RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLOD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000083444

Ensembl transcript IDs: ENST00000196061.5, ENST00000358133.5, ENST00000429000.6, ENST00000449038.5, ENST00000465920.1, ENST00000470133.1, ENST00000481933.1, ENST00000485046.5, ENST00000491536.5

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGCTGGACTGGGTTCCCTGGGACCCCGAGGTCCCAGAGGCTGCTaGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTCAGG +
Preference number: 1 (lower is better)
Translates to: EAGLGSLGPRGPRGC*AVVVGKEERSKRVR
Trigger: CCTGACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGACCTCGGGGTCCCAGGGAACCCAGTCCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR GCA 90 bp TCCCAAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTaGTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACTCAGGGC +
Preference number: 1 (lower is better)
Translates to: SQEVLWSRCLQGTTV*SHDQPWRQKSQTQG
Trigger: GCCCTGAGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 90 bp AGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATaGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCC +
Preference number: 1 (lower is better)
Translates to: RSPWCNTCAWEKLWP*LLTQTVFLGNLGKP
Trigger: GGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 90 bp CCTCTCTTCAGAGGCATCCAGGACAGGGTGACCCAGTGTGGTGTGTaGACCTGTCACTCCCCTCCCCACAGGCAAGTAGAAGATCGAGCT +
Preference number: 1 (lower is better)
Translates to: PLFRGIQDRVTQCGV*TCHSPPHRQVEDRA
Trigger: AGCTCGATCTTCTACTTGCCTGTGGGGAGGGGAGTGACAGGTCCACACACCACACTGGGTCACCCTGTCCTGGATGCCTCTGAAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 90 bp AGCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTaGGGAAGCCCCTGTTCTGCTCAAGTCTCACCCCATGGAAGAGGT +
Preference number: 1 (lower is better)
Translates to: SSGHGFSPRQSFWAT*GSPCSAQVSPHGRG
Trigger: ACCTCTTCCATGGGGTGAGACTTGAGCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR TCA 90 bp AGGTGTGTTCCGCCTCTGGCCTGCAGGAATCTCTTTGAATCTCTTTaGTTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: RCVPPLACRNLFESL*LVAPRAMGSQQPGG
Trigger: GCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR GCA 90 bp TCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTaGCTGGGAGAAGCTCTGGCCATGGCTTCTCACCCAGACAGTCTT +
Preference number: 1 (lower is better)
Translates to: SLPQNLKQKSLVQHL*LGEALAMASHPDSL
Trigger: AAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 90 bp TTCCGCCTCTGGCCTGCAGGAATCTCTTTGAATCTCTTTGATTGGTaGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTG +
Preference number: 1 (lower is better)
Translates to: FRLWPAGISLNLFDW*LQEQWEVNSQEAGL
Trigger: CAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 90 bp GTGTTCCGCCTCTGGCCTGCAGGAATCTCTTTGAATCTCTTTGATTaGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGA +
Preference number: 1 (lower is better)
Translates to: VFRLWPAGISLNLFD*WLQEQWEVNSQEAG
Trigger: TCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 90 bp CAGAACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTaGCCTGCAGGAATCTCTTTGAATCTCTTTGATTGGTGGCTCCAA +
Preference number: 1 (lower is better)
Translates to: QNTTESPSHKGVFRL*PAGISLNLFDWWLQ
Trigger: TTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR TCA 90 bp CCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGCAGGAATCTCTTTaGATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACA +
Preference number: 1 (lower is better)
Translates to: PAIKVCSASGLQESL*ISLIGGSKSNGKST
Trigger: TGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp TCCAGAACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGGCCAGGAGGCTGGACTaGGTTCCCTGGGACCCCGAG +
Preference number: 2 (lower is better)
Translates to: SRTPRRAPAIKVCSASGLARRLD*VPWDPE
Trigger: CTCGGGGTCCCAGGGAACCCAGTCCAGCCTCCTGGC...CAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp CAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGGCTTCTGGTCCCAGAGGCTGCTaGGCAGTGGTTGTCGGCAAA +
Preference number: 2 (lower is better)
Translates to: QKSLVQHLCLGEALAMASGPRGC*AVVVGK
Trigger: TTTGCCGACAACCACTGCCCAGCAGCCTCTGGGACC...AGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp TCTGTCTCCCAAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCGCCTGGGAGAAGCTCTaGCCATGGCTTCTCACCCAG +
Preference number: 2 (lower is better)
Translates to: SVSQEVLWSRCLQGTTVCAWEKL*PWLLTQ
Trigger: CTGGGTGAGAAGCCATGGCCAGAGCTTCTCCCAGGC...GCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTTGGGAGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp TTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGTCAAGTCTCACCCCATaGAAGAGGTGGGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: LKQKSLVQHLCLGEALAMSSLTP*KRWGKG
Trigger: CCCCTTCCCCCACCTCTTCCATGGGGTGAGACTTGA...CATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp GCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACAGTCTTTCTaGGCAACTTGGGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: AVSRGLRFALMTSHGGRSPRQSF*ATWGSP
Trigger: GGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGG...ACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp TGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGGAGGCTGCTGGGCAGTaGTTGTCGGCAAAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: WPWLLTQTVFLGNLGKPLEAAGQ*LSAKKK
Trigger: TTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTC...CAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCAACAGCCAGGAGGCTaGACTGGGTTCCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGQQPGG*TGFPGT
Trigger: GGTCCCAGGGAACCCAGTCCAGCCTCCTGGCTGTTG...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp GGCAGCCCTTGGAGTCTGATCCAGGTGTCTTTACCCCAAAACTTGAAGCAGAAGGGTGTCTCCAGGGGCTaGGTCCAGAACACCACGGAG +
Preference number: 2 (lower is better)
Translates to: GSPWSLIQVSLPQNLKQKGVSRG*VQNTTE
Trigger: CTCCGTGGTGTTCTGGACCCAGCCCCTGGAGACACC...CTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGACTCCAAGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CAA 90 bp CAGGGCAGCCCTTGGAGTCTGATCCAGGTGTCTTTACCCCAAAACTaGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: QGSPWSLIQVSLPQN*KQKSLVQHLCLGEA
Trigger: AGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGACTCCAAGGGCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp CAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACTTCTTTCTGGGCAACTTaGGGAAGCCCCTGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: QGTTVCSHDQPWRQKSQTSFWAT*GSPCSA
Trigger: AGCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGA...AGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp TGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGTTCAGGAAGACAGGTTaGAGAGCACGAGTCACTACA +
Preference number: 2 (lower is better)
Translates to: WPWLLTQTVFLGNLGKPLFRKTG*RARVTT
Trigger: TGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAA...CAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CAA 90 bp CCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGCAGGAATCTCTTaGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAAC +
Preference number: 2 (lower is better)
Translates to: PSHKGVFRLWPAGIS*NLFDWWLQEQWEVN
Trigger: GTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp GCCTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAGGTGTGTTCCGCCTCTaGCCTGCAGGAATCTCTTTG +
Preference number: 2 (lower is better)
Translates to: ALVFQEDRLESTSHYKAVGVFRL*PAGISL
Trigger: CAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACC...TACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR TCA 90 bp TACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACCACGCTCTTTGAATCTCTTTaGTTGGTGGCTCCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: YKAVKVNGVSRGWVQNTTLFESL*LVAPRA
Trigger: TGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAG...CGTGGTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CCA 90 bp TCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACAATCTCTTTGATTGGTaGCTCCAAGAGCAATGGGAA +
Preference number: 2 (lower is better)
Translates to: SLQSSKSEWCLQGLGPEHNLFDW*LQEQWE
Trigger: TTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATT...GTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 72 bp GCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTaGACTGGGTTCCCTGGGACCCCGAGGTCCCAGAGG +
