGGGCGTGCGCGTGGGCAAGGTGCTGTGCAGCCCTGTGGAGAGCGAGTACATCAGTGCGGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 72 bp CAGGTGGCTTCCCTCGATGCCAATCCAGGTGCCCCCTaGCAGAGGCCCACGGGAGGGGCTCACACGGTAGAA +
Preference number: 6 (lower is better)
Translates to: QVASLDANPGAP*QRPTGGAHTVE
Trigger: TTCTACCGTGTGAGCCCCTCCCGTGGGCCTCTGTCAGGGGGCACCTGGATTGGCATCGAGGGAAGCCACCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp CCACATCACTGCCTGCGTTCAGGTGGCTTCCCTCGATaGCAATCCAGGTGCCCCCTGACAGAGGCCCACGGG +
Preference number: 6 (lower is better)
Translates to: PHHCLRSGGFPR*QSRCPLTEAHG
Trigger: CCCGTGGGCCTCTGTCAGGGGGCACCTGGATTGGCATCGAGGGAAGCCACCTGAACGCAGGCAGTGATGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp CTGCCCGGGATGTGGAAGAGGCACTCATATCCACGCTaGCCTGACTGTGGCTGTGGCAGGTTCCGTGCGGCC +
Preference number: 6 (lower is better)
Translates to: LPGMWKRHSYPR*PDCGCGRFRAA
Trigger: GGCCGCACGGAACCTGCCACAGCCACAGTCAGGCCAGCGTGGATATGAGTGCCTCTTCCACATCCCGGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp TGGAGAGCTGTCCCTGGGAAACGTTCACGTCTGGGCTaGGTGAGTTGGCCACACAGGCGAGGCCCGCCCAGA +
Preference number: 6 (lower is better)
Translates to: WRAVPGKRSRLG*VSWPHRRGPPR
Trigger: TCTGGGCGGGCCTCGCCTGTGTGGCCAACTCACCCAGCCCAGACGTGAACGTTTCCCAGGGACAGCTCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp GGAGGGCCGAGGCCTATTTCACCCAGAAGTCTCCCCTaGTCTCAGCAGGATCCCCGCCTAGCTCCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: GGPRPISPRSLP*SQQDPRLAPAS
Trigger: GGAGGCTGGAGCTAGGCGGGGATCCTGCTGAGACCAGGGGAGACTTCTGGGTGAAATAGGCCTCGGCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp CATGAGCCAGGAGGCGCAGTAGTGTATCGAGGAACATaGCGTGGCACGCGGGACCTGCATCAGGGAGGGCCG +
Preference number: 6 (lower is better)
Translates to: HEPGGAVVYRGT*RGTRDLHQGGP
Trigger: CGGCCCTCCCTGATGCAGGTCCCGCGTGCCACGCCATGTTCCTCGATACACTACTGCGCCTCCTGGCTCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 72 bp TTGAGGATCTTGGGGTCGGTGCAGCGACTGCTGCCGTaGCGCGCGTGCATCCACGATGCAGGTGTGTCGGCA +
Preference number: 6 (lower is better)
Translates to: LRILGSVQRLLP*RACIHDAGVSA
Trigger: TGCCGACACACCTGCATCGTGGATGCACGCGCGTCACGGCAGCAGTCGCTGCACCGACCCCAAGATCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp GGTCCACCAGGATCTTGCGGATGCGGCCACTTCGCGTaGCGGCGAATACCACAGTGCGGCCCCGATAGTCAT +
Preference number: 6 (lower is better)
Translates to: GPPGSCGCGHFA*RRIPQCGPDSH
Trigger: ATGACTATCGGGGCCGCACTGTGGTATTCGCCGGCACGCGAAGTGGCCGCATCCGCAAGATCCTGGTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp ATGGCAGGCAGCGTCAGCAGGCTGTCCGAGTACACCTaGAGTGTCCCTGGCGAGAACTCGAAGCCACCTGCC +
Preference number: 6 (lower is better)
Translates to: MAGSVSRLSEYT*SVPGENSKPPA
Trigger: GGCAGGTGGCTTCGAGTTCTCGCCAGGGACACTGCAGGTGTACTCGGACAGCCTGCTGACGCTGCCTGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp CCGACCGACACAGCCACATCACTGCCTGCGTTCAGGTaGCTTCCCTCGATGCCAATCCAGGTGCCCCCTGAC +
Preference number: 6 (lower is better)
Translates to: PTDTATSLPAFR*LPSMPIQVPPD
Trigger: GTCAGGGGGCACCTGGATTGGCATCGAGGGAAGCCACCTGAACGCAGGCAGTGATGTGGCTGTGTCGGTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp GCACAGGGTTGGCCACAGACGGGGCGCGGCATACCATaGTGGTGTCATTGTACACCAGGCAGCCGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: AQGWPQTGRGIP*WCHCTPGSRSP
Trigger: GGGAGAACGGCTGCCTGGTGTACAATGACACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp CCTGCCCAAGGGCCTTCAGGTGTGTGTACACCTCAATaGAGGGGCAGGTTTGGCAGCCCTGCCTCCTACCCG +
Preference number: 6 (lower is better)
Translates to: PAQGPSGVCTPQ*RGRFGSPASYP
Trigger: CGGGTAGGAGGCAGGGCTGCCAAACCTGCCCCTCCATTGAGGTGTACACACACCTGAAGGCCCTTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CAA 90 bp CCTCCATACTTGGCCCGGATTCGGGGTTCACGGACAGTGGCCAGGTaGGTGCCTGTGACCGTCAGGAGGGTCCCACCGCTGTTGATGCTC +
Preference number: 6 (lower is better)
Translates to: PPYLARIRGSRTVAR*VPVTVRRVPPLLML
Trigger: GAGCATCAACAGCGGTGGGACCCTCCTGACGGTCACAGGCACCAACCTGGCCACTGTCCGTGAACCCCGAATCCGGGCCAAGTATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 90 bp CCCAAGGGCCTTCAGGTGTGTGTACACCTCAATGGAGGGGCAGGTTaGGCAGCCCTGCCTCCTACCCGGCCCTGGCAAACAAACAGCAGC +
Preference number: 6 (lower is better)
Translates to: PKGLQVCVHLNGGAG*AALPPTRPWQTNSS
Trigger: GCTGCTGTTTGTTTGCCAGGGCCGGGTAGGAGGCAGGGCTGCCAAACCTGCCCCTCCATTGAGGTGTACACACACCTGAAGGCCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 72 bp CGAAGCCGAACATGTCGGCATCCTCCTCGTTGGCCATaGGCCGACGGCTGGACAGTGTGGGGAAGTACTCGG +
Preference number: 6 (lower is better)
Translates to: RSRTCRHPPRWP*ADGWTVWGSTR
Trigger: CCGAGTACTTCCCCACACTGTCCAGCCGTCGGCTCATGGCCAACGAGGAGGATGCCGACATGTTCGGCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS GCA 72 bp GGGACCTGGGACATGGTGACAGACACATTGCGGGGCTaGACAGTCAGCTGCACACACTGCAGCAGGTCCGCA +
Preference number: 6 (lower is better)
Translates to: GTWDMVTDTLRG*TVSCTHCSRSA
Trigger: TGCGGACCTGCTGCAGTGTGTGCAGCTGACTGTGCAGCCCCGCAATGTGTCTGTCACCATGTCCCAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp GGCATCTTCATGGGCCCTTGTGGACCCAACCCAATGTaGCCTCTTCAGAAAGGCTCCTGGGGAGCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: GIFMGPCGPNPM*PLQKGSWGAPS
Trigger: GCTGGGCGCTCCCCAGGAGCCTTTCTGAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp CCGTGCGGCCAGGGTGATGGGTTTTACCACTCCCACTaGCACGTAGATCTGCGTGGAGGGCAGGATCTGTGG +
Preference number: 6 (lower is better)
Translates to: PCGQGDGFYHSH*HVDLRGGQDLW
Trigger: CCACAGATCCTGCCCTCCACGCAGATCTACGTGCCAGTGGGAGTGGTAAAACCCATCACCCTGGCCGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp CCAGGCAGCCGTTCTCCCTCTCAATGCCTCCATACTTaGCCCGGATTCGGGGTTCACGGACAGTGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: PGSRSPSQCLHT*PGFGVHGQWPG
Trigger: ACCTGGCCACTGTCCGTGAACCCCGAATCCGGGCCAAGTATGGAGGCATTGAGAGGGAGAACGGCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp CAGGGTTGGCCACAGACGGGGCGCGGCATACCATGGTaGTGTCATTGTACACCAGGCAGCCGTTCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: QGWPQTGRGIPW*CHCTPGSRSPS
Trigger: AGAGGGAGAACGGCTGCCTGGTGTACAATGACACCACCATGGTATGCCGCGCCCCGTCTGTGGCCAACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp GGGGCAGGTTTGGCAGCCCTGCCTCCTACCCGGCCCTaGCAAACAAACAGCAGCTCTGCTCCTGTAACCAGA +
Preference number: 6 (lower is better)
Translates to: GAGLAALPPTRP*QTNSSSAPVTR
Trigger: TCTGGTTACAGGAGCAGAGCTGCTGTTTGTTTGCCAGGGCCGGGTAGGAGGCAGGGCTGCCAAACCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CAA 72 bp CTGATGTACTCGCTCTCCACAGGGCTGCACAGCACCTaGCCCACGCGCACGCCCAGACGCACGTCTTCGAAT +
Preference number: 6 (lower is better)
Translates to: LMYSLSTGLHST*PTRTPRRTSSN
Trigger: ATTCGAAGACGTGCGTCTGGGCGTGCGCGTGGGCAAGGTGCTGTGCAGCCCTGTGGAGAGCGAGTACATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 72 bp TTCACCTCAGGGTTGGTGAGCTGGGCGCGGTTGATGTaGATGATGATGGGAGCGCTGCCAGGGCTCTGCCCG +
Preference number: 6 (lower is better)
Translates to: FTSGLVSWARLM*MMMGALPGLCP
Trigger: CGGGCAGAGCCCTGGCAGCGCTCCCATCATCATCAACATCAACCGCGCCCAGCTCACCAACCCTGAGGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 72 bp ACCAGGCAGCCGTTCTCCCTCTCAATGCCTCCATACTaGGCCCGGATTCGGGGTTCACGGACAGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TRQPFSLSMPPY*ARIRGSRTVAR
Trigger: CCTGGCCACTGTCCGTGAACCCCGAATCCGGGCCAAGTATGGAGGCATTGAGAGGGAGAACGGCTGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 72 bp AAGGAGGTGGAGTTGAGCACAAGCAGGGAGCGCACGTaGTCCATGACGAAGCCCAGCTCATCCGGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: KEVELSTSRERT*SMTKPSSSGRS
Trigger: GGAGCGGCCGGATGAGCTGGGCTTCGTCATGGACAACGTGCGCTCCCTGCTTGTGCTCAACTCCACCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 72 bp TCCAGGCCTGCAGCACAAGTGGGACCTGGGACATGGTaGCAGACACATTGCGGGGCTGCACAGTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: SRPAAQVGPGTW*QTHCGAAQSAA
Trigger: TGCAGCTGACTGTGCAGCCCCGCAATGTGTCTGTCACCATGTCCCAGGTCCCACTTGTGCTGCAGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp CAGAGCCTGGGCATGGGGTCCACTGTAGGTCCTGCCTaGCCAAGGGCCTTCAGGTGTGTGTACACCTCAATG +
Preference number: 6 (lower is better)
Translates to: QSLGMGSTVGPA*PRAFRCVYTSM
Trigger: CATTGAGGTGTACACACACCTGAAGGCCCTTGGGCAGGCAGGACCTACAGTGGACCCCATGCCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS GCA 72 bp GGACATACCTCCGCCCCTGCTGCAGCACACTTAACCTaGCATAGTCCCCTGCAATGTGCCACAGCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: GHTSAPAAAHLT*HSPLQCATALP
Trigger: TGGGAGGGCTGTGGCACATTGCAGGGGACTATGGCAGGTTAAGTGTGCTGCAGCAGGGGCGGAGGTATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503363.1
CDS CCA 72 bp CTGTCCTCACGCTGCATCATGCTGGATGATCACAGCTaGGGCTCAGCTGCTCAGGGCCATCGTGTCCACCAC +
Preference number: 6 (lower is better)
Translates to: LSSRCIMLDDHS*GSAAQGHRVHH
Trigger: GTGGTGGACACGATGGCCCTGAGCAGCTGAGCCCCAGCTGTGATCATCCAGCATGATGCAGCGTGAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000503234.5
CDS CCA 72 bp GTGCTCAGGACAAAGCTCCCCATGGCCCACCGCCCATaGCACAAGCGGACCCCATACTACGCAACTCCAAGT +
Preference number: 6 (lower is better)
Translates to: VLRTKLPMAHRP*HKRTPYYATPS
Trigger: ACTTGGAGTTGCGTAGTATGGGGTCCGCTTGTGCCATGGGCGGTGGGCCATGGGGAGCTTTGTCCTGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CAA 72 bp TGGTACACGAAGCCGAACATGTCGGCATCCTCCTCGTaGGCCATGAGCCGACGGCTGGACAGTGTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: WYTKPNMSASSS*AMSRRLDSVGK
Trigger: CTTCCCCACACTGTCCAGCCGTCGGCTCATGGCCAACGAGGAGGATGCCGACATGTTCGGCTTCGTGTACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CAA 72 bp TTGACACGGCCCTCCAGGAAGGCGCAGTCAGCCACGTaGTGTGTGCACACGTGGCGGTATTTGCACCAGTGG +
Preference number: 6 (lower is better)
Translates to: LTRPSRKAQSAT*CVHTWRYLHQW
