Pregenerated sensors for PLSCR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000163746Ensembl transcript IDs: ENST00000336685.6, ENST00000463633.5, ENST00000474418.1, ENST00000497985.5, ENST00000610787.5, ENST00000613069.4
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGGCCTGGGAGCCCAGGTaGTCAGCCTGTTTCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQAWEPR*SACFPV Trigger: CACTGGGAAACAGGCTGACCACCTGGGCTCCCAGGC...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR CCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCATGCTGACGTCCTaGGTAGAAGGCCTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPVMLTS*VEGLGA Trigger: GGCTCCCAGGCCTTCTACCCAGGACGTCAGCATGAC...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR GCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGCACCCGCAATACAGCTaGACACGATACATGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQHPQYS*TRYMDH Trigger: GTGGTCCATGTATCGTGTGCAGCTGTATTGCGGGTG...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR TCA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCTGGATTTCTATCTCCTaGAGGCAGCAGGGGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: PSQRSGIINPLPHSDIPVWISIS*RQQGQQ Trigger: TTGTTGCCCCTGCTGCCTTCAGGAGATAGAAATCCA...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR TCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTGGATTTCTATCTCCTaGAGGCAGCAGGGGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQWISIS*RQQGQQ Trigger: TTGTTGCCCCTGCTGCCTTCAGGAGATAGAAATCCA...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR GCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCACACCCGCAATACAGCTaGACACGATACATGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPHPQYS*TRYMDH Trigger: GTGGTCCATGTATCGTGTGCAGCTGTATTGCGGGTG...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR TCA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCCATTCACTTCTATTTTaGGGGTGGTTCACTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQRSGIINPLPHSDIPVHSLLF*GWFTGR Trigger: CCTCCCAGTGAACCACCCTCAAAATAGAAGTGAATG...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336685.6 |
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| CDS-3UTR TCA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCTCCACTCCCACACTCTaGCATTCCAGTCATTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PSQRSGIINPLPHSDIPVSTPTL*HSSHYL Trigger: TAGGTAATGACTGGAATGTCAGAGTGTGGGAGTGGA...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR TCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCCACTCCCACACTCTaGCATTCCAGTCATTACCTA | + |
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Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQSTPTL*HSSHYL Trigger: TAGGTAATGACTGGAATGTCAGAGTGTGGGAGTGGA...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR CCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAATGTCCGGGAGGTCCTaGGAGGTGAATTTGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPMSGRS*EVNLKR Trigger: CCTTTTCAAATTCACCTCCCAGGACCTCCCGGACAT...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613069.4 |
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| CDS-3UTR GCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGAAAAACCCAGACCAGTaGTTAGAAATCCTGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQKNPDQ*LEILPT Trigger: GGTTGGCAGGATTTCTAAGCACTGGTCTGGGTTTTT...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR GCA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCAAAAACCCAGACCAGTaGTTAGAAATCCTGCCAACC | + |
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Preference number: 4 (lower is better) Translates to: PSQRSGIINPLPHSDIPVKNPDQ*LEILPT Trigger: GGTTGGCAGGATTTCTAAGCACTGGTCTGGGTTTTT...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR CCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTTGAGGGTGGTTCACTaGGAGGTGAATTTGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQLRVVH*EVNLKR Trigger: CCTTTTCAAATTCACCTCCCAGTGAACCACCCTCAA...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336685.6 |
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| CDS-3UTR CCA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCGCCTGGGAGCCCAGGTaGTCAGCCTGTTTCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFAWEPR*SACFPV Trigger: CACTGGGAAACAGGCTGACCACCTGGGCTCCCAGGC...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR CCA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCCCCTTCAGGTCTACCTaGCTGATTTTGAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSQRSGIINPLPHSDIPVPFRST*LILNRN Trigger: ATTCCTGTTCAAAATCAGCCAGGTAGACCTGAAGGG...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR CCA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCTATGTCCGGGAGGTCTaGAGGAATTTAAGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSQRSGIINPLPHSDIPVYVREV*RNLSRR Trigger: TCTTCTGCTTAAATTCCTCCAGACCTCCCGGACATA...