Preference number: 3 (lower is better)
Translates to: APRAMGSQQPGG*TGFPGTPRSQR
Trigger: CCTCTGGGACCTCGGGGTCCCAGGGAACCCAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 72 bp AAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTaGGTTCCCTGGGACCCCGAGGTCCCAGAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: KSNGKSTARRLD*VPWDPEVPEAA
Trigger: AGCAGCCTCTGGGACCTCGGGGTCCCAGGGAACCCAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR TCA 72 bp GAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATaGCCAGCCATGGAGGCAGAAGTCCCAGACTCAGGG +
Preference number: 3 (lower is better)
Translates to: ESLSPGDYGLLS*PAMEAEVPDSG
Trigger: CCCTGAGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR GCA 72 bp GTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTaGTCTCATGACCAGCCATGGAGGCAGAAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: VLWSRCLQGTTV*SHDQPWRQKSQ
Trigger: CTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 72 bp AGCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTaGGCAACTTGGGGAAGCCCCTGTTCTGCTCAAGTC +
Preference number: 3 (lower is better)
Translates to: SSGHGFSPRQSF*ATWGSPCSAQV
Trigger: GACTTGAGCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 72 bp TGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATaGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTG +
Preference number: 3 (lower is better)
Translates to: WCNTCAWEKLWP*LLTQTVFLGNL
Trigger: CAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 72 bp CATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTaGGGAAGCCCCTGTTCTGCTCAAGTCTCACCCCAT +
Preference number: 3 (lower is better)
Translates to: HGFSPRQSFWAT*GSPCSAQVSPH
Trigger: ATGGGGTGAGACTTGAGCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CAA 90 bp GAGAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGCTGCTGGGCAGTGGTaGTCGGCAAAGAAGAAAGGT +
Preference number: 3 (lower is better)
Translates to: ESTSHYKAVKVNGVSRGWAAGQW*SAKKKG
Trigger: ACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGC...CCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR-3UTR CAA 90 bp GCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGCAGGAATCTCTTaGAATCTCTTTGATTGGTGG +
Preference number: 3 (lower is better)
Translates to: ALAMASHPDSLSGQLGEAPAGIS*NLFDWW
Trigger: CCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGG...GGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CCA 72 bp ACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTaGCCTGCAGGAATCTCTTTGAATCTCTTTGATTGG +
Preference number: 3 (lower is better)
Translates to: TESPSHKGVFRL*PAGISLNLFDW
Trigger: CCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR TCA 72 bp CCGCCTCTGGCCTGCAGGAATCTCTTTGAATCTCTTTaGTTGGTGGCTCCAAGAGCAATGGGAAGTCAACAG +
Preference number: 3 (lower is better)
Translates to: PPLACRNLFESL*LVAPRAMGSQQ
Trigger: CTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR TCA 72 bp AAGGTGTGTTCCGCCTCTGGCCTGCAGGAATCTCTTTaGATCTCTTTGATTGGTGGCTCCAAGAGCAATGGG +
Preference number: 3 (lower is better)
Translates to: KVCSASGLQESL*ISLIGGSKSNG
Trigger: CCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GTCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGGCAGCAGGGGCCGCATaGCCGAGGTATGGGGGACGA +
Preference number: 4 (lower is better)
Translates to: VPEAAGQWLSAKKKGPRGAAGAA*PRYGGR
Trigger: TCGTCCCCCATACCTCGGCCATGCGGCCCCTGCTGC...CCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTCTGCGATGTAGCGGGTaGCCCTGGTGGTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SQRLLGSGCRQRRKVQEGLRCSG*PWWWGA
Trigger: GGCTCCCCACCACCAGGGGCACCCGCTACATCGCAG...ACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp AACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGCAGGAGCAGAGAAGACCACCTaGCTCCTGGCCTGCCGGAAC +
Preference number: 4 (lower is better)
Translates to: NTTESPSHKGVFRLWPAGAEKTT*LLACRN
Trigger: GTTCCGGCAGGCCAGGAGCCAGGTGGTCTTCTCTGC...TCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCCAGAACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGGTTGGCCCGTTGCCATaGATCAGGACCGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SRTPRRAPAIKVCSASGLVGPLP*IRTGRV
Trigger: CACCCTCCCGGTCCTGATCCATGGCAACGGGCCAAC...CAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGTTGCAGCCGCAGGCTGTTaGGCTCGGTCAGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: AMASHPDSLSGQLGEAPVAAAGC*ARSGPR
Trigger: ACGTGGCCCTGACCGAGCCCAACAGCCTGCGGCTGC...AACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TCTGTCTCCCAAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCGACCACAGCCTCCCATaGCGGGTCATCAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SVSQEVLWSRCLQGTTVCDHSLP*RVISGA
Trigger: TGCCCCGCTGATGACCCGGCATGGGAGGCTGTGGTC...GCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTTGGGAGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATCGCATGGCCGAGGTATaGGGGACGATCGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: FSGVAVSRGLRFALMTSHRMAEV*GTIGRP
Trigger: GGGTCGGCCGATCGTCCCCCATACCTCGGCCATGCG...ATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGGGGTGCCCCTGGTGGTaGGGAGCCCCTCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: WPWLLTQTVFLGNLGKPLGCPWW*GAPHGN
Trigger: ATTACCATGAGGGGCTCCCCACCACCAGGGGCACCC...CAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCTGGACTGGGTTCCCTaGGACCCCGAGGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: EVLWSRCLQGTTVCSHDQLDWVP*DPEVPE
Trigger: CTCTGGGACCTCGGGGTCCCAGGGAACCCAGTCCAG...CTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp CAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGGCTTCTACCTGGCTCCTGGCCTaGCGGAACTTCTTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QKSLVQHLCLGEALAMASTWLLA*RNFFRS
Trigger: GCTCCTGAAGAAGTTCCGGCAGGCCAGGAGCCAGGT...AGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGTCGCTGTCGCTGTCCTaGCCCTCCCACTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: VFTPKLEAEVPGATPVPGSLSLS*PSHSAT
Trigger: GGTGGCCGAGTGGGAGGGCCAGGACAGCGACAGCGA...CCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGGGTGTCTCCAGGGGCTaGGTCCAGAACACCACGGAG +
Preference number: 4 (lower is better)
Translates to: LKQKSLVQHLCLGEALAMGVSRG*VQNTTE
Trigger: CTCCGTGGTGTTCTGGACCCAGCCCCTGGAGACACC...CATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp AACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGCAGGACCCAGACAGTCTTTCTaGGCAACTTGGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: NTTESPSHKGVFRLWPAGPRQSF*ATWGSP
Trigger: GGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGG...TCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp GAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGTGGGGGCATAACCGATaGAGCCTCCAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EVLWSRCLQGTTVCSHDQWGHNR*SLQSPG
Trigger: TCCTGGGCTCTGGAGGCTTCATCGGTTATGCCCCCA...CTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp GGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGGGTTCCCCACAGGCCACCTCCGTaGAGATGGGGAACCAATAGA +
Preference number: 4 (lower is better)
Translates to: GGSKSNGKSTARRLDWVPHRPPP*RWGTNR
Trigger: TCTATTGGTTCCCCATCTTCACGGAGGTGGCCTGTG...GGGAACCCAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp AACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGCAGGATGGTACTCGCTGCCATaGTGTGCCAGGAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: NTTESPSHKGVFRLWPAGWYSLP*CARNSS
Trigger: GGAAGAGTTCCTGGCACAGCATGGCAGCGAGTACCA...TCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCATCGACGAAGGAGACTaGGATGTAGCGGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALAMASHPDSLSGQLGEAIDEGD*DVAGAP
Trigger: AGGGGCACCCGCTACATCGCAGTCTCCTTCGTCGAT...GGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGAGCAGAAGTCCCTGGTaGAACACCTGTGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WPWLLTQTVFLGNLGKPLSRSPW*NTCAWE
Trigger: CTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCT...CAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp CAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGGCTTCTAGACCACCTGGCTCCTaGCCTGCCGGAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QKSLVQHLCLGEALAMASRPPGS*PAGTSS