Trigger: CCACTGGTGCAAATACCGCCACGTGTGCACACACAACGTGGCTGACTGCGCCTTCCTGGAGGGCCGTGTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 72 bp GCCACAGACGGGGCGCGGCATACCATGGTGGTGTCATaGTACACCAGGCAGCCGTTCTCCCTCTCAATGCCT +
Preference number: 6 (lower is better)
Translates to: ATDGARHTMVVS*YTRQPFSLSMP
Trigger: AGGCATTGAGAGGGAGAACGGCTGCCTGGTGTACAATGACACCACCATGGTATGCCGCGCCCCGTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS TCA 72 bp CTGACTGTGGCTGTGGCAGGTTCCGTGCGGCCAGGGTaGTGGGTTTTACCACTCCCACTGGCACGTAGATCT +
Preference number: 6 (lower is better)
Translates to: LTVAVAGSVRPG*WVLPLPLARRS
Trigger: AGATCTACGTGCCAGTGGGAGTGGTAAAACCCATCACCCTGGCCGCACGGAACCTGCCACAGCCACAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp CCCAAAGTCAGACACCTGTCCGAGGGTTCCCAGGCCTaGCCTCAGAGAGTGAAAGGACGGCAGCTAGTCTCT +
Preference number: 6 (lower is better)
Translates to: PKVRHLSEGSQA*PQRVKGRQLVS
Trigger: AGAGACTAGCTGCCGTCCTTTCACTCTCTGAGGCCAGGCCTGGGAACCCTCGGACAGGTGTCTGACTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CAA 90 bp AACTCATCCTGGTACACGAAGCCGAACATGTCGGCATCCTCCTCGTaGGCCATGAGCCGACGGCTGGACAGTGTGGGGAAGTACTCGGAC +
Preference number: 6 (lower is better)
Translates to: NSSWYTKPNMSASSS*AMSRRLDSVGKYSD
Trigger: GTCCGAGTACTTCCCCACACTGTCCAGCCGTCGGCTCATGGCCAACGAGGAGGATGCCGACATGTTCGGCTTCGTGTACCAGGATGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000684469.1
CDS CAA 90 bp TCATTGTACACCAGGCAGCCGTTCTCCCTCTCAATGCCTCCATACTaGGCCCGGATTCGGGGTTCACGGACAGTGGCCAGGTTGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SLYTRQPFSLSMPPY*ARIRGSRTVARLVP
Trigger: AGGCACCAACCTGGCCACTGTCCGTGAACCCCGAATCCGGGCCAAGTATGGAGGCATTGAGAGGGAGAACGGCTGCCTGGTGTACAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CCA 72 bp TGGGTTTTACCACTCCCACTGGCACGTAGATCTGCGTaGAGGGCAGGATCTGTGGGCAGTCCTCAGACACGT +
Preference number: 6 (lower is better)
Translates to: WVLPLPLARRSA*RAGSVGSPQTR
Trigger: ACGTGTCTGAGGACTGCCCACAGATCCTGCCCTCCACGCAGATCTACGTGCCAGTGGGAGTGGTAAAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 90 bp GCTGCCTCTACAACCAGAAATTTCCCCTGGCATCTTCATGGGCCCTaGTGGACCCAACCCAATGTGCCCTCTTCAGAAAGGCTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AASTTRNFPWHLHGP*WTQPNVPSSERLLG
Trigger: CCCCAGGAGCCTTTCTGAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAATTTCTGGTTGTAGAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 72 bp CTGGCCTCAGAGAGTGAAAGGACGGCAGCTAGTCTCTaGAGGTCAGGGCAGTGCAGATATTGGCCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: LASESERTAASL*RSGQCRYWPKV
Trigger: GACCTTGGGCCAATATCTGCACTGCCCTGACCTTCAGAGACTAGCTGCCGTCCTTTCACTCTCTGAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS GCA 72 bp TGTCATTGTACACCAGGCAGCCGTTCTCCCTCTCAATaGCTCCATACTTGGCCCGGATTCGGGGTTCACGGA +
Preference number: 6 (lower is better)
Translates to: CHCTPGSRSPSQ*LHTWPGFGVHG
Trigger: TCCGTGAACCCCGAATCCGGGCCAAGTATGGAGGCATTGAGAGGGAGAACGGCTGCCTGGTGTACAATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS GCA 72 bp CGTGTCACAGTCCAGCCCCTTCACCGGCACCTCAGGTaGATTCTCATTCTCAGGGTTCACACAGTTCAGGGT +
Preference number: 6 (lower is better)
Translates to: RVTVQPLHRHLR*ILILRVHTVQG
Trigger: ACCCTGAACTGTGTGAACCCTGAGAATGAGAATGCACCTGAGGTGCCGGTGAAGGGGCTGGACTGTGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393409.3
ENST00000503234.5
CDS GCA 72 bp GAACCGCCTCCTGTCCCACCTCAGGGCCTTTGCAACTaGTGCCTCTACAACCAGAAATTTCCCCTGGCATCT +
Preference number: 6 (lower is better)
Translates to: EPPPVPPQGLCN*CLYNQKFPLAS
Trigger: AGATGCCAGGGGAAATTTCTGGTTGTAGAGGCAGCAGTTGCAAAGGCCCTGAGGTGGGACAGGAGGCGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 72 bp CAACTATGGTGTGTCATGGATACTGACATACCCACCTaGGGAGGCTTGCCCACCCAGGGAGGTTCACCAGCA +
Preference number: 6 (lower is better)
Translates to: QLWCVMDTDIPT*GGLPTQGGSPA
Trigger: TGCTGGTGAACCTCCCTGGGTGGGCAAGCCTCCTCAGGTGGGTATGTCAGTATCCATGACACACCATAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 72 bp TCTCCAGGGCTGCCAGGATCTCATCCTTGTACTTGGTaGTGTAGGAGTAGATCTCGTGCAAGGCGCTCATGC +
Preference number: 6 (lower is better)
Translates to: SPGLPGSHPCTW*CRSRSRARRSC
Trigger: GCATGAGCGCCTTGCACGAGATCTACTCCTACATCACCAAGTACAAGGATGAGATCCTGGCAGCCCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393409.3
ENST00000503234.5
ENST00000505278.1
CDS TCA 72 bp TTACTCTGGGACACAACTATGGTGTGTCATGGATACTaGCATACCCACCTGAGGAGGCTTGCCCACCCAGGG +
Preference number: 6 (lower is better)
Translates to: LLWDTTMVCHGY*HTHLRRLAHPG
Trigger: CCCTGGGTGGGCAAGCCTCCTCAGGTGGGTATGTCAGTATCCATGACACACCATAGTTGTGTCCCAGAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp ACCAGAAATTTCCCCTGGCATCTTCATGGGCCCTTGTaGACCCAACCCAATGTGCCCTCTTCAGAAAGGCTC +
Preference number: 6 (lower is better)
Translates to: TRNFPWHLHGPL*TQPNVPSSERL
Trigger: GAGCCTTTCTGAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAATTTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp TGCCTCTACAACCAGAAATTTCCCCTGGCATCTTCATaGGCCCTTGTGGACCCAACCCAATGTGCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: CLYNQKFPLASS*ALVDPTQCALF
Trigger: GAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAATTTCTGGTTGTAGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp CGAAGTCCACAGACGCAAACTTCTTCCCTGTCTCCTTaGACTTTAGGTAGAGTTTCACCACCCGCTGGTCTC +
Preference number: 6 (lower is better)
Translates to: RSPQTQTSSLSP*TLGRVSPPAGL
Trigger: GAGACCAGCGGGTGGTGAAACTCTACCTAAAGTCCAAGGAGACAGGGAAGAAGTTTGCGTCTGTGGACTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393409.3
CDS CAA 72 bp ACAACCAGAAATTTCCCCTGGCATCTTCATGGGCCCTaGTGGACCCAACCCAATGTGCCCTCTTCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: TTRNFPWHLHGP*WTQPNVPSSER
Trigger: CCTTTCTGAAGAGGGCACATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAATTTCTGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS CCA 72 bp TTTGCAACTGCTGCCTCTACAACCAGAAATTTCCCCTaGCATCTTCATGGGCCCTTGTGGACCCAACCCAAT +
Preference number: 6 (lower is better)
Translates to: FATAASTTRNFP*HLHGPLWTQPN
Trigger: ATTGGGTTGGGTCCACAAGGGCCCATGAAGATGCCAGGGGAAATTTCTGGTTGTAGAGGCAGCAGTTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503234.5
CDS TCA 72 bp AAAAGGGGTGCAGATCCGGATGGAGAGCCATTAATGTaGCAGGAAGCCTTTGAGGGTTTCCCAAAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: KRGADPDGEPLM*QEAFEGFPKSD
Trigger: GTCTGACTTTGGGAAACCCTCAAAGGCTTCCTGTCACATTAATGGCTCTCCATCCGGATCTGCACCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503234.5