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS-3UTR GCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAAAAAACCCAGACCAGTaGTTAGAAATCCTGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPKNPDQ*LEILPT Trigger: GGTTGGCAGGATTTCTAAGCACTGGTCTGGGTTTTT...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR CCA 90 bp | TTCTTTCAGGGTAATTCTTATGGCCACAGTTCAAAATACATGTATTCAATGAGGGTCATGCTGACGTCCTaGGTAGAAGGCCTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: FFQGNSYGHSSKYMYSMRVMLTS*VEGLGA Trigger: GGCTCCCAGGCCTTCTACCCAGGACGTCAGCATGAC...CCTCATTGAATACATGTATTTTGAACTGTGGCCATAAGAATTACCCTGAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR CCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCACCCTTCAGGTCTACCTaGCTGATTTTGAACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPPFRST*LILNRN Trigger: ATTCCTGTTCAAAATCAGCCAGGTAGACCTGAAGGG...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR TCA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCAAAACATGTAGTCAATaGGGAAACAGGCACCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQRSGIINPLPHSDIPVKTCSQ*GNRHQS Trigger: TGATTGGTGCCTGTTTCCTCATTGACTACATGTTTT...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR GCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCACGAAGTTTTCAGGAGTaGCCAGTACTGGAATTTACA | + |
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Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPRSFQE*PVLEFT Trigger: TGTAAATTCCAGTACTGGGCACTCCTGAAAACTTCG...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS-3UTR TCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAAAAACATGTAGTCAATaGGGAAACAGGCACCAATCA | + |
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Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPKTCSQ*GNRHQS Trigger: TGATTGGTGCCTGTTTCCTCATTGACTACATGTTTT...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000336685.6 ENST00000497985.5 ENST00000613069.4 |
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| CDS-3UTR TCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGAAGTTCAGCAAAGGTTaGATAATTCCAAGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQKFSKG*IIPSGF Trigger: AAACCCACTTGGAATTATTCAACCTTTGCTGAACTT...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS-3UTR GCA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTTCCACAGATAGTGTaGGAGTTTTTCCTTACATCT | + |
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Preference number: 4 (lower is better) Translates to: LPSQRSGIINPLPHSDIPVPQIV*EFFLTS Trigger: AGATGTAAGGAAAAACTCGCACACTATCTGTGGAAC...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000336685.6 ENST00000613069.4 |
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| CDS-3UTR GCA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGATCTCATATATATCTTaGGAAGTTTTCAGGAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CLAKDPESLIHSHTLTFQISYIS*EVFRSA Trigger: GGCACTCCTGAAAACTTCGCAAGATATATATGAGAT...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS-3UTR CCA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCCCCTTCAGGTCTACCTaGCTGATTTTGAACAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFPFRST*LILNRN Trigger: ATTCCTGTTCAAAATCAGCCAGGTAGACCTGAAGGG...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR TCA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCAATACATGTATTCAATaGGGAAAGTTGCTCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFNTCIQ*GKLLQA Trigger: TGCTTGGAGCAACTTTCCTCATTGAATACATGTATT...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR GCA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCTTCAATGAGGAAAGTTaGTCCAAGCATCAATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFFNEES*SKHQCF Trigger: AAAGCATTGATGCTTGGAGCAACTTTCCTCATTGAA...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR CCA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCAGATCAAATGGAAACTaGATCCCAAATTTCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFRSNGN*IPNFSP Trigger: TGGTGAGAAATTTGGGATCCAGTTTCCATTTGATCT...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR GCA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCATTTTCAGTGAAAGTTaGTTAGTTTTGTTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFIFSES*LVLLRA Trigger: AGCCCTCAACAAAACTAAGCAACTTTCACTGAAAAT...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR CAA 90 bp | TGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGCAGGCAGGACACCCCTaGTCATTCGAACGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: CLAKDPESLIHSHTLTFQQAGHP*SFERFW Trigger: CCAGAACCGTTCGAATGACAAGGGGTGTCCTGCCTG...CTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS-3UTR CAA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCACATTCACTTCTATTTaGAGGGTGGTTCACTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PSQRSGIINPLPHSDIPVTFTSI*RVVHWE Trigger: CTCCCAGTGAACCACCCTCAAAATAGAAGTGAATGT...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336685.6 |
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| CDS-3UTR CAA 90 bp | CCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGTCGATCTCATATATATCTaGCGAAGTTTTCAGGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: PSQRSGIINPLPHSDIPVDLIYI*RSFQEC Trigger: GCACTCCTGAAAACTTCGCAAGATATATATGAGATC...GACTGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS-3UTR CAA 90 bp | TTGCCTAGCCAAAGATCCGGAATCATTAATCCACTCCCACACTCTGACATTCCAGAAGTTCAGCAAAGGTaGAATAATTCCAAGTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LPSQRSGIINPLPHSDIPEVQQR*NNSKWV Trigger: AACCCACTTGGAATTATTCAACCTTTGCTGAACTTC...TGGAATGTCAGAGTGTGGGAGTGGATTAATGATTCCGGATCTTTGGCTAGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS TCA 90 bp | AGTGGGTTCACTGTAGAAACTTGCAGATCATTTGTAGGTCAACTCTaGTCCCAGTTTTATGGATCAAAATATGAGCCTCAGAGATGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SGFTVETCRSFVGQL*SQFYGSKYEPQRCC Trigger: ACAACATCTCTGAGGCTCATATTTTGATCCATAAAACTGGGATCAGAGTTGACCTACAAATGATCTGCAAGTTTCTACAGTGAACCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474418.1 |
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| CDS GCA 90 bp | AGGAATTTAAGCAGAAGAGTGAGTTCCATGATCTCATATATATCTTaGGAAGTTTTCAGGAGTGCCCAGTACTGGAATTTACAAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: RNLSRRVSSMISYIS*EVFRSAQYWNLQGK Trigger: TTTCCCTTGTAAATTCCAGTACTGGGCACTCCTGAAAACTTCGCAAGATATATATGAGATCATGGAACTCACTCTTCTGCTTAAATTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS-3UTR CAA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCGAAAGTTGCTTAGTTTaGTTGAGGGCTGGCAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFESCLV*LRAGKN Trigger: ATTTTTGCCAGCCCTCAACAAAACTAAGCAACTTTC...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR CAA 90 bp | CACCATTGGTTAATATTCCCCTTACAAATCCAGAGTACTGTTTTGAAATCTTTCCCAAATTTCTCACCATaGGTTAATATTCCCCTTACA | + |
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Preference number: 5 (lower is better) Translates to: HHWLIFPLQIQSTVLKSFPNFSP*VNIPLT Trigger: TGTAAGGGGAATATTAACCAATGGTGAGAAATTTGG...GAAAGATTTCAAAACAGTACTCTGGATTTGTAAGGGGAATATTAACCAATGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS-3UTR CAA 90 bp | TTCTTTCAGGGTAATTCTTATGGCCACAGTTCAAAATACATGTATTCAATGAGGAGTTGCTTAGTTTTGTaGAGGGCTGGCAAAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: FFQGNSYGHSSKYMYSMRSCLVL*RAGKNK Trigger: TTTATTTTTGCCAGCCCTCAACAAAACTAAGCAACT...CCTCATTGAATACATGTATTTTGAACTGTGGCCATAAGAATTACCCTGAAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000463633.5 |
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| CDS CAA 90 bp | GAGGAATTTAAGCAGAAGAGTGAGTTCCATGATCTCATATATATCTaGCGAAGTTTTCAGGAGTGCCCAGTACTGGAATTTACAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: EEFKQKSEFHDLIYI*RSFQECPVLEFTRE Trigger: TTCCCTTGTAAATTCCAGTACTGGGCACTCCTGAAAACTTCGCAAGATATATATGAGATCATGGAACTCACTCTTCTGCTTAAATTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS GCA 72 bp | AGCAGAAGAGTGAGTTCCATGATCTCATATATATCTTaGGAAGTTTTCAGGAGTGCCCAGTACTGGAATTTA | + |
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Preference number: 6 (lower is better) Translates to: SRRVSSMISYIS*EVFRSAQYWNL Trigger: TAAATTCCAGTACTGGGCACTCCTGAAAACTTCGCAAGATATATATGAGATCATGGAACTCACTCTTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497985.5 |
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| CDS TCA 72 bp | ACTGTAGAAACTTGCAGATCATTTGTAGGTCAACTCTaGTCCCAGTTTTATGGATCAAAATATGAGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TVETCRSFVGQL*SQFYGSKYEPQ Trigger: CTGAGGCTCATATTTTGATCCATAAAACTGGGATCAGAGTTGACCTACAAATGATCTGCAAGTTTCTACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474418.1 |
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| CDS TCA 72 bp | GCTTTTATACCTGTGAAAGTGAAAGTAAACCCACCATaGTCTAAAGTGATCTATATGAAGATTGTGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: AFIPVKVKVNPP*SKVIYMKIVAC Trigger: GCATGCCACAATCTTCATATAGATCACTTTAGATCATGGTGGGTTTACTTTCACTTTCACAGGTATAAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610787.5 |
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| CDS TCA 72 bp | TTATCCATTAGATTTATACATGGAAGAGCTATAAAGTaGATCCAGGTATCCTGGGAGGTGAATTTGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSIRFIHGRAIK*IQVSWEVNLKR Trigger: CCTTTTCAAATTCACCTCCCAGGATACCTGGATTCACTTTATAGCTCTTCCATGTATAAATCTAATGGATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474418.1 |
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| CDS TCA 72 bp | AGGTCAACTCTGATCCCAGTTTTATGGATCAAAATATaGGCCTCAGAGATGTTGTGTTATCCATTAGATTTA | + |
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Preference number: 6 (lower is better) Translates to: RSTLIPVLWIKI*ASEMLCYPLDL Trigger: TAAATCTAATGGATAACACAACATCTCTGAGGCTCATATTTTGATCCATAAAACTGGGATCAGAGTTGACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474418.1 |
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