Trigger: TGAAGAAGTTCCGGCAGGCCAGGAGCCAGGTGGTCT...AGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp CAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACTCTCCAGCCTGCGGTCTaGGTAGATGAGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGTTVCSHDQPWRQKSQTLQPAV*VDELLS
Trigger: GCTGAGGAGCTCATCTACCCAGACCGCAGGCTGGAG...AGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGTTCGTTGTGCAGGTGGGTaGTGCGGTAGCTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: AMASHPDSLSGQLGEAPVRCAGG*CGSCLG
Trigger: CCCTAGACAGCTACCGCACCACCCACCTGCACAACG...AACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTGCCAGGAGGCTGGACTaGGTTCCCTGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGARRLD*VPWDPE
Trigger: CTCGGGGTCCCAGGGAACCCAGTCCAGCCTCCTGGC...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGTTACCCAGTGTGGTGTGTaGACCTGTCACTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AMASHPDSLSGQLGEAPVTQCGV*TCHSPP
Trigger: GGGAGGGGAGTGACAGGTCCACACACCACACTGGGT...AACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp AAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCACTGAGCTGAGCGCTTaGAGCGACGGAATCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KRFSGVAVSRGLRFALMTTELSA*SDGIPR
Trigger: CCGAGGGATTCCGTCGCTTCAAGCGCTCAGCTCAGT...GGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp AAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCGGCCACCAGTTTGCTaGGGTTGGGGGCATAACCGA +
Preference number: 4 (lower is better)
Translates to: KLEAEVPGATPVPGRSSGRPPVC*GWGHNR
Trigger: TCGGTTATGCCCCCAACCTCAGCAAACTGGTGGCCG...GCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCTTCGTCACACACGGTaGAGCCTGTTTCGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ALAMASHPDSLSGQLGEALRHTR*SLFRRS
Trigger: GGACCTTCGAAACAGGCTGCACCGTGTGTGACGAAG...GGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TCTGATCCAGGTGTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACAGTGCAGCTGCGGTCCTaGCGGCACAGGTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: SDPGVFTPKLEAEVPGATVQLRS*RHRSAP
Trigger: GGGCGCAGACCTGTGCCGGCAGGACCGCAGCTGCAC...TGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGAAGAGATCTGAGGACTaGAGCTCACCCCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LKQKSLVQHLCLGEALAMKRSED*SSPRRA
Trigger: TGCCCTGCGGGGTGAGCTGCAGTCCTCAGATCTCTT...CATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp CAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACTGGGAAGCCCCTGTTCTaGTCAAGTCTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: QGTTVCSHDQPWRQKSQTGKPLF*SSLTPW
Trigger: CCATGGGGTGAGACTTGAGCAGAACAGGGGCTTCCC...AGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp CAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGGCTTCTCAGGGGACTACGGTTTaGTCTCATGACCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QKSLVQHLCLGEALAMASQGTTV*SHDQPW
Trigger: CCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTG...AGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GGCAGCCCTTGGAGTCTGATCCAGGTGTCTTTACCCCAAAACTTGAAGCAGAAGGGTTGTCCTCCGGCTTaGCGTCGCCCTTCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GSPWSLIQVSLPQNLKQKGCPPA*RRPSLR
Trigger: CCGAAGCGAAGGGCGACGCCAAGCCGGAGGACAACC...CTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGACTCCAAGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp CAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACTGCTCCATCCAGGTTCTaGAAGATACGGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QGTTVCSHDQPWRQKSQTAPSRF*KIRQRW
Trigger: CCACCGCTGCCGTATCTTCCAGAACCTGGATGGAGC...AGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGTTCTGCGCCCATGTTCCTaGCATCTGCATTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: AMASHPDSLSGQLGEAPVLRPCS*HLHSPS
Trigger: GGATGGCGAATGCAGATGCCAGGAACATGGGCGCAG...AACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTGGTCCAGCCCTTCCTTaGGGCTCGGATGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: AVSRGLRFALMTSHGGRSGPALP*GSDGTV
Trigger: AACTGTTCCATCCGAGCCCCAAGGAAGGGCTGGACC...ACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GTCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGGAGAAGCTCTGGCCATaGCTTCTCACCCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: VPEAAGQWLSAKKKGPRGEKLWP*LLTQTV
Trigger: GACTGTCTGGGTGAGAAGCCATGGCCAGAGCTTCTC...CCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp AACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGCAGGATCTCATGACCAGCCATaGAGGCAGAAGTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: NTTESPSHKGVFRLWPAGSHDQP*RQKSQT
Trigger: AGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGA...TCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGTCCCAAGAGGTTCTCTaGAGTCGCTGTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LKQKSLVQHLCLGEALAMSQEVL*SRCLQG
Trigger: CCCCTGGAGACAGCGACTCCAGAGAACCTCTTGGGA...CATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp CAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGGCTTCTGTTGAAGAACTGAGCTaGGCGCTTGAAGCGACGGAA +
Preference number: 4 (lower is better)
Translates to: QKSLVQHLCLGEALAMASVEELS*ALEATE
Trigger: TTCCGTCGCTTCAAGCGCTCAGCTCAGTTCTTCAAC...AGAAGCCATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp AAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGGAACTCTTCCACCTaGGCCTTGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KRFSGVAVSRGLRFALMTRNSST*ALWCCS
Trigger: CGAGCAGCACCACAAGGCTCAGGTGGAAGAGTTCCT...GGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp AAGCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCGTCAGCATCCACGCTaGAGTAGTAGGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLWPWLLTQTVFLGNLGKRQHPR*SSRCSC
Trigger: GCAGCTGCACCTACTACTTCAGCGTGGATGCTGACG...CTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp CAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACTGGTTGGTCAGGAACATaGACACATCCTGCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: QGTTVCSHDQPWRQKSQTGWSGT*THPAAG
Trigger: TCCGGCAGCAGGATGTGTTCATGTTCCTGACCAACC...AGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATAGCCCAGGAACCTCTTaGCATCGGACACCACCGGAT +
Preference number: 4 (lower is better)
Translates to: FSGVAVSRGLRFALMTSHSPGTS*HRTPPD
Trigger: ATCCGGTGGTGTCCGATGGCAAGAGGTTCCTGGGCT...ATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATCTCGCTGCCATGCTGTaGCAGGAACTCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: FSGVAVSRGLRFALMTSHLAAML*QELFHL
Trigger: CAGGTGGAAGAGTTCCTGGCACAGCATGGCAGCGAG...ATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGTAGTAGGTGCAGCTaGGGTCCTGCCGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: VFTPKLEAEVPGATPVPGSSRCS*GPAGTG
Trigger: ACCTGTGCCGGCAGGACCGCAGCTGCACCTACTACT...CCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TCTGTCTCCCAAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTGTCGGGGTCCAGCTTaGTGTGGTGGAAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: SVSQEVLWSRCLQGTTVCCRGPA*CGGRDL
Trigger: CAGATCTCTTCCACCACAGCAAGCTGGACCCCGACA...GCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTTGGGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TCCAGAACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGATGAACACATCCTGCTaGCGGATGTTGGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: SRTPRRAPAIKVCSASGLMNTSC*RMLAQK
Trigger: CTTCTGTGCCAACATCCGGCAGCAGGATGTGTTCAT...CAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp AAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCTGTGCAGGTGGGTGGTaGGGTAGCTGTCTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KRFSGVAVSRGLRFALMTCAGGW*GSCLGR
Trigger: TCTCCCTAGACAGCTACCGCACCACCCACCTGCACA...GGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCGTAGCCACCCTGGATaGGGTTGTCCTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: AVSRGLRFALMTSHGGRSRSHPG*GCPCCC
Trigger: GCAACAACAAGGACAACCGCATCCAGGGTGGCTACG...ACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCGCCGACCAGGACCGTaGGCAGAGCTTCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGRRPGP*AELHPQ
Trigger: TTGGGGATGAAGCTCTGCCCACGGTCCTGGTCGGCG...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCACCAGCTTCACAGACTaGTACTCGCTGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: ALAMASHPDSLSGQLGEATSFTD*YSLPCC
