RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLOD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000106397

Ensembl transcript IDs: ENST00000223127.8, ENST00000414785.5, ENST00000421736.1, ENST00000424135.5, ENST00000440925.1, ENST00000454310.5, ENST00000456079.1, ENST00000460132.5, ENST00000460475.1, ENST00000463479.1, ENST00000466881.1, ENST00000478082.5, ENST00000478264.1, ENST00000481461.1, ENST00000487563.1, ENST00000489927.1

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTTCCAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTaGAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCA +
Preference number: 1 (lower is better)
Translates to: SFQSTGLSKICQRSG*RCSVSYLEVARSRP
Trigger: TGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR GCA 90 bp CAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTaGTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCA +
Preference number: 1 (lower is better)
Translates to: QSTGLSKICQRSGCR*SVSYLEVARSRPNS
Trigger: TGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR CCA 90 bp GGAGAGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTaGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAAC +
Preference number: 1 (lower is better)
Translates to: GERRGLRELPERAVS*EQGDIFSSGTRNMN
Trigger: GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR CCA 90 bp TCTGCCAGAGGTCGGGGTGCAGGTGCTCCGTGTCGTATCTGGAAGTaGCCAGGAGCCGGCCAAATTCATGCTGATTGCTCAGATGGAGGA +
Preference number: 1 (lower is better)
Translates to: SARGRGAGAPCRIWK*PGAGQIHADCSDGG
Trigger: TCCTCCATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR GCA 90 bp TGTCTCGAAAGCTCTTACAGAAGGCCATGTCCGGGTCTGTGTCACTaGCCGAGAACACATCCCTCTGGGGCAGCTCCATCCGCAGGGTAT +
Preference number: 1 (lower is better)
Translates to: CLESSYRRPCPGLCH*PRTHPSGAAPSAGY
Trigger: ATACCCTGCGGATGGAGCTGCCCCAGAGGGATGTGTTCTCGGGCAGTGACACAGACCCGGACATGGCCTTCTGTAAGAGCTTTCGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR CCA 90 bp CGAAGATCTGCCAGAGGTCGGGGTGCAGGTGCTCCGTGTCGTATCTaGAAGTGGCCAGGAGCCGGCCAAATTCATGCTGATTGCTCAGAT +
Preference number: 1 (lower is better)
Translates to: RRSARGRGAGAPCRI*KWPGAGQIHADCSD
Trigger: ATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR TCA 90 bp TGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATaGACTCAGGAAGTGGGGAGACAGAGAGACCCATCCCCCAACTCC +
Preference number: 1 (lower is better)
Translates to: CLGSKVTYSVQARGT*TQEVGRQRDPSPNS
Trigger: GGAGTTGGGGGATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR TCA 90 bp TCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCATGCTaGTTGCTCAGATGGAGGAAGATGCCCTTGTCTCGAAAGCTCTTA +
Preference number: 1 (lower is better)
Translates to: SVSYLEVARSRPNSC*LLRWRKMPLSRKLL
Trigger: TAAGAGCTTTCGAGACAAGGGCATCTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR GCA 90 bp TGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCATGCTGATTaGTCAGATGGAGGAAGATGCCCTTGTCTCGAAAGCTCTTACAGA +
Preference number: 1 (lower is better)
Translates to: CRIWKWPGAGQIHAD*SDGGRCPCLESSYR
Trigger: TCTGTAAGAGCTTTCGAGACAAGGGCATCTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR-3UTR CCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCGAGAGGGCCGTGTCTTaGGAGCAAGGTGACATATTC +
Preference number: 2 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSERAVS*EQGDIF
Trigger: GAATATGTCACCTTGCTCCCAAGACACGGCCCTCTC...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR-3UTR CCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCCCTAAAAAGGCACAATaGCAGGGCAGGTTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSPKKAQ*QGRFGR
Trigger: TCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGG...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR-3UTR TCA 90 bp GGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACACAGGCACGCGGAACATaGACTCAGGAAGTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GGDSGSFLRGPCLGSKVTQARGT*TQEVGR
Trigger: TCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTG...TGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR-3UTR CCA 90 bp GGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACACCTAAAAAGGCACAATaGCAGGGCAGGTTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGDSGSFLRGPCLGSKVTPKKAQ*QGRFGR
Trigger: TCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGG...TGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR-3UTR TCA 90 bp ATGGACCACAATGGGGAGCGTGTCGTAGGCCACGTTCCGGATACGCACACGGTTCATCTAAAGCCCCGTTaGGGTTCTGAAAGATCCGAG +
Preference number: 2 (lower is better)
Translates to: MDHNGERVVGHVPDTHTVHLKPR*GSERSE
Trigger: CTCGGATCTTTCAGAACCTCAACGGGGCTTTAGATG...AACCGTGTGCGTATCCGGAACGTGGCCTACGACACGCTCCCCATTGTGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
3UTR-3UTR GCA 90 bp TCCTTCCAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTGCCAAATTCATGCTGATTaGTCAGATGGAGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: SFQSTGLSKICQRSGCRCQIHAD*SDGGRC
Trigger: GCATCTTCCTCCATCTGAGCAATCAGCATGAATTTG...GCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR-3UTR TCA 90 bp GACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCGTCTTGGGAGCAAGGTaGCATATTCAGTTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: DCGTLIIYHAGSPQKPCAVLGAR*HIQFRH
Trigger: GTGCCTGAACTGAATATGTCACCTTGCTCCCAAGAC...GGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR-3UTR CCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACATGAACTCAGGAAGTaGGGAGACAGAGAGACCCAT +
Preference number: 2 (lower is better)
Translates to: LRNINNLSRGESPEALCPHELRK*GDRETH
Trigger: ATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATG...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR-3UTR CCA 90 bp TGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGCATGAACTCAGGAAGTaGGGAGACAGAGAGACCCAT +
Preference number: 2 (lower is better)
Translates to: CPLFRVRLRNINNLSRGEHELRK*GDRETH
Trigger: ATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATG...CTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR-3UTR TCA 90 bp ATACGCACACGGTTCCGATCAAACTTTAAAACCACTTCATCTAAAGCCCCGTTGAAGATCCGAGACTTATaGTCCAGATTAAGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: IRTRFRSNFKTTSSKAPLKIRDL*SRLRLS
Trigger: ACTCAGCCTTAATCTGGATCATAAGTCTCGGATCTT...CAACGGGGCTTTAGATGAAGTGGTTTTAAAGTTTGATCGGAACCGTGTGCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
3UTR GCA 72 bp GGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTaGTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGG +
Preference number: 3 (lower is better)
Translates to: GLSKICQRSGCR*SVSYLEVARSR
Trigger: CCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR CCA 72 bp TCCGGGTCTGTGTCACTGCCCGAGAACACATCCCTCTaGGGCAGCTCCATCCGCAGGGTATCACCCCGGATC +
Preference number: 3 (lower is better)
Translates to: SGSVSLPENTSL*GSSIRRVSPRI
Trigger: GATCCGGGGTGATACCCTGCGGATGGAGCTGCCCCAGAGGGATGTGTTCTCGGGCAGTGACACAGACCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR GCA 72 bp TCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTaGAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: STGLSKICQRSG*RCSVSYLEVAR
Trigger: CCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR CCA 72 bp CGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTaGGAGCAAGGTGACATATTCAGTTCAGGCACGCGG +
Preference number: 3 (lower is better)
Translates to: RGLRELPERAVS*EQGDIFSSGTR
Trigger: CCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR CCA 72 bp GCCAGAGGTCGGGGTGCAGGTGCTCCGTGTCGTATCTaGAAGTGGCCAGGAGCCGGCCAAATTCATGCTGAT +
Preference number: 3 (lower is better)
Translates to: ARGRGAGAPCRI*KWPGAGQIHAD
Trigger: ATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR CCA 72 bp GGTCGGGGTGCAGGTGCTCCGTGTCGTATCTGGAAGTaGCCAGGAGCCGGCCAAATTCATGCTGATTGCTCA +
Preference number: 3 (lower is better)
Translates to: GRGAGAPCRIWK*PGAGQIHADCS
Trigger: TGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR-3UTR CAA 90 bp GGGTGCAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCATGGAGGAAGATGCCCTaGTCTCGAAAGCTCTTACAG +
Preference number: 3 (lower is better)
Translates to: GCRCSVSYLEVARSRPNSWRKMP*SRKLLQ
Trigger: CTGTAAGAGCTTTCGAGACAAGGGCATCTTCCTCCA...TGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR GCA 72 bp TGGAAGTGGCCAGGAGCCGGCCAAATTCATGCTGATTaGTCAGATGGAGGAAGATGCCCTTGTCTCGAAAGC +
Preference number: 3 (lower is better)
Translates to: WKWPGAGQIHAD*SDGGRCPCLES
Trigger: GCTTTCGAGACAAGGGCATCTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
3UTR TCA 72 bp AGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATaGACTCAGGAAGTGGGGAGACAGAGAGACCCATCC +
Preference number: 3 (lower is better)
Translates to: SKVTYSVQARGT*TQEVGRQRDPS
Trigger: GGATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
3UTR TCA 72 bp TATCTGGAAGTGGCCAGGAGCCGGCCAAATTCATGCTaGTTGCTCAGATGGAGGAAGATGCCCTTGTCTCGA +
Preference number: 3 (lower is better)
Translates to: YLEVARSRPNSC*LLRWRKMPLSR
Trigger: TCGAGACAAGGGCATCTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp AAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGACCGCCCGCGCCTCATaGCGGCCGCCTGACCACTGG +
Preference number: 4 (lower is better)
Translates to: KPCAHEPLWAEERGGDSGTARAS*RPPDHW
Trigger: CCAGTGGTCAGGCGGCCGGCATGAGGCGCGGGCGGT...CCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454310.5
CDS-3UTR GCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCGGAAGCGCTTCCCCGTaGCCACCTCAGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSGSASP*PPQGTA
Trigger: AGCAGTACCCTGAGGTGGGCACGGGGAAGCGCTTCC...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCTCACACTCGGGGTCCTaGCGACACAGGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSSHSGS*RHRSMA
Trigger: GGCCATGGACCTGTGTCGGCAGGACCCCGAGTGTGA...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp GGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACAGTGAGGCGGCCGGGGTaGAGGAGTGCCCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GGDSGSFLRGPCLGSKVTVRRPG*RSAQPF
Trigger: GAAGGGCTGGGCACTCCTGCACCCCGGCCGCCTCAC...TGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCCGACAAAGGACACCATaGTGTAGCGTGTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSRQRTP*CSVCPR
Trigger: CCTGGGGCACACGCTACATCATGGTGTCCTTTGTCG...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp AAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGTCCTCCGGTCCTGGTTaGAGAAGCCACAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KPCAHEPLWAEERGGDSGSSGPG*RSHSLP
Trigger: AGGGAGGCTGTGGCTTCTGCAACCAGGACCGGAGGA...CCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp AAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGTACGTCCGCAGCAGCTaGAGCCACTGGTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: KPCAHEPLWAEERGGDSGYVRSS*SHWSSY
Trigger: GTACGAGGACCAGTGGCTGCAGCTGCTGCGGACGTA...CCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp CTGCCCGAGAACACATCCCTCTGGGGCAGCTCCATCCGCAGGGTATCACCCCGGGGGTCTGCAGGTTGGTaGGGACAGCGTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LPENTSLWGSSIRRVSPRGSAGW*GQRRRP
Trigger: TGGACGCCGACGCTGTCCTCACCAACCTGCAGACCC...CCGGGGTGATACCCTGCGGATGGAGCTGCCCCAGAGGGATGTGTTCTCGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCTCCTCGTACCCCACCTaGTTCATGTGGATGTCCACG +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSSSYPT*FMWMST
Trigger: CGTGGACATCCACATGAAGCAGGTGGGGTACGAGGA...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp AGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGTCCCCAGAAGCCCTGTaGCCACGAACCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGGDSGSFLRGPCLGSKVSPEAL*PRTPVG
Trigger: GCCCACAGGGGTTCGTGGGCACAGGGCTTCTGGGGA...CACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCCAGGAGTCAGCGATGTaGGGTTCATGGAAGACCTCG +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSQESAM*GSWKTS
Trigger: CGAGGTCTTCCATGAACCCCACATCGCTGACTCCTG...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp AAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGACGGCTGCTCGTCTaGCCGGTAGCGAACCACAAA +
Preference number: 4 (lower is better)
Translates to: KPCAHEPLWAEERGGDSGRRLLV*PVANHK
Trigger: TTTGTGGTTCGCTACCGGCCAGACGAGCAGCCGTCT...CCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCGCAGGTTTGGCAGAGTaGTTGAGTGTCAGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSAGLAE*LSVRGR
Trigger: TCGACCCCTGACACTCAACCACTCTGCCAAACCTGC...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCTGTCGTATCTGGAAGTaGCCAGGAGCCGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSCRIWK*PGAGQI
Trigger: AATTTGGCCGGCTCCTGGCCACTTCCAGATACGACA...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp AAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGGCAGGTTTGGCAGAGTaGTTGAGTGTCAGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: KPCAHEPLWAEERGGDSGAGLAE*LSVRGR
Trigger: TCGACCCCTGACACTCAACCACTCTGCCAAACCTGC...CCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp AGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACAGGGACTCTGGGCTaGGCCAGCCGCTTGACACAT +
Preference number: 4 (lower is better)
Translates to: RGGDSGSFLRGPCLGSKVTGTLG*ASRLTH
Trigger: ATGTGTCAAGCGGCTGGCTCAGCCCAGAGTCCCTGT...CACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCCGGCCAAATTCATGCTaGTTGCTCAGATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSRPNSC*LLRWRK
Trigger: CTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCG...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp GGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACAGGGTTGTCGAAGATCTaGCAGAGGTCGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGDSGSFLRGPCLGSKVTGLSKI*QRSGCR
Trigger: CCTGCACCCCGACCTCTGGCAGATCTTCGACAACCC...TGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp GGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACAAAGGTGGATGAGTCGTaGTGTGGCCGCAGAGACGGC +
Preference number: 4 (lower is better)
Translates to: GGDSGSFLRGPCLGSKVTKVDES*CGRRDG
Trigger: GCCGTCTCTGCGGCCACACCACGACTCATCCACCTT...TGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp CCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTCCTCGTGGTAGTGGGTaGGGCGGCCGGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGPLKRHNGRAGLAEWLSPRGSG*GGRGAG
Trigger: TCCTGCACCCCGGCCGCCTCACCCACTACCACGAGG...ACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp GGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACACCGGGTCTGTGTCACTaGCCGAGAACACATCCCTCT +
Preference number: 4 (lower is better)
Translates to: GGDSGSFLRGPCLGSKVTPGLCH*PRTHPS
Trigger: AGAGGGATGTGTTCTCGGGCAGTGACACAGACCCGG...TGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp AGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGTCTTCAGCAGCTCTGTaGGGCTGCCGGCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: RGGDSGSFLRGPCLGSKVSSAAL*GCRPES
Trigger: TGATTCTGGCCGGCAGCCCCACAGAGCTGCTGAAGA...CACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp CCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTGTCCCTGGCCTCGCCTaGGCTCAGAGCCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGPLKRHNGRAGLAEWLSVPGLA*AQSLLR
Trigger: CCGGAGGAGGCTCTGAGCCCAGGCGAGGCCAGGGAC...ACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp CTCCTTCCAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTGCGTGGCGGGACAGCATaGGGGCGATCACCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLPVDGVVEDLPEVGVQVRGGTA*GRSPSC
Trigger: ACAGGAAGGTGATCGCCCCCATGCTGTCCCGCCACG...CACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR CCA 90 bp AGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGCCCACCTGCTTCATGTaGATGTCCACGGTGGGCACA +
Preference number: 4 (lower is better)
Translates to: RGGDSGSFLRGPCLGSKVPTCFM*MSTVGT
Trigger: TGTGCCCACCGTGGACATCCACATGAAGCAGGTGGG...CACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp AGGCCTGGGAGATGTATGGTACATTCCACACACCCCTGGGCCCCGGGTCGGAGGAGGATACGCAGGGTCTaGAGGTTGGTGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: RPGRCMVHSTHPWAPGRRRIRRV*RLVRTA
Trigger: CGCTGTCCTCACCAACCTGCAGACCCTGCGTATCCT...CCTCCGACCCGGGGCCCAGGGGTGTGTGGAATGTACCATACATCTCCCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp AAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGTCAGATGGAGGAAGATaGCCTTGTCTCGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KPCAHEPLWAEERGGDSGSDGGR*PCLESS
Trigger: AGAGCTTTCGAGACAAGGGCATCTTCCTCCATCTGA...CCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp CCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTCCGAGGAGGTCATGGTaGGGAGCGGGCCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PGPLKRHNGRAGLAEWLSPRRSW*GAGPDS
Trigger: GCTGTCTGGGCCCGCTCCCCACCATGACCTCCTCGG...ACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATTCCATGGACCACAATaGGGAGCGTGTCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGDSGSFLRGPCLGSKVTFHGPQ*GACRRP
Trigger: TGGCCTACGACACGCTCCCCATTGTGGTCCATGGAA...TGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GGGTGCAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCAGCTCCGTGTCGTATCTaGAAGTGGCCAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GCRCSVSYLEVARSRPNSAPCRI*KWPGAG
Trigger: GCCGGCTCCTGGCCACTTCCAGATACGACACGGAGC...TGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR TCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCAGCAGCTTCTCTGGGTTaGCCGGGTCTCGGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPAASLG*PGLGPG
Trigger: CCCGGGGCCGAGACCCGGTCAACCCAGAGAAGCTGC...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp CCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGAGCCAAATTCATGCTGATTaGTCAGATGGAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: PCAHEPLWAEERGGDSGSQIHAD*SDGGRC
Trigger: GCATCTTCCTCCATCTGAGCAATCAGCATGAATTTG...GCTCCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp CTGCAGCTTAGTGGGACCGTTTCCATGGACCACAATGGGGAGCGTGTCGTAGGCGAATCCTCAGGGTACTaGTCCGCCAGCCCCCACTCG +
Preference number: 4 (lower is better)
Translates to: LQLSGTVSMDHNGERVVGESSGY*SASPHS
Trigger: CGAGTGGGGGCTGGCGGAGCAGTACCCTGAGGATTC...GCCTACGACACGCTCCCCATTGTGGTCCATGGAAACGGTCCCACTAAGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp TGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGCCCCGAGGAGGTCATaGTGGGGAGCGGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: CGTLIIYHAGSPQKPCAHAPRRS*WGAGPD
Trigger: GTCTGGGCCCGCTCCCCACCATGACCTCCTCGGGGC...GTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp CCGGGTCTGTGTCACTGCCCGAGAACACATCCCTCTGGGGCAGCTCCATCCGCATCCTGTTCTCCTCAATaGGGATACGCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGLCHCPRTHPSGAAPSASCSPQ*GYAGSA
Trigger: TGCAGACCCTGCGTATCCTCATTGAGGAGAACAGGA...TGCGGATGGAGCTGCCCCAGAGGGATGTGTTCTCGGGCAGTGACACAGACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp GACCACAATGGGGAGCGTGTCGTAGGCCACGTTCCGGATACGCACACGGTTCCGAGAAGAGCAGGCGGCTaGCACTCTGGACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: DHNGERVVGHVPDTHTVPRRAGG*HSGRTS
Trigger: AGAAGTTCGTCCAGAGTGGCAGCCGCCTGCTCTTCT...CGGAACCGTGTGCGTATCCGGAACGTGGCCTACGACACGCTCCCCATTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR GCA 90 bp TGCAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCATGCTGCCAGAGGTCGGGGTaGAGGTGCTCCGTGTCGTAT +
Preference number: 4 (lower is better)
Translates to: CRCSVSYLEVARSRPNSCCQRSG*RCSVSY
Trigger: ATACGACACGGAGCACCTGCACCCCGACCTCTGGCA...GCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR CCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCTCCGCTACGCGCCTaGATCCCAGCTCCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNSPLRA*IPAPEG
Trigger: CCCCTCCGGAGCTGGGATCCAGGCGCGTAGCGGAGA...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp TGCAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCATGCGAGAACACATCCCTCTaGGGCAGCTCCATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: CRCSVSYLEVARSRPNSCENTSL*GSSIRR
Trigger: CCTGCGGATGGAGCTGCCCCAGAGGGATGTGTTCTC...GCATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR CCA 90 bp CCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTGCTCCGTGTCGTATCTaGAAGTGGCCAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PGPLKRHNGRAGLAEWLSAPCRI*KWPGAG
Trigger: GCCGGCTCCTGGCCACTTCCAGATACGACACGGAGC...ACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACGGGTCTGCAGGTTGGTaGGGACAGCGTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNGSAGW*GQRRRP
Trigger: TGGACGCCGACGCTGTCCTCACCAACCTGCAGACCC...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp AGACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCTCATGCCGGCCGCCTaGCCACTGGCCGTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLRNINNLSRGESPEALCLMPAA*PLAVVL
Trigger: GAGCACTACGGCCAGTGGTCAGGCGGCCGGCATGAG...GCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp GGTGCAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCATCCGGGTCTGTGTCACTaGCCGAGAACACATCCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGAPCRIWKWPGAGQIHPGLCH*PRTHPS
Trigger: AGAGGGATGTGTTCTCGGGCAGTGACACAGACCCGG...ATGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCATCCCCAGAAGCCCTGTaGCCACGAACCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPSPEAL*PRTPVG
Trigger: GCCCACAGGGGTTCGTGGGCACAGGGCTTCTGGGGA...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACACCGCGGGGAGCAGCTTaGCTGGGGCTACGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETPRGAA*LGLRPE
Trigger: TTCAGGGCGTAGCCCCAGCCAAGCTGCTCCCCGCGG...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp CAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGTCCGGAGGGGAGCTCTaGAAAGGGGGCGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: QGDIFSSGTRNMNSGSGESGGEL*KGGARA
Trigger: AGCCCGAGCGCCCCCTTTCCAGAGCTCCCCTCCGGA...CTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCCAGCACCCAGGATCCTaGGATCTCCGCTACGCGCCT +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGQHPGS*DLRYAP
Trigger: AGGCGCGTAGCGGAGATCCCAGGATCCTGGGTGCTG...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCAGCCGACACAGGTCCATaGCCATGTCCCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPADTGP*PCPWPR
Trigger: GCGAGGCCAGGGACATGGCCATGGACCTGTGTCGGC...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp CTTCCAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTGCTCTGTCGTATCTGGAAGTaGCCAGGAGCCGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: LPVDGVVEDLPEVGVQVLCRIWK*PGAGQI
Trigger: AATTTGGCCGGCTCCTGGCCACTTCCAGATACGACA...GAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR TCA 90 bp GACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCGAGGGTGAAGGTGGATaGGTCGTGGTGTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: DCGTLIIYHAGSPQKPCAEGEGG*VVVWPQ
Trigger: CTGCGGCCACACCACGACTCATCCACCTTCACCCTC...GGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp TGGGACCGTTTCCATGGACCACAATGGGGAGCGTGTCGTAGGCCACGTTCCGGATGGTGGCAAAACCGATaGATCCTCAGGGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: WDRFHGPQWGACRRPRSGWWQNR*ILRVLL
Trigger: GAGCAGTACCCTGAGGATTCATCGGTTTTGCCACCA...TCCGGAACGTGGCCTACGACACGCTCCCCATTGTGGTCCATGGAAACGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR GCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCTGCCAGAGGTCGGGGTaGAGGTGCTCCGTGTCGTAT +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGCQRSG*RCSVSY
Trigger: ATACGACACGGAGCACCTGCACCCCGACCTCTGGCA...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCAGCCTTGAATCCTCATaGCGGCCGCCTGACCACTGG +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGSLESS*RPPDHW
Trigger: CCAGTGGTCAGGCGGCCGGCATGAGGATTCAAGGCT...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp ATGGACCACAATGGGGAGCGTGTCGTAGGCCACGTTCCGGATACGCACACGGTTTGGCGCACGATTTGGTaGATGGTGGTGGCAAAACCG +
Preference number: 4 (lower is better)
Translates to: MDHNGERVVGHVPDTHTVWRTIW*MVVAKP
Trigger: CGGTTTTGCCACCACCATCCACCAAATCGTGCGCCA...AACCGTGTGCGTATCCGGAACGTGGCCTACGACACGCTCCCCATTGTGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp GACCACAATGGGGAGCGTGTCGTAGGCCACGTTCCGGATACGCACACGGTTCCGTCCTTGTACTTCCACTaGCGCACGATTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: DHNGERVVGHVPDTHTVPSLYFH*RTIWWM
Trigger: CATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGA...CGGAACCGTGTGCGTATCCGGAACGTGGCCTACGACACGCTCCCCATTGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACCGTGGCGGGACAGCATaGGGGCGATCACCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNRGGTA*GRSPSC
Trigger: ACAGGAAGGTGATCGCCCCCATGCTGTCCCGCCACG...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp ACTGCTCCTTCCAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCACGGCCAAATTCATGCTaGTTGCTCAGATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TAPSSRRGCRRSARGRGARPNSC*LLRWRK
Trigger: CTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCG...TGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAGGAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR TCA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACAGAGGGTGAAGGTGGATaGGTCGTGGTGTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETEGEGG*VVVWPQ
Trigger: CTGCGGCCACACCACGACTCATCCACCTTCACCCTC...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCCGACAAAGGACACCATaGTGTAGCGTGTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGRQRTP*CSVCPR
Trigger: CCTGGGGCACACGCTACATCATGGTGTCCTTTGTCG...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp CCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTAGAAGAGCAGGCGGCTaGCACTCTGGACGAACTTCT +
Preference number: 4 (lower is better)
Translates to: PGPLKRHNGRAGLAEWLSRRAGG*HSGRTS
Trigger: AGAAGTTCGTCCAGAGTGGCAGCCGCCTGCTCTTCT...ACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCAAGGAGTAGCAGCCGCTaGAGGAAGCGGGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPRSSSR*RKRGRN
Trigger: GTTTCTGCCCCGCTTCCTGCAGCGGCTGCTACTCCT...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCAGGTCGGGGTGCAGGTaGTCCGTGTCGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGRSGCR*SVSYLE
Trigger: TTCCAGATACGACACGGAGCACCTGCACCCCGACCT...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp CCGCAGGGTATCACCCCGGATCACATAGGCCTGGGAGATGTATGGTACATTCCAAGGTCGGGGTGCAGGTaGTCCGTGTCGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: PQGITPDHIGLGDVWYIPRSGCR*SVSYLE
Trigger: TTCCAGATACGACACGGAGCACCTGCACCCCGACCT...TGGAATGTACCATACATCTCCCAGGCCTATGTGATCCGGGGTGATACCCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp TGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACTGCCAGAGGTCGGGGTaGAGGTGCTCCGTGTCGTAT +
Preference number: 4 (lower is better)
Translates to: CGTLIIYHAGSPQKPCAHCQRSG*RCSVSY
Trigger: ATACGACACGGAGCACCTGCACCCCGACCTCTGGCA...GTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp TGGGGAGCGTGTCGTAGGCCACGTTCCGGATACGCACACGGTTCCGATCAAACTCACTGGCGCACGATTTaGTGGATGGTGGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: WGACRRPRSGYAHGSDQTHWRTI*WMVVAK
Trigger: TTTTGCCACCACCATCCACCAAATCGTGCGCCAGTG...AGTTTGATCGGAACCGTGTGCGTATCCGGAACGTGGCCTACGACACGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp CAGGTAGTTGAGCTGCAGCTTAGTGGGACCGTTTCCATGGACCACAATGGGGAGGTGGGACCGTTTCCATaGACCACAATGGGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: QVVELQLSGTVSMDHNGEVGPFP*TTMGSV
Trigger: CACGCTCCCCATTGTGGTCCATGGAAACGGTCCCAC...CTCCCCATTGTGGTCCATGGAAACGGTCCCACTAAGCTGCAGCTCAACTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACAAGCAGCTGCAGCCACTaGTCCTCGTACCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETSSCSH*SSYPTC
Trigger: GCAGGTGGGGTACGAGGACCAGTGGCTGCAGCTGCT...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp ACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAACCCACAGGCTCTCGGTCATaGGGCCCACATACGTCCGCA +
Preference number: 4 (lower is better)
Translates to: TLIIYHAGSPQKPCAHEPTGSRS*GPHTSA
Trigger: TGCGGACGTATGTGGGCCCCATGACCGAGAGCCTGT...GGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCTCACCGCCCGCGCCTTaGTGTGGTAACCGGGAAACA +
Preference number: 4 (lower is better)
Translates to: DCGTLIIYHAGSPQKPCASPPAP*CGNRET
Trigger: TGTTTCCCGGTTACCACACCAAGGCGCGGGCGGTGA...GGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp ACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAACCCAAGGTGGATGAGTCGTaGTGTGGCCGCAGAGACGGC +
Preference number: 4 (lower is better)
Translates to: TLIIYHAGSPQKPCAHEPKVDES*CGRRDG
Trigger: GCCGTCTCTGCGGCCACACCACGACTCATCCACCTT...GGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp GGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCCATCTAAAGCCCCGTTaGGGTTCTGAAAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: GLRELPERAVSWEQGDIFHLKPR*GSERSE
Trigger: CTCGGATCTTTCAGAACCTCAACGGGGCTTTAGATG...GAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp AGACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCGTCGGCGTCCAGGCTaGAGTAGAACTCACACTCGG +
Preference number: 4 (lower is better)
Translates to: RLRNINNLSRGESPEALCRRRPG*SRTHTR
Trigger: CCGAGTGTGAGTTCTACTTCAGCCTGGACGCCGACG...GCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp GGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCGTCTTGGGAGCAAGGTaGCATATTCAGTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLRELPERAVSWEQGDIFVLGAR*HIQFRH
Trigger: GTGCCTGAACTGAATATGTCACCTTGCTCCCAAGAC...GAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCAAGGATACGCAGGGTCTaGAGGTTGGTGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPRIRRV*RLVRTA
Trigger: CGCTGTCCTCACCAACCTGCAGACCCTGCGTATCCT...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp ACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAACCCCCGGGTCTGTGTCACTaGCCGAGAACACATCCCTCT +
Preference number: 4 (lower is better)
Translates to: TLIIYHAGSPQKPCAHEPPGLCH*PRTHPS
Trigger: AGAGGGATGTGTTCTCGGGCAGTGACACAGACCCGG...GGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp ACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAACCCAGGTCGGGGTGCAGGTaGTCCGTGTCGTATCTGGAA +
Preference number: 4 (lower is better)
Translates to: TLIIYHAGSPQKPCAHEPRSGCR*SVSYLE
Trigger: TTCCAGATACGACACGGAGCACCTGCACCCCGACCT...GGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp CAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGGGGTTGTCGAAGATCTaGCAGAGGTCGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGDIFSSGTRNMNSGSGEGLSKI*QRSGCR
Trigger: CCTGCACCCCGACCTCTGGCAGATCTTCGACAACCC...CTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCAGTGGGACCGTTTCCATaGACCACAATGGGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPVGPFP*TTMGSV
Trigger: CACGCTCCCCATTGTGGTCCATGGAAACGGTCCCAC...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCCAGGAGTCCAGCCATTaGGGACGTAGTTTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGQESSH*GRSFPG
Trigger: ACCTGGGAAACTACGTCCCCAATGGCTGGACTCCTG...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACAGAGAACACATCCCTCTaGGGCAGCTCCATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETENTSL*GSSIRR
Trigger: CCTGCGGATGGAGCTGCCCCAGAGGGATGTGTTCTC...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp GGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCCCTAAAAAGGCACAATaGCAGGGCAGGTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLRELPERAVSWEQGDIFPKKAQ*QGRFGR
Trigger: TCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGG...GAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp CAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGCAGCTGTGGCCACAGTaGTCACCAGCAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGDIFSSGTRNMNSGSGEQLWPQ*SPAASL
Trigger: CAGAGAAGCTGCTGGTGATCACTGTGGCCACAGCTG...CTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCCGCACAGTGTAGTTaGAGAACTCCGCAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNSAQCS*RTPQSA
Trigger: TGCGCTCTGCGGAGTTCTTCAACTACACTGTGCGGA...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCTCCTGTTCTCCTCAATaGGGATACGCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGSCSPQ*GYAGSA
Trigger: TGCAGACCCTGCGTATCCTCATTGAGGAGAACAGGA...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp GGCCAAATTCATGCTGATTGCTCAGATGGAGGAAGATGCCCTTGTCTCGAAAGCGGGTTGTCGAAGATCTaGCAGAGGTCGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQIHADCSDGGRCPCLESGLSKI*QRSGCR
Trigger: CCTGCACCCCGACCTCTGGCAGATCTTCGACAACCC...GCTTTCGAGACAAGGGCATCTTCCTCCATCTGAGCAATCAGCATGAATTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR CCA 90 bp CAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGAGGCGGCTGCCACTCTaGACGAACTTCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGDIFSSGTRNMNSGSGERRLPL*TNFFSS
Trigger: GCTGCTGAAGAAGTTCGTCCAGAGTGGCAGCCGCCT...CTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCATGGCGCACGATTTGGTaGATGGTGGTGGCAAAACCG +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPWRTIW*MVVAKP
Trigger: CGGTTTTGCCACCACCATCCACCAAATCGTGCGCCA...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTTTCTCCCTCAGTCCTaGGTCCAGGTAGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNFLPQS*VQVEPC
Trigger: ACACGGCTCTACCTGGACCCAGGACTGAGGGAGAAA...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACGTTTGGCAGAGTGGTTaGGTGTCAGGGGTCGACAAA +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNVWQSG*VSGVDK
Trigger: TTTGTCGACCCCTGACACTCAACCACTCTGCCAAAC...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp ACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAACCCCACTGGCGCACGATTTaGTGGATGGTGGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TLIIYHAGSPQKPCAHEPHWRTI*WMVVAK
Trigger: TTTTGCCACCACCATCCACCAAATCGTGCGCCAGTG...GGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp TGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAGAGGGCCGTGTCTTaGGAGCAAGGTGACATATTC +
Preference number: 4 (lower is better)
Translates to: CGTLIIYHAGSPQKPCAHERAVS*EQGDIF
Trigger: GAATATGTCACCTTGCTCCCAAGACACGGCCCTCTC...GTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACGAGAGGGCCGTGTCTTaGGAGCAAGGTGACATATTC +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNERAVS*EQGDIF
Trigger: GAATATGTCACCTTGCTCCCAAGACACGGCCCTCTC...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACCGGCCAAATTCATGCTaGTTGCTCAGATGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNRPNSC*LLRWRK
Trigger: CTTCCTCCATCTGAGCAATCAGCATGAATTTGGCCG...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp CCGCAGGGTATCACCCCGGATCACATAGGCCTGGGAGATGTATGGTACATTCCATCAGATGGAGGAAGATaGCCTTGTCTCGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PQGITPDHIGLGDVWYIPSDGGR*PCLESS
Trigger: AGAGCTTTCGAGACAAGGGCATCTTCCTCCATCTGA...TGGAATGTACCATACATCTCCCAGGCCTATGTGATCCGGGGTGATACCCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCTCAGATGGAGGAAGATaGCCTTGTCTCGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGSDGGR*PCLESS
Trigger: AGAGCTTTCGAGACAAGGGCATCTTCCTCCATCTGA...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp AGCCCCGTTGAGGTTCTGAAAGATCCGAGACTTATGATCCAGATTAAGGCTGAGAGGCGGCTGCCACTCTaGACGAACTTCTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPVEVLKDPRLMIQIKAERRLPL*TNFFSS
Trigger: GCTGCTGAAGAAGTTCGTCCAGAGTGGCAGCCGCCT...CTCAGCCTTAATCTGGATCATAAGTCTCGGATCTTTCAGAACCTCAACGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACAGCGATGTGGGGTTCATaGAAGACCTCGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETAMWGS*KTSLLC
Trigger: GCACAACAACGAGGTCTTCCATGAACCCCACATCGC...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp GACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCCTAAAAAGGCACAATaGCAGGGCAGGTTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DCGTLIIYHAGSPQKPCAPKKAQ*QGRFGR
Trigger: TCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGG...GGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp GACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCATGAACTCAGGAAGTaGGGAGACAGAGAGACCCAT +
Preference number: 4 (lower is better)
Translates to: DCGTLIIYHAGSPQKPCAHELRK*GDRETH
Trigger: ATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATG...GGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCCCTCGTGGTAGTGGGTaGGGCGGCCGGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRPRGSG*GGRGAG
Trigger: TCCTGCACCCCGGCCGCCTCACCCACTACCACGAGG...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp TTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAACAGGCACGCGGAACATaGACTCAGGAAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FRVRLRNINNLSRGESPEQARGT*TQEVGR
Trigger: TCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTG...TTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACAGTCTTGGGAGCAAGGTaGCATATTCAGTTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETVLGAR*HIQFRH
Trigger: GTGCCTGAACTGAATATGTCACCTTGCTCCCAAGAC...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp CAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGAAGACCTCGTTGTTGTaGAGGAAAAGGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: QGDIFSSGTRNMNSGSGEKTSLL*RKRVTL
Trigger: CAGGGTCACCCTTTTCCTGCACAACAACGAGGTCTT...CTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR GCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGTGAGGCGGCCGGGGTaGAGGAGTGCCCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRVRRPG*RSAQPF
Trigger: GAAGGGCTGGGCACTCCTGCACCCCGGCCGCCTCAC...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp CGCACACGGTTCCGATCAAACTTTAAAACCACTTCATCTAAAGCCCCGTTGAGGTTTCTCCCTCAGTCCTaGGTCCAGGTAGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RTRFRSNFKTTSSKAPLRFLPQS*VQVEPC
Trigger: ACACGGCTCTACCTGGACCCAGGACTGAGGGAGAAA...CCTCAACGGGGCTTTAGATGAAGTGGTTTTAAAGTTTGATCGGAACCGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp TGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGTGTGCCCCAGGTCGTTaGCAGCCCCTCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CPLFRVRLRNINNLSRGECAPGR*QPLVVV
Trigger: CACTACCACGAGGGGCTGCCAACGACCTGGGGCACA...CTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp TGTCGTAGGCCACGTTCCGGATACGCACACGGTTCCGATCAAACTTTAAAACCACATCTAAAGCCCCGTTaGGGTTCTGAAAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: CRRPRSGYAHGSDQTLKPHLKPR*GSERSE
