RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLPPR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000117600

Ensembl transcript IDs: ENST00000370184.1, ENST00000370185.8, ENST00000370185.9, ENST00000457765.6

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAATGTAACCCACAATGTCAAGTTTTGGCTCAGATTTCTTGTTTaGAAATTCACAGCAGTATATTTTGCTCAAGGAATGTCAATTGTT +
Preference number: 1 (lower is better)
Translates to: GNVTHNVKFWLRFLV*KFTAVYFAQGMSIV
Trigger: AACAATTGACATTCCTTGAGCAAAATATACTGCTGTGAATTTGCAAACAAGAAATCTGAGCCAAAACTTGACATTGTGGGTTACATTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR TCA 90 bp TTTAACAAGGAATTGCACACCACTATTTCACAGCTAAATAGAGTTTaGGAGTTTACATGGTATATGTACTATAATAATCAGCACCACCCG +
Preference number: 1 (lower is better)
Translates to: FNKELHTTISQLNRV*EFTWYMYYNNQHHP
Trigger: CGGGTGGTGCTGATTATTATAGTACATATACCATGTAAACTCTCAAACTCTATTTAGCTGTGAAATAGTGGTGTGCAATTCCTTGTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACAGCACCACCCGTATTaGGCTGTAGGTGCAGATTCT +
Preference number: 2 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPQHHPY*AVGADS
Trigger: AGAATCTGCACCTACAGCTCAATACGGGTGGTGCTG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAATACTGCATGGCCTCTaGTGTAGGGAAAACGTGTGT +
Preference number: 2 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPILHGL*CRENVC
Trigger: ACACACGTTTTCCCTACAGCAGAGGCCATGCAGTAT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGCTTTTCCCTCTCCTTaGTGTGAGATCTGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPAFPSP*CEICKF
Trigger: AAACTTGCAGATCTCACATCAAGGAGAGGGAAAAGC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAAAACGTGTGTGTTCTaGGTTCCCACAGCTCACTAT +
Preference number: 2 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPKTCVF*VPTAHY
Trigger: ATAGTGAGCTGTGGGAACCCAGAACACACACGTTTT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGGTAGAATCAACATATaGTCTTTTGCGAGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPGRINI*SFASSP
Trigger: AGGGCTACTCGCAAAAGACCATATGTTGATTCTACC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACAGCACCACCCGTATTaGGCTGTAGGTGCAGATTCT +
Preference number: 2 (lower is better)
Translates to: RFRDESNLTSVALIYWSSQHHPY*AVGADS
Trigger: AGAATCTGCACCTACAGCTCAATACGGGTGGTGCTG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATCTTTAACAAGGAATTaGACACCACTATTTCACAGC +
Preference number: 2 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPSLTRN*TPLFHS
Trigger: GCTGTGAAATAGTGGTGTGCAATTCCTTGTTAAAGA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGACAATCTAGCTTGGTaGGACTTCCCAATTCGCTGG +
Preference number: 2 (lower is better)
Translates to: RFRDESNLTSVALIYWSSDNLAW*DFPIRW
Trigger: CCAGCGAATTGGGAAGTCTCACCAAGCTAGATTGTC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACCACTACAGAGAAGCTaGGGGGTGTCCTATTCTAAC +
Preference number: 2 (lower is better)
Translates to: RFRDESNLTSVALIYWSSPLQRS*GVSYSN
Trigger: GTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR CAA 90 bp AGATGGCAACCTATGCCAGCTAGTTGTAGACATCTAAGGGCAAACTaGACCAACATTTCTGGCAATGTAACCCACAATGTCAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: RWQPMPASCRHLRAN*TNISGNVTHNVKFW
Trigger: CCAAAACTTGACATTGTGGGTTACATTGCCAGAAATGTTGGTCAAGTTTGCCCTTAGATGTCTACAACTAGCTGGCATAGGTTGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGCTTTTCCCTCTCCTTaGTGTGAGATCTGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: VQILQNEYIILHGLCCREAFPSP*CEICKF
Trigger: AAACTTGCAGATCTCACATCAAGGAGAGGGAAAAGC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGACTTCCCAATTCGCTaGAACAGAACACAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: VQILQNEYIILHGLCCREDFPIR*NRTQVE
Trigger: TTCTACCTGTGTTCTGTTCCAGCGAATTGGGAAGTC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGACTTCCCAATTCGCTaGAACAGAACACAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: RFRDESNLTSVALIYWSSDFPIR*NRTQVE
Trigger: TTCTACCTGTGTTCTGTTCCAGCGAATTGGGAAGTC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGGTAGAATCAACATATaGTCTTTTGCGAGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: VQILQNEYIILHGLCCREGRINI*SFASSP
Trigger: AGGGCTACTCGCAAAAGACCATATGTTGATTCTACC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACTTGACCAACATTTCTaGCAATGTAACCCACAATGT +
Preference number: 2 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLDQHF*QCNPQC
Trigger: ACATTGTGGGTTACATTGCCAGAAATGTTGGTCAAG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGATTACTTGTTAAGATaGCAACCTATGCCAGCTAGT +
Preference number: 2 (lower is better)
Translates to: RFRDESNLTSVALIYWSSDYLLR*QPMPAS
Trigger: ACTAGCTGGCATAGGTTGCCATCTTAACAAGTAATC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGTATTGAGCTGTAGGTaGAGATTCTGCAAAATGAAT +
Preference number: 2 (lower is better)
Translates to: RFRDESNLTSVALIYWSSVLSCR*RFCKMN
Trigger: ATTCATTTTGCAGAATCTGCACCTACAGCTCAATAC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR CAA 90 bp AAACTTGACCAACATTTCTGGCAATGTAACCCACAATGTCAAGTTTaGGCTCAGATTTCTTGTTTGCAAATTCACAGCAGTATATTTTGC +
Preference number: 2 (lower is better)
Translates to: KLDQHFWQCNPQCQV*AQISCLQIHSSIFC
Trigger: GCAAAATATACTGCTGTGAATTTGCAAACAAGAAATCTGAGCCAAAACTTGACATTGTGGGTTACATTGCCAGAAATGTTGGTCAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR CCA 72 bp CAGTATGAGCGTCATGATGGCGGTGGTGGTGAGAAGTaGGGAAGGCAACATTTTATTCCCACTCCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: QYERHDGGGGEK*GRQHFIPTPLS
Trigger: AGAGAGGGGAGTGGGAATAAAATGTTGCCTTCCCCACTTCTCACCACCACCGCCATCATGACGCTCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATCAGCACCACCCGTATaGAGCTGTAGGTGCAGATTC +
Preference number: 3 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPSAPPV*SCRCRF
Trigger: GAATCTGCACCTACAGCTCAATACGGGTGGTGCTGA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGAAAACCACTTTCTTTaGATACTGCCCTCTGCAAAA +
Preference number: 3 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPENHFL*ILPSAK
Trigger: TTTTGCAGAGGGCAGTATCAAAAGAAAGTGGTTTTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATCAGCACCACCCGTATaGAGCTGTAGGTGCAGATTC +
Preference number: 3 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSAPPV*SCRCRF
Trigger: GAATCTGCACCTACAGCTCAATACGGGTGGTGCTGA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGGTAGACAATCTAGCTaGGTGAGACTTCCCAATTCG +
Preference number: 3 (lower is better)
Translates to: RFRDESNLTSVALIYWSSGRQSS*VRLPNS
Trigger: CGAATTGGGAAGTCTCACCAAGCTAGATTGTCTACC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGGTAGACAATCTAGCTaGGTGAGACTTCCCAATTCG +
Preference number: 3 (lower is better)
Translates to: VQILQNEYIILHGLCCREGRQSS*VRLPNS
Trigger: CGAATTGGGAAGTCTCACCAAGCTAGATTGTCTACC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR GCA 72 bp ATTCTGCAAAATGAATATATAATACTGCATGGCCTCTaGTGTAGGGAAAACGTGTGTGTTCTGGGTTCCCAC +
Preference number: 3 (lower is better)
Translates to: ILQNEYIILHGL*CRENVCVLGSH
Trigger: GTGGGAACCCAGAACACACACGTTTTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATCAACATATGGTCTTTaGCGAGTAGCCCTAATGATG +
Preference number: 3 (lower is better)
Translates to: VQILQNEYIILHGLCCRESTYGL*RVALMM
Trigger: CATCATTAGGGCTACTCGCAAAAGACCATATGTTGA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATCAACATATGGTCTTTaGCGAGTAGCCCTAATGATG +
Preference number: 3 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSTYGL*RVALMM
Trigger: CATCATTAGGGCTACTCGCAAAAGACCATATGTTGA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGAAAAATCCCCAAAGTaGGCACATTCAGGAAGTAAA +
Preference number: 3 (lower is better)
Translates to: VQILQNEYIILHGLCCREEKSPK*AHSGSK
Trigger: TTTACTTCCTGAATGTGCCAACTTTGGGGATTTTTC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGAAAAATCCCCAAAGTaGGCACATTCAGGAAGTAAA +
Preference number: 3 (lower is better)
Translates to: RFRDESNLTSVALIYWSSEKSPK*AHSGSK
Trigger: TTTACTTCCTGAATGTGCCAACTTTGGGGATTTTTC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
3UTR CCA 72 bp CAGATCAACCATCTCTGTTGTTTCCTTTCATCCCCTTaGCAATCATCAAGTATATATCGGAATTCTTATGAA +
Preference number: 3 (lower is better)
Translates to: QINHLCCFLSSP*QSSSIYRNSYE
Trigger: TTCATAAGAATTCCGATATATACTTGATGATTGCCAAGGGGATGAAAGGAAACAACAGAGATGGTTGATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGACATCCCTGCCGCCTaGCCGGGTCTGCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPDIPAA*PGLRPP
Trigger: GGGAGGACGCAGACCCGGGCAGGCGGCAGGGATGTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGCAGCTGAGGCGAGCTaGCTCCTCCAGCCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPAAEAS*LLQPQA
Trigger: CGCTTGGGGCTGGAGGAGGCAGCTCGCCTCAGCTGC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATGTGCACAGCGCAGCTaGGGCGAGCTGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPCAQRS*GELPPP
Trigger: TGGAGGAGGCAGCTCGCCTCAGCTGCGCTGTGCACA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGATGTGCACCAACTGTaGGGACCCAGGACGGGACTG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPDVHQL*GPRTGL
Trigger: CAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACATC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATTCGCTGCCCTCTACTaGGGTGACGCGGATGGTGGT +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPFAALY*GDADGG
Trigger: ACCACCATCCGCGTCACCCCAGTAGAGGGCAGCGAA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGGTCTGTCAGAGACCTaGGGGCGTCTCTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPGLSET*GRLCAE
Trigger: TTCAGCACAGAGACGCCCTCAGGTCTCTGACAGACC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAGCGCCCGGCGCCGCTaGTGTCACATTCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSARRR*CHIPRG
Trigger: GCCGCGGGGAATGTGACATCAGCGGCGCCGGGCGCT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACAGGACGGGACTGAATaGACACTCTTGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPQDGTE*TLLALQ
Trigger: CTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACCCCCGGGCGAGGTGTaGACAGCGCAGCTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSPPGEV*TAQLRR
Trigger: TCGCCTCAGCTGCGCTGTGCACACCTCGCCCGGGGG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACTTCGCCGACATCCCTaGCGCCTGCCCGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRELRRHP*RLPGSA
Trigger: CGCAGACCCGGGCAGGCGGCAGGGATGTCGGCGAAG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACAGTGCAGGAGACCGTaGTGCCTTCAGTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPQCRRP*CLQCSW
Trigger: CCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAGCCAGCGCGCTGCATaGAGCGCCCCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSQRAA*SAPAFS
Trigger: GGAGAAGGCGGGGGCGCTGCATGCAGCGCGCTGGCT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACTGGAGCCAGCGCGCTaGATGCAGCGCCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLEPAR*MQRPRL
Trigger: AAGGCGGGGGCGCTGCATGCAGCGCGCTGGCTCCAG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACCCTCACTATCCCACTaGGCTCATGGTCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPPSLSH*AHGLSR
Trigger: CCTTGACAGACCATGAGCCCAGTGGGATAGTGAGGG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATGGACGGGATCTGTATaGTGGGCCTGTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPWTGSV*WACCSL
Trigger: CAGAGAACAACAGGCCCATCATACAGATCCCGTCCA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGACATGGCTATGACTTaGATGATTCGGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPDMAMT*MIRGWL
Trigger: CAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAAGTTTGGCGAAGGCTaGCCTTTTCAGGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPKFGEG*PFQGLS
Trigger: GGAAAGCCCCTGAAAAGGGCAGCCTTCGCCAAACTT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAGGGTCTTCTACAGATaGGGTATTGGCTCGCGGCAA +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPRVFYR*GIGSRQ
Trigger: TTGCCGCGAGCCAATACCCCATCTGTAGAAGACCCT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGAGGCTAACCACCGATaGTGCCAATATAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPEANHR*CQYRQL
Trigger: GAGTTGCCTATATTGGCATCATCGGTGGTTAGCCTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGCAAGGGTTGCATGTTaGGAAGGGAAGGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPARVAC*EGKDFL
Trigger: CAGAAAGTCCTTCCCTTCTCAACATGCAACCCTTGC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAGTCGGTTGGGATCTTaGTTGAGGTCTGTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPSRLGS*LRSVRD
Trigger: GTCTCTGACAGACCTCAATCAAGATCCCAACCGACT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGTGCTTATGTTTTCCTaGGTCTCCTCAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPVLMFS*VSSGMC
Trigger: GCACATCCCTGAGGAGACTCAGGAAAACATAAGCAC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACGAAACATACACAGCTaGAAAGGCAGCAAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPRNIHS*KGSKGC
Trigger: GCAACCCTTGCTGCCTTTGCAGCTGTGTATGTTTCG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGAGCTAGCATCTCTGTaGTTTCGGTTGAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPELASL*FRLRMP
Trigger: AGGCATCCTCAACCGAAACCACAGAGATGCTAGCTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACAGCTTTTAACCACTTaGCCCGAGCAGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPQLLTT*PEQSCF
Trigger: AAAGCAGCTCTGCTCGGGCCAAGTGGTTAAAAGCTG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAGGATGCCTTCTGTATaGGCAATTCCATCACTGCTG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPRMPSV*AIPSLL
Trigger: CAGCAGTGATGGAATTGCTCATACAGAAGGCATCCT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAGACTCACAGCTTTCTaGGTCCCTGTTGAGATCGTT +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPRLTAF*VPVEIV
Trigger: AACGATCTCAACAGGGACTCAGAAAGCTGTGAGTCT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACTGCACCTGAAATGCTaGAGCAGGGGTTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPLHLKC*SRGFCL
Trigger: CAAACAAAAACCCCTGCTGCAGCATTTCAGGTGCAG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAATGGAATTGCCTCCTaGGTTGGTTCAATGTACGGC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPNGIAS*VGSMYG
Trigger: GCCGTACATTGAACCAACCCAGGAGGCAATTCCATT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATTGACCTCATTTCTATaGATCTGGGTGGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPLTSFL*IWVVTA
Trigger: GGCAGTCACCACCCAGATCCATAGAAATGAGGTCAA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATATGGATCTGGGTGGTaGCTGCCCAGGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREYGSGW*LPRLRL
Trigger: GAGCCTGAGCCTGGGCAGTCACCACCCAGATCCATA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGACCCAGGACGGGACTaGATGGACACTCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREDPGRD*MDTLGP
Trigger: AGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGTAATTCCGTGGTGGTaGTGCTCATTGCTATCAATG +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPVIPWW*CSLLSM
Trigger: CATTGATAGCAATGAGCATCACCACCACGGAATTAC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAGCGGATGGAGCCAGTaGAGGAGACCGTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSGWSQ*RRPCCL
Trigger: AAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATGGCCCGAGCAGAGCTaGTTTTGGGGGAGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREWPEQS*FWGRCL
Trigger: TAAGCACCTCCCCCAAAAGCAGCTCTGCTCGGGCCA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATGTTTTCGGGGCTGTTaGTTCTTTCAGGGATTAGAA +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPCFRGC*FFQGLE
Trigger: TTCTAATCCCTGAAAGAAGCAACAGCCCCGAAAACA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATTCTTATTCTTCCACTaGGTGAGGAGCTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPFLFFH*VRSCFD
Trigger: ATCAAAGCAGCTCCTCACCCAGTGGAAGAATAAGAA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGGGCCTGTTGTTCTCTaGGTGAGCCTCAACCCTCAC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSGPVVL*VSLNPH
Trigger: GTGAGGGTTGAGGCTCACCCAGAGAACAACAGGCCC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATGCTCCCCGTTTTTCTaGCGAGAGACGACGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSCSPFF*RETTSS