Trigger: ACAGCATGGCAGCGAGTACCAGTCTGTGAAGCTGGT...GGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCTCCCTGCCAGGGCTTTaGTGTAGTTCTGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: ALAMASHPDSLSGQLGEASLPGL*CSSGGC
Trigger: ACATCCACCAGAACTACACCAAAGCCCTGGCAGGGA...GGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp CAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCCCAGACTCAAGAGGGTCAGGCCTaGCCAATTAGGGATCGACGA +
Preference number: 4 (lower is better)
Translates to: QGTTVCSHDQPWRQKSQTQEGQA*PIRDRR
Trigger: TCGTCGATCCCTAATTGGCCAGGCCTGACCCTCTTG...AGTCTGGGACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGGGTCCCAGAGGCTGCTaGGCAGTGGTTGTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: FDWWLQEQWEVNSQEAGLGPRGC*AVVVGK
Trigger: TTTGCCGACAACCACTGCCCAGCAGCCTCTGGGACC...CAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp GCCTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAGCGTGGGCTGTTCGATaGACACGCCGACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: ALVFQEDRLESTSHYKAVAWAVR*TRRPGP
Trigger: CGGTCCTGGTCGGCGTGTTCATCGAACAGCCCACGC...TACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp TCTGTCTCCCAAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTACGGTTTGCTCTCATaGCCAGCCATGGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SVSQEVLWSRCLQGTTVCYGLLS*PAMEAE
Trigger: TTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTA...GCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTTGGGAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GAGAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGCTTGGTTGGCCCGTTaGCATGGATCAGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: ESTSHYKAVKVNGVSRGWAWLAR*HGSGPG
Trigger: TCCCGGTCCTGATCCATGGCAACGGGCCAACCAAGC...CCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp AAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCAGATGGCCAAGGGTGTaGCGGTTGGTCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: KLEAEVPGATPVPGRSSGRWPRV*RLVRNM
Trigger: CATGTTCCTGACCAACCGGCACACCCTTGGCCATCT...GCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATTCCAGCAGGAATTTGTaGCACTCCCGCTCAAAGCCG +
Preference number: 4 (lower is better)
Translates to: FSGVAVSRGLRFALMTSHSSRNL*HSRSKP
Trigger: CGGCTTTGAGCGGGAGTGGCACAAATTCCTGCTGGA...ATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTAGTTCAACTGCAGCTTaGTTGGCCCGTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: SQRLLGSGCRQRRKVQEGSSTAA*LARCHG
Trigger: TCCATGGCAACGGGCCAACCAAGCTGCAGTTGAACT...ACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGTCCAGCTTGCTGTGGTaGAAGAGATCTGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: EVLWSRCLQGTTVCSHDQSSLLW*KRSEDC
Trigger: GCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGA...CTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACCAACAGCCAGGAGGCTaGACTGGGTTCCCTGGGACC +
Preference number: 4 (lower is better)
Translates to: SLQSSKSEWCLQGLGPEHQQPGG*TGFPGT
Trigger: GGTCCCAGGGAACCCAGTCCAGCCTCCTGGCTGTTG...GTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGGGTTCCCTTCAGGAAGACAGGTTaGAGAGCACGAGTCACTACA +
Preference number: 4 (lower is better)
Translates to: GGSKSNGKSTARRLDWVPFRKTG*RARVTT
Trigger: TGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAA...GGGAACCCAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGTCAAGTCTCACCCCATaGAAGAGGTGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VFTPKLEAEVPGATPVPGSSLTP*KRWGKG
Trigger: CCCCTTCCCCCACCTCTTCCATGGGGTGAGACTTGA...CCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp TCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACCATCCCCAATGCCCTTaGGGCTGCGCAAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: SLQSSKSEWCLQGLGPEHHPQCP*GCASLR
Trigger: ACGAAGGCTTGCGCAGCCTCAAGGGCATTGGGGATG...GTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTCAGATCCTCCTTGTCTaGGTGCTTCTCCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: AVSRGLRFALMTSHGGRSQILLV*VLLQSF
Trigger: AAAGCTCTGGAGAAGCACGCAGACAAGGAGGATCTG...ACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp AAGCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGAGCGCGGGATGTAGTTaGCCAGGTAGTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: KLWPWLLTQTVFLGNLGKSAGCS*PGSSTA
Trigger: TGCAGTTGAACTACCTGGGCAACTACATCCCGCGCT...CTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp AAGCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGGGTTGTCCTTGTTGTTaGCCAGAGACCACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KLWPWLLTQTVFLGNLGKGCPCC*PETTGQ
Trigger: TTGGCCAGTGGTCTCTGGGCAACAACAAGGACAACC...CTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACCACGACACCACCGGATACTTaGTCTCCAGCCTGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: YKAVKVNGVSRGWVQNTTTPPDT*SPACGL
Trigger: CAGACCGCAGGCTGGAGACCAAGTATCCGGTGGTGT...CGTGGTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp AAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCACGTTCTTGTTCTGTTaGATCAGCAGCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KLEAEVPGATPVPGRSSGTFLFC*ISSRRL
Trigger: CAGCCTGCGGCTGCTGATCCAACAGAACAAGAACGT...GCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTGGTCAAACTGGGCCCTaGTGTAGTAGCCGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGGQTGP*CSSRGR
Trigger: TCTACCCCGGCTACTACACCAGGGCCCAGTTTGACC...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACGCCTGGGAGAAGCTCTaGCCATGGCTTCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLQSSKSEWCLQGLGPEHAWEKL*PWLLTQ
Trigger: CTGGGTGAGAAGCCATGGCCAGAGCTTCTCCCAGGC...GTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp AAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCTGTCTGCGAAGAGAATaGCCAGATCCTCCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KRFSGVAVSRGLRFALMTCLRRE*PDPPCL
Trigger: CAGACAAGGAGGATCTGGTCATTCTCTTCGCAGACA...GGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp GAGAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGTGCGGTCTGGGTAGATaGGCTCCTCAGCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ESTSHYKAVKVNGVSRGWCGLGR*APQQRR
Trigger: TCTTCTCTGCTGAGGAGCTCATCTACCCAGACCGCA...CCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp GAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGGCTCGTGGTTGTGGATaGAAAGTCGCATGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: EVLWSRCLQGTTVCSHDQARGCG*KVACVS
Trigger: AGAAACACATGCGACTTTTCATCCACAACCACGAGC...CTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp TACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACCACGATGGTGTGGCATCAGTaGGGGCTGCTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YKAVKVNGVSRGWVQNTTMVWHQ*GLLIRL
Trigger: AAGCCTGATGAGCAGCCCTCACTGATGCCACACCAT...CGTGGTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp GCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCTGCAGGAATCTCTTTaGATCTCTTTGATTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ALAMASHPDSLSGQLGEALQESL*ISLIGG
Trigger: GCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAG...GGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TCTGATCCAGGTGTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACTCCCGGGGCCCCGATaGAAACAGCACGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: SDPGVFTPKLEAEVPGATLPGPR*KQHVIA
Trigger: AGCTATGACGTGCTGTTTGCATCGGGGCCCCGGGAG...TGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCATGTTCCTGGCATCTaGATTCGCCATCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGHVPGI*IRHPHL
Trigger: GAGGTGCGGATGGCGAATGCAGATGCCAGGAACATG...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGGGTCCAAGAAGATCTTaGTGTAAAACAGCTGATCGC +
Preference number: 4 (lower is better)
Translates to: WPWLLTQTVFLGNLGKPLGPRRS*CKTADR
Trigger: GCGATCAGCTGTTTTACACCAAGATCTTCTTGGACC...CAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGGGTCCAGCTTGCTGTaGTGGAAGAGATCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ESTSHYKAVKVNGVSRGWGSSLL*WKRSED
Trigger: GTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCC...CCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTTTGCCCAGAGACCACTaGCCAAAGTGCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGLPRDH*PKCSIS
Trigger: GGAGATGGAGCACTTTGGCCAGTGGTCTCTGGGCAA...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACCACGTCCTTGGGGCTCGGATaGAACAGTTGTAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: YKAVKVNGVSRGWVQNTTSLGLG*NSCSAG
Trigger: TCCTGCGCTACAACTGTTCCATCCGAGCCCCAAGGA...CGTGGTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CAA 72 bp CCTTGGAGTCTGATCCAGGTGTCTTTACCCCAAAACTaGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PWSLIQVSLPQN*KQKSLVQHLCL
Trigger: CAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGACTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp TCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGAGTCCTCGGGGTTGCTaGACACCTCCCAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SLNLFDWWLQEQWEVNSQSPRGC*TPPRGR
Trigger: ACGACCTCTGGGAGGTGTTCAGCAACCCCGAGGACT...CTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp TTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGTCCTCCTTGTCTGCGTaGTTCTCCAGAGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FDWWLQEQWEVNSQEAGLSSLSA*FSRAFF
Trigger: GAAGAAAGCTCTGGAGAAGCACGCAGACAAGGAGGA...CAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATTTCCTCGCTCTCACATaGCCCATTTCAAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: FSGVAVSRGLRFALMTSHFLALT*PISNLS
Trigger: GCTCAAGTTTGAAATGGGCCATGTGAGAGCGAGGAA...ATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTCGCTCAAAGCCGATCTaGTTCATGTGGATGTCAATA +
Preference number: 4 (lower is better)
Translates to: SQRLLGSGCRQRRKVQEGRSKPI*FMWMSI
Trigger: TATTGACATCCACATGAACCAGATCGGCTTTGAGCG...ACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACGGTGTGTTCCGCCTCTaGCCTGCAGGAATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLQSSKSEWCLQGLGPEHGVFRL*PAGISL
Trigger: CAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACC...GTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACCACGTCTTTCTGGGCAACTTaGGGAAGCCCCTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YKAVKVNGVSRGWVQNTTSFWAT*GSPCSA
Trigger: AGCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGA...CGTGGTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCTGATCCAGGTGTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACAGGGTGACCCAGTGTaGTGTGTGGACCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: SDPGVFTPKLEAEVPGATQGDPV*CVDLSL
Trigger: GAGTGACAGGTCCACACACCACACTGGGTCACCCTG...TGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp TCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGCAGCCCTTGGAGTCTaGTCCAGGTGTCTTTACCCC +
Preference number: 4 (lower is better)
Translates to: SLNLFDWWLQEQWEVNSQAALGV*SRCLYP
Trigger: GGGGTAAAGACACCTGGATCAGACTCCAAGGGCTGC...CTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTGTTCCGCCTCTGGCCTaGAGGAATCTCTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGVPPLA*RNLFES
Trigger: AGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAAC...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp ATCTCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCTGGTGCAACACCTGTaGCTGGGAGAAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ISLNLFDWWLQEQWEVNSLVQHL*LGEALA
Trigger: GGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAG...GCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTAAGATACGGCAGCGGTaGTCCAGGGTGATATTGATC +
Preference number: 4 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGKIRQR*SRVILI
Trigger: GATCAATATCACCCTGGACCACCGCTGCCGTATCTT...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GGAATCTCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACCCTGCTGCCGGATGTTaGCACAGAAGGCCATGTCGG +
Preference number: 4 (lower is better)
Translates to: GISLNLFDWWLQEQWEVNPAAGC*HRRPCR
Trigger: CCGACATGGCCTTCTGTGCCAACATCCGGCAGCAGG...GTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTTTGAATCTCTTTGATTaGTGGCTCCAAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: SQRLLGSGCRQRRKVQEGLNLFD*WLQEQW
Trigger: CCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAA...ACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GCCTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAACTCAGGGCAGCCCTTaGAGTCTGATCCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: ALVFQEDRLESTSHYKAVTQGSP*SLIQVS
Trigger: AGACACCTGGATCAGACTCCAAGGGCTGCCCTGAGT...TACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp TTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGCTCTTTGAATCTCTTTaGTTGGTGGCTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FDWWLQEQWEVNSQEAGLLFESL*LVAPRA
Trigger: TGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAG...CAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GAGAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGTGCTGCTCGTGGTTGTaGATGAAAAGTCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: ESTSHYKAVKVNGVSRGWCCSWL*MKSRMC
Trigger: ACACATGCGACTTTTCATCCACAACCACGAGCAGCA...CCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp AAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAATCTCTTTGATTGGTaGCTCCAAGAGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: KRFSGVAVSRGLRFALMTNLFDW*LQEQWE
Trigger: TTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATT...GGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
3UTR CAA 72 bp AAAGGTGTGTTCCGCCTCTGGCCTGCAGGAATCTCTTaGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: KGVFRLWPAGIS*NLFDWWLQEQW
Trigger: CCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGGCCAGAGGCGGAACACACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp ATCTCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAACTGCAGCTTGGTTaGCCCGTTGCCATGGATCAG +
Preference number: 4 (lower is better)
Translates to: ISLNLFDWWLQEQWEVNSQLQLG*PVAMDQ
Trigger: CTGATCCATGGCAACGGGCCAACCAAGCTGCAGTTG...GCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCTGATCCAGGTGTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACCGATCTGGTTCATGTaGATGTCAATAGTCGGCACG +
Preference number: 4 (lower is better)
Translates to: SDPGVFTPKLEAEVPGATPIWFM*MSIVGT
Trigger: CGTGCCGACTATTGACATCCACATGAACCAGATCGG...TGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp TCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGAGAGCTTCTCCGTCATaGGCGCAATGTACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLNLFDWWLQEQWEVNSQRASPS*AQCTPA
Trigger: TGCTGGAGTACATTGCGCCCATGACGGAGAAGCTCT...CTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp CTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAAAAAGGTGGAGGCATCATaGTGTGGCATCAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LGFSGRQVGEHESLQSSKKVEAS*CGISEG
Trigger: GCCCTCACTGATGCCACACCATGATGCCTCCACCTT...TTTACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp ATCTCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCGGCCCATTTCAAACTTaGGCACGACCTCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: ISLNLFDWWLQEQWEVNSGPFQT*ARPHPR
Trigger: CCTTGGATGAGGTCGTGCTCAAGTTTGAAATGGGCC...GCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp AAGCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGGATCAAGTAGATGTTTaGAATATAGGGCACATTCCA +
Preference number: 4 (lower is better)
Translates to: KLWPWLLTQTVFLGNLGKDQVDV*NIGHIP
Trigger: TGGAATGTGCCCTATATTTCAAACATCTACTTGATC...CTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp TCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGCTTTACCCCAAAACTTaGAGCAGAAGTCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLNLFDWWLQEQWEVNSQLYPKT*SRSPWC
Trigger: GCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAG...CTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp GGAATCTCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACGAGGCTGCTGGGCAGTaGTTGTCGGCAAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GISLNLFDWWLQEQWEVNEAAGQ*LSAKKK
Trigger: TTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTC...GTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp CTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAAAAAACTCTCCAGTTTCTaGCGGTCTGTCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LGFSGRQVGEHESLQSSKKLSSF*RSVPLF
Trigger: GAAGAGAGGGACAGACCGTCAGAAACTGGAGAGTTT...TTTACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CCA 90 bp CTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAAATTGTGGTGCTGCTCGTaGTTGTGGATGAAAAGTCGC +
Preference number: 4 (lower is better)
Translates to: LGFSGRQVGEHESLQSSKLWCCS*LWMKSR
Trigger: GCGACTTTTCATCCACAACCACGAGCAGCACCACAA...TTTACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR TCA 90 bp ATCTCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCGCAGGGCACTGCCCTTaGTCAAGTAGATGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ISLNLFDWWLQEQWEVNSAGHCP*SSRCLK
Trigger: TTTCAAACATCTACTTGATCAAGGGCAGTGCCCTGC...GCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR GCA 90 bp CTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAAACACGTCATAGCTGTCTaGGAAGAGAATGACCAGATC +
Preference number: 4 (lower is better)
Translates to: LGFSGRQVGEHESLQSSKHVIAV*EENDQI
Trigger: GATCTGGTCATTCTCTTCGCAGACAGCTATGACGTG...TTTACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp CCAGCAGCAGCCAGCCCAGCAGGGCCAGTAGCAGCAGGGGCCGCATaGCCGAGGTATGGGGGACGATCGGCCGACCCGGCGGCGCTCGCA +
Preference number: 5 (lower is better)
Translates to: PAAASPAGPVAAGAA*PRYGGRSADPAALA
Trigger: TGCGAGCGCCGCCGGGTCGGCCGATCGTCCCCCATACCTCGGCCATGCGGCCCCTGCTGCTACTGGCCCTGCTGGGCTGGCTGCTGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000449038.5
CDS CCA 90 bp CAGCCCAGCAGGGCCAGTAGCAGCAGGGGCCGCATGGCCGAGGTATaGGGGACGATCGGCCGACCCGGCGGCGCTCGCAGGGCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: QPSRASSSRGRMAEV*GTIGRPGGARRAGN
Trigger: GTTTCCAGCCCTGCGAGCGCCGCCGGGTCGGCCGATCGTCCCCCATACCTCGGCCATGCGGCCCCTGCTGCTACTGGCCCTGCTGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000449038.5
CDS TCA 90 bp GCCGCAGGCTGTTGGGCTCGGTCAGGGCCACGTCAGCATCCACGCTaGAGTAGTAGGTGCAGCTGCGGTCCTGCCGGCACAGGTCTGCGC +
Preference number: 5 (lower is better)
Translates to: AAGCWARSGPRQHPR*SSRCSCGPAGTGLR
Trigger: GCGCAGACCTGTGCCGGCAGGACCGCAGCTGCACCTACTACTTCAGCGTGGATGCTGACGTGGCCCTGACCGAGCCCAACAGCCTGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 90 bp GGGCTCCCCCGAGCTCCTGCCAGGACGGTGAAGTCTCTCCCCAGGTaGAGAGAACCAGAGCCACCAGCTCTGAGGCCCTCTTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: GLPRAPARTVKSLPR*REPEPPALRPSWQQ
Trigger: CTGTTGCCAAGAGGGCCTCAGAGCTGGTGGCTCTGGTTCTCTTCACCTGGGGAGAGACTTCACCGTCCTGGCAGGAGCTCGGGGGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449038.5
CDS CCA 90 bp TCACTATTGGAAGAAGGCTGCTTCGGACGAAGCAGGGCCCAGGCGTaGGGCACAGGCTTGTGGCTAGGGAGGGAGTGGGCACGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SLLEEGCFGRSRAQA*GTGLWLGREWARWP
Trigger: TGGCCAGCGTGCCCACTCCCTCCCTAGCCACAAGCCTGTGCCCCACGCCTGGGCCCTGCTTCGTCCGAAGCAGCCTTCTTCCAATAGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS GCA 90 bp CCTGCTGCCGGATGTTGGCACAGAAGGCCATGTCGGGGTCCAGCTTaGTGTGGTGGAAGAGATCTGAGGACTGCAGCTCACCCCGCAGGG +
Preference number: 5 (lower is better)
Translates to: PAAGCWHRRPCRGPA*CGGRDLRTAAHPAG
Trigger: CCCTGCGGGGTGAGCTGCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGCCAACATCCGGCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000491536.5
CDS CCA 90 bp CGGATGTTGGCACAGAAGGCCATGTCGGGGTCCAGCTTGCTGTGGTaGAAGAGATCTGAGGACTGCAGCTCACCCCGCAGGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: RMLAQKAMSGSSLLW*KRSEDCSSPRRALP
Trigger: GGGCAGTGCCCTGCGGGGTGAGCTGCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGCCAACATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000491536.5
CDS-3UTR CAA 90 bp GGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGGGTTCCCACCTCCCAGAGGTCGTaGTGCAGGTGGGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: GGSKSNGKSTARRLDWVPTSQRS*CRWVVR
Trigger: CCGCACCACCCACCTGCACAACGACCTCTGGGAGGT...GGGAACCCAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 90 bp GGAGCCGCTGGAAGAACAGGGACACAAACGGCGTGGGCTGTTCGATaGACACGCCGACCAGGACCGTGGGCAGAGCTTCATCCCCAATGC +
Preference number: 5 (lower is better)
Translates to: GAAGRTGTQTAWAVR*TRRPGPWAELHPQC
Trigger: GCATTGGGGATGAAGCTCTGCCCACGGTCCTGGTCGGCGTGTTCATCGAACAGCCCACGCCGTTTGTGTCCCTGTTCTTCCAGCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000485046.5
CDS CCA 90 bp TGCCGGATGTTGGCACAGAAGGCCATGTCGGGGTCCAGCTTGCTGTaGTGGAAGAGATCTGAGGACTGCAGCTCACCCCGCAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: CRMLAQKAMSGSSLL*WKRSEDCSSPRRAL
Trigger: CAGTGCCCTGCGGGGTGAGCTGCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGCCAACATCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000491536.5
CDS CCA 90 bp CAAGCAGTTTCCCTTCTGTGCCCTGCCCCCTGCAGCAGGCAAGGCTaGTCCAAGAGGGTGTCCATGGCCCTTACCGTCTCCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QAVSLLCPAPCSRQG*SKRVSMALTVSTSF
Trigger: GAAGCTGGTGGAGACGGTAAGGGCCATGGACACCCTCTTGGACCAGCCTTGCCTGCTGCAGGGGGCAGGGCACAGAAGGGAAACTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470133.1
CDS-3UTR CAA 90 bp GGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGGGTTCCCAGCTTGGTTGGCCCGTaGCCATGGATCAGGACCGGG +
Preference number: 5 (lower is better)
Translates to: GGSKSNGKSTARRLDWVPSLVGP*PWIRTG
Trigger: CCCGGTCCTGATCCATGGCAACGGGCCAACCAAGCT...GGGAACCCAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp AAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCAGCCGCAGGCTGTaGGGCTCGGTCAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: KRFSGVAVSRGLRFALMTSSRRL*GSVRAT
Trigger: CGTGGCCCTGACCGAGCCCAACAGCCTGCGGCTGCT...GGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 90 bp CCATCCGCACCTCAGGGCCCACCAGCTTCACAGACTGGTACTCGCTaGCATGCTGTGCCAGGAACTCTTCCACCTGAGCCTTGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: PSAPQGPPASQTGTR*HAVPGTLPPEPCGA
Trigger: AGCACCACAAGGCTCAGGTGGAAGAGTTCCTGGCACAGCATGGCAGCGAGTACCAGTCTGTGAAGCTGGTGGGCCCTGAGGTGCGGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp CTTGCCATCGGACACCACCGGATACTTGGTCTCCAGCCTGCGGTCTaGGTAGATGAGCTCCTCAGCAGAGAAGACCACCTGGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LAIGHHRILGLQPAV*VDELLSREDHLAPG
Trigger: GCCAGGAGCCAGGTGGTCTTCTCTGCTGAGGAGCTCATCTACCCAGACCGCAGGCTGGAGACCAAGTATCCGGTGGTGTCCGATGGCAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
ENST00000485046.5
CDS CCA 90 bp AAGGAGGACACAAAGGCCAGGAGAGGAGGGTGCACACATGGGGCCTaGTCTGGCCTGCTGCAGGTCAGCTTACAGGGGCCAGGTCTACAT +
Preference number: 5 (lower is better)
Translates to: KEDTKARRGGCTHGA*SGLLQVSLQGPGLH
Trigger: ATGTAGACCTGGCCCCTGTAAGCTGACCTGCAGCAGGCCAGACCAGGCCCCATGTGTGCACCCTCCTCTCCTGGCCTTTGTGTCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS-3UTR CAA 90 bp AACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGCAGGAGACACCACCGGATACTaGGTCTCCAGCCTGCGGTCT +
Preference number: 5 (lower is better)
Translates to: NTTESPSHKGVFRLWPAGDTTGY*VSSLRS
Trigger: AGACCGCAGGCTGGAGACCAAGTATCCGGTGGTGTC...TCCTGCAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp GGTGGCTCCAAGAGCAATGGGAAGTCAACAGCCAGGAGGCTGGACTGGGTTCCCTCCTGCTGCCGGATGTaGGCACAGAAGGCCATGTCG +
Preference number: 5 (lower is better)
Translates to: GGSKSNGKSTARRLDWVPSCCRM*AQKAMS
Trigger: CGACATGGCCTTCTGTGCCAACATCCGGCAGCAGGA...GGGAACCCAGTCCAGCCTCCTGGCTGTTGACTTCCCATTGCTCTTGGAGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp TCCAGAACACCACGGAGAGCCCCAGCCATAAAGGTGTGTTCCGCCTCTGGCCTGGACTCAGGGCAGCCCTaGGAGTCTGATCCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: SRTPRRAPAIKVCSASGLDSGQP*ESDPGV
Trigger: GACACCTGGATCAGACTCCAAGGGCTGCCCTGAGTC...CAGGCCAGAGGCGGAACACACCTTTATGGCTGGGGCTCTCCGTGGTGTTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 90 bp CTCAGGGCCCACCAGCTTCACAGACTGGTACTCGCTGCCATGCTGTaGCAGGAACTCTTCCACCTGAGCCTTGTGGTGCTGCTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: LRAHQLHRLVLAAML*QELFHLSLVVLLVV
Trigger: AACCACGAGCAGCACCACAAGGCTCAGGTGGAAGAGTTCCTGGCACAGCATGGCAGCGAGTACCAGTCTGTGAAGCTGGTGGGCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp CTGGTCTGGCCTGCTGCAGGTCAGCTTACAGGGGCCAGGTCTACATaGGGCTCTATGCTCGAGTGCCTGCAACTACCTGGCACAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LVWPAAGQLTGARST*GSMLECLQLPGTEK
Trigger: CTTTTCTGTGCCAGGTAGTTGCAGGCACTCGAGCATAGAGCCCCATGTAGACCTGGCCCCTGTAAGCTGACCTGCAGCAGGCCAGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS-3UTR CAA 90 bp AAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCGAGCCCAGGAACCTCTaGCCATCGGACACCACCGGA +
Preference number: 5 (lower is better)
Translates to: KLEAEVPGATPVPGRSSGEPRNL*PSDTTG
Trigger: TCCGGTGGTGTCCGATGGCAAGAGGTTCCTGGGCTC...GCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp TCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTTTCCAGTCCTCGGGGTaGCTGAACACCTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SQRLLGSGCRQRRKVQEGFQSSG*LNTSQR
Trigger: CCTCTGGGAGGTGTTCAGCAACCCCGAGGACTGGAA...ACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp TTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGGTCCAGCCCTTCCTaGGGGCTCGGATGGAACAGT +
Preference number: 5 (lower is better)
Translates to: FSGVAVSRGLRFALMTSHGSSPS*GLGWNS
Trigger: ACTGTTCCATCCGAGCCCCAAGGAAGGGCTGGACCC...ATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 90 bp CCAATCCTCACAACCCTTTCTGGCAACTATCCAGGCTGGATTCCCTaGGGCAGGACCCAGGCACGCCATGGGCAGGTATCTGGAGAAACC +
Preference number: 5 (lower is better)
Translates to: PILTTLSGNYPGWIP*GRTQARHGQVSGET
Trigger: GGTTTCTCCAGATACCTGCCCATGGCGTGCCTGGGTCCTGCCTCAGGGAATCCAGCCTGGATAGTTGCCAGAAAGGGTTGTGAGGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS GCA 90 bp ACACGGTGCAGCCTGTTTCGAAGGTCCAGAAGCGCGGGATGTAGTTaGCCAGGTAGTTCAACTGCAGCTTGGTTGGCCCGTTGCCATGGA +
Preference number: 5 (lower is better)
Translates to: TRCSLFRRSRSAGCS*PGSSTAAWLARCHG
Trigger: TCCATGGCAACGGGCCAACCAAGCTGCAGTTGAACTACCTGGGCAACTACATCCCGCGCTTCTGGACCTTCGAAACAGGCTGCACCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000465920.1
ENST00000485046.5
CDS GCA 90 bp GTCAGTAACAGGAGTTCAGGGTTTTCCTCACTATTGGAAGAAGGCTaGTTCGGACGAAGCAGGGCCCAGGCGTGGGGCACAGGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VSNRSSGFSSLLEEG*FGRSRAQAWGTGLW
Trigger: CCACAAGCCTGTGCCCCACGCCTGGGCCCTGCTTCGTCCGAAGCAGCCTTCTTCCAATAGTGAGGAAAACCCTGAACTCCTGTTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CCA 90 bp CAAACTGGGCCCTGGTGTAGTAGCCGGGGTAGAGCTTCTCCGTCATaGGCGCAATGTACTCCAGCAGGAATTTGTGCCACTCCCGCTCAA +
Preference number: 5 (lower is better)
Translates to: QTGPWCSSRGRASPS*AQCTPAGICATPAQ
Trigger: TTGAGCGGGAGTGGCACAAATTCCTGCTGGAGTACATTGCGCCCATGACGGAGAAGCTCTACCCCGGCTACTACACCAGGGCCCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp GGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTCAGGCCTaGCCAATTAGGGATCGACGAAGGAGACTGCGATGTAGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: GSGCRQRRKVQEGQA*PIRDRRRRLRCSGC
Trigger: GCACCCGCTACATCGCAGTCTCCTTCGTCGATCCCTAATTGGCCAGGCCTGACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000481933.1
CDS CCA 90 bp GGAGACACCAAGGCTCCATCCAGGTTCTGGAAGATACGGCAGCGGTaGTCCAGGGTGATATTGATCTGCTCCCTCTTCTCCGGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: GDTKAPSRFWKIRQR*SRVILICSLFSGSK
Trigger: CTTGGACCCGGAGAAGAGGGAGCAGATCAATATCACCCTGGACCACCGCTGCCGTATCTTCCAGAACCTGGATGGAGCCTTGGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429000.6
CDS-3UTR CAA 90 bp TGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGATGCGGTTGTCCTTGTaGTTGCCCAGAGACCACTGG +
Preference number: 5 (lower is better)
Translates to: WPWLLTQTVFLGNLGKPLMRLSL*LPRDHW
Trigger: CCAGTGGTCTCTGGGCAACAACAAGGACAACCGCAT...CAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp TTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGCCACCCTGGATGCGGTaGTCCTTGTTGTTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LKQKSLVQHLCLGEALAMPPWMR*SLLLPR
Trigger: TCTGGGCAACAACAAGGACAACCGCATCCAGGGTGG...CATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 90 bp CTGCAGCTCACCCCGCAGGGCACTGCCCTTGATCAAGTAGATGTTTaGAATATAGGGCACATTCCAGACACCAACACGCCGCCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LQLTPQGTALDQVDV*NIGHIPDTNTPPLH
Trigger: GTGCAGGGGCGGCGTGTTGGTGTCTGGAATGTGCCCTATATTTCAAACATCTACTTGATCAAGGGCAGTGCCCTGCGGGGTGAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp AAGAATGCAGCCGGCTCACCCTCTTCTCCGGGTCCAAGAAGATCTTaGTGTAAAACAGCTGATCGCTGTCGCTGTCCTGGCCCTCCCACT +
Preference number: 5 (lower is better)
Translates to: KNAAGSPSSPGPRRS*CKTADRCRCPGPPT
Trigger: AGTGGGAGGGCCAGGACAGCGACAGCGATCAGCTGTTTTACACCAAGATCTTCTTGGACCCGGAGAAGAGGGTGAGCCGGCTGCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358133.5
CDS-3UTR CAA 90 bp TCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTCCAGAACACAGGTTGTCCTCCGGCTaGGCGTCGCCCTTCGCTTCG +
Preference number: 5 (lower is better)
Translates to: SLQSSKSEWCLQGLGPEHRLSSG*ASPFAS
Trigger: CGAAGCGAAGGGCGACGCCAAGCCGGAGGACAACCT...GTGTTCTGGACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp GCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATGGAGGCAGAAGTTGGATGCGGTTGTCCTaGTTGTTGCCCAGAGACCAC +
Preference number: 5 (lower is better)
Translates to: AVSRGLRFALMTSHGGRSWMRLS*LLPRDH
Trigger: GTGGTCTCTGGGCAACAACAAGGACAACCGCATCCA...ACTTCTGCCTCCATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp AAGCTCTGGCCATGGCTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCGGTTCAGGGCGATGTaGATGGTGAAGGTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: KLWPWLLTQTVFLGNLGKRFRAM*MVKVEA
Trigger: TGCCTCCACCTTCACCATCAACATCGCCCTGAACCG...CTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAGCCATGGCCAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp TTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGAGAAGCTCTGGCCATGGCTGCTGGGCAGTGGTaGTCGGCAAAGAAGAAAGGT +
Preference number: 5 (lower is better)
Translates to: LKQKSLVQHLCLGEALAMAAGQW*SAKKKG
Trigger: ACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGC...CATGGCCAGAGCTTCTCCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp TTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGCCATGTCTTTCTGGGCAACTaGGGGAAGCCCCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: FSGVAVSRGLRFALMTSHVFLGN*GKPLFC
Trigger: GCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGAC...ATGGCTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 90 bp CACGTCATAGCTGTCTGCGAAGAGAATGACCAGATCCTCCTTGTCTaGGTGCTTCTCCAGAGCTTTCTTCAGCAGCCGGACCTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: HVIAVCEENDQILLV*VLLQSFLQQPDLLP
Trigger: GGGCAGAAGGTCCGGCTGCTGAAGAAAGCTCTGGAGAAGCACGCAGACAAGGAGGATCTGGTCATTCTCTTCGCAGACAGCTATGACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
ENST00000485046.5
CDS-3UTR CAA 90 bp TCCCAGAGGCTGCTGGGCAGTGGTTGTCGGCAAAGAAGAAAGGTCCAAGAGGGTTGGTCCAGGGTGATATaGATCTGCTCCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SQRLLGSGCRQRRKVQEGWSRVI*ICSLFS
Trigger: GGAGAAGAGGGAGCAGATCAATATCACCCTGGACCA...ACCCTCTTGGACCTTTCTTCTTTGCCGACAACCACTGCCCAGCAGCCTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp CTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGTTCTGCTCAGACGTTCTTGTTCTGTaGGATCAGCAGCCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LLTQTVFLGNLGKPLFCSDVLVL*DQQPQA
Trigger: AGCCTGCGGCTGCTGATCCAACAGAACAAGAACGTC...TGAGCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp AAGAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCATGTCGGGGTCCAGCTaGCTGTGGTGGAAGAGATCT +
Preference number: 5 (lower is better)
Translates to: KRFSGVAVSRGLRFALMTMSGSS*LWWKRS
Trigger: AGATCTCTTCCACCACAGCAAGCTGGACCCCGACAT...GGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp GTCTTTACCCCAAAACTTGAAGCAGAAGTCCCTGGTGCAACACCTGTGCCTGGGCGGTTGTCCTTGTTGTaGCCCAGAGACCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: VFTPKLEAEVPGATPVPGRLSLL*PRDHWP
Trigger: TGGCCAGTGGTCTCTGGGCAACAACAAGGACAACCG...CCCAGGCACAGGTGTTGCACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp GAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGTACTCCAGCAGGAATTaGTGCCACTCCCGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: EVLWSRCLQGTTVCSHDQYSSRN*CHSRSK
Trigger: CTTTGAGCGGGAGTGGCACAAATTCCTGCTGGAGTA...CTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp CTTCTCACCCAGACAGTCTTTCTGGGCAACTTGGGGAAGCCCCTGTTCTGCTCAGGGGCAATGACGTTCTaGTTCTGTTGGATCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLTQTVFLGNLGKPLFCSGAMTF*FCWISS
Trigger: GCTGCTGATCCAACAGAACAAGAACGTCATTGCCCC...TGAGCAGAACAGGGGCTTCCCCAAGTTGCCCAGAAAGACTGTCTGGGTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp GAGGTTCTCTGGAGTCGCTGTCTCCAGGGGACTACGGTTTGCTCTCATGACCAGTTTCAGGAAGACAGGTaGGAGAGCACGAGTCACTAC +
Preference number: 5 (lower is better)
Translates to: EVLWSRCLQGTTVCSHDQFQEDR*ESTSHY
Trigger: GTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAA...CTGGTCATGAGAGCAAACCGTAGTCCCCTGGAGACAGCGACTCCAGAGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp CTACAGTCTAGTGGCTCTACTCACAGAAAACCAGGGACTCTGAACTaGAAGGAATCTAAGAATGCAGCCGGCTCACCCTCTTCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: LQSSGSTHRKPGTLN*KESKNAAGSPSSPG
Trigger: ACCCGGAGAAGAGGGTGAGCCGGCTGCATTCTTAGATTCCTTCCAGTTCAGAGTCCCTGGTTTTCTGTGAGTAGAGCCACTAGACTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358133.5
CDS-3UTR CAA 90 bp GGCAGCCCTTGGAGTCTGATCCAGGTGTCTTTACCCCAAAACTTGAAGCAGAAGTGGTGCTGCTCGTGGTaGTGGATGAAAAGTCGCATG +
Preference number: 5 (lower is better)
Translates to: GSPWSLIQVSLPQNLKQKWCCSW*WMKSRM
Trigger: CATGCGACTTTTCATCCACAACCACGAGCAGCACCA...CTTCTGCTTCAAGTTTTGGGGTAAAGACACCTGGATCAGACTCCAAGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 90 bp GGAAGAGATCTGAGGACTGCAGCTCACCCCGCAGGGCACTGCCCTTaGTCAAGTAGATGTTTGAAATATAGGGCACATTCCAGACACCAA +
Preference number: 5 (lower is better)
Translates to: GRDLRTAAHPAGHCP*SSRCLKYRAHSRHQ
Trigger: TTGGTGTCTGGAATGTGCCCTATATTTCAAACATCTACTTGATCAAGGGCAGTGCCCTGCGGGGTGAGCTGCAGTCCTCAGATCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp GGCAGGTATCTGGAGAAACCAGAGACCAAGGAAGGAACTGAGTCTTaGAGAAAGTACCTTGGAGAAAGCCAAGGTAGCAGTGGACAGACA +
Preference number: 5 (lower is better)
Translates to: GRYLEKPETKEGTES*RKYLGESQGSSGQT
Trigger: TGTCTGTCCACTGCTACCTTGGCTTTCTCCAAGGTACTTTCTCCAAGACTCAGTTCCTTCCTTGGTCTCTGGTTTCTCCAGATACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS-3UTR CAA 90 bp GCCTTGGTTTTTCAGGAAGACAGGTTGGAGAGCACGAGTCACTACAAAGCAGTAATGACCAGATCCTCCTaGTCTGCGTGCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ALVFQEDRLESTSHYKAVMTRSS*SACFSR
Trigger: TCTGGAGAAGCACGCAGACAAGGAGGATCTGGTCAT...TACTGCTTTGTAGTGACTCGTGCTCTCCAACCTGTCTTCCTGAAAAACCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp GAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGGTTCTTTACCCCAAAACTaGAAGCAGAAGTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: EHESLQSSKSEWCLQGLGSLPQN*KQKSLV
Trigger: CACCAGGGACTTCTGCTTCAAGTTTTGGGGTAAAGA...ACCCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CCA 90 bp CTACAGTCTAGTGGCTCTACTCACAGAAAACCAGGGACTCTGAACTaGAAGGAATCTAAGAATGCAGCCGGCTCACCTACAACAATGACG +
Preference number: 5 (lower is better)
Translates to: LQSSGSTHRKPGTLN*KESKNAAGSPTTMT
Trigger: CGTCATTGTTGTAGGTGAGCCGGCTGCATTCTTAGATTCCTTCCAGTTCAGAGTCCCTGGTTTTCTGTGAGTAGAGCCACTAGACTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465920.1
CDS-3UTR CAA 90 bp ATCTCTTTGAATCTCTTTGATTGGTGGCTCCAAGAGCAATGGGAAGTCAACAGCTCAACTGCAGCTTGGTaGGCCCGTTGCCATGGATCA +
Preference number: 5 (lower is better)
Translates to: ISLNLFDWWLQEQWEVNSSTAAW*ARCHGS
Trigger: TGATCCATGGCAACGGGCCAACCAAGCTGCAGTTGA...GCTGTTGACTTCCCATTGCTCTTGGAGCCACCAATCAAAGAGATTCAAAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS-3UTR CAA 90 bp GAGAGCACGAGTCACTACAAAGCAGTAAAAGTGAATGGTGTCTCCAGGGGCTGGCCTGCAGGAATCTCTTaGAATCTCTTTGATTGGTGG +
Preference number: 5 (lower is better)
Translates to: ESTSHYKAVKVNGVSRGWPAGIS*NLFDWW
Trigger: CCACCAATCAAAGAGATTCAAAGAGATTCCTGCAGG...CCAGCCCCTGGAGACACCATTCACTTTTACTGCTTTGTAGTGACTCGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 90 bp AAGGGAGGAAAAGGGAAGAGAAGAAATGAAAGGGAAGAGAAGAAATaGAAGGGAAGGAGGCCGGACATGGTACTCACGCCTGTAATTCCA +
Preference number: 5 (lower is better)
Translates to: KGGKGKRRNEREEKK*KGRRPDMVLTPVIP
Trigger: TGGAATTACAGGCGTGAGTACCATGTCCGGCCTCCTTCCCTTTCATTTCTTCTCTTCCCTTTCATTTCTTCTCTTCCCTTTTCCTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CCA 72 bp GGGGACGATCGGCCGACCCGGCGGCGCTCGCAGGGCTaGAAACTTCGCGACGGGGCCGCAGGTCCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: GDDRPTRRRSQG*KLRDGAAGPAA
Trigger: GGCAGCGGGACCTGCGGCCCCGTCGCGAAGTTTCCAGCCCTGCGAGCGCCGCCGGGTCGGCCGATCGTCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449038.5
CDS CCA 72 bp AGGGCCAGTAGCAGCAGGGGCCGCATGGCCGAGGTATaGGGGACGATCGGCCGACCCGGCGGCGCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: RASSSRGRMAEV*GTIGRPGGARR
Trigger: CCTGCGAGCGCCGCCGGGTCGGCCGATCGTCCCCCATACCTCGGCCATGCGGCCCCTGCTGCTACTGGCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000449038.5
CDS CCA 72 bp GCCAGCCCAGCAGGGCCAGTAGCAGCAGGGGCCGCATaGCCGAGGTATGGGGGACGATCGGCCGACCCGGCG +
Preference number: 6 (lower is better)
Translates to: ASPAGPVAAGAA*PRYGGRSADPA
Trigger: CGCCGGGTCGGCCGATCGTCCCCCATACCTCGGCCATGCGGCCCCTGCTGCTACTGGCCCTGCTGGGCTGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
CDS CAA 90 bp GAAGGCTGCTTCGGACGAAGCAGGGCCCAGGCGTGGGGCACAGGCTaGTGGCTAGGGAGGGAGTGGGCACGCTGGCCAGCTAAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: EGCFGRSRAQAWGTG*WLGREWARWPAKVG
Trigger: GCCCACCTTAGCTGGCCAGCGTGCCCACTCCCTCCCTAGCCACAAGCCTGTGCCCCACGCCTGGGCCCTGCTTCGTCCGAAGCAGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CCA 72 bp TGCGGTCCTGCCGGCACAGGTCTGCGCCCATGTTCCTaGCATCTGCATTCGCCATCCGCACCTCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: CGPAGTGLRPCS*HLHSPSAPQGP
Trigger: TGGGCCCTGAGGTGCGGATGGCGAATGCAGATGCCAGGAACATGGGCGCAGACCTGTGCCGGCAGGACCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 72 bp CTGCCGGCACAGGTCTGCGCCCATGTTCCTGGCATCTaGATTCGCCATCCGCACCTCAGGGCCCACCAGCTT +
Preference number: 6 (lower is better)
Translates to: LPAQVCAHVPGI*IRHPHLRAHQL
Trigger: AAGCTGGTGGGCCCTGAGGTGCGGATGGCGAATGCAGATGCCAGGAACATGGGCGCAGACCTGTGCCGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 72 bp GTCAGGCCTGGCCAATTAGGGATCGACGAAGGAGACTaGGATGTAGCGGGTGCCCCTGGTGGTGGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: VRPGQLGIDEGD*DVAGAPGGGEP
Trigger: GGGCTCCCCACCACCAGGGGCACCCGCTACATCGCAGTCTCCTTCGTCGATCCCTAATTGGCCAGGCCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000481933.1
CDS CCA 72 bp CCTGCAGCAGGCAAGGCTGGTCCAAGAGGGTGTCCATaGCCCTTACCGTCTCCACCAGCTTCCCTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PAAGKAGPRGCP*PLPSPPASLPG
Trigger: CCCTGGCAGGGAAGCTGGTGGAGACGGTAAGGGCCATGGACACCCTCTTGGACCAGCCTTGCCTGCTGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470133.1
CDS CAA 72 bp GTGAAGAGAACCAGAGCCACCAGCTCTGAGGCCCTCTaGGCAACAGGGGGCCTCCGGCTTGGCGTCGCCCTT +
Preference number: 6 (lower is better)
Translates to: VKRTRATSSEAL*ATGGLRLGVAL
Trigger: AAGGGCGACGCCAAGCCGGAGGCCCCCTGTTGCCAAGAGGGCCTCAGAGCTGGTGGCTCTGGTTCTCTTCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449038.5
CDS TCA 72 bp TGTTGGGCTCGGTCAGGGCCACGTCAGCATCCACGCTaGAGTAGTAGGTGCAGCTGCGGTCCTGCCGGCACA +
Preference number: 6 (lower is better)
Translates to: CWARSGPRQHPR*SSRCSCGPAGT
Trigger: TGTGCCGGCAGGACCGCAGCTGCACCTACTACTTCAGCGTGGATGCTGACGTGGCCCTGACCGAGCCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS CAA 72 bp AACCTGGGATCCAGAAACGAGGGATGCTGCTCACACTaGGGGAAGGGCTCCCCCGAGCTCCTGCCAGGACGG +
Preference number: 6 (lower is better)
Translates to: NLGSRNEGCCSH*GKGSPELLPGR
Trigger: CCGTCCTGGCAGGAGCTCGGGGGAGCCCTTCCCCAAGTGTGAGCAGCATCCCTCGTTTCTGGATCCCAGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449038.5
CDS CAA 90 bp TCCTGCTGCCGGATGTTGGCACAGAAGGCCATGTCGGGGTCCAGCTaGCTGTGGTGGAAGAGATCTGAGGACTGCAGCTCACCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: SCCRMLAQKAMSGSS*LWWKRSEDCSSPRR
Trigger: CCTGCGGGGTGAGCTGCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGCCAACATCCGGCAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000491536.5
CDS TCA 72 bp CGAGCTCCTGCCAGGACGGTGAAGTCTCTCCCCAGGTaGAGAGAACCAGAGCCACCAGCTCTGAGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: RAPARTVKSLPR*REPEPPALRPS
Trigger: AGAGGGCCTCAGAGCTGGTGGCTCTGGTTCTCTTCACCTGGGGAGAGACTTCACCGTCCTGGCAGGAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449038.5
CDS CCA 72 bp GCACAGAAGGCCATGTCGGGGTCCAGCTTGCTGTGGTaGAAGAGATCTGAGGACTGCAGCTCACCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: AQKAMSGSSLLW*KRSEDCSSPRR
Trigger: CCTGCGGGGTGAGCTGCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000491536.5
CDS GCA 72 bp GTCCCCAAGTTCAGCCCTCATTCCCCACACCGACTCTaGCACGTCACATCAGGGCAGCTAGGTGCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: VPKFSPHSPHRL*HVTSGQLGAQR
Trigger: TCTCTGGGCACCTAGCTGCCCTGATGTGACGTGGCAGAGTCGGTGTGGGGAATGAGGGCTGAACTTGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358133.5
ENST00000465920.1
CDS GCA 72 bp GGTTGTCTGAACCTGGGATCCAGAAACGAGGGATGCTaGTCACACTTGGGGAAGGGCTCCCCCGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GCLNLGSRNEGC*SHLGKGSPELL
Trigger: CAGGAGCTCGGGGGAGCCCTTCