RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLOD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000152952

Ensembl transcript IDs: ENST00000282903.10, ENST00000360060.7, ENST00000460520.1, ENST00000461497.5, ENST00000478436.1, ENST00000480704.1, ENST00000494950.5, ENST00000495700.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGTTCCATGACATTAATCTCACTTTCTaGCCCCCTCCAATACTATTA +
Preference number: 2 (lower is better)
Translates to: AFSKHDNQIILISIVFHDINLTF*PPPILL
Trigger: TAATAGTATTGGAGGGGGCCAGAAAGTGAGATTAAT...GTCATGGAACACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480704.1
3UTR-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTCAAAGACGTGTTCATaGCAGTCATTCATCCAAAAT +
Preference number: 2 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNSKTCS*QSFIQN
Trigger: ATTTTGGATGAATGACTGGCATGAACACGTCTTTGA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
3UTR GCA 72 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATaGCAGTCATTCATCCAAAATAAATTTCAATTCAAT +
Preference number: 3 (lower is better)
Translates to: LIFSATTSKTCS*QSFIQNKFQFN
Trigger: ATTGAATTGAAATTTATTTTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCGGCGGACCGCGGGGTaGTCACCTGTGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSRRTAG*SPVGML
Trigger: GAGCATCCCCACAGGTGAGCACCCCGCGGTCCGCCG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACAGGGATTCCAGGGGTaGAGGACGAGCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQQGFQG*RTSARS
Trigger: GCTCCTGGCGCTCGTCCTCCACCCCTGGAATCCCTG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACGTAACGCAGCTGAGTaGGGTCGTCGGTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQRNAAE*GRRWRH
Trigger: GTGCCTCCACCGACGACCTCACTCAGCTGCGTTACG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282903.10
CDS-3UTR CCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATCAGGGATTCCAGGGGTaGAGGACGAGCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHQGFQG*RTSARS
Trigger: GCTCCTGGCGCTCGTCCTCCACCCCTGGAATCCCTG...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGCTCACCTGTGGGGATaGTCGAGGGCTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQAHLWG*SRASPS
Trigger: ACTCGGAGAAGCCCTCGAGCATCCCCACAGGTGAGC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS-3UTR CCA 90 bp GCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGTTCCATGACCAGGGATTCCAGGGGTaGAGGACGAGCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AFSKHDNQIILISIVFHDQGFQG*RTSARS
Trigger: GCTCCTGGCGCTCGTCCTCCACCCCTGGAATCCCTG...GTCATGGAACACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCGTCTCCCAGGATGCATaGAGCTCCAGCCTTTTCGTG +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSVSQDA*SSSLFV
Trigger: CACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGAC...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGGGATTCCAGGGGTaGAGGACGAGCGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCQGFQG*RTSARS
Trigger: GCTCCTGGCGCTCGTCCTCCACCCCTGGAATCCCTG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCGACCACAGCTTTCCATaGCGAGTTACAAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSDHSFP*RVTRGA
Trigger: TGCTCCTCTTGTAACTCGTCATGGAAAGCTGTGGTC...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCGGGGTGCTCACCTGTaGGGATGCTCGAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCRGAHL*GCSRAS
Trigger: AGAAGCCCTCGAGCATCCCCACAGGTGAGCACCCCG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGCCCCGCGGAAGGGCTaGTGGATGAATGAACTGCCC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCAPRKG*WMNELP
Trigger: GGGCAGTTCATTCATCCACCAGCCCTTCCGCGGGGC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCTCCATTCTTCTCCTTaGCCAAGGACCTTCACAGTA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSLHSSP*PRTFTV
Trigger: TACTGTGAAGGTCCTTGGTCAAGGAGAAGAATGGAG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAATTTATCTGTGGGGATaGTCGAGGGCTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQIYLWG*SRASPS
Trigger: ACTCGGAGAAGCCCTCGAGCATCCCCACAGATAAAT...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282903.10
ENST00000360060.7
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGTGAGTCTCCCAGGATaGATGAAGCTCCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQVSLPG*MKLQPF
Trigger: AAAAGGCTGGAGCTTCATGCATCCTGGGAGACTCAC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCGACCTTCAGTGTAACTaGTGCAATGAACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSDLQCN*CNELPD
Trigger: ATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTC...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCGCCAATAAATCCTCCTaGATTCAGATAGCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSANKSS*IQIAFP
Trigger: GGGAAACGCTATCTGAATTCAGGAGGATTTATTGGC...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATCACACTTTTCATCCTaGCGGCAAAAGTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQSHFSS*RQKSIP
Trigger: GGGAATGGACTTTTGCCGTCAGGATGAAAAGTGTGA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCCAGCCTTTTCGTGGTaGCTCAATAGAGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSPAFSW*LNRAIV
Trigger: TACAATTGCTCTATTGAGTCACCACGAAAAGGCTGG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCGAATTCACAAAGAGTaGAGCCATTATCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSRIHKE*SHYPVS
Trigger: GGACACAGGATAATGGCTGCACTCTTTGTGAATTCG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCTGGATGGACATCTACTaGAGACAAGTCGACTGTATC +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSWMDIY*RQVDCI
Trigger: GATACAGTCGACTTGTCTGCAGTAGATGTCCATCCA...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATCCATCAGGACTCAATaGTCCCCAGAAATTGGACCA +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQSIRTQ*SPEIGP
Trigger: TGGTCCAATTTCTGGGGAGCATTGAGTCCTGATGGA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGACCTTCAGTGTAACTaGTGCAATGAACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQDLQCN*CNELPD
Trigger: ATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGCCAATAAATCCTCCTaGATTCAGATAGCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQANKSS*IQIAFP
Trigger: GGGAAACGCTATCTGAATTCAGGAGGATTTATTGGC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCTTTCTGGCTTCCGCTTaGCTTAGATTTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSFLASA*LRFSSG
Trigger: ACCAGAAGAAAATCTAAGTCAAGCGGAAGCCAGAAA...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCCTTTCATTCATCTCTaGTCGGAGTGTCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSPFIHL*SECLSF
Trigger: AAAGGAAAGACACTCCGATCAGAGATGAATGAAAGG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACTCCCGGATAAAATaGAGCCATACATTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSNSRIK*SHTFSR
Trigger: TCTGGAGAATGTATGGCTTCATTTTATCCGGGAGTT...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGTCTCCCAGGATGCATaGAGCTCCAGCCTTTTCGTG +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCVSQDA*SSSLFV
Trigger: CACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGAC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATCACACTTTTCATCCTaGCGGCAAAAGTCCCTAACA +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQSHFSS*RQKSLT
Trigger: TGTTAGGGACTTTTGCCGTCAGGATGAAAAGTGTGA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461497.5
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCCACAAAATTCCATCTaGTGCAAAGACCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSPQNSI*CKDHFV
Trigger: CACAAAGTGGTCTTTGCAGCAGATGGAATTTTGTGG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCTTCAGTGTAACTGGTaGAATGAACTCCCGGATAAA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSLQCNW*NELPDK
Trigger: TTTATCCGGGAGTTCATTGCACCAGTTACACTGAAG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACCATTCCCATGTTTCTaGCTTCCGCTTGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQPFPCF*LPLDLD
Trigger: ATCTAAGTCAAGCGGAAGCCAGAAACATGGGAATGG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGTTGAACTATACGGTTaGCATATGGAGCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQVELYG*HMEHSQ
Trigger: TTGGCTATGCTCCATATGTCAACCGTATAGTTCAAC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATTTCTGGCTTCCGCTTaGCTTAGATTTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQFLASA*LRFSSG
Trigger: ACCAGAAGAAAATCTAAGTCAAGCGGAAGCCAGAAA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAAACTCCCGGATAAAATaGAGCCATACATTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQNSRIK*SHTFSR
Trigger: TCTGGAGAATGTATGGCTTCATTTTATCCGGGAGTT...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATCCAGCCTTTTCGTGGTaGCTCAATAGAGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHPAFSW*LNRAIV
Trigger: TACAATTGCTCTATTGAGTCACCACGAAAAGGCTGG...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATGTCTCCCAGGATGCATaGAGCTCCAGCCTTTTCGTG +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNVSQDA*SSSLFV
Trigger: CACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGAC...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCATGTTTGGCCCAAAGTaGAGTTGTTCTGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSMFGPK*SCSVDV
Trigger: AACATCAACAGAACAACTTCACTTTGGGCCAAACAT...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCACTGGAGATACCAGATaGCATTTGGGTTATCAACTT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSTGDTR*HLGYQL
Trigger: AAGTTGATAACCCAAATGTCATCTGGTATCTCCAGT...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461497.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATCGAATTCACAAAGAGTaGAGCCATTATCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHRIHKE*SHYPVS
Trigger: GGACACAGGATAATGGCTGCACTCTTTGTGAATTCG...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTGGATGGACATCTACTaGAGACAAGTCGACTGTATC +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHWMDIY*RQVDCI
Trigger: GATACAGTCGACTTGTCTGCAGTAGATGTCCATCCA...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATTCCCCCAGACCATTTaGCGTAATGTTCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQFPQTI*RNVPFL
Trigger: AAGAAATGGAACATTACGGCAAATGGTCTGGGGGAA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCTGTACCTTAGAAATTTaGAACCACCTCCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSCTLEI*NHLPES
Trigger: ACTTTCAGGGAGGTGGTTGCAAATTTCTAAGGTACA...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACTAATAATTTATCTGTaGGGATGCTCGAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQLIIYL*GCSRAS
Trigger: AGAAGCCCTCGAGCATCCCCACAGATAAATTATTAG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282903.10
ENST00000360060.7
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGAACCAAAAGACATCTaGACAGGGCTGTTCAACTAT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQEPKDI*TGLFNY
Trigger: ATAGTTGAACAGCCCTGTCCAGATGTCTTTTGGTTC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCGTGGATATCATCAGTTaGGACATTTTCATAACCACC +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSVDIIS*DIFITT
Trigger: GGTGGTTATGAAAATGTCCCAACTGATGATATCCAC...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTTATCAACTTCCCTCTaGGCTCCCCTCCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCLSTSL*APLPHC
Trigger: ACAGTGAGGGAGGGGAGCCCAGAGGGAAGTTGATAA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461497.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCCTTCACAGTATAATTaGAATATTTGGCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSPSQYN*NIWLTA
Trigger: TGCAGTCAGCCAAATATTTCAATTATACTGTGAAGG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCAGCATAGTGTTCCATaGCTTCTTTCATTAATCTCA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSQHSVP*LLSLIS
Trigger: TGAGATTAATGAAAGAAGTCATGGAACACTATGCTG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATGTTGAACTATACGGTTaGCATATGGAGCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHVELYG*HMEHSQ
Trigger: TTGGCTATGCTCCATATGTCAACCGTATAGTTCAAC...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp AGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGTTCCATGACTTCTTTATTTATCTGTGGGGATaGTCGAGGGCTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SKHDNQIILISIVFHDFFIYLWG*SRASPS
Trigger: ACTCGGAGAAGCCCTCGAGCATCCCCACAGATAAAT...AAAGAAGTCATGGAACACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCATAATCTTCAGATCGTaGATAGTATCCATCAGGACT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSIIFRS*IVSIRT
Trigger: AGTCCTGATGGATACTATGCACGATCTGAAGATTAT...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTTCCCCCAGACCATTTaGCGTAATGTTCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHFPQTI*RNVPFL
Trigger: AAGAAATGGAACATTACGGCAAATGGTCTGGGGGAA...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATCTTCAGTGTAACTGGTaGAATGAACTCCCGGATAAA +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHLQCNW*NELPDK
Trigger: TTTATCCGGGAGTTCATTGCACCAGTTACACTGAAG...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACTTCGTATAATAGCCTaGAAAGACCTTCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQLRIIA*KDLQCN
Trigger: GTTACACTGAAGGTCTTTGCAGGCTATTATACGAAG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATGTACCTTAGAAATTTaGAACCACCTCCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQCTLEI*NHLPES
Trigger: ACTTTCAGGGAGGTGGTTGCAAATTTCTAAGGTACA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGTGAGTCTCCCAGGATaGATGAAGCTCCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCVSLPG*MKLQPF
Trigger: AAAAGGCTGGAGCTTCATGCATCCTGGGAGACTCAC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCTCAAAGACGTGTTCATaGCAGTCATTCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSSKTCS*QSFIQN
Trigger: ATTTTGGATGAATGACTGGCATGAACACGTCTTTGA...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACACATTAGCCATATATaGGACATTCCATACTCCTAC +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQHISHI*DIPYSY
Trigger: GTAGGAGTATGGAATGTCCCATATATGGCTAATGTG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATGAACCAAAAGACATCTaGACAGGGCTGTTCAACTAT +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHEPKDI*TGLFNY
Trigger: ATAGTTGAACAGCCCTGTCCAGATGTCTTTTGGTTC...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGTGGATATCATCAGTTaGGACATTTTCATAACCACC +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQVDIIS*DIFITT
Trigger: GGTGGTTATGAAAATGTCCCAACTGATGATATCCAC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACCTTCACAGTATAATTaGAATATTTGGCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQPSQYN*NIWLTA
Trigger: TGCAGTCAGCCAAATATTTCAATTATACTGTGAAGG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACAGCATAGTGTTCCATaGCTTCTTTCATTAATCTCA +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQQHSVP*LLSLIS
Trigger: TGAGATTAATGAAAGAAGTCATGGAACACTATGCTG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTCTTACCAGGGGCAGTaGCTATGTTTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNSYQGQ*LCLLSL
Trigger: CAGGGAAAGCAAACATAGTCACTGCCCCTGGTAAGA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461497.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATATTTATCTGTGGGGATaGTCGAGGGCTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNIYLWG*SRASPS
Trigger: ACTCGGAGAAGCCCTCGAGCATCCCCACAGATAAAT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282903.10
ENST00000360060.7
CDS-3UTR GCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAATATTTGGCTGACTaGATAAATCGATGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSKYLAD*INRWNP
Trigger: TGGATTCCATCGATTTATGCAGTCAGCCAAATATTT...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTCCATCAGGACTCAATaGTCCCCAGAAATTGGACCA +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCSIRTQ*SPEIGP
Trigger: TGGTCCAATTTCTGGGGAGCATTGAGTCCTGATGGA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATTCTCCAGATCAACTTaGTTCATGTGGATATCATCA +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQFSRST*FMWISS
Trigger: TGATGATATCCACATGAAGCAAGTTGATCTGGAGAA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATCTTCGTATAATAGCCTaGAAAGACCTTCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHLRIIA*KDLQCN
Trigger: GTTACACTGAAGGTCTTTGCAGGCTATTATACGAAG...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATGTGAGTCTCCCAGGATaGATGAAGCTCCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNVSLPG*MKLQPF
Trigger: AAAAGGCTGGAGCTTCATGCATCCTGGGAGACTCAC...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATCAAAGACGTGTTCATaGCAGTCATTCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQSKTCS*QSFIQN
Trigger: ATTTTGGATGAATGACTGGCATGAACACGTCTTTGA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCTTTAAGTGCTTCTTTTaGGTAATCCAGTGTCAACAA +
Preference number: 4 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSFKCFF*VIQCQQ
Trigger: TTGTTGACACTGGATTACCCAAAAGAAGCACTTAAA...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATCACATTAGCCATATATaGGACATTCCATACTCCTAC +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHHISHI*DIPYSY
Trigger: GTAGGAGTATGGAATGTCCCATATATGGCTAATGTG...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGACCTTCAGTGTAACTaGTGCAATGAACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCDLQCN*CNELPD
Trigger: ATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGCCAATAAATCCTCCTaGATTCAGATAGCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCANKSS*IQIAFP
Trigger: GGGAAACGCTATCTGAATTCAGGAGGATTTATTGGC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTGGAGATTCCATTGTTaGACTATACGGTTGACATAT +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHWRFHC*TIRLTY
Trigger: ATATGTCAACCGTATAGTTCAACAATGGAATCTCCA...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTCACACTTTTCATCCTaGCGGCAAAAGTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNSHFSS*RQKSIP
Trigger: GGGAATGGACTTTTGCCGTCAGGATGAAAAGTGTGA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp GACATCAAAGCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGCCACAAAATTCCATCTaGTGCAAAGACCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: DIKAFSKHDNQIILISIVPQNSI*CKDHFV
Trigger: CACAAAGTGGTCTTTGCAGCAGATGGAATTTTGTGG...CACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGCTTTGATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCGAATTCACAAAGAGTaGAGCCATTATCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCRIHKE*SHYPVS
Trigger: GGACACAGGATAATGGCTGCACTCTTTGTGAATTCG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTGGATGGACATCTACTaGAGACAAGTCGACTGTATC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCWMDIY*RQVDCI
Trigger: GATACAGTCGACTTGTCTGCAGTAGATGTCCATCCA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATATAATCTTCAGATCGTaGATAGTATCCATCAGGACT +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHIIFRS*IVSIRT
Trigger: AGTCCTGATGGATACTATGCACGATCTGAAGATTAT...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCACAGGAAGTCCTTCATaGAAATGTGTGAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCTGSPS*KCVSLP
Trigger: TGGGAGACTCACACATTTGCATGAAGGACTTCCTGT...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCAAAGACGTGTTCATaGCAGTCATTCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHSKTCS*QSFIQN
Trigger: ATTTTGGATGAATGACTGGCATGAACACGTCTTTGA...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGACTGCATAAATCGATaGAATCCATCACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQDCINR*NPSLSF
Trigger: AAAAGAAAGTGATGGATTCCATCGATTTATGCAGTC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATATTAATCTCACTTTCTaGCCCCCTCCAATACTATTA +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHINLTF*PPPILL
Trigger: TAATAGTATTGGAGGGGGCCAGAAAGTGAGATTAAT...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATCCTGTGTCCATGAATTaGGTACATAGTTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHPVSMN*VHSFQN
Trigger: ATTTTGGAAACTATGTACCCAATTCATGGACACAGG...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCCATTCCCATGTTTCTaGCTTCCGCTTGACTTAGAT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCPFPCF*LPLDLD
Trigger: ATCTAAGTCAAGCGGAAGCCAGAAACATGGGAATGG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATGACCTTCAGTGTAACTaGTGCAATGAACTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNDLQCN*CNELPD
Trigger: ATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTC...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCAACTCCCGGATAAAATaGAGCCATACATTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCNSRIK*SHTFSR
Trigger: TCTGGAGAATGTATGGCTTCATTTTATCCGGGAGTT...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATCCAGCCTTTTCGTGGTaGCTCAATAGAGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNPAFSW*LNRAIV
Trigger: TACAATTGCTCTATTGAGTCACCACGAAAAGGCTGG...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATAAATATTTGGCTGACTaGATAAATCGATGGAATCCA +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHKYLAD*INRWNP
Trigger: TGGATTCCATCGATTTATGCAGTCAGCCAAATATTT...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCCACAAAATTCCATCTaGTGCAAAGACCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCPQNSI*CKDHFV
Trigger: CACAAAGTGGTCTTTGCAGCAGATGGAATTTTGTGG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCTTCAGTGTAACTGGTaGAATGAACTCCCGGATAAA +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCLQCNW*NELPDK
Trigger: TTTATCCGGGAGTTCATTGCACCAGTTACACTGAAG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATACAGGAAGTCCTTCATaGAAATGTGTGAGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNTGSPS*KCVSLP
Trigger: TGGGAGACTCACACATTTGCATGAAGGACTTCCTGT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATAGCTTCCCTTTTCAGTaGATCAATGTAAACTTTAGT +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHSFPFQ*INVNFS
Trigger: ACTAAAGTTTACATTGATCCACTGAAAAGGGAAGCT...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTTTAAGTGCTTCTTTTaGGTAATCCAGTGTCAACAA +
Preference number: 4 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHFKCFF*VIQCQQ
Trigger: TTGTTGACACTGGATTACCCAAAAGAAGCACTTAAA...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGAACCAAAAGACATCTaGACAGGGCTGTTCAACTAT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCEPKDI*TGLFNY
Trigger: ATAGTTGAACAGCCCTGTCCAGATGTCTTTTGGTTC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp GACATCAAAGCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGCAGCATAGTGTTCCATaGCTTCTTTCATTAATCTCA +
Preference number: 4 (lower is better)
Translates to: DIKAFSKHDNQIILISIVQHSVP*LLSLIS
Trigger: TGAGATTAATGAAAGAAGTCATGGAACACTATGCTG...CACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGCTTTGATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS-3UTR TCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCATTATCCTGTGTCCATaGATTGGGTACATAGTTTCC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCIILCP*IGYIVS
Trigger: GGAAACTATGTACCCAATTCATGGACACAGGATAAT...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATAACTCCCGGATAAAATaGAGCCATACATTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNNSRIK*SHTFSR
Trigger: TCTGGAGAATGTATGGCTTCATTTTATCCGGGAGTT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATCCACAAAATTCCATCTaGTGCAAAGACCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNPQNSI*CKDHFV
Trigger: CACAAAGTGGTCTTTGCAGCAGATGGAATTTTGTGG...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTTCCCCCAGACCATTTaGCGTAATGTTCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNFPQTI*RNVPFL
Trigger: AAGAAATGGAACATTACGGCAAATGGTCTGGGGGAA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATCTTCAGTGTAACTGGTaGAATGAACTCCCGGATAAA +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNLQCNW*NELPDK
Trigger: TTTATCCGGGAGTTCATTGCACCAGTTACACTGAAG...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCTTCGTATAATAGCCTaGAAAGACCTTCAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCLRIIA*KDLQCN
Trigger: GTTACACTGAAGGTCTTTGCAGGCTATTATACGAAG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp GCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGTTCCATGACGACTGCATAAATCGATaGAATCCATCACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: AFSKHDNQIILISIVFHDDCINR*NPSLSF
Trigger: AAAAGAAAGTGATGGATTCCATCGATTTATGCAGTC...GTCATGGAACACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCACATTAGCCATATATaGGACATTCCATACTCCTAC +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCHISHI*DIPYSY
Trigger: GTAGGAGTATGGAATGTCCCATATATGGCTAATGTG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGCATAGTGTTCCATaGCTTCTTTCATTAATCTCA +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCQHSVP*LLSLIS
Trigger: TGAGATTAATGAAAGAAGTCATGGAACACTATGCTG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTGGAGATTCCATTGTTaGACTATACGGTTGACATAT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCWRFHC*TIRLTY
Trigger: ATATGTCAACCGTATAGTTCAACAATGGAATCTCCA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATATTATCCTGTGTCCATaGATTGGGTACATAGTTTCC +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNIILCP*IGYIVS
Trigger: GGAAACTATGTACCCAATTCATGGACACAGGATAAT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATATGTTTGGCCCAAAGTaGAGTTGTTCTGTTGATGTT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNMFGPK*SCSVDV
Trigger: AACATCAACAGAACAACTTCACTTTGGGCCAAACAT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATAGCAATATCAAGGAATaGACAACTGGAGATACCAGA +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNSNIKE*TTGDTR
Trigger: TCTGGTATCTCCAGTTGTTCATTCCTTGATATTGCT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461497.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTTCTCCAGATCAACTTaGTTCATGTGGATATCATCA +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCFSRST*FMWISS
Trigger: TGATGATATCCACATGAAGCAAGTTGATCTGGAGAA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTGTACCTTAGAAATTTaGAACCACCTCCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNCTLEI*NHLPES
Trigger: ACTTTCAGGGAGGTGGTTGCAAATTTCTAAGGTACA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR GCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTCAAAGACGTGTTCATaGCAGTCATTCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCSKTCS*QSFIQN
Trigger: ATTTTGGATGAATGACTGGCATGAACACGTCTTTGA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCATTAATCTCACTTTCTaGCCCCCTCCAATACTATTA +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCINLTF*PPPILL
Trigger: TAATAGTATTGGAGGGGGCCAGAAAGTGAGATTAAT...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCCTGTGTCCATGAATTaGGTACATAGTTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCPVSMN*VHSFQN
Trigger: ATTTTGGAAACTATGTACCCAATTCATGGACACAGG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATCACATTAGCCATATATaGGACATTCCATACTCCTAC +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNHISHI*DIPYSY
Trigger: GTAGGAGTATGGAATGTCCCATATATGGCTAATGTG...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATGTGGATATCATCAGTTaGGACATTTTCATAACCACC +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNVDIIS*DIFITT
Trigger: GGTGGTTATGAAAATGTCCCAACTGATGATATCCAC...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATCCTTCACAGTATAATTaGAATATTTGGCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNPSQYN*NIWLTA
Trigger: TGCAGTCAGCCAAATATTTCAATTATACTGTGAAGG...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR TCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTGGAGATTCCATTGTTaGACTATACGGTTGACATAT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNWRFHC*TIRLTY
Trigger: ATATGTCAACCGTATAGTTCAACAATGGAATCTCCA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR GCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATATAATCTTCAGATCGTaGATAGTATCCATCAGGACT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNIIFRS*IVSIRT
Trigger: AGTCCTGATGGATACTATGCACGATCTGAAGATTAT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CCA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCAGCTTCCCTTTTCAGTaGATCAATGTAAACTTTAGT +
Preference number: 4 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCSFPFQ*INVNFS
Trigger: ACTAAAGTTTACATTGATCCACTGAAAAGGGAAGCT...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATGACTGCATAAATCGATaGAATCCATCACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNDCINR*NPSLSF
Trigger: AAAAGAAAGTGATGGATTCCATCGATTTATGCAGTC...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATAGCTTCCCTTTTCAGTaGATCAATGTAAACTTTAGT +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNSFPFQ*INVNFS
Trigger: ACTAAAGTTTACATTGATCCACTGAAAAGGGAAGCT...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CCA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTTTAAGTGCTTCTTTTaGGTAATCCAGTGTCAACAA +
Preference number: 4 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNFKCFF*VIQCQQ
Trigger: TTGTTGACACTGGATTACCCAAAAGAAGCACTTAAA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS CCA 90 bp GGCCGAGCCTCGCGGGACAGCGGCGGACCGCGGGGTGCTCACCTGTaGGGATGCTCGAGGGCTTCTCCGAGTCCGCACCCAGACAGGGAT +
Preference number: 5 (lower is better)
Translates to: GRASRDSGGPRGAHL*GCSRASPSPHPDRD
Trigger: ATCCCTGTCTGGGTGCGGACTCGGAGAAGCCCTCGAGCATCCCCACAGGTGAGCACCCCGCGGTCCGCCGCTGTCCCGCGAGGCTCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS GCA 90 bp GCCTCGCGGGACAGCGGCGGACCGCGGGGTGCTCACCTGTGGGGATaGTCGAGGGCTTCTCCGAGTCCGCACCCAGACAGGGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASRDSGGPRGAHLWG*SRASPSPHPDRDSR
Trigger: CCTGGAATCCCTGTCTGGGTGCGGACTCGGAGAAGCCCTCGAGCATCCCCACAGGTGAGCACCCCGCGGTCCGCCGCTGTCCCGCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS GCA 90 bp CCTCTGGGCTCCCCTCCCTCACTGTCGGTCCCAGTCAGCACTTTTTaGTGTTGTCAGTGTGTGTCTCCACACCATATTTGTTCGAAGCAA +
Preference number: 5 (lower is better)
Translates to: PLGSPPSLSVPVSTF*CCQCVSPHHICSKQ
Trigger: TTGCTTCGAACAAATATGGTGTGGAGACACACACTGACAACAGCAAAAAGTGCTGACTGGGACCGACAGTGAGGGAGGGGAGCCCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS CCA 90 bp AACAACTGGAGATACCAGATGACATTTGGGTTATCAACTTCCCTCTaGGCTCCCCTCCCTCACTGTCGGTCCCAGTCAGCACTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: NNWRYQMTFGLSTSL*APLPHCRSQSALFA
Trigger: AGCAAAAAGTGCTGACTGGGACCGACAGTGAGGGAGGGGAGCCCAGAGGGAAGTTGATAACCCAAATGTCATCTGGTATCTCCAGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS CCA 90 bp ATGACTGATCCCATCACCAAGGTAGTGAGCACAGTACCCATTAGTTaGTTTTTCAACCCTTGTCCCCCTCCCTACTCCCTCACTCCTCTA +
Preference number: 5 (lower is better)
Translates to: MTDPITKVVSTVPIS*FFNPCPPPYSLTPL
Trigger: TAGAGGAGTGAGGGAGTAGGGAGGGGGACAAGGGTTGAAAAACCAACTAATGGGTACTGTGCTCACTACCTTGGTGATGGGATCAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS CCA 90 bp TCAGCAATATCAAGGAATGAACAACTGGAGATACCAGATGACATTTaGGTTATCAACTTCCCTCTGGGCTCCCCTCCCTCACTGTCGGTC +
Preference number: 5 (lower is better)
Translates to: SAISRNEQLEIPDDI*VINFPLGSPPSLSV
Trigger: GACCGACAGTGAGGGAGGGGAGCCCAGAGGGAAGTTGATAACCCAAATGTCATCTGGTATCTCCAGTTGTTCATTCCTTGATATTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461497.5
ENST00000478436.1
CDS-3UTR CAA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCTCTCCATTCTTCTCCTaGACCAAGGACCTTCACAGT +
Preference number: 5 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSSPFFS*TKDLHS
Trigger: ACTGTGAAGGTCCTTGGTCAAGGAGAAGAATGGAGA...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCACCTATTGATACGTTaGGATGGACATCTACTGCAG +
Preference number: 5 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSHLLIR*DGHLLQ
Trigger: CTGCAGTAGATGTCCATCCAAACGTATCAATAGGTG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS GCA 90 bp TTTTTAACAGGAAGTCCTTCATGCAAATGTGTGAGTCTCCCAGGATaGATGAAGCTCCAGCCTTTTCGTGGTGACTCAATAGAGCAATTG +
Preference number: 5 (lower is better)
Translates to: FLTGSPSCKCVSLPG*MKLQPFRGDSIEQL
Trigger: CAATTGCTCTATTGAGTCACCACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGACTCACACATTTGCATGAAGGACTTCCTGTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
ENST00000495700.1
CDS-3UTR CAA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACACCTATTGATACGTTaGGATGGACATCTACTGCAG +
Preference number: 5 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQHLLIR*DGHLLQ
Trigger: CTGCAGTAGATGTCCATCCAAACGTATCAATAGGTG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCTCCTCGGTTGTGTTTaGTACCATTTTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSLLGCV*YHFLEE
Trigger: TTCCTCAAGAAAATGGTACAAAACACAACCGAGGAG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
CDS-3UTR CAA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCGTATACGCTCCTCGGTaGTGTTTTGTACCATTTTCT +
Preference number: 5 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSVYAPR*CFVPFS
Trigger: AGAAAATGGTACAAAACACAACCGAGGAGCGTATAC...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
CDS GCA 90 bp GGACATCTACTGCAGACAAGTCGACTGTATCGAATTCACAAAGAGTaGAGCCATTATCCTGTGTCCATGAATTGGGTACATAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: GHLLQTSRLYRIHKE*SHYPVSMNWVHSFQ
Trigger: TTGGAAACTATGTACCCAATTCATGGACACAGGATAATGGCTGCACTCTTTGTGAATTCGATACAGTCGACTTGTCTGCAGTAGATGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS CCA 90 bp TGCAAATCCCTTCGTATAATAGCCTGCAAAGACCTTCAGTGTAACTaGTGCAATGAACTCCCGGATAAAATGAAGCCATACATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: CKSLRIIACKDLQCN*CNELPDKMKPYILQ
Trigger: CTGGAGAATGTATGGCTTCATTTTATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTCTTTGCAGGCTATTATACGAAGGGATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAAGACAACCAGATCATCTaGATCAGCATAGTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQDNQII*ISIVFH
Trigger: ATGGAACACTATGCTGATCAAGATGATCTGGTTGTC...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCCTGGAGATTCCATTGTaGAACTATACGGTTGACATA +
Preference number: 5 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSLEIPL*NYTVDI
Trigger: TATGTCAACCGTATAGTTCAACAATGGAATCTCCAG...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACTCCTCGGTTGTGTTTaGTACCATTTTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQLLGCV*YHFLEE
Trigger: TTCCTCAAGAAAATGGTACAAAACACAACCGAGGAG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
CDS-3UTR CAA 90 bp GCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGTTCCATGACTCTCCATTCTTCTCCTaGACCAAGGACCTAGGTATC +
Preference number: 5 (lower is better)
Translates to: AFSKHDNQIILISIVFHDSPFFS*TKDLGI
Trigger: GATACCTAGGTCCTTGGTCAAGGAGAAGAATGGAGA...GTCATGGAACACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS TCA 90 bp GCAAAGACCTTCAGTGTAACTGGTGCAATGAACTCCCGGATAAAATaGAGCCATACATTCTCCAGATCAACTTGCTTCATGTGGATATCA +
Preference number: 5 (lower is better)
Translates to: AKTFSVTGAMNSRIK*SHTFSRSTCFMWIS
Trigger: TGATATCCACATGAAGCAAGTTGATCTGGAGAATGTATGGCTTCATTTTATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS GCA 90 bp TCCTACTCTATTCCCTTGAACAATATCCACATAATCTTCAGATCGTaGATAGTATCCATCAGGACTCAATGCTCCCCAGAAATTGGACCA +
Preference number: 5 (lower is better)
Translates to: SYSIPLNNIHIIFRS*IVSIRTQCSPEIGP
Trigger: TGGTCCAATTTCTGGGGAGCATTGAGTCCTGATGGATACTATGCACGATCTGAAGATTATGTGGATATTGTTCAAGGGAATAGAGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000478436.1
ENST00000494950.5
CDS GCA 90 bp AAATCCCTTCGTATAATAGCCTGCAAAGACCTTCAGTGTAACTGGTaGAATGAACTCCCGGATAAAATGAAGCCATACATTCTCCAGATC +
Preference number: 5 (lower is better)
Translates to: KSLRIIACKDLQCNW*NELPDKMKPYILQI
Trigger: GATCTGGAGAATGTATGGCTTCATTTTATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTCTTTGCAGGCTATTATACGAAGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATGCACAACAGGATACTaGTCTGCTAGTCTTTTATCT +
Preference number: 5 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQCTTGY*SASLLS
Trigger: AGATAAAAGACTAGCAGACAAGTATCCTGTTGTGCA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAACTGGAGATTCCATTGTaGAACTATACGGTTGACATA +
Preference number: 5 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQLEIPL*NYTVDI
Trigger: TATGTCAACCGTATAGTTCAACAATGGAATCTCCAG...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCTCCTACTCTATTCCCTaGAACAATATCCACATAATC +
Preference number: 5 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSSYSIP*NNIHII
Trigger: GATTATGTGGATATTGTTCAAGGGAATAGAGTAGGA...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp CTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCAATGTGGATATCATCAGTaGGGACATTTTCATAACCAC +
Preference number: 5 (lower is better)
Translates to: LIFSATTSKTCSCQSFIQCGYHQ*GHFHNH
Trigger: GTGGTTATGAAAATGTCCCAACTGATGATATCCACA...TTGGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATGTATACGCTCCTCGGTaGTGTTTTGTACCATTTTCT +
Preference number: 5 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHVYAPR*CFVPFS
Trigger: AGAAAATGGTACAAAACACAACCGAGGAGCGTATAC...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
CDS-3UTR CAA 90 bp CTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCATCCGGACACTTGCTGATCTaGACACTTGATAATACTTTA +
Preference number: 5 (lower is better)
Translates to: LSSSQPQLQRRVHASHSSGHLLI*TLDNTL
Trigger: TAAAGTATTATCAAGTGTCAAGATCAGCAAGTGTCC...GGATGAATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
CDS GCA 90 bp AACCACCAGATATACGGCTATCATGATGTTTTCCCCCAGACCATTTaGCGTAATGTTCCATTTCTTCTACCAATTCATCACAGGCTTTTT +
Preference number: 5 (lower is better)
Translates to: NHQIYGYHDVFPQTI*RNVPFLLPIHHRLF
Trigger: AAAAAGCCTGTGATGAATTGGTAGAAGAAATGGAACATTACGGCAAATGGTCTGGGGGAAAACATCATGATAGCCGTATATCTGGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTCTCCATTCTTCTCCTaGACCAAGGACCTTCACAGT +
Preference number: 5 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCSPFFS*TKDLHS
Trigger: ACTGTGAAGGTCCTTGGTCAAGGAGAAGAATGGAGA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp GACATCAAAGCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGGCTGCAAAGACCACTTaGTGGTTTGCCTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: DIKAFSKHDNQIILISIVAAKTT*WFAFWN
Trigger: ATTCCAAAAGGCAAACCACAAAGTGGTCTTTGCAGC...CACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGCTTTGATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS-3UTR CAA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTGCACAACAGGATACTaGTCTGCTAGTCTTTTATCT +
Preference number: 5 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHCTTGY*SASLLS
Trigger: AGATAAAAGACTAGCAGACAAGTATCCTGTTGTGCA...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS GCA 90 bp AAATTTGCAACCACCTCCCTGAAAGTCTTCTCCCACGTTATTAAGTaGAATGTTTATGGTAAATGTAGAAGCATCATGATGAGGACGAAG +
Preference number: 5 (lower is better)
Translates to: KFATTSLKVFSHVIK*NVYGKCRSIMMRTK
Trigger: CTTCGTCCTCATCATGATGCTTCTACATTTACCATAAACATTGCACTTAATAACGTGGGAGAAGACTTTCAGGGAGGTGGTTGCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
ENST00000495700.1
CDS-3UTR CAA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTCTCCATTCTTCTCCTaGACCAAGGACCTTCACAGT +
Preference number: 5 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNSPFFS*TKDLHS
Trigger: ACTGTGAAGGTCCTTGGTCAAGGAGAAGAATGGAGA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGCTGCAAAGACCACTTaGTGGTTTGCCTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCAAKTT*WFAFWN
Trigger: ATTCCAAAAGGCAAACCACAAAGTGGTCTTTGCAGC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATTCCTACTCTATTCCCTaGAACAATATCCACATAATC +
Preference number: 5 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHSYSIP*NNIHII
Trigger: GATTATGTGGATATTGTTCAAGGGAATAGAGTAGGA...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp ATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCAGTCATGGACACTTGCTGATCTaGACACTTGATAATACTTTA +
Preference number: 5 (lower is better)
Translates to: IFLSSSQPQLQRRVHASHGHLLI*TLDNTL
Trigger: TAAAGTATTATCAAGTGTCAAGATCAGCAAGTGTCC...ATGACTGGCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
CDS TCA 90 bp GACTGTATCGAATTCACAAAGAGTGCAGCCATTATCCTGTGTCCATaGATTGGGTACATAGTTTCCAAAATAATTCAGGAGAATCTTGGT +
Preference number: 5 (lower is better)
Translates to: DCIEFTKSAAIILCP*IGYIVSKIIQENLG
Trigger: ACCAAGATTCTCCTGAATTATTTTGGAAACTATGTACCCAATTCATGGACACAGGATAATGGCTGCACTCTTTGTGAATTCGATACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS CCA 90 bp CCATACATTCTCCAGATCAACTTGCTTCATGTGGATATCATCAGTTaGGACATTTTCATAACCACCAGATATACGGCTATCATGATGTTT +
Preference number: 5 (lower is better)
Translates to: PYILQINLLHVDIIS*DIFITTRYTAIMMF
Trigger: AAACATCATGATAGCCGTATATCTGGTGGTTATGAAAATGTCCCAACTGATGATATCCACATGAAGCAAGTTGATCTGGAGAATGTATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCGACAACCAGATCATCTaGATCAGCATAGTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCDNQII*ISIVFH
Trigger: ATGGAACACTATGCTGATCAAGATGATCTGGTTGTC...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATGCTGCAAAGACCACTTaGTGGTTTGCCTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNAAKTT*WFAFWN
Trigger: ATTCCAAAAGGCAAACCACAAAGTGGTCTTTGCAGC...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATCACCTATTGATACGTTaGGATGGACATCTACTGCAG +
Preference number: 5 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNHLLIR*DGHLLQ
Trigger: CTGCAGTAGATGTCCATCCAAACGTATCAATAGGTG...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp AAAGCATTCAGTAAACATGACAACCAGATCATCTTGATCAGCATAGTGTTCCATTGCACAACAGGATACTaGTCTGCTAGTCTTTTATCT +
Preference number: 5 (lower is better)
Translates to: KAFSKHDNQIILISIVFHCTTGY*SASLLS
Trigger: AGATAAAAGACTAGCAGACAAGTATCCTGTTGTGCA...ATGGAACACTATGCTGATCAAGATGATCTGGTTGTCATGTTTACTGAATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480704.1
CDS-3UTR CAA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTGCACAACAGGATACTaGTCTGCTAGTCTTTTATCT +
Preference number: 5 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCCTTGY*SASLLS
Trigger: AGATAAAAGACTAGCAGACAAGTATCCTGTTGTGCA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCCTGGAGATTCCATTGTaGAACTATACGGTTGACATA +
Preference number: 5 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCLEIPL*NYTVDI
Trigger: TATGTCAACCGTATAGTTCAACAATGGAATCTCCAG...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS-3UTR CAA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTGTGGATATCATCAGTaGGGACATTTTCATAACCAC +
Preference number: 5 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCCGYHQ*GHFHNH
Trigger: GTGGTTATGAAAATGTCCCAACTGATGATATCCACA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATGTATACGCTCCTCGGTaGTGTTTTGTACCATTTTCT +
Preference number: 5 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNVYAPR*CFVPFS
Trigger: AGAAAATGGTACAAAACACAACCGAGGAGCGTATAC...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
CDS CCA 90 bp AGCCCTTTATGTATAAATACGTACAAACATAGACACAGTCTAAGTTaGCTACTGCATACGCAAACAAATAGTTTGAGACACCCAAATTTG +
Preference number: 5 (lower is better)
Translates to: SPLCINTYKHRHSLS*LLHTQTNSLRHPNL
Trigger: CAAATTTGGGTGTCTCAAACTATTTGTTTGCGTATGCAGTAGCCAACTTAGACTGTGTCTATGTTTGTACGTATTTATACATAAAGGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS-3UTR CAA 90 bp TATTTAAATATTCCTCTCATCTTCTCAGCCACAACTTCAAAGACGTGTTCATGCTCCTACTCTATTCCCTaGAACAATATCCACATAATC +
Preference number: 5 (lower is better)
Translates to: YLNIPLIFSATTSKTCSCSYSIP*NNIHII
Trigger: GATTATGTGGATATTGTTCAAGGGAATAGAGTAGGA...GCATGAACACGTCTTTGAAGTTGTGGCTGAGAAGATGAGAGGAATATTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS-3UTR CAA 90 bp TGTGTTCCCTTAGTAACTACTGTAAATAAGACCTGCATAGGTGTTCAGAAAAATTGTGGATATCATCAGTaGGGACATTTTCATAACCAC +
Preference number: 5 (lower is better)
Translates to: CVPLVTTVNKTCIGVQKNCGYHQ*GHFHNH
Trigger: GTGGTTATGAAAATGTCCCAACTGATGATATCCACA...ATTTTTCTGAACACCTATGCAGGTCTTATTTACAGTAGTTACTAAGGGAACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS CCA 72 bp TCGCGGGACAGCGGCGGACCGCGGGGTGCTCACCTGTaGGGATGCTCGAGGGCTTCTCCGAGTCCGCACCCA +
Preference number: 6 (lower is better)
Translates to: SRDSGGPRGAHL*GCSRASPSPHP
Trigger: TGGGTGCGGACTCGGAGAAGCCCTCGAGCATCCCCACAGGTGAGCACCCCGCGGTCCGCCGCTGTCCCGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS GCA 72 bp GACAGCGGCGGACCGCGGGGTGCTCACCTGTGGGGATaGTCGAGGGCTTCTCCGAGTCCGCACCCAGACAGG +
Preference number: 6 (lower is better)
Translates to: DSGGPRGAHLWG*SRASPSPHPDR
Trigger: CCTGTCTGGGTGCGGACTCGGAGAAGCCCTCGAGCATCCCCACAGGTGAGCACCCCGCGGTCCGCCGCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494950.5
CDS CCA 72 bp AGATACCAGATGACATTTGGGTTATCAACTTCCCTCTaGGCTCCCCTCCCTCACTGTCGGTCCCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: RYQMTFGLSTSL*APLPHCRSQSA
Trigger: TGCTGACTGGGACCGACAGTGAGGGAGGGGAGCCCAGAGGGAAGTTGATAACCCAAATGTCATCTGGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461497.5
ENST00000478436.1
CDS CCA 72 bp CCCATCACCAAGGTAGTGAGCACAGTACCCATTAGTTaGTTTTTCAACCCTTGTCCCCCTCCCTACTCCCTC +
Preference number: 6 (lower is better)
Translates to: PITKVVSTVPIS*FFNPCPPPYSL
Trigger: GAGGGAGTAGGGAGGGGGACAAGGGTTGAAAAACCAACTAATGGGTACTGTGCTCACTACCTTGGTGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS CAA 90 bp GGGCTCCCCTCCCTCACTGTCGGTCCCAGTCAGCACTTTTTGCTGTaGTCAGTGTGTGTCTCCACACCATATTTGTTCGAAGCAACTATC +
Preference number: 6 (lower is better)
Translates to: GLPSLTVGPSQHFLL*SVCVSTPYLFEATI
Trigger: GATAGTTGCTTCGAACAAATATGGTGTGGAGACACACACTGACAACAGCAAAAAGTGCTGACTGGGACCGACAGTGAGGGAGGGGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS GCA 72 bp GGAAGTCCTTCATGCAAATGTGTGAGTCTCCCAGGATaGATGAAGCTCCAGCCTTTTCGTGGTGACTCAATA +
Preference number: 6 (lower is better)
Translates to: GSPSCKCVSLPG*MKLQPFRGDSI
Trigger: TATTGAGTCACCACGAAAAGGCTGGAGCTTCATGCATCCTGGGAGACTCACACATTTGCATGAAGGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
ENST00000495700.1
CDS CAA 72 bp TCCCTCACTGTCGGTCCCAGTCAGCACTTTTTGCTGTaGTCAGTGTGTGTCTCCACACCATATTTGTTCGAA +
Preference number: 6 (lower is better)
Translates to: SLTVGPSQHFLL*SVCVSTPYLFE
Trigger: TTCGAACAAATATGGTGTGGAGACACACACTGACAACAGCAAAAAGTGCTGACTGGGACCGACAGTGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS GCA 72 bp CTGCAGACAAGTCGACTGTATCGAATTCACAAAGAGTaGAGCCATTATCCTGTGTCCATGAATTGGGTACAT +
Preference number: 6 (lower is better)
Translates to: LQTSRLYRIHKE*SHYPVSMNWVH
Trigger: ATGTACCCAATTCATGGACACAGGATAATGGCTGCACTCTTTGTGAATTCGATACAGTCGACTTGTCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS CCA 72 bp TTTCATCCTGACGGCAAAAGTCCATTCCCATGTTTCTaGCTTCCGCTTGACTTAGATTTTCTTCTGGTCCTA +
Preference number: 6 (lower is better)
Translates to: FHPDGKSPFPCF*LPLDLDFLLVL
Trigger: TAGGACCAGAAGAAAATCTAAGTCAAGCGGAAGCCAGAAACATGGGAATGGACTTTTGCCGTCAGGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000460520.1
ENST00000494950.5
CDS TCA 72 bp TTCAGTGTAACTGGTGCAATGAACTCCCGGATAAAATaGAGCCATACATTCTCCAGATCAACTTGCTTCATG +
Preference number: 6 (lower is better)
Translates to: FSVTGAMNSRIK*SHTFSRSTCFM
Trigger: CATGAAGCAAGTTGATCTGGAGAATGTATGGCTTCATTTTATCCGGGAGTTCATTGCACCAGTTACACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS GCA 72 bp ATTCCCTTGAACAATATCCACATAATCTTCAGATCGTaGATAGTATCCATCAGGACTCAATGCTCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: IPLNNIHIIFRS*IVSIRTQCSPE
Trigger: TTCTGGGGAGCATTGAGTCCTGATGGATACTATGCACGATCTGAAGATTATGTGGATATTGTTCAAGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000478436.1
ENST00000494950.5
CDS GCA 72 bp CGTATAATAGCCTGCAAAGACCTTCAGTGTAACTGGTaGAATGAACTCCCGGATAAAATGAAGCCATACATT +
Preference number: 6 (lower is better)
Translates to: RIIACKDLQCNW*NELPDKMKPYI
Trigger: AATGTATGGCTTCATTTTATCCGGGAGTTCATTGCACCAGTTACACTGAAGGTCTTTGCAGGCTATTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS GCA 72 bp ATATACGGCTATCATGATGTTTTCCCCCAGACCATTTaGCGTAATGTTCCATTTCTTCTACCAATTCATCAC +
Preference number: 6 (lower is better)
Translates to: IYGYHDVFPQTI*RNVPFLLPIHH
Trigger: GTGATGAATTGGTAGAAGAAATGGAACATTACGGCAAATGGTCTGGGGGAAAACATCATGATAGCCGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000461497.5
ENST00000494950.5
CDS TCA 72 bp GAATTCACAAAGAGTGCAGCCATTATCCTGTGTCCATaGATTGGGTACATAGTTTCCAAAATAATTCAGGAG +
Preference number: 6 (lower is better)
Translates to: EFTKSAAIILCP*IGYIVSKIIQE
Trigger: CTCCTGAATTATTTTGGAAACTATGTACCCAATTCATGGACACAGGATAATGGCTGCACTCTTTGTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282903.10
ENST00000360060.7
ENST00000494950.5
CDS CAA 72 bp TTTTTGCTGTTGTCAGTGTGTGTCTCCACACCATATTaGTTCGAAGCAACTATCAAACAAAATACCAGACAG +
Preference number: 6 (lower is better)
Translates to: FLLLSVCVSTPY*FEATIKQNTRQ
Trigger: CTGTCTGGTATTTTGTTTGATAGTTGCTTCGAACAAATATGGTGTGGAGACACACACTGACAACAGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS CAA 90 bp AGATACAGGTTCATGTGTGTTTTTGGTCAAATGACTTACTTTCTTTaGGCTATATACCCAGTAATGGAATTGCTGGGTCAAATGGTAGCT +
Preference number: 6 (lower is better)
Translates to: RYRFMCVFGQMTYFL*AIYPVMELLGQMVA
Trigger: AGCTACCATTTGACCCAGCAATTCCATTACTGGGTATATAGCCAAAAGAAAGTAAGTCATTTGACCAAAAACACACATGAACCTGTATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478436.1
CDS CCA 72 bp TGTATAAATACGTACAAACATAGACACAGTCTAAGTTaGCTACTGCATACGCAAACAAATAGTTTGAGACAC +
Preference number: 6 (lower is better)
Translates to: CINTYKHRHSLS*LLHTQTNSLRH
Trigger: GTGTCTCAAACTATTTGTTTGCGTATGCAGTAGCCAACTTAGACTGTGTCTATGTTTGTACGTATTTATACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478436.1