Trigger: GCTGGACGTCGTCTCTCGCCAGAAAAACGGGGAGCA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAATGGACAGCGTCTCTaGGCCAATTTCGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSNGQRL*ANFAAL
Trigger: GAGGGCAGCGAAATTGGCTCAGAGACGCTGTCCATT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATACCATAATCGTAATTaGAGGTCCAGCAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPYHNRN*RSSKSQ
Trigger: TTGGCTTTTGCTGGACCTGCAATTACGATTATGGTA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACACTGGGTGAGGAGCTaGTTTGATCGAGCGGAATCC +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREHWVRS*FDRAES
Trigger: GGATTCCGCTCGATCAAAGCAGCTCCTCACCCAGTG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATTGGCCCTCCAGGCATaGTGTTGTTACATCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLALQA*CCYIRG
Trigger: TCCCCGGATGTAACAACAGCATGCCTGGAGGGCCAA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGTCTCCTCAGGGATGTaGACCAACTGTGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSVSSGM*TNCEDP
Trigger: TGGGTCCTCACAGTTGGTGCACATCCCTGAGGAGAC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACAGTGTTCTTGGGGCTaGTTTGGAGGACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREQCSWG*FGGHPA
Trigger: AGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAACTTCCAGGAGCCACTaGCTTCACCTTCAGTGGACG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRETSRSH*LHLQWT
Trigger: CGTCCACTGAAGGTGAAGGCAGTGGCTCCTGGAAGT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATTGCCAGGACCATGGTaGTCTCCATTCACCCCTACC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLPGPW*SPFTPT
Trigger: GGTAGGGGTGAATGGAGACCACCATGGTCCTGGCAA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACCTTTCTCCGCAGGGTaGAGTCGCGGGAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREPFSAG*SRGKKK
Trigger: TTTCTTCTTCCCGCGACTCCACCCTGCGGAGAAAGG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACTTGACCAACATTTCTaGCAATGTAACCCACAATGT +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPLDQHF*QCNPQC
Trigger: ACATTGTGGGTTACATTGCCAGAAATGTTGGTCAAG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACTTCCTCCCCTAGTCTaGCTCCTGCTCCCCGTTTTT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLPPLV*LLLPVF
Trigger: AAAAACGGGGAGCAGGAGCCAGACTAGGGGAGGAAG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
3UTR CAA 72 bp GTTACAGAGTTCTGGGCTGATGGTAGACAATCTAGCTaGGTGAGACTTCCCAATTCGCTGGAACAGAACACA +
Preference number: 4 (lower is better)
Translates to: VTEFWADGRQSS*VRLPNSLEQNT
Trigger: TGTGTTCTGTTCCAGCGAATTGGGAAGTCTCACCAAGCTAGATTGTCTACCATCAGCCCAGAACTCTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
CDS-3UTR TCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACATAATCCAAATACATaGACACCAACGAATCTGACA +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPHNPNT*TPTNLT
Trigger: TGTCAGATTCGTTGGTGTTCATGTATTTGGATTATG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGGTGAGGAGCTGCTTTaGTCGAGCGGAATCCATAGA +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREGEELL*SSGIHR
Trigger: TCTATGGATTCCGCTCGATCAAAGCAGCTCCTCACC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACTGTTGTTCTCTGGGTaGGCCTCAACCCTCACTATC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLLFSG*ASTLTI
Trigger: GATAGTGAGGGTTGAGGCTCACCCAGAGAACAACAG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATCCCACTCCCCTCTCTaGGAAGGAAATTGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSHSPL*EGNCQK
Trigger: CTTCTGGCAATTTCCTTCTCAGAGAGGGGAGTGGGA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATGGAGGACACCCTGCTaGTTGGACATGGCTATGACT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSWRTPC*LDMAMT
Trigger: AGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACTTTGGAGGACACCCTaGTGCTTGGACATGGCTATG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRELWRTP*CLDMAM
Trigger: CATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACAGAGTTTTCAATTCTaGTGGTTTCAGCTAAATTCC +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPQSFQF*WFQLNS
Trigger: GGAATTTAGCTGAAACCAGCAGAATTGAAAACTCTG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGATCACTTTGCCCTTTaGCCTCTCCTTCGCCGACAT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSDHFAL*PLLRRH
Trigger: ATGTCGGCGAAGGAGAGGCCAAAGGGCAAAGTGATC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACCCCATGGGGCTCCGTaGAGTAATGATTTCCACATC +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREPHGAP*SNDFHI
Trigger: GATGTGGAAATCATTACTCCACGGAGCCCCATGGGG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACTACAGATGGGGTATTaGCTCGCGGCAAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRELQMGY*LAARYC
Trigger: GCAATACCTTGCCGCGAGCCAATACCCCATCTGTAG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACTGAATGGACACTCTTaGCCCTCCAGGCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRELNGHS*PSRHAV
Trigger: AACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATGCCTTCAGTGTTCTTaGGGCTGCTTTGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSCLQCS*GCFGGH
Trigger: GTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAAGGTTTTATAGCGGATaGAGCCAGTGCAGGAGACCG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRERFYSG*SQCRRP
Trigger: CGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATTGCCAGAAGGGATATaGTTGAGTCCATGTTTTATT +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPLPEGI*LSPCFI
Trigger: AATAAAACATGGACTCAACCATATCCCTTCTGGCAA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAGGGCGTCTCTGTGCTaGAACATACTCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSRASLC*NILSSL
Trigger: CAGTGATGAGAGTATGTTTCAGCACAGAGACGCCCT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACTCTGTGGTTTCGGTTaGGGATGCCTTCTGTATGAG +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLCGFG*GCLLYE
Trigger: CTCATACAGAAGGCATCCTCAACCGAAACCACAGAG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATATTCTTCCACTGGGTaGGGAGCTGCTTTGATCGAG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREYSSTG*GAALIE
Trigger: CTCGATCAAAGCAGCTCCTCACCCAGTGGAAGAATA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATGGATTTTGAGGTACTaGTTGCCAGGACCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREWILRY*LPGPWW
Trigger: CCACCATGGTCCTGGCAATCAGTACCTCAAAATCCA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGACAATCTAGCTTGGTaGGACTTCCCAATTCGCTGG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREDNLAW*DFPIRW
Trigger: CCAGCGAATTGGGAAGTCTCACCAAGCTAGATTGTC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATCATTTCTATGGATCTaGGTGGTGACTGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSFLWI*VVTAQA
Trigger: AGCCTGGGCAGTCACCACCCAGATCCATAGAAATGA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATGCATGATTCGGGGCTaGCTGTTGCTTCTGTTACAG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRECMIRG*LLLLLQ
Trigger: CTGTAACAGAAGCAACAGCCAGCCCCGAATCATGCA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACCTTATAAGCCCGTGTaGGGGAGGTTCCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREPYKPV*GRFLCR
Trigger: TCTACAAAGGAACCTCCCCCACACGGGCTTATAAGG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGTGGCTCTAATTTACTaGTCATCAGGATATAGAAAA +
Preference number: 4 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPVALIY*SSGYRK
Trigger: TTTTCTATATCCTGATGACCAGTAAATTAGAGCCAC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
3UTR CAA 72 bp CCTATGCCAGCTAGTTGTAGACATCTAAGGGCAAACTaGACCAACATTTCTGGCAATGTAACCCACAATGTC +
Preference number: 4 (lower is better)
Translates to: PMPASCRHLRAN*TNISGNVTHNV
Trigger: GACATTGTGGGTTACATTGCCAGAAATGTTGGTCAAGTTTGCCCTTAGATGTCTACAACTAGCTGGCATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.8
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATGCTCGCATTTCTTCTaGCAGGGTCTTCTACAGATG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRECSHFF*QGLLQM
Trigger: CATCTGTAGAAGACCCTGTCAGAAGAAATGCGAGCA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAATATCATACTGCACCTaGAATGCTGCAGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREISYCT*NAAAGV
Trigger: AACCCCTGCTGCAGCATTTCAGGTGCAGTATGATAT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAAAGGCAGCAAGGGTTaGATGTTGAGAAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSKGSKG*MLRREG
Trigger: TCCTTCCCTTCTCAACATGCAACCCTTGCTGCCTTT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAAATTGCCTCCTGGGTTaGTTCAATGTACGGCATGCT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRENCLLG*FNVRHA
Trigger: AGCATGCCGTACATTGAACCAACCCAGGAGGCAATT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAACATACTCTCATCACTaGGCAGGAAATTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRETYSHH*AGNSPQ
Trigger: CTGTGGGGAATTTCCTGCCCAGTGATGAGAGTATGT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGAGCAGAGCTGCTTTTaGGGGAGGTGCTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSEQSCF*GRCLCF
Trigger: AAAACATAAGCACCTCCCCCAAAAGCAGCTCTGCTC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGAATCCATAGAGGCATaGATGCTCGCATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSESIEA*MLAFLL
Trigger: CAGAAGAAATGCGAGCATTCATGCCTCTATGGATTC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATTTAGGCTCAAGGCTTaGTTCAGGATAGGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREFRLKA*FRIGSN
Trigger: GTTGCTACCTATCCTGAATCAAGCCTTGAGCCTAAA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAATACTGCACCTGAAATaGTGCAGCAGGGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSILHLK*CSRGFC
Trigger: ACAAAAACCCCTGCTGCAGCATTTCAGGTGCAGTAT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATGTGAGGTCAGATCCTaGGCAAATATCTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRECEVRS*ANIFHN
Trigger: ATTGTGGAAGATATTTGCTCAGGATCTGACCTCACA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATTTCAGGGATTAGAATaGTATTGCCCTTTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREFQGLE*YCPFSA
Trigger: TGCGGAGAAAGGGCAATATCATTCTAATCCCTGAAA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR TCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACAGAAGGGATATGGTTaGGTCCATGTTTTATTGCCA +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREQKGYG*VHVLLP
Trigger: TGGCAATAAAACATGGACTCAACCATATCCCTTCTG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACAGCTAAATCCAGAGTaGACAGGTTTGAAGACATCT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREQLNPE*TGLKTS
Trigger: AGATGTCTTCAAACCTGTGCACTCTGGATTTAGCTG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAAGTCAGAAAGTAAGGTaGTTGATATCCTGTGGACAG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRESQKVR*LISCGQ
Trigger: CTGTCCACAGGATATCAAGCACCTTACTTTCTGACT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACATTGCTATCAATGTTaGTTCTCTTGCGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREHCYQC*FSCDLQ
Trigger: CTGGAGATCGCAAGAGAAGCAACATTGATAGCAATG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGGTGGTGATGCTCATTaGTATCAATGTTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSGGDAH*YQCCFS
Trigger: AGAGAAGCAACATTGATAGCAATGAGCATCACCACC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACCCCATTTCTTCTTTTaGAGAGGCAACAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREPHFFF*RGNSRE
Trigger: TTCTCTACTGTTGCCTCTCCAAAAGAAGAAATGGGG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATCAGGCTCTATAACTTaGAAGGACAACTTTCGACTT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSGSIT*KDNFRL
Trigger: AAGTCGAAAGTTGTCCTTGCAAGTTATAGAGCCTGA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGCCCTAATGATGGAATaGACATCACTCAATCCTTAT +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSALMME*TSLNPY
Trigger: ATAAGGATTGAGTGATGTCCATTCCATCATTAGGGC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAAGGTATAGTTTGGTTTaGACACAGTCAGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRERYSLV*TQSESK
Trigger: CTTACTTTCTGACTGTGTGCAAACCAAACTATACCT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGTATTGAGCTGTAGGTaGAGATTCTGCAAAATGAAT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREVLSCR*RFCKMN
Trigger: ATTCATTTTGCAGAATCTGCACCTACAGCTCAATAC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATCTTTAACAAGGAATTaGACACCACTATTTCACAGC +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRESLTRN*TPLFHS
Trigger: GCTGTGAAATAGTGGTGTGCAATTCCTTGTTAAAGA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR GCA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGAGTCCATGTTTTATTaGCAGAGTTTTCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: RFRDESNLTSVALIYWSSESMFY*QSFQFC
Trigger: GCAGAATTGAAAACTCTGGCAATAAAACATGGACTC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATCAGATTCTTCCTCTTaGTGTCCAATTAACAAAAAC +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCRESDSSS*CPINKN
Trigger: GTTTTTGTTAATTGGACACCAAGAGGAAGAATCTGA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CCA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATTCCTTTCATCCCCTTaGCAATCATCAAGTATATAT +
Preference number: 4 (lower is better)
Translates to: VQILQNEYIILHGLCCREFLSSP*QSSSIY
Trigger: ATATATACTTGATGATTGCCAAGGGGATGAAAGGAA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS GCA 90 bp GCGTCCTCCCCCGGGCGAGGTGTGCACAGCGCAGCTGAGGCGAGCTaGCTCCTCCAGCCCCAAGCGCCCGGCGCCGCTGATGTCACATTC +
Preference number: 5 (lower is better)
Translates to: ASSPGRGVHSAAEAS*LLQPQAPGAADVTF
Trigger: GAATGTGACATCAGCGGCGCCGGGCGCTTGGGGCTGGAGGAGGCAGCTCGCCTCAGCTGCGCTGTGCACACCTCGCCCGGGGGAGGACGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS GCA 90 bp ATCACTTTGCCCTTTGGCCTCTCCTTCGCCGACATCCCTGCCGCCTaGCCGGGTCTGCGTCCTCCCCCGGGCGAGGTGTGCACAGCGCAG +
Preference number: 5 (lower is better)
Translates to: ITLPFGLSFADIPAA*PGLRPPPGEVCTAQ
Trigger: CTGCGCTGTGCACACCTCGCCCGGGGGAGGACGCAGACCCGGGCAGGCGGCAGGGATGTCGGCGAAGGAGAGGCCAAAGGGCAAAGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp GTCCTTGATCACTTTGCCCTTTGGCCTCTCCTTCGCCGACATCCCTaGCGCCTGCCCGGGTCTGCGTCCTCCCCCGGGCGAGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: VLDHFALWPLLRRHP*RLPGSASSPGRGVH
Trigger: GTGCACACCTCGCCCGGGGGAGGACGCAGACCCGGGCAGGCGGCAGGGATGTCGGCGAAGGAGAGGCCAAAGGGCAAAGTGATCAAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS CCA 90 bp AAAGCAGGGCAGGAGGGTGACGCTGTCCTTGATCACTTTGCCCTTTaGCCTCTCCTTCGCCGACATCCCTGCCGCCTGCCCGGGTCTGCG +
Preference number: 5 (lower is better)
Translates to: KAGQEGDAVLDHFAL*PLLRRHPCRLPGSA
Trigger: CGCAGACCCGGGCAGGCGGCAGGGATGTCGGCGAAGGAGAGGCCAAAGGGCAAAGTGATCAAGGACAGCGTCACCCTCCTGCCCTGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS TCA 90 bp TCTCCGCAGGGTGGAGTCGCGGGAAGAAGAAATGGACAGCGTCTCTaGGCCAATTTCGCTGCCCTCTACTGGGGTGACGCGGATGGTGGT +
Preference number: 5 (lower is better)
Translates to: SPQGGVAGRRNGQRL*ANFAALYWGDADGG
Trigger: ACCACCATCCGCGTCACCCCAGTAGAGGGCAGCGAAATTGGCTCAGAGACGCTGTCCATTTCTTCTTCCCGCGACTCCACCCTGCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 90 bp CCTCAGGGATGTGCACCAACTGTGAGGACCCAGGACGGGACTGAATaGACACTCTTGGCCCTCCAGGCATGCTGTTGTTACATCCGGGGA +
Preference number: 5 (lower is better)
Translates to: PQGCAPTVRTQDGTE*TLLALQACCCYIRG
Trigger: TCCCCGGATGTAACAACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACATCCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 90 bp GTCTCCTCAGGGATGTGCACCAACTGTGAGGACCCAGGACGGGACTaGATGGACACTCTTGGCCCTCCAGGCATGCTGTTGTTACATCCG +
Preference number: 5 (lower is better)
Translates to: VSSGMCTNCEDPGRD*MDTLGPPGMLLLHP
Trigger: CGGATGTAACAACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACATCCCTGAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp ACCGTGCTGCCTTCAGTGTTCTTGGGGCTGCTTTGGAGGACACCCTaGTGCTTGGACATGGCTATGACTTGCATGATTCGGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TVLPSVFLGLLWRTP*CLDMAMTCMIRGWL
Trigger: CAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 90 bp GGTGCTTATGTTTTCCTGAGTCTCCTCAGGGATGTGCACCAACTGTaGGGACCCAGGACGGGACTGAATGGACACTCTTGGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GAYVFLSLLRDVHQL*GPRTGLNGHSWPSR
Trigger: CCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACATCCCTGAGGAGACTCAGGAAAACATAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp GGGCTGCTTTGGAGGACACCCTGCTGCTTGGACATGGCTATGACTTaGATGATTCGGGGCTGGCTGTTGCTTCTGTTACAGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: GLLWRTPCCLDMAMT*MIRGWLLLLLQATV
Trigger: GACTGTGGCCTGTAACAGAAGCAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp GTGCTGCCTTCAGTGTTCTTGGGGCTGCTTTGGAGGACACCCTGCTaGTTGGACATGGCTATGACTTGCATGATTCGGGGCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VLPSVFLGLLWRTPC*LDMAMTCMIRGWLL
Trigger: CAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp CTGTCAAGGTTTTATAGCGGATGGAGCCAGTGCAGGAGACCGTGCTaGCTTCAGTGTTCTTGGGGCTGCTTTGGAGGACACCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LSRFYSGWSQCRRPC*LQCSWGCFGGHPAA
Trigger: AGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp GGTCTGTCAAGGTTTTATAGCGGATGGAGCCAGTGCAGGAGACCGTaGTGCCTTCAGTGTTCTTGGGGCTGCTTTGGAGGACACCCTGCT +
Preference number: 5 (lower is better)
Translates to: GLSRFYSGWSQCRRP*CLQCSWGCFGGHPA
Trigger: AGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCTTGACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 90 bp CCTTCAGTGGACGGGATCTGTATGATGGGCCTGTTGTTCTCTGGGTaGGCCTCAACCCTCACTATCCCACTGGGCTCATGGTCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: PSVDGICMMGLLFSG*ASTLTIPLGSWSVK
Trigger: CTTGACAGACCATGAGCCCAGTGGGATAGTGAGGGTTGAGGCTCACCCAGAGAACAACAGGCCCATCATACAGATCCCGTCCACTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 90 bp ACTTCCAGGAGCCACTGCCTTCACCTTCAGTGGACGGGATCTGTATaGTGGGCCTGTTGTTCTCTGGGTGAGCCTCAACCCTCACTATCC +
Preference number: 5 (lower is better)
Translates to: TSRSHCLHLQWTGSV*WACCSLGEPQPSLS
Trigger: GGATAGTGAGGGTTGAGGCTCACCCAGAGAACAACAGGCCCATCATACAGATCCCGTCCACTGAAGGTGAAGGCAGTGGCTCCTGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp CACTGGGCTCATGGTCTGTCAAGGTTTTATAGCGGATGGAGCCAGTaGAGGAGACCGTGCTGCCTTCAGTGTTCTTGGGGCTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: HWAHGLSRFYSGWSQ*RRPCCLQCSWGCFG
Trigger: TCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCTTGACAGACCATGAGCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 90 bp CCAGTGCAGGAGACCGTGCTGCCTTCAGTGTTCTTGGGGCTGCTTTaGAGGACACCCTGCTGCTTGGACATGGCTATGACTTGCATGATT +
Preference number: 5 (lower is better)
Translates to: PVQETVLPSVFLGLL*RTPCCLDMAMTCMI
Trigger: AATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 90 bp TCACTATCCCACTGGGCTCATGGTCTGTCAAGGTTTTATAGCGGATaGAGCCAGTGCAGGAGACCGTGCTGCCTTCAGTGTTCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SLSHWAHGLSRFYSG*SQCRRPCCLQCSWG
Trigger: GCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCTTGACAGACCATGAGCCCAGTGGGATAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 90 bp TTCACCTTCAGTGGACGGGATCTGTATGATGGGCCTGTTGTTCTCTaGGTGAGCCTCAACCCTCACTATCCCACTGGGCTCATGGTCTGT +
Preference number: 5 (lower is better)
Translates to: FTFSGRDLYDGPVVL*VSLNPHYPTGLMVC
Trigger: ACAGACCATGAGCCCAGTGGGATAGTGAGGGTTGAGGCTCACCCAGAGAACAACAGGCCCATCATACAGATCCCGTCCACTGAAGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGCAGCTTTTAACCACTaGGCCCGAGCAGAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPAAFNH*ARAELL
Trigger: AAGCAGCTCTGCTCGGGCCAAGTGGTTAAAAGCTGC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS TCA 90 bp CTGCCCTCTACTGGGGTGACGCGGATGGTGGTAATTCCGTGGTGGTaGTGCTCATTGCTATCAATGTTGCTTCTCTTGCGATCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: LPSTGVTRMVVIPWW*CSLLSMLLLLRSPE
Trigger: TTCTGGAGATCGCAAGAGAAGCAACATTGATAGCAATGAGCATCACCACCACGGAATTACCACCATCCGCGTCACCCCAGTAGAGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGAATTGCCTCCTGGGTaGGTTCAATGTACGGCATGC +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPELPPG*VQCTAC
Trigger: GCATGCCGTACATTGAACCAACCCAGGAGGCAATTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATCTACAGATGGGGTATaGGCTCGCGGCAAGGTATTG +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPSTDGV*ARGKVL
Trigger: CAATACCTTGCCGCGAGCCAATACCCCATCTGTAGA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS TCA 90 bp CACTGGGTGAGGAGCTGCTTTGATCGAGCGGAATCCATAGAGGCATaGATGCTCGCATTTCTTCTGACAGGGTCTTCTACAGATGGGGTA +
Preference number: 5 (lower is better)
Translates to: HWVRSCFDRAESIEA*MLAFLLTGSSTDGV
Trigger: TACCCCATCTGTAGAAGACCCTGTCAGAAGAAATGCGAGCATTCATGCCTCTATGGATTCCGCTCGATCAAAGCAGCTCCTCACCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp GATGGCTCTGAGCTTGACCTCATTTCTATGGATCTGGGTGGTGACTaGCCAGGCTCAGGCTCTATAACTTGCAAGGACAACTTTCGACTT +
Preference number: 5 (lower is better)
Translates to: DGSELDLISMDLGGD*PGSGSITCKDNFRL
Trigger: AAGTCGAAAGTTGTCCTTGCAAGTTATAGAGCCTGAGCCTGGGCAGTCACCACCCAGATCCATAGAAATGAGGTCAAGCTCAGAGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATCGATGGCTCTGAGCTaGACCTCATTTCTATGGATC +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPSMALS*TSFLWI
Trigger: GATCCATAGAAATGAGGTCAAGCTCAGAGCCATCGA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGGTAGACAATCTAGCTaGGTGAGACTTCCCAATTCG +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPGRQSS*VRLPNS
Trigger: CGAATTGGGAAGTCTCACCAAGCTAGATTGTCTACC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS CCA 90 bp AGAGGCATGAATGCTCGCATTTCTTCTGACAGGGTCTTCTACAGATaGGGTATTGGCTCGCGGCAAGGTATTGCTGAAGGTAACCATGTT +
Preference number: 5 (lower is better)
Translates to: RGMNARISSDRVFYR*GIGSRQGIAEGNHV
Trigger: AACATGGTTACCTTCAGCAATACCTTGCCGCGAGCCAATACCCCATCTGTAGAAGACCCTGTCAGAAGAAATGCGAGCATTCATGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAAGGAAGGAATTGAAGTaGCAGCCTCCAGCATTAATG +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPRKELK*QPPALM
Trigger: CATTAATGCTGGAGGCTGCAACTTCAATTCCTTCCT...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGACTTTCTGCCACTGTaGATAACTGTGAGGTCAGAT +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPDFLPL*ITVRSD
Trigger: ATCTGACCTCACAGTTATCAACAGTGGCAGAAAGTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACCTCCAGGCATGCTGTaGTTACATCCGGGGACAGCG +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSPPGML*LHPGTA
Trigger: CGCTGTCCCCGGATGTAACAACAGCATGCCTGGAGG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS GCA 90 bp TCTATGGATCTGGGTGGTGACTGCCCAGGCTCAGGCTCTATAACTTaGAAGGACAACTTTCGACTTTCATTCTTATTCTTCCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: SMDLGGDCPGSGSIT*KDNFRLSFLFFHWV
Trigger: CACCCAGTGGAAGAATAAGAATGAAAGTCGAAAGTTGTCCTTGCAAGTTATAGAGCCTGAGCCTGGGCAGTCACCACCCAGATCCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 90 bp AGCATACAAGCCCGAAACATACACAGCTGCAAAGGCAGCAAGGGTTaGATGTTGAGAAGGGAAGGACTTTCTGCCACTGTTGATAACTGT +
Preference number: 5 (lower is better)
Translates to: SIQARNIHSCKGSKG*MLRREGLSATVDNC
Trigger: ACAGTTATCAACAGTGGCAGAAAGTCCTTCCCTTCTCAACATGCAACCCTTGCTGCCTTTGCAGCTGTGTATGTTTCGGGCTTGTATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATCAGAGAGGTATAGTTaGGTTTGCACACAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPSERYS*VCTQSE
Trigger: TTCTGACTGTGTGCAAACCAAACTATACCTCTCTGA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATCATTGCTATCAATGTaGCTTCTCTTGCGATCTCCA +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPSLLSM*LLLRSP
Trigger: TGGAGATCGCAAGAGAAGCAACATTGATAGCAATGA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCACATCTAAGGGCAAACTaGACCAACATTTCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPHLRAN*TNISGN
Trigger: ATTGCCAGAAATGTTGGTCAAGTTTGCCCTTAGATG...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAAGGGTGACGCTGTCCTaGATCACTTTGCCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCRERVTLS*ITLPFG
Trigger: GCCAAAGGGCAAAGTGATCAAGGACAGCGTCACCCT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACCTCCAGCATTAATGTaGGGCTCTAGTCCGACCCCA +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSPPALM*GSSPTP
Trigger: TGGGGTCGGACTAGAGCCCAACATTAATGCTGGAGG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAACTGAATGGACACTCTaGGCCCTCCAGGCATGCTGT +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCRETEWTL*ALQACC
Trigger: ACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGT...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAATTCGGGGCTGGCTGTaGCTTCTGTTACAGGCCACA +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSIRGWL*LLLQAT
Trigger: TGTGGCCTGTAACAGAAGCAACAGCCAGCCCCGAAT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGGACATGGCTATGACTaGCATGATTCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSGHGYD*HDSGLA
Trigger: AGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAGGACACCCTGCTGCTaGGACATGGCTATGACTTGC +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSRTPCC*DMAMTC
Trigger: GCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACTGCCTTCAGTGTTCTaGGGGCTGCTTTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCRELPSVF*GLLWRT
Trigger: TGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATTTGGCTCAGATTTCTaGTTTGCAAATTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPFGSDF*FANSQQ
Trigger: CTGCTGTGAATTTGCAAACAAGAAATCTGAGCCAAA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACTGTCCTTGATCACTTaGCCCTTTGGCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLSLIT*PFGLSF
Trigger: GAAGGAGAGGCCAAAGGGCAAAGTGATCAAGGACAG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACAAAGGCAGCAAGGGTaGCATGTTGAGAAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSQRQQG*HVEKGR
Trigger: CCTTCCCTTCTCAACATGCAACCCTTGCTGCCTTTG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGCTCGCGGCAAGGTATaGCTGAAGGTAACCATGTTC +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSARGKV*LKVTMF
Trigger: GAACATGGTTACCTTCAGCAATACCTTGCCGCGAGC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACGAGCAGAGCTGCTTTaGGGGGAGGTGCTTATGTTT +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSRAELL*GEVLMF
Trigger: AAACATAAGCACCTCCCCCAAAAGCAGCTCTGCTCG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGTTGAGCTCGTAAGTTaGGCGAAGGCTGCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCREVELVS*AKAALF
Trigger: GAAAAGGGCAGCCTTCGCCAAACTTACGAGCTCAAC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATCAGCACCACCCGTATaGAGCTGTAGGTGCAGATTC +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCRESAPPV*SCRCRF
Trigger: GAATCTGCACCTACAGCTCAATACGGGTGGTGCTGA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCAGAAGAAAGCAGAATTTaGAAGAAACGCACAAAAACC +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPEESRI*KKRTKT
Trigger: GGTTTTTGTGCGTTTCTTCAAAATTCTGCTTTCTTC...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp ACAGAGCCACTACAGAGAAGCTGCGGGGTGTCCTATTCTAACACAAAGCAGCCATTTCCTTTCATCCCCTaGGCAATCATCAAGTATATA +
Preference number: 5 (lower is better)
Translates to: TEPLQRSCGVSYSNTKQPFPFIP*AIIKYI
Trigger: TATATACTTGATGATTGCCAAGGGGATGAAAGGAAA...TGGCTGCTTTGTGTTAGAATAGGACACCCCGCAGCTTCTCTGTAGTGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS GCA 90 bp ATTGAAGTACATCGAAACATACACAGCTGCAAAGGCAGCAAGGGTTaGATGTTGAGAAGGGAAGGACTTTCTGCCACTGTTGATAACTGT +
Preference number: 5 (lower is better)
Translates to: IEVHRNIHSCKGSKG*MLRREGLSATVDNC
Trigger: ACAGTTATCAACAGTGGCAGAAAGTCCTTCCCTTCTCAACATGCAACCCTTGCTGCCTTTGCAGCTGTGTATGTTTCGATGTACTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370184.1
ENST00000370185.9
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACCAGAGTGCACAGGTTaGAAGACATCTGTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCREPECTG*KTSVSS
Trigger: CGAACTCACAGATGTCTTCAAACCTGTGCACTCTGG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAGGGATTAGAATGATATaGCCCTTTCTCCGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSGIRMI*PFLRRV
Trigger: CACCCTGCGGAGAAAGGGCAATATCATTCTAATCCC...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS TCA 90 bp AGAGAGCTAGCATCTCTGTGGTTTCGGTTGAGGATGCCTTCTGTATaGGCAATTCCATCACTGCTGCTACCATTTTTAGCAGATAAAAGT +
Preference number: 5 (lower is better)
Translates to: RELASLWFRLRMPSV*AIPSLLLPFLADKS
Trigger: ACTTTTATCTGCTAAAAATGGTAGCAGCAGTGATGGAATTGCTCATACAGAAGGCATCCTCAACCGAAACCACAGAGATGCTAGCTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 90 bp AGACTTCCCAATTCGCTGGAACAGAACACAGGTAGAATCAACATATaGTCTTTTGCGAGTAGCCCTAATGATGGAATGGACATCACTCAA +
Preference number: 5 (lower is better)
Translates to: RLPNSLEQNTGRINI*SFASSPNDGMDITQ
Trigger: TTGAGTGATGTCCATTCCATCATTAGGGCTACTCGCAAAAGACCATATGTTGATTCTACCTGTGTTCTGTTCCAGCGAATTGGGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACAGAAAGTAAGGTGCTaGATATCCTGTGGACAGCTG +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSQKVRC*ISCGQL
Trigger: CAGCTGTCCACAGGATATCAAGCACCTTACTTTCTG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCAAAGTCGGTTGGGATCTaGATTGAGGTCTGTCAGAGA +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSKSVGI*IEVCQR
Trigger: TCTCTGACAGACCTCAATCAAGATCCCAACCGACTT...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGTGTTTTCGGGGCTGTaGCTTCTTTCAGGGATTAGA +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCREVFSGL*LLSGIR
Trigger: TCTAATCCCTGAAAGAAGCAACAGCCCCGAAAACAC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCACTCAGGCTCTATAACTaGCAAGGACAACTTTCGACT +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSLRLYN*QGQLST
Trigger: AGTCGAAAGTTGTCCTTGCAAGTTATAGAGCCTGAG...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAATCAATGTTGCTTCTCTaGCGATCTCCAGAACCAAAG +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCRESMLLL*RSPEPK
Trigger: CTTTGGTTCTGGAGATCGCAAGAGAAGCAACATTGA...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACCAGAAGGGATATGGTaGAGTCCATGTTTTATTGCC +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCREPEGIW*SPCFIA
Trigger: GGCAATAAAACATGGACTCAACCATATCCCTTCTGG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATCTCTGAGAAGGAAATaGCCAGAAGGGATATGGTTG +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSLRRK*PEGIWL
Trigger: CAACCATATCCCTTCTGGCAATTTCCTTCTCAGAGA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS GCA 90 bp AGGAATTTTCTTTGCAAGATACATTCAGAGAGGTATAGTTTGGTTTaGACACAGTCAGAAAGTAAGGTGCTTGATATCCTGTGGACAGCT +
Preference number: 5 (lower is better)
Translates to: RNFLCKIHSERYSLV*TQSESKVLDILWTA
Trigger: AGCTGTCCACAGGATATCAAGCACCTTACTTTCTGACTGTGTGCAAACCAAACTATACCTCTCTGAATGTATCTTGCAAAGAAAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAAGAAAACCACTTTCTTTaGATACTGCCCTCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCREENHFL*ILPSAK
Trigger: TTTTGCAGAGGGCAGTATCAAAAGAAAGTGGTTTTC...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp GTGCAGATTCTGCAAAATGAATATATAATACTGCATGGCCTCTGCTGTAGGGAACCACAATGTCAAGTTTaGGCTCAGATTTCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: VQILQNEYIILHGLCCREPQCQV*AQISCL
Trigger: CAAACAAGAAATCTGAGCCAAAACTTGACATTGTGG...TTCCCTACAGCAGAGGCCATGCAGTATTATATATTCATTTTGCAGAATCTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS-3UTR CAA 90 bp CGTTTTAGAGACGAGTCAAACTTAACCAGTGTGGCTCTAATTTACTGGTCATCATCACAGCAGTATATTTaGCTCAAGGAATGTCAATTG +
Preference number: 5 (lower is better)
Translates to: RFRDESNLTSVALIYWSSSQQYI*LKECQL
Trigger: CAATTGACATTCCTTGAGCAAAATATACTGCTGTGA...TGATGACCAGTAAATTAGAGCCACACTGGTTAAGTTTGACTCGTCTCTAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS TCA 72 bp TGCGTCCTCCCCCGGGCGAGGTGTGCACAGCGCAGCTaGGGCGAGCTGCCTCCTCCAGCCCCAAGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: CVLPRARCAQRS*GELPPPAPSAR
Trigger: CCGGGCGCTTGGGGCTGGAGGAGGCAGCTCGCCTCAGCTGCGCTGTGCACACCTCGCCCGGGGGAGGACGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp CCCGGGCGAGGTGTGCACAGCGCAGCTGAGGCGAGCTaGCTCCTCCAGCCCCAAGCGCCCGGCGCCGCTGAT +
Preference number: 6 (lower is better)
Translates to: PGRGVHSAAEAS*LLQPQAPGAAD
Trigger: ATCAGCGGCGCCGGGCGCTTGGGGCTGGAGGAGGCAGCTCGCCTCAGCTGCGCTGTGCACACCTCGCCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp GCCTGCCCGGGTCTGCGTCCTCCCCCGGGCGAGGTGTaGACAGCGCAGCTGAGGCGAGCTGCCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ACPGLRPPPGEV*TAQLRRAASSS
Trigger: GCTGGAGGAGGCAGCTCGCCTCAGCTGCGCTGTGCACACCTCGCCCGGGGGAGGACGCAGACCCGGGCAGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp TCTCCTTCGCCGACATCCCTGCCGCCTGCCCGGGTCTaGGTCCTCCCCCGGGCGAGGTGTGCACAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: SPSPTSLPPARV*VLPRARCAQRS
Trigger: GCTGCGCTGTGCACACCTCGCCCGGGGGAGGACGCAGACCCGGGCAGGCGGCAGGGATGTCGGCGAAGGAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp CCCTTTGGCCTCTCCTTCGCCGACATCCCTGCCGCCTaGCCGGGTCTGCGTCCTCCCCCGGGCGAGGTGTGC +
Preference number: 6 (lower is better)
Translates to: PFGLSFADIPAA*PGLRPPPGEVC
Trigger: GCACACCTCGCCCGGGGGAGGACGCAGACCCGGGCAGGCGGCAGGGATGTCGGCGAAGGAGAGGCCAAAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp CACTTTGCCCTTTGGCCTCTCCTTCGCCGACATCCCTaGCGCCTGCCCGGGTCTGCGTCCTCCCCCGGGCGA +
Preference number: 6 (lower is better)
Translates to: HFALWPLLRRHP*RLPGSASSPGR
Trigger: TCGCCCGGGGGAGGACGCAGACCCGGGCAGGCGGCAGGGATGTCGGCGAAGGAGAGGCCAAAGGGCAAAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp GACGGGACTGAATGGACACTCTTGGCCCTCCAGGCATaGTGTTGTTACATCCGGGGACAGCGCCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: DGTEWTLLALQA*CCYIRGQRQAG
Trigger: TCCAGCCTGGCGCTGTCCCCGGATGTAACAACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp AAGCAGGGCAGGAGGGTGACGCTGTCCTTGATCACTTaGCCCTTTGGCCTCTCCTTCGCCGACATCCCTGCC +
Preference number: 6 (lower is better)
Translates to: KQGRRVTLSLIT*PFGLSFADIPA
Trigger: GGCAGGGATGTCGGCGAAGGAGAGGCCAAAGGGCAAAGTGATCAAGGACAGCGTCACCCTCCTGCCCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp GAGCCAGTGCAGGAGACCGTGCTGCCTTCAGTGTTCTaGGGGCTGCTTTGGAGGACACCCTGCTGCTTGGAC +
Preference number: 6 (lower is better)
Translates to: EPVQETVLPSVF*GLLWRTPCCLD
Trigger: GTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp TGTGCACCAACTGTGAGGACCCAGGACGGGACTGAATGGACACTCTaGGCCCTCCAGGCATGCTGTTGTTACATCCGGGGACAGCGCCAG +
Preference number: 6 (lower is better)
Translates to: CAPTVRTQDGTEWTL*ALQACCCYIRGQRQ
Trigger: CTGGCGCTGTCCCCGGATGTAACAACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp GGGATGTGCACCAACTGTGAGGACCCAGGACGGGACTaGATGGACACTCTTGGCCCTCCAGGCATGCTGTTG +
Preference number: 6 (lower is better)
Translates to: GMCTNCEDPGRD*MDTLGPPGMLL
Trigger: CAACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp GGTGGAGTCGCGGGAAGAAGAAATGGACAGCGTCTCTaGGCCAATTTCGCTGCCCTCTACTGGGGTGACGCG +
Preference number: 6 (lower is better)
Translates to: GGVAGRRNGQRL*ANFAALYWGDA
Trigger: CGCGTCACCCCAGTAGAGGGCAGCGAAATTGGCTCAGAGACGCTGTCCATTTCTTCTTCCCGCGACTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp AGCCAGTGCAGGAGACCGTGCTGCCTTCAGTGTTCTTaGGGCTGCTTTGGAGGACACCCTGCTGCTTGGACA +
Preference number: 6 (lower is better)
Translates to: SQCRRPCCLQCS*GCFGGHPAAWT
Trigger: TGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp TGCAGGAGACCGTGCTGCCTTCAGTGTTCTTGGGGCTaGTTTGGAGGACACCCTGCTGCTTGGACATGGCTA +
Preference number: 6 (lower is better)
Translates to: CRRPCCLQCSWG*FGGHPAAWTWL
Trigger: TAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp ACTGTGAGGACCCAGGACGGGACTGAATGGACACTCTaGGCCCTCCAGGCATGCTGTTGTTACATCCGGGGA +
Preference number: 6 (lower is better)
Translates to: TVRTQDGTEWTL*ALQACCCYIRG
Trigger: TCCCCGGATGTAACAACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp GACCATGGTGGTCTCCATTCACCCCTACCCTCGATGGCTCTGAGCTaGACCTCATTTCTATGGATCTGGGTGGTGACTGCCCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: DHGGLHSPLPSMALS*TSFLWIWVVTAQAQ
Trigger: CTGAGCCTGGGCAGTCACCACCCAGATCCATAGAAATGAGGTCAAGCTCAGAGCCATCGAGGGTAGGGGTGAATGGAGACCACCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp GGGGCTGCTTTGGAGGACACCCTGCTGCTTGGACATGGCTATGACTaGCATGATTCGGGGCTGGCTGTTGCTTCTGTTACAGGCCACAGT +
Preference number: 6 (lower is better)
Translates to: GAALEDTLLLGHGYD*HDSGLAVASVTGHS
Trigger: ACTGTGGCCTGTAACAGAAGCAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp GCCAGTGCAGGAGACCGTGCTGCCTTCAGTGTTCTTGGGGCTGCTTaGGAGGACACCCTGCTGCTTGGACATGGCTATGACTTGCATGAT +
Preference number: 6 (lower is better)
Translates to: ASAGDRAAFSVLGAA*EDTLLLGHGYDLHD
Trigger: ATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp GACGGGATCTGTATGATGGGCCTGTTGTTCTCTGGGTaGGCCTCAACCCTCACTATCCCACTGGGCTCATGG +
Preference number: 6 (lower is better)
Translates to: DGICMMGLLFSG*ASTLTIPLGSW
Trigger: CCATGAGCCCAGTGGGATAGTGAGGGTTGAGGCTCACCCAGAGAACAACAGGCCCATCATACAGATCCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp TGTGCACCAACTGTGAGGACCCAGGACGGGACTGAATaGACACTCTTGGCCCTCCAGGCATGCTGTTGTTAC +
Preference number: 6 (lower is better)
Translates to: CAPTVRTQDGTE*TLLALQACCCY
Trigger: GTAACAACAGCATGCCTGGAGGGCCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp AGTGGACGGGATCTGTATGATGGGCCTGTTGTTCTCTaGGTGAGCCTCAACCCTCACTATCCCACTGGGCTC +
Preference number: 6 (lower is better)
Translates to: SGRDLYDGPVVL*VSLNPHYPTGL
Trigger: GAGCCCAGTGGGATAGTGAGGGTTGAGGCTCACCCAGAGAACAACAGGCCCATCATACAGATCCCGTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp CTGCCTTCAGTGTTCTTGGGGCTGCTTTGGAGGACACCCTGCTGCTaGGACATGGCTATGACTTGCATGATTCGGGGCTGGCTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: LPSVFLGLLWRTPCC*DMAMTCMIRGWLLL
Trigger: AAGCAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp GTTTTCCTGAGTCTCCTCAGGGATGTGCACCAACTGTaGGGACCCAGGACGGGACTGAATGGACACTCTTGG +
Preference number: 6 (lower is better)
Translates to: VFLSLLRDVHQL*GPRTGLNGHSW
Trigger: CCAAGAGTGTCCATTCAGTCCCGTCCTGGGTCCTCACAGTTGGTGCACATCCCTGAGGAGACTCAGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp TCAGTGTTCTTGGGGCTGCTTTGGAGGACACCCTGCTaGTTGGACATGGCTATGACTTGCATGATTCGGGGC +
Preference number: 6 (lower is better)
Translates to: SVFLGLLWRTPC*LDMAMTCMIRG
Trigger: GCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp AGGTTTTATAGCGGATGGAGCCAGTGCAGGAGACCGTaGTGCCTTCAGTGTTCTTGGGGCTGCTTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: RFYSGWSQCRRP*CLQCSWGCFGG
Trigger: TCCTCCAAAGCAGCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp CATGGTCTGTCAAGGTTTTATAGCGGATGGAGCCAGTaGAGGAGACCGTGCTGCCTTCAGTGTTCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: HGLSRFYSGWSQ*RRPCCLQCSWG
Trigger: GCCCCAAGAACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCTTGACAGACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp CTACCCTCGATGGCTCTGAGCTTGACCTCATTTCTATaGATCTGGGTGGTGACTGCCCAGGCTCAGGCTCTA +
Preference number: 6 (lower is better)
Translates to: LPSMALSLTSFL*IWVVTAQAQAL
Trigger: TAGAGCCTGAGCCTGGGCAGTCACCACCCAGATCCATAGAAATGAGGTCAAGCTCAGAGCCATCGAGGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp CACTGGGCTCATGGTCTGTCAAGGTTTTATAGCGGATaGAGCCAGTGCAGGAGACCGTGCTGCCTTCAGTGT +
Preference number: 6 (lower is better)
Translates to: HWAHGLSRFYSG*SQCRRPCCLQC
Trigger: ACACTGAAGGCAGCACGGTCTCCTGCACTGGCTCCATCCGCTATAAAACCTTGACAGACCATGAGCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp GGTCTCCATTCACCCCTACCCTCGATGGCTCTGAGCTaGACCTCATTTCTATGGATCTGGGTGGTGACTGCC +
Preference number: 6 (lower is better)
Translates to: GLHSPLPSMALS*TSFLWIWVVTA
Trigger: GGCAGTCACCACCCAGATCCATAGAAATGAGGTCAAGCTCAGAGCCATCGAGGGTAGGGGTGAATGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp TGTTGTTACATCCGGGGACAGCGCCAGGCTGGATTTTaGGGTACTGATTGCCAGGACCATGGTGGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: CCYIRGQRQAGF*GTDCQDHGGLH
Trigger: ATGGAGACCACCATGGTCCTGGCAATCAGTACCTCAAAATCCAGCCTGGCGCTGTCCCCGGATGTAACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp TGGAGGACACCCTGCTGCTTGGACATGGCTATGACTTaGATGATTCGGGGCTGGCTGTTGCTTCTGTTACAG +
Preference number: 6 (lower is better)
Translates to: WRTPCCLDMAMT*MIRGWLLLLLQ
Trigger: CTGTAACAGAAGCAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp CCTTCAGTGTTCTTGGGGCTGCTTTGGAGGACACCCTaGTGCTTGGACATGGCTATGACTTGCATGATTCGG +
Preference number: 6 (lower is better)
Translates to: PSVFLGLLWRTP*CLDMAMTCMIR
Trigger: CCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAAAGCAGCCCCAAGAACACTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp TGTTTTCGGGGCTGTTGCTTCTTTCAGGGATTAGAATaGTATTGCCCTTTCTCCGCAGGGTGGAGTCGCGGG +
Preference number: 6 (lower is better)
Translates to: CFRGCCFFQGLE*YCPFSAGWSRG
Trigger: CCCGCGACTCCACCCTGCGGAGAAAGGGCAATATCATTCTAATCCCTGAAAGAAGCAACAGCCCCGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp TTGGAGGACACCCTGCTGCTTGGACATGGCTATGACTaGCATGATTCGGGGCTGGCTGTTGCTTCTGTTACA +
Preference number: 6 (lower is better)
Translates to: LEDTLLLGHGYD*HDSGLAVASVT
Trigger: TGTAACAGAAGCAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTCCAAGCAGCAGGGTGTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp TCGGGGCTGTTGCTTCTTTCAGGGATTAGAATGATATaGCCCTTTCTCCGCAGGGTGGAGTCGCGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: SGLLLLSGIRMI*PFLRRVESREE
Trigger: TTCTTCCCGCGACTCCACCCTGCGGAGAAAGGGCAATATCATTCTAATCCCTGAAAGAAGCAACAGCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp ACTGGGGTGACGCGGATGGTGGTAATTCCGTGGTGGTaGTGCTCATTGCTATCAATGTTGCTTCTCTTGCGA +
Preference number: 6 (lower is better)
Translates to: TGVTRMVVIPWW*CSLLSMLLLLR
Trigger: TCGCAAGAGAAGCAACATTGATAGCAATGAGCATCACCACCACGGAATTACCACCATCCGCGTCACCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp GCCAAGCTAAGCAACATGAGGAATGGAATTGCCTCCTaGGTTGGTTCAATGTACGGCATGCTAAGACTCCGG +
Preference number: 6 (lower is better)
Translates to: AKLSNMRNGIAS*VGSMYGMLRLR
Trigger: CCGGAGTCTTAGCATGCCGTACATTGAACCAACCCAGGAGGCAATTCCATTCCTCATGTTGCTTAGCTTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp GACATGGCTATGACTTGCATGATTCGGGGCTGGCTGTaGCTTCTGTTACAGGCCACAGTCTTTTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: DMAMTCMIRGWL*LLLQATVFSAA
Trigger: AGCTGCTGAAAAGACTGTGGCCTGTAACAGAAGCAACAGCCAGCCCCGAATCATGCAAGTCATAGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp CTAGTGTTTTCGGGGCTGTTGCTTCTTTCAGGGATTAGAATGATATaGCCCTTTCTCCGCAGGGTGGAGTCGCGGGAAGAAGAAATGGAC +
Preference number: 6 (lower is better)
Translates to: LVFSGLLLLSGIRMI*PFLRRVESREEEMD
Trigger: GTCCATTTCTTCTTCCCGCGACTCCACCCTGCGGAGAAAGGGCAATATCATTCTAATCCCTGAAAGAAGCAACAGCCCCGAAAACACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp ATTCCCCACAGCATACAAGCCCGAAACATACACAGCTaGAAAGGCAGCAAGGGTTGCATGTTGAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: IPHSIQARNIHS*KGSKGCMLRRE
Trigger: TTCCCTTCTCAACATGCAACCCTTGCTGCCTTTGCAGCTGTGTATGTTTCGGGCTTGTATGCTGTGGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457765.6
CDS CCA 72 bp AATGCTCGCATTTCTTCTGACAGGGTCTTCTACAGATaGGGTATTGGCTCGCGGCAAGGTATTGCTGAAGGT +
Preference number: 6 (lower is better)
Translates to: NARISSDRVFYR*GIGSRQGIAEG
Trigger: ACCTTCAGCAATACCTTGCCGCGAGCCAATACCCCATCTGTAGAAGACCCTGTCAGAAGAAATGCGAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp ACGAATCTGACAGCTCGTCTGAGGAAGGAATTGAAGTaGCAGCCTCCAGCATTAATGTTGGGCTCTAGTCCG +
Preference number: 6 (lower is better)
Translates to: TNLTARLRKELK*QPPALMLGSSP
Trigger: CGGACTAGAGCCCAACATTAATGCTGGAGGCTGCAACTTCAATTCCTTCCTCAGACGAGCTGTCAGATTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp GCATTTCTTCTGACAGGGTCTTCTACAGATGGGGTATaGGCTCGCGGCAAGGTATTGCTGAAGGTAACCATG +
Preference number: 6 (lower is better)
Translates to: AFLLTGSSTDGV*ARGKVLLKVTM
Trigger: CATGGTTACCTTCAGCAATACCTTGCCGCGAGCCAATACCCCATCTGTAGAAGACCCTGTCAGAAGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp AGGAGCTGCTTTGATCGAGCGGAATCCATAGAGGCATaGATGCTCGCATTTCTTCTGACAGGGTCTTCTACA +
Preference number: 6 (lower is better)
Translates to: RSCFDRAESIEA*MLAFLLTGSST
Trigger: TGTAGAAGACCCTGTCAGAAGAAATGCGAGCATTCATGCCTCTATGGATTCCGCTCGATCAAAGCAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp TTCATTCTTATTCTTCCACTGGGTGAGGAGCTGCTTTaGTCGAGCGGAATCCATAGAGGCATGAATGCTCGC +
Preference number: 6 (lower is better)
Translates to: FILILPLGEELL*SSGIHRGMNAR
Trigger: GCGAGCATTCATGCCTCTATGGATTCCGCTCGATCAAAGCAGCTCCTCACCCAGTGGAAGAATAAGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp GCTAAGCAACATGAGGAATGGAATTGCCTCCTGGGTTaGTTCAATGTACGGCATGCTAAGACTCCGGTCATA +
Preference number: 6 (lower is better)
Translates to: AKQHEEWNCLLG*FNVRHAKTPVI
Trigger: TATGACCGGAGTCTTAGCATGCCGTACATTGAACCAACCCAGGAGGCAATTCCATTCCTCATGTTGCTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp ATGGGGCTCCGTGGAGTAATGATTTCCACATCAGCATTTGCTCTTTaGAGATTTGTCAGAGAGCTAGCATCTCTGTGGTTTCGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: MGLRGVMISTSAFAL*RFVRELASLWFRLR
Trigger: CCTCAACCGAAACCACAGAGATGCTAGCTCTCTGACAAATCTCAAAAGAGCAAATGCTGATGTGGAAATCATTACTCCACGGAGCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp ACATACACAGCTGCAAAGGCAGCAAGGGTTGCATGTTaGGAAGGGAAGGACTTTCTGCCACTGTTGATAACT +
Preference number: 6 (lower is better)
Translates to: TYTAAKAARVAC*EGKDFLPLLIT
Trigger: AGTTATCAACAGTGGCAGAAAGTCCTTCCCTTCTCAACATGCAACCCTTGCTGCCTTTGCAGCTGTGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp CTGGGTGGTGACTGCCCAGGCTCAGGCTCTATAACTTaGAAGGACAACTTTCGACTTTCATTCTTATTCTTC +
Preference number: 6 (lower is better)
Translates to: LGGDCPGSGSIT*KDNFRLSFLFF
Trigger: GAAGAATAAGAATGAAAGTCGAAAGTTGTCCTTGCAAGTTATAGAGCCTGAGCCTGGGCAGTCACCACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp GCATCTCTGTGGTTTCGGTTGAGGATGCCTTCTGTATaGGCAATTCCATCACTGCTGCTACCATTTTTAGCA +
Preference number: 6 (lower is better)
Translates to: ASLWFRLRMPSV*AIPSLLLPFLA
Trigger: TGCTAAAAATGGTAGCAGCAGTGATGGAATTGCTCATACAGAAGGCATCCTCAACCGAAACCACAGAGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CCA 72 bp AAGGACAACTTTCGACTTTCATTCTTATTCTTCCACTaGGTGAGGAGCTGCTTTGATCGAGCGGAATCCATA +
Preference number: 6 (lower is better)
Translates to: KDNFRLSFLFFH*VRSCFDRAESI
Trigger: TATGGATTCCGCTCGATCAAAGCAGCTCCTCACCCAGTGGAAGAATAAGAATGAAAGTCGAAAGTTGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp ATCTGTGAGTTCGAGGAAATAGAGGCTAACCACCGATaGTGCCAATATAGGCAACTCGACGAAATAAAAGCA +
Preference number: 6 (lower is better)
Translates to: ICEFEEIEANHR*CQYRQLDEIKA
Trigger: TGCTTTTATTTCGTCGAGTTGCCTATATTGGCATCATCGGTGGTTAGCCTCTATTTCCTCGAACTCACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp TGGAACAGAACACAGGTAGAATCAACATATGGTCTTTaGCGAGTAGCCCTAATGATGGAATGGACATCACTC +
Preference number: 6 (lower is better)
Translates to: WNRTQVESTYGL*RVALMMEWTSL
Trigger: GAGTGATGTCCATTCCATCATTAGGGCTACTCGCAAAAGACCATATGTTGATTCTACCTGTGTTCTGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 90 bp CCAATTCGCTGGAACAGAACACAGGTAGAATCAACATATGGTCTTTaGCGAGTAGCCCTAATGATGGAATGGACATCACTCAATCCTTAT +
Preference number: 6 (lower is better)
Translates to: PIRWNRTQVESTYGL*RVALMMEWTSLNPY
Trigger: ATAAGGATTGAGTGATGTCCATTCCATCATTAGGGCTACTCGCAAAAGACCATATGTTGATTCTACCTGTGTTCTGTTCCAGCGAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS CAA 72 bp CGTGGAGTAATGATTTCCACATCAGCATTTGCTCTTTaGAGATTTGTCAGAGAGCTAGCATCTCTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: RGVMISTSAFAL*RFVRELASLWF
Trigger: AAACCACAGAGATGCTAGCTCTCTGACAAATCTCAAAAGAGCAAATGCTGATGTGGAAATCATTACTCCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS GCA 72 bp CTTTGCAAGATACATTCAGAGAGGTATAGTTTGGTTTaGACACAGTCAGAAAGTAAGGTGCTTGATATCCTG +
Preference number: 6 (lower is better)
Translates to: LCKIHSERYSLV*TQSESKVLDIL
Trigger: CAGGATATCAAGCACCTTACTTTCTGACTGTGTGCAAACCAAACTATACCTCTCTGAATGTATCTTGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp CTTTCTGCCACTGTTGATAACTGTGAGGTCAGATCCTaGGCAAATATCTTCCACAATGTAGGAATTTTCTTT +
Preference number: 6 (lower is better)
Translates to: LSATVDNCEVRS*ANIFHNVGIFF
Trigger: AAAGAAAATTCCTACATTGTGGAAGATATTTGCTCAGGATCTGACCTCACAGTTATCAACAGTGGCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370184.1
ENST00000370185.9
ENST00000457765.6
CDS TCA 72 bp TCTGTAATGAGAGCTGTAGAGCATAATCCAAATACATaGACACCTATAGGCAAAATGAAAGAAATTGTTACC +
Preference number: 6 (lower is better)
Translates to: SVMRAVEHNPNT*TPIGKMKEIVT
Trigger: GGTAACAATTTCTTTCATTTTGCCTATAGGTGTTCATGTATTTGGATTATGCTCTACAGCTCTCATTACAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370184.1