Trigger: CTCGGATCTTTCAGAACCTCAACGGGGCTTTAGATG...TGGTTTTAAAGTTTGATCGGAACCGTGTGCGTATCCGGAACGTGGCCTACGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp TTCCGGATACGCACACGGTTCCGATCAAACTTTAAAACCACTTCATCTAAAGCCTCTTCAGCAGCTCTGTaGGGCTGCCGGCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: FRIRTRFRSNFKTTSSKASSAAL*GCRPES
Trigger: TGATTCTGGCCGGCAGCCCCACAGAGCTGCTGAAGA...GGCTTTAGATGAAGTGGTTTTAAAGTTTGATCGGAACCGTGTGCGTATCCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CCA 90 bp TGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGGAGAACACATCCCTCTaGGGCAGCTCCATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: CPLFRVRLRNINNLSRGEENTSL*GSSIRR
Trigger: CCTGCGGATGGAGCTGCCCCAGAGGGATGTGTTCTC...CTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp GACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCAAGATCCGAGACTTATaGTCCAGATTAAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: DCGTLIIYHAGSPQKPCAKIRDL*SRLRLS
Trigger: ACTCAGCCTTAATCTGGATCATAAGTCTCGGATCTT...GGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp TGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGCACGAGCTTCACAGCTaGGAAGTGGTCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CPLFRVRLRNINNLSRGEHELHS*EVVLEL
Trigger: CAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTG...CTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR TCA 90 bp TGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGCAGGCACGCGGAACATaGACTCAGGAAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CPLFRVRLRNINNLSRGEQARGT*TQEVGR
Trigger: TCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTG...CTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR GCA 90 bp AGATGGAGGAAGATGCCCTTGTCTCGAAAGCTCTTACAGAAGGCCATGTCCGGGCAAATTCATGCTGATTaGTCAGATGGAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: RWRKMPLSRKLLQKAMSGQIHAD*SDGGRC
Trigger: GCATCTTCCTCCATCTGAGCAATCAGCATGAATTTG...CCCGGACATGGCCTTCTGTAAGAGCTTTCGAGACAAGGGCATCTTCCTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR GCA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACAAATTCATGCTGATTaGTCAGATGGAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LRNINNLSRGESPEALCPQIHAD*SDGGRC
Trigger: GCATCTTCCTCCATCTGAGCAATCAGCATGAATTTG...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp ATACGCACACGGTTCCGATCAAACTTTAAAACCACTTCATCTAAAGCCCCGTTGTTCCATGGACCACAATaGGGAGCGTGTCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: IRTRFRSNFKTTSSKAPLFHGPQ*GACRRP
Trigger: TGGCCTACGACACGCTCCCCATTGTGGTCCATGGAA...CAACGGGGCTTTAGATGAAGTGGTTTTAAAGTTTGATCGGAACCGTGTGCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR TCA 90 bp TGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGTCCTTTATTCAGAGTaGGACTGCGGAACATTAATA +
Preference number: 4 (lower is better)
Translates to: CGTLIIYHAGSPQKPCAHVLYSE*DCGTLI
Trigger: TATTAATGTTCCGCAGTCTCACTCTGAATAAAGGAC...GTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCCACCAGCAGCTTCTCTaGGTTGACCGGGTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRHQQLL*VDRVSA
Trigger: GGCCGAGACCCGGTCAACCCAGAGAAGCTGCTGGTG...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGCTCCGTGTCGTATCTaGAAGTGGCCAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRAPCRI*KWPGAG
Trigger: GCCGGCTCCTGGCCACTTCCAGATACGACACGGAGC...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCTGTGCCCCAGGTCGTTaGCAGCCCCTCGTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRCAPGR*QPLVVV
Trigger: CACTACCACGAGGGGCTGCCAACGACCTGGGGCACA...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp AGACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCGTCCTTTATTCAGAGTaGGACTGCGGAACATTAATA +
Preference number: 4 (lower is better)
Translates to: RLRNINNLSRGESPEALCVLYSE*DCGTLI
Trigger: TATTAATGTTCCGCAGTCTCACTCTGAATAAAGGAC...GCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp TGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGTGTCGTATCTGGAAGTaGCCAGGAGCCGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: CPLFRVRLRNINNLSRGECRIWK*PGAGQI
Trigger: AATTTGGCCGGCTCCTGGCCACTTCCAGATACGACA...CTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp TGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCTTGTACTTCCACTaGCGCACGATTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: CPLFRVRLRNINNLSRGESLYFH*RTIWWM
Trigger: CATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGA...CTCCCCGCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCAGTGTCCTCCGGTCCTaGTTGCAGAAGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRSVLRS*LQKPQP
Trigger: AGGCTGTGGCTTCTGCAACCAGGACCGGAGGACACT...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCAGACGGCTGCTCGTCTaGCCGGTAGCGAACCACAAA +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRRRLLV*PVANHK
Trigger: TTTGTGGTTCGCTACCGGCCAGACGAGCAGCCGTCT...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR TCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGTTTGGCAGAGTGGTTaGGTGTCAGGGGTCGACAAA +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRVWQSG*VSGVDK
Trigger: TTTGTCGACCCCTGACACTCAACCACTCTGCCAAAC...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CCA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCCATGAACTCAGGAAGTaGGGAGACAGAGAGACCCAT +
Preference number: 4 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRHELRK*GDRETH
Trigger: ATGGGTCTCTCTGTCTCCCCACTTCCTGAGTTCATG...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS TCA 90 bp GGGGCGGCGGCTCGGGCCGGCGGGCGGGAGACAGGGACTCTGGGCTaGGCCAGCCGCTTGACACATGTGGAAGCTGAAACCTGGACAGGG +
Preference number: 5 (lower is better)
Translates to: GAAARAGGRETGTLG*ASRLTHVEAETWTG
Trigger: CCCTGTCCAGGTTTCAGCTTCCACATGTGTCAAGCGGCTGGCTCAGCCCAGAGTCCCTGTCTCCCGCCCGCCGGCCCGAGCCGCCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS CCA 90 bp CGGGCCCAGACAGCACCCAGGATCCTGGGATCTCCGCTACGCGCCTaGATCCCAGCTCCGGAGGGGAGCTCTGGAAAGGGGGCGCTCGGG +
Preference number: 5 (lower is better)
Translates to: RAQTAPRILGSPLRA*IPAPEGSSGKGALG
Trigger: CCCGAGCGCCCCCTTTCCAGAGCTCCCCTCCGGAGCTGGGATCCAGGCGCGTAGCGGAGATCCCAGGATCCTGGGTGCTGTCTGGGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000456079.1
CDS CCA 90 bp GAGGAGGTCATGGTGGGGAGCGGGCCCAGACAGCACCCAGGATCCTaGGATCTCCGCTACGCGCCTGGATCCCAGCTCCGGAGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: EEVMVGSGPRQHPGS*DLRYAPGSQLRRGA
Trigger: AGCTCCCCTCCGGAGCTGGGATCCAGGCGCGTAGCGGAGATCCCAGGATCCTGGGTGCTGTCTGGGCCCGCTCCCCACCATGACCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000456079.1
CDS TCA 90 bp CTCGCCTGGGCTCAGAGCCTCCTCCGGCCCCACGAGCTTCACAGCTaGGAAGTGGTCCTGGAGCTGCGGCCAGGAGTCAGCGATGTGGGG +
Preference number: 5 (lower is better)
Translates to: LAWAQSLLRPHELHS*EVVLELRPGVSDVG
Trigger: CCCCACATCGCTGACTCCTGGCCGCAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTGGGGCCGGAGGAGGCTCTGAGCCCAGGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000460475.1
ENST00000478082.5
CDS CCA 90 bp GTGAGAGGCGAGCTGAGACGGCGGCAGGTGGGGAGGCGGTGTGGATaGGGTAACTGGCCCATGCCCCCAGGAGAAGAGGAGGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VRGELRRRQVGRRCG*GNWPMPPGEEEGGS
Trigger: ACTGCCTCCCTCCTCTTCTCCTGGGGGCATGGGCCAGTTACCCCATCCACACCGCCTCCCCACCTGCCGCCGTCTCAGCTCGCCTCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460475.1
CDS GCA 90 bp TCCGCCGCGGGACGGAGGCCTGGGGGAACTGGGAGTTCAGCTTTCTaGAGAGGGCCACTAGGAACCTCGGATTGCCCACGGAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: SAAGRRPGGTGSSAF*RGPLGTSDCPRKPA
Trigger: GGCTGGCTTCCGTGGGCAATCCGAGGTTCCTAGTGGCCCTCTGCAGAAAGCTGAACTCCCAGTTCCCCCAGGCCTCCGTCCCGCGGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS CCA 90 bp CCGCCCGCGCCTTGGTGTGGTAACCGGGAAACAGGCTCTCGGTCATaGGGCCCACATACGTCCGCAGCAGCTGCAGCCACTGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: PPAPWCGNRETGSRS*GPHTSAAAAATGPR
Trigger: ACGAGGACCAGTGGCTGCAGCTGCTGCGGACGTATGTGGGCCCCATGACCGAGAGCCTGTTTCCCGGTTACCACACCAAGGCGCGGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp AGAGGCGGGGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGGTGTGCCCCAGGTCGTaGGCAGCCCCTCGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: RGGDSGSFLRGPCLGSKVVCPRS*AAPRGS
Trigger: ACTACCACGAGGGGCTGCCAACGACCTGGGGCACAC...CACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCCCCGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS TCA 90 bp GACAGGGACTCTGGGCTGAGCCAGCCGCTTGACACATGTGGAAGCTaGAACCTGGACAGGGGAAGTGACCCCTGGCGGAGGGTCGGGCGG +
Preference number: 5 (lower is better)
Translates to: DRDSGLSQPLDTCGS*NLDRGSDPWRRVGR
Trigger: CCGCCCGACCCTCCGCCAGGGGTCACTTCCCCTGTCCAGGTTTCAGCTTCCACATGTGTCAAGCGGCTGGCTCAGCCCAGAGTCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS CCA 90 bp GGGCTCAGAGCCTCCTCCGGCCCCACGAGCTTCACAGCTGAGAAGTaGTCCTGGAGCTGCGGCCAGGAGTCAGCGATGTGGGGTTCATGG +
Preference number: 5 (lower is better)
Translates to: GLRASSGPTSFTAEK*SWSCGQESAMWGSW
Trigger: CCATGAACCCCACATCGCTGACTCCTGGCCGCAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTGGGGCCGGAGGAGGCTCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000460475.1
ENST00000478082.5
CDS CCA 90 bp GACAGGGAGGGAGGAAGCCTAGGAGTCCGCCGCGGGACGGAGGCCTaGGGGAACTGGGAGTTCAGCTTTCTGCAGAGGGCCACTAGGAAC +
Preference number: 5 (lower is better)
Translates to: DREGGSLGVRRGTEA*GNWEFSFLQRATRN
Trigger: GTTCCTAGTGGCCCTCTGCAGAAAGCTGAACTCCCAGTTCCCCCAGGCCTCCGTCCCGCGGCGGACTCCTAGGCTTCCTCCCTCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS-3UTR CAA 90 bp AAGCCCTGTGCCCACGAACCCCTGTGGGCGGAGGAGAGAGGCGGGGACTCCGGGTGGTTGAGGGCAACGTaGAGGGTGAAGGTGGATGAG +
Preference number: 5 (lower is better)
Translates to: KPCAHEPLWAEERGGDSGWLRAT*RVKVDE
Trigger: CTCATCCACCTTCACCCTCAACGTTGCCCTCAACCA...CCCGGAGTCCCCGCCTCTCTCCTCCGCCCACAGGGGTTCGTGGGCACAGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS GCA 90 bp CCCACTCGGGCCAGCAGAAGCTCTCTGCAGAGAAGAGCAGGCGGCTaGCACTCTGGACGAACTTCTTCAGCAGCTCTGTGGGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: PTRASRSSLQRRAGG*HSGRTSSAALWGCR
Trigger: CCGGCAGCCCCACAGAGCTGCTGAAGAAGTTCGTCCAGAGTGGCAGCCGCCTGCTCTTCTCTGCAGAGAGCTTCTGCTGGCCCGAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223127.8
ENST00000414785.5
ENST00000424135.5
ENST00000478082.5
ENST00000489927.1
CDS CCA 90 bp CTCTCGGTCATGGGGCCCACATACGTCCGCAGCAGCTGCAGCCACTaGTCCTCGTACCCCACCTGCTTCATGTGGATGTCCACGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LSVMGPTYVRSSCSH*SSYPTCFMWMSTVG
Trigger: GCCCACCGTGGACATCCACATGAAGCAGGTGGGGTACGAGGACCAGTGGCTGCAGCTGCTGCGGACGTATGTGGGCCCCATGACCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS GCA 90 bp TCCTCCGGCCCCACGAGCTTCACAGCTGAGAAGTGGTCCTGGAGCTaGGGCCAGGAGTCAGCGATGTGGGGTTCATGGAAGACCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSGPTSFTAEKWSWS*GQESAMWGSWKTSC
Trigger: GCAGGAGGTCTTCCATGAACCCCACATCGCTGACTCCTGGCCGCAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTGGGGCCGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421736.1
ENST00000460475.1
CDS GCA 90 bp TCCTCCGGCCCCACGAGCTTCACAGCTGAGAAGTGGTCCTGGAGCTaGGGCCAGGAGTCAGCGATGTGGGGTTCATGGAAGACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SSGPTSFTAEKWSWS*GQESAMWGSWKTSL
Trigger: CAACGAGGTCTTCCATGAACCCCACATCGCTGACTCCTGGCCGCAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTGGGGCCGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000478082.5
CDS GCA 90 bp GGAAACAGGCTCTCGGTCATGGGGCCCACATACGTCCGCAGCAGCTaGAGCCACTGGTCCTCGTACCCCACCTGCTTCATGTGGATGTCC +
Preference number: 5 (lower is better)
Translates to: GNRLSVMGPTYVRSS*SHWSSYPTCFMWMS
Trigger: GGACATCCACATGAAGCAGGTGGGGTACGAGGACCAGTGGCTGCAGCTGCTGCGGACGTATGTGGGCCCCATGACCGAGAGCCTGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS CCA 90 bp GGCCAGCAGAAGCTCTCTGCAGAGAAGAGCAGGCGGCTGCCACTCTaGACGAACTTCTTCAGCAGCTCTGTGGGGCTGCCGGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: GQQKLSAEKSRRLPL*TNFFSSSVGLPARI
Trigger: GATTCTGGCCGGCAGCCCCACAGAGCTGCTGAAGAAGTTCGTCCAGAGTGGCAGCCGCCTGCTCTTCTCTGCAGAGAGCTTCTGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223127.8
ENST00000414785.5
ENST00000424135.5
ENST00000478082.5
ENST00000489927.1
CDS TCA 90 bp GCCACTAGGAACCTCGGATTGCCCACGGAAGCCAGCCACTTTCTTTaGCAGTCCAGCCCACCTCCTCTTCTGCCCGGAGAAGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: ATRNLGLPTEASHFL*QSSPPPLLPGEAPG
Trigger: CCCTGGAGCTTCTCCGGGCAGAAGAGGAGGTGGGCTGGACTGTCAAAGAAAGTGGCTGGCTTCCGTGGGCAATCCGAGGTTCCTAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS GCA 90 bp CTCACGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTaGTCCGTGTCGTATCTGGAAGTGGCCAGGAGCCGGCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: LTTGLSKICQRSGCR*SVSYLEVARSRPNS
Trigger: TGAATTTGGCCGGCTCCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487563.1
CDS CCA 90 bp CATCCGCAGGGTATCACCCCGGATCACATAGGCCTGGGAGATGTATaGTACATTCCACACACCCCTGGAGGCACCGACACCGCGGTCAGC +
Preference number: 5 (lower is better)
Translates to: HPQGITPDHIGLGDV*YIPHTPGGTDTAVS
Trigger: GCTGACCGCGGTGTCGGTGCCTCCAGGGGTGTGTGGAATGTACCATACATCTCCCAGGCCTATGTGATCCGGGGTGATACCCTGCGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466881.1
CDS CCA 90 bp CACCAGGGCTATCCTGGAGTGTGGCTCGTTGTGGGCAGGAACCTTTaGGTTCTGACCAGGCTGCTGGCCCAGAGAGCTCCACTGCCTACT +
Preference number: 5 (lower is better)
Translates to: HQGYPGVWLVVGRNL*VLTRLLAQRAPLPT
Trigger: AGTAGGCAGTGGAGCTCTCTGGGCCAGCAGCCTGGTCAGAACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATAGCCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS-3UTR CAA 90 bp TCCTTCCAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTGCTTCCAGTCGACGGGGTaGTCGAAGATCTGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SFQSTGLSKICQRSGCRCFQSTG*SKICQR
Trigger: CCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAA...GCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS-3UTR CAA 90 bp CCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTAGCCTCCAGCCAGCCTaGAATCCTCATGCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: PGPLKRHNGRAGLAEWLSSLQPA*NPHAGR
Trigger: GCGGCCGGCATGAGGATTCAAGGCTGGCTGGAGGCT...ACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp CCAGGCCCCCTAAAAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTGAGTGTGTGCCCCAGGTCGTaGGCAGCCCCTCGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: PGPLKRHNGRAGLAEWLSVCPRS*AAPRGS
Trigger: ACTACCACGAGGGGCTGCCAACGACCTGGGGCACAC...ACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTTTTAGGGGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CAA 90 bp GACTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCAGACAAGGCGAGGATaGTCCCGGGCGCACGGGAGG +
Preference number: 5 (lower is better)
Translates to: DCGTLIIYHAGSPQKPCAQTRRG*SRAHGR
Trigger: CCTCCCGTGCGCCCGGGACAATCCTCGCCTTGTCTG...GGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp GCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACAGCAGCTTCTCTGGGTaGACCGGGTCTCGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: AVSWEQGDIFSSGTRNMNSSFSG*TGSRPR
Trigger: CCGGGGCCGAGACCCGGTCAACCCAGAGAAGCTGCT...GTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp AGTGGGACCGTTTCCATGGACCACAATGGGGAGCGTGTCGTAGGCCACGTTCCGTCGTCGTCATCATCCTaGTACTTCCACTGGCGCACG +
Preference number: 5 (lower is better)
Translates to: SGTVSMDHNGERVVGHVPSSSSS*YFHWRT
Trigger: CGTGCGCCAGTGGAAGTACAAGGATGATGACGACGA...CGGAACGTGGCCTACGACACGCTCCCCATTGTGGTCCATGGAAACGGTCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS GCA 90 bp ACTGGGAGTTCAGCTTTCTGCAGAGGGCCACTAGGAACCTCGGATTaGCCACGGAAGCCAGCCACTTTCTTTGACAGTCCAGCCCACCTC +
Preference number: 5 (lower is better)
Translates to: TGSSAFCRGPLGTSD*PRKPATFFDSPAHL
Trigger: GAGGTGGGCTGGACTGTCAAAGAAAGTGGCTGGCTTCCGTGGGCAATCCGAGGTTCCTAGTGGCCCTCTGCAGAAAGCTGAACTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS-3UTR CAA 90 bp CTTCCAGTCGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTGCAGGTGCTCTGGAGGAAGATGCCCTaGTCTCGAAAGCTCTTACAG +
Preference number: 5 (lower is better)
Translates to: LPVDGVVEDLPEVGVQVLWRKMP*SRKLLQ
Trigger: CTGTAAGAGCTTTCGAGACAAGGGCATCTTCCTCCA...GAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440925.1
CDS CCA 90 bp GGGGTCCCAAATTCTCCAGGGAATAAAGGGACACCAGGGCTATCCTaGAGTGTGGCTCGTTGTGGGCAGGAACCTTTGGGTTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: GVPNSPGNKGTPGLS*SVARCGQEPLGSDQ
Trigger: CTGGTCAGAACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATAGCCCTGGTGTCCCTTTATTCCCTGGAGAATTTGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS-3UTR CAA 90 bp GAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCAGTTCAGGCCCACTGGCGCACGATTaGGTGGATGGTGGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: ELPERAVSWEQGDIFSSGPLAHD*VDGGGK
Trigger: TTTGCCACCACCATCCACCAAATCGTGCGCCAGTGG...GCCTGAACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS CCA 90 bp CAAATTCTCCAGGGAATAAAGGGACACCAGGGCTATCCTGGAGTGTaGCTCGTTGTGGGCAGGAACCTTTGGGTTCTGACCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QILQGIKGHQGYPGV*LVVGRNLWVLTRLL
Trigger: CAGCAGCCTGGTCAGAACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATAGCCCTGGTGTCCCTTTATTCCCTGGAGAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS-3UTR CAA 90 bp GGACTCCGGGAGCTTCCTGAGAGGGCCGTGTCTTGGGAGCAAGGTGACATATTCTGGAGGAAGATGCCCTaGTCTCGAAAGCTCTTACAG +
Preference number: 5 (lower is better)
Translates to: GLRELPERAVSWEQGDIFWRKMP*SRKLLQ
Trigger: CTGTAAGAGCTTTCGAGACAAGGGCATCTTCCTCCA...GAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCCGGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CAA 90 bp TGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACTTCCAGTCGACGGGGTaGTCGAAGATCTGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: CGTLIIYHAGSPQKPCAHFQSTG*SKICQR
Trigger: CCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAA...GTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS CCA 90 bp TGGTCGTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTTGGTaGATGGTGGTGGCAAAACCGATGAATCCTCAGGGTACTGCTCCG +
Preference number: 5 (lower is better)
Translates to: WSSSSSLYFHWRTIW*MVVAKPMNPQGTAP
Trigger: CGGAGCAGTACCCTGAGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGACGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CAA 90 bp ACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCACGAACCCGGTTTGGCAGAGTGGTaGAGTGTCAGGGGTCGACAA +
Preference number: 5 (lower is better)
Translates to: TLIIYHAGSPQKPCAHEPGLAEW*SVRGRQ
Trigger: TTGTCGACCCCTGACACTCAACCACTCTGCCAAACC...GGGTTCGTGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS CCA 90 bp AGCTGGTCGTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTTaGTGGATGGTGGTGGCAAAACCGATGAATCCTCAGGGTACTGCT +
Preference number: 5 (lower is better)
Translates to: SWSSSSSLYFHWRTI*WMVVAKPMNPQGTA
Trigger: AGCAGTACCCTGAGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGACGACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CAA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACATCGTCGTCATCATCCTaGTACTTCCACTGGCGCACG +
Preference number: 5 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETSSSSS*YFHWRT
Trigger: CGTGCGCCAGTGGAAGTACAAGGATGATGACGACGA...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCATGGAAGACCTCGTTGTaGTGCAGGAAAAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: LRNINNLSRGESPEALCPWKTSL*CRKRVT
Trigger: GGTCACCCTTTTCCTGCACAACAACGAGGTCTTCCA...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp GGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGACATGGTTGAGGGCAACGTaGAGGGTGAAGGTGGATGAG +
Preference number: 5 (lower is better)
Translates to: GDIFSSGTRNMNSGSGETWLRAT*RVKVDE
Trigger: CTCATCCACCTTCACCCTCAACGTTGCCCTCAACCA...TGTCTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS CCA 90 bp AGCTGGTCGTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTTaGTGGATGGTGGTGGCAAAACCGATGAATCCACCAGAATTGAGG +
Preference number: 5 (lower is better)
Translates to: SWSSSSSLYFHWRTI*WMVVAKPMNPPELR
Trigger: CCTCAATTCTGGTGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGACGACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223127.8
ENST00000478082.5
ENST00000489927.1
CDS-3UTR CAA 90 bp CAAGGTGACATATTCAGTTCAGGCACGCGGAACATGAACTCAGGAAGTGGGGAGATGAATCCACCAGAATaGAGGAAGCGCTTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: QGDIFSSGTRNMNSGSGEMNPPE*RKRFPV
Trigger: CACGGGGAAGCGCTTCCTCAATTCTGGTGGATTCAT...CTCCCCACTTCCTGAGTTCATGTTCCGCGTGCCTGAACTGAATATGTCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp CGCACACGGTTCCGATCAAACTTTAAAACCACTTCATCTAAAGCCCCGTTGAGGCCACTGGCGCACGATTaGGTGGATGGTGGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: RTRFRSNFKTTSSKAPLRPLAHD*VDGGGK
Trigger: TTTGCCACCACCATCCACCAAATCGTGCGCCAGTGG...CCTCAACGGGGCTTTAGATGAAGTGGTTTTAAAGTTTGATCGGAACCGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS-3UTR CAA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCATCATGGAAGACCTCGTaGTTGTGCAGGAAAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LRNINNLSRGESPEALCPSWKTS*LCRKRV
Trigger: CACCCTTTTCCTGCACAACAACGAGGTCTTCCATGA...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS-3UTR CAA 90 bp CTGCGGAACATTAATAATTTATCACGCGGGGAGTCCCCAGAAGCCCTGTGCCCATGGAGGAAGATGCCCTaGTCTCGAAAGCTCTTACAG +
Preference number: 5 (lower is better)
Translates to: LRNINNLSRGESPEALCPWRKMP*SRKLLQ
Trigger: CTGTAAGAGCTTTCGAGACAAGGGCATCTTCCTCCA...TGGGCACAGGGCTTCTGGGGACTCCCCGCGTGATAAATTATTAATGTTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS CCA 90 bp TGGTCGTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTTGGTaGATGGTGGTGGCAAAACCGATGAATCCACCAGAATTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: WSSSSSLYFHWRTIW*MVVAKPMNPPELRK
Trigger: CTTCCTCAATTCTGGTGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGACGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223127.8
ENST00000478082.5
ENST00000489927.1
CDS GCA 90 bp AACACCAGTATACCCAATATACAGGAGAAGAGGCTGTCTGATCAATaGTGGCTTTGGGGGCAAGAGTCCTTTCTGTTCGGCCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: NTSIPNIQEKRLSDQ*WLWGQESFLFGLCL
Trigger: AAGGCAGAGGCCGAACAGAAAGGACTCTTGCCCCCAAAGCCAGCATTGATCAGACAGCCTCTTCTCCTGTATATTGGGTATACTGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460132.5
CDS CCA 90 bp ACCAGTATACCCAATATACAGGAGAAGAGGCTGTCTGATCAATGCTaGCTTTGGGGGCAAGAGTCCTTTCTGTTCGGCCTCTGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: TSIPNIQEKRLSDQC*LWGQESFLFGLCLH
Trigger: ATGAAGGCAGAGGCCGAACAGAAAGGACTCTTGCCCCCAAAGCCAGCATTGATCAGACAGCCTCTTCTCCTGTATATTGGGTATACTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460132.5
CDS TCA 90 bp GCTTCTCTCCTCTTCTGCCCGGAGAAGCTCCAGGGGCTGCCTTTGTaGTCACAGCATCTTCACAAGGACCAAAGGAAAATAAGATTTCTT +
Preference number: 5 (lower is better)
Translates to: ASLLFCPEKLQGLPL*SQHLHKDQRKIRFL
Trigger: AAGAAATCTTATTTTCCTTTGGTCCTTGTGAAGATGCTGTGATCACAAAGGCAGCCCCTGGAGCTTCTCCGGGCAGAAGAGGAGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414785.5
ENST00000478082.5
CDS-3UTR CAA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCTTCCAGTCGACGGGGTaGTCGAAGATCTGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRFQSTG*SKICQR
Trigger: CCTCTGGCAGATCTTCGACAACCCCGTCGACTGGAA...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS-3UTR CAA 90 bp ACAAACTGTCCTTTATTCAGAGTGAGACTGCGGAACATTAATAATTTATCACGCGGTTTGGCAGAGTGGTaGAGTGTCAGGGGTCGACAA +
Preference number: 5 (lower is better)
Translates to: TNCPLFRVRLRNINNLSRGLAEW*SVRGRQ
Trigger: TTGTCGACCCCTGACACTCAACCACTCTGCCAAACC...GCGTGATAAATTATTAATGTTCCGCAGTCTCACTCTGAATAAAGGACAGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS GCA 72 bp CGGGCGGGACGCGGGGGCGGGTCCTGGCCGCAGCCCTaGCCAGAGAGTGCGGGCGGAAGACGGGGAGAGCGA +
Preference number: 6 (lower is better)
Translates to: RAGRGGGSWPQP*PESAGGRRGER
Trigger: TCGCTCTCCCCGTCTTCCGCCCGCACTCTCTGGGCAGGGCTGCGGCCAGGACCCGCCCCCGCGTCCCGCCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS CCA 72 bp GCTCGGGCTGCTGTGCGGCCGCCGCGGGGAGCAGCTTaGCTGGGGCTACGCCCTCCTCTTCTGCCCGGAGAA +
Preference number: 6 (lower is better)
Translates to: ARAAVRPPRGAA*LGLRPPLLPGE
Trigger: TTCTCCGGGCAGAAGAGGAGGGCGTAGCCCCAGCCAAGCTGCTCCCCGCGGCGGCCGCACAGCAGCCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456079.1
CDS CCA 72 bp ATGGTGGGGAGCGGGCCCAGACAGCACCCAGGATCCTaGGATCTCCGCTACGCGCCTGGATCCCAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: MVGSGPRQHPGS*DLRYAPGSQLR
Trigger: CCGGAGCTGGGATCCAGGCGCGTAGCGGAGATCCCAGGATCCTGGGTGCTGTCTGGGCCCGCTCCCCACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000456079.1
CDS TCA 72 bp GCTCGGGCCGGCGGGCGGGAGACAGGGACTCTGGGCTaGGCCAGCCGCTTGACACATGTGGAAGCTGAAACC +
Preference number: 6 (lower is better)
Translates to: ARAGGRETGTLG*ASRLTHVEAET
Trigger: GGTTTCAGCTTCCACATGTGTCAAGCGGCTGGCTCAGCCCAGAGTCCCTGTCTCCCGCCCGCCGGCCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS CCA 72 bp GAGCTGAGACGGCGGCAGGTGGGGAGGCGGTGTGGATaGGGTAACTGGCCCATGCCCCCAGGAGAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: ELRRRQVGRRCG*GNWPMPPGEEE
Trigger: CTCCTCTTCTCCTGGGGGCATGGGCCAGTTACCCCATCCACACCGCCTCCCCACCTGCCGCCGTCTCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460475.1
CDS CCA 72 bp GGAGGAAGCCTAGGAGTCCGCCGCGGGACGGAGGCCTaGGGGAACTGGGAGTTCAGCTTTCTGCAGAGGGCC +
Preference number: 6 (lower is better)
Translates to: GGSLGVRRGTEA*GNWEFSFLQRA
Trigger: GGCCCTCTGCAGAAAGCTGAACTCCCAGTTCCCCCAGGCCTCCGTCCCGCGGCGGACTCCTAGGCTTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS TCA 72 bp GCTCAGAGCCTCCTCCGGCCCCACGAGCTTCACAGCTaGGAAGTGGTCCTGGAGCTGCGGCCAGGAGTCAGC +
Preference number: 6 (lower is better)
Translates to: AQSLLRPHELHS*EVVLELRPGVS
Trigger: GCTGACTCCTGGCCGCAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTGGGGCCGGAGGAGGCTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000460475.1
ENST00000478082.5
CDS CCA 72 bp ACAGCACCCAGGATCCTGGGATCTCCGCTACGCGCCTaGATCCCAGCTCCGGAGGGGAGCTCTGGAAAGGGG +
Preference number: 6 (lower is better)
Translates to: TAPRILGSPLRA*IPAPEGSSGKG
Trigger: CCCCTTTCCAGAGCTCCCCTCCGGAGCTGGGATCCAGGCGCGTAGCGGAGATCCCAGGATCCTGGGTGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000456079.1
CDS CCA 72 bp GCCTCCTCCGGCCCCACGAGCTTCACAGCTGAGAAGTaGTCCTGGAGCTGCGGCCAGGAGTCAGCGATGTGG +
Preference number: 6 (lower is better)
Translates to: ASSGPTSFTAEK*SWSCGQESAMW
Trigger: CCACATCGCTGACTCCTGGCCGCAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTGGGGCCGGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000460475.1
ENST00000478082.5
CDS CCA 72 bp AAAGGACACCATGATGTAGCGTGTGCCCCAGGTCGTTaGCAGCCCCTCGTGGTAGTGGGTGAGGCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: KGHHDVACAPGR*QPLVVVGEAAG
Trigger: CCCGGCCGCCTCACCCACTACCACGAGGGGCTGCCAACGACCTGGGGCACACGCTACATCATGGTGTCCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS GCA 72 bp CTCTCGGTCATGGGGCCCACATACGTCCGCAGCAGCTaGAGCCACTGGTCCTCGTACCCCACCTGCTTCATG +
Preference number: 6 (lower is better)
Translates to: LSVMGPTYVRSS*SHWSSYPTCFM
Trigger: CATGAAGCAGGTGGGGTACGAGGACCAGTGGCTGCAGCTGCTGCGGACGTATGTGGGCCCCATGACCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS GCA 72 bp GGACGGAGGCCTGGGGGAACTGGGAGTTCAGCTTTCTaGAGAGGGCCACTAGGAACCTCGGATTGCCCACGG +
Preference number: 6 (lower is better)
Translates to: GRRPGGTGSSAF*RGPLGTSDCPR
Trigger: CCGTGGGCAATCCGAGGTTCCTAGTGGCCCTCTGCAGAAAGCTGAACTCCCAGTTCCCCCAGGCCTCCGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481461.1
CDS CCA 72 bp CCAGGGGACCGCCCCCTCCCACTCAGTGTCCTGCGCTaGCAGCAGCCATCACGTTTGGTGTCTTCCTTAGCA +
Preference number: 6 (lower is better)
Translates to: PGDRPLPLSVLR*QQPSRLVSSLA
Trigger: TGCTAAGGAAGACACCAAACGTGATGGCTGCTGCCAGCGCAGGACACTGAGTGGGAGGGGGCGGTCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487563.1
CDS TCA 72 bp AGCCACTGCAGCCAGCCTCATGGCACCTCTGACTGGTaGCCACTCCAAACCCCTGAGAGTAGGGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: SHCSQPHGTSDW*PLQTPESRGLG
Trigger: CCCAAGCCCCCTACTCTCAGGGGTTTGGAGTGGTCACCAGTCAGAGGTGCCATGAGGCTGGCTGCAGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463479.1
CDS GCA 72 bp ACGACGGGGTTGTCGAAGATCTGCCAGAGGTCGGGGTaGAGGTGCTCCGTGTCGTATCTGGAAGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TTGLSKICQRSG*RCSVSYLEVAR
Trigger: CCTGGCCACTTCCAGATACGACACGGAGCACCTGCACCCCGACCTCTGGCAGATCTTCGACAACCCCGTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487563.1
CDS CCA 72 bp ATGGGGCCCACATACGTCCGCAGCAGCTGCAGCCACTaGTCCTCGTACCCCACCTGCTTCATGTGGATGTCC +
Preference number: 6 (lower is better)
Translates to: MGPTYVRSSCSH*SSYPTCFMWMS
Trigger: GGACATCCACATGAAGCAGGTGGGGTACGAGGACCAGTGGCTGCAGCTGCTGCGGACGTATGTGGGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223127.8
CDS CCA 72 bp AGGCCTGGGAGATGTATGGTACATTCCACACACCCCTaGAGGCACCGACACCGCGGTCAGCTGGGAGGACAG +
Preference number: 6 (lower is better)
Translates to: RPGRCMVHSTHP*RHRHRGQLGGQ
Trigger: CTGTCCTCCCAGCTGACCGCGGTGTCGGTGCCTCCAGGGGTGTGTGGAATGTACCATACATCTCCCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466881.1
CDS CAA 90 bp ACACCAGGGCTATCCTGGAGTGTGGCTCGTTGTGGGCAGGAACCTTaGGGTTCTGACCAGGCTGCTGGCCCAGAGAGCTCCACTGCCTAC +
Preference number: 6 (lower is better)
Translates to: TPGLSWSVARCGQEP*GSDQAAGPESSTAY
Trigger: GTAGGCAGTGGAGCTCTCTGGGCCAGCAGCCTGGTCAGAACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATAGCCCTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS GCA 72 bp CCCACGAGCTTCACAGCTGAGAAGTGGTCCTGGAGCTaGGGCCAGGAGTCAGCGATGTGGGGTTCATGGAAG +
Preference number: 6 (lower is better)
Translates to: PTSFTAEKWSWS*GQESAMWGSWK
Trigger: CTTCCATGAACCCCACATCGCTGACTCCTGGCCGCAGCTCCAGGACCACTTCTCAGCTGTGAAGCTCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000460475.1
ENST00000478082.5
CDS CAA 72 bp CTATCCTGGAGTGTGGCTCGTTGTGGGCAGGAACCTTaGGGTTCTGACCAGGCTGCTGGCCCAGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LSWSVARCGQEP*GSDQAAGPESS
Trigger: GGAGCTCTCTGGGCCAGCAGCCTGGTCAGAACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS GCA 72 bp AAAAAGGCGTATCCGGAGGCTACAGAAAGCTCCAGATaGCGGCGCCACAGACAAGGCGAGGATTGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: KKAYPEATESSR*RRHRQGEDCPG
Trigger: CCCGGGACAATCCTCGCCTTGTCTGTGGCGCCGGCATCTGGAGCTTTCTGTAGCCTCCGGATACGCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000481461.1
CDS GCA 72 bp ACCTTCCTGTTCTCCTCAATGAGGATACGCAGGGTCTaGAGGTTGGTGAGGACAGCGTCGGCGTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: TFLFSSMRIRRV*RLVRTASASRL
Trigger: CAGCCTGGACGCCGACGCTGTCCTCACCAACCTGCAGACCCTGCGTATCCTCATTGAGGAGAACAGGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000440925.1
ENST00000460475.1
ENST00000463479.1
ENST00000478082.5
CDS CCA 72 bp GGCTGCCACTCTGGACGAACTTCTTCAGCAGCTCTGTaGGGCTGCCGGCCAGAATCACGTCGTAGCTATCCA +
Preference number: 6 (lower is better)
Translates to: GCHSGRTSSAAL*GCRPESRRSYP
Trigger: TGGATAGCTACGACGTGATTCTGGCCGGCAGCCCCACAGAGCTGCTGAAGAAGTTCGTCCAGAGTGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223127.8
ENST00000414785.5
ENST00000424135.5
ENST00000478082.5
ENST00000489927.1
CDS CCA 72 bp TATCCTGGAGTGTGGCTCGTTGTGGGCAGGAACCTTTaGGTTCTGACCAGGCTGCTGGCCCAGAGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: YPGVWLVVGRNL*VLTRLLAQRAP
Trigger: TGGAGCTCTCTGGGCCAGCAGCCTGGTCAGAACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS CAA 72 bp ATCCCAGTCCCTGAACATAAGGCCCCTGCATGTCCCTaGTCAAGCACTGCTGGTCCCAACCACCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: IPVPEHKAPACP*SSTAGPNHPTS
Trigger: GGAGGTGGGGTGGTTGGGACCAGCAGTGCTTGACAAGGGACATGCAGGGGCCTTATGTTCAGGGACTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466881.1
CDS CCA 72 bp GTGATCACCAGCAGCTTCTCTGTTACCAGAGGGAAATaGCACTTGAGATCCACCGCCCAGCTCCGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: VITSSFSVTRGK*HLRSTAQLRAS
Trigger: TGAGGCCCGGAGCTGGGCGGTGGATCTCAAGTGCCATTTCCCTCTGGTAACAGAGAAGCTGCTGGTGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489927.1
CDS CCA 72 bp AAGTGGTCCTGGAGCTGCGGCCAGGAGTCAGCGATGTaGGGTTCATGGAAGACCTCGTTGTTGTGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: KWSWSCGQESAM*GSWKTSLLCRK
Trigger: TTTCCTGCACAACAACGAGGTCTTCCATGAACCCCACATCGCTGACTCCTGGCCGCAGCTCCAGGACCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000478082.5
CDS CCA 72 bp GGTATCACCCCGGATCACATAGGCCTGGGAGATGTATaGTACATTCCACACACCCACTCGCTTCCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: GITPDHIGLGDV*YIPHTHSLPLH
Trigger: GTGCAGCGGAAGCGAGTGGGTGTGTGGAATGTACCATACATCTCCCAGGCCTATGTGATCCGGGGTGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000454310.5
CDS CCA 72 bp CAGGGAATAAAGGGACACCAGGGCTATCCTGGAGTGTaGCTCGTTGTGGGCAGGAACCTTTGGGTTCTGACC +
Preference number: 6 (lower is better)
Translates to: QGIKGHQGYPGV*LVVGRNLWVLT
Trigger: GGTCAGAACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATAGCCCTGGTGTCCCTTTATTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS CAA 90 bp CAGCTGGTCGTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTaGGTGGATGGTGGTGGCAAAACCGATGAATCCTCAGGGTACTGC +
Preference number: 6 (lower is better)
Translates to: QLVVVIILVLPLAHD*VDGGGKTDESSGYC
Trigger: GCAGTACCCTGAGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGACGACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS TCA 72 bp AACGCAGGTACCCCTCGGTTTCAGCTGTGGCCACAGTaGTCACCAGCAGCTTCTCTGTTACCAGAGGGAAAT +
Preference number: 6 (lower is better)
Translates to: NAGTPRFQLWPQ*SPAASLLPEGN
Trigger: ATTTCCCTCTGGTAACAGAGAAGCTGCTGGTGATCACTGTGGCCACAGCTGAAACCGAGGGGTACCTGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489927.1
CDS CCA 72 bp AACAGCTGGTCGTCGTCATCATCCTTGTACTTCCACTaGCGCACGATTTGGTGGATGGTGGTGGCAAAACCG +
Preference number: 6 (lower is better)
Translates to: NSWSSSSSLYFH*RTIWWMVVAKP
Trigger: CGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGACGACCAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223127.8
ENST00000421736.1
ENST00000424135.5
ENST00000478082.5
ENST00000489927.1
CDS CCA 72 bp AATTCTCCAGGGAATAAAGGGACACCAGGGCTATCCTaGAGTGTGGCTCGTTGTGGGCAGGAACCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: NSPGNKGTPGLS*SVARCGQEPLG
Trigger: ACCCAAAGGTTCCTGCCCACAACGAGCCACACTCCAGGATAGCCCTGGTGTCCCTTTATTCCCTGGAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478264.1
CDS TCA 72 bp AAAGGCACAATGGCAGGGCAGGTTTGGCAGAGTGGTTaGGTGTCAGGGGTCGACAAAGGACACCATGATGTA +
Preference number: 6 (lower is better)
Translates to: KGTMAGQVWQSG*VSGVDKGHHDV
Trigger: TACATCATGGTGTCCTTTGTCGACCCCTGACACTCAACCACTCTGCCAAACCTGCCCTGCCATTGTGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223127.8
ENST00000454310.5
CDS CCA 72 bp CCCAATATACAGGAGAAGAGGCTGTCTGATCAATGCTaGCTTTGGGGGCAAGAGTCCTTTCTGTTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: PNIQEKRLSDQC*LWGQESFLFGL
Trigger: GAGGCCGAACAGAAAGGACTCTTGCCCCCAAAGCCAGCATTGATCAGACAGCCTCTTCTCCTGTATATTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460132.5
CDS CAA 72 bp GTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTaGGTGGATGGTGGTGGCAAAACCGATGAATCCACC +
Preference number: 6 (lower is better)
Translates to: VVIILVLPLAHD*VDGGGKTDEST
Trigger: GGTGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223127.8
ENST00000478082.5
ENST00000489927.1
CDS CAA 90 bp CAGCTGGTCGTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTaGGTGGATGGTGGTGGCAAAACCGATGAATCCACCAGAATTGAG +
Preference number: 6 (lower is better)
Translates to: QLVVVIILVLPLAHD*VDGGGKTDESTRIE
Trigger: CTCAATTCTGGTGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGACGACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223127.8
ENST00000478082.5
ENST00000489927.1
CDS TCA 72 bp CTCTTCTGCCCGGAGAAGCTCCAGGGGCTGCCTTTGTaGTCACAGCATCTTCACAAGGACCAAAGGAAAATA +
Preference number: 6 (lower is better)
Translates to: LFCPEKLQGLPL*SQHLHKDQRKI
Trigger: TATTTTCCTTTGGTCCTTGTGAAGATGCTGTGATCACAAAGGCAGCCCCTGGAGCTTCTCCGGGCAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414785.5
ENST00000478082.5
CDS CCA 72 bp TCGTCATCATCCTTGTACTTCCACTGGCGCACGATTTaGTGGATGGTGGTGGCAAAACCGATGAATCCACCA +
Preference number: 6 (lower is better)
Translates to: SSSSLYFHWRTI*WMVVAKPMNPP
Trigger: TGGTGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223127.8
ENST00000478082.5
ENST00000489927.1
CDS CCA 72 bp TCATCATCCTTGTACTTCCACTGGCGCACGATTTGGTaGATGGTGGTGGCAAAACCGATGAATCCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: SSSLYFHWRTIW*MVVAKPMNPQG
Trigger: ACCCTGAGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS CCA 72 bp TCGTCATCATCCTTGTACTTCCACTGGCGCACGATTTaGTGGATGGTGGTGGCAAAACCGATGAATCCTCAG +
Preference number: 6 (lower is better)
Translates to: SSSSLYFHWRTI*WMVVAKPMNPQ
Trigger: CTGAGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS CAA 72 bp GTCGTCATCATCCTTGTACTTCCACTGGCGCACGATTaGGTGGATGGTGGTGGCAAAACCGATGAATCCTCA +
Preference number: 6 (lower is better)
Translates to: VVIILVLPLAHD*VDGGGKTDESS
Trigger: TGAGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424135.5
CDS TCA 72 bp GAGTCCTTTCTGTTCGGCCTCTGCCTTCATCTTGTCTaGACAGAAAACCCTCAGATCTCTGGGGAACTCAGT +
Preference number: 6 (lower is better)
Translates to: ESFLFGLCLHLV*TENPQISGELS
Trigger: ACTGAGTTCCCCAGAGATCTGAGGGTTTTCTGTTCAGACAAGATGAAGGCAGAGGCCGAACAGAAAGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460132.5
CDS GCA 72 bp ATACCCAATATACAGGAGAAGAGGCTGTCTGATCAATaGTGGCTTTGGGGGCAAGAGTCCTTTCTGTTCGGC +
Preference number: 6 (lower is better)
Translates to: IPNIQEKRLSDQ*WLWGQESFLFG
Trigger: GCCGAACAGAAAGGACTCTTGCCCCCAAAGCCAGCATTGATCAGACAGCCTCTTCTCCTGTATATTGGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460132.5
CDS CCA 72 bp TCATCATCCTTGTACTTCCACTGGCGCACGATTTGGTaGATGGTGGTGGCAAAACCGATGAATCCACCAGAA +
Preference number: 6 (lower is better)
Translates to: SSSLYFHWRTIW*MVVAKPMNPPE
Trigger: TTCTGGTGGATTCATCGGTTTTGCCACCACCATCCACCAAATCGTGCGCCAGTGGAAGTACAAGGATGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223127.8
ENST00000478082.5
ENST00000489927.1
CDS CAA 72 bp TGGGAACCCCTCTTTGCTCCCATTTTCCTGATTCCATaGTTTGTTTACCAGATCCTGCACCTCCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: WEPLFAPIFLIP*FVYQILHLLLW
Trigger: CCAGAGGAGGAGGTGCAGGATCTGGTAAACAAACAATGGAATCAGGAAAATGGGAGCAAAGAGGGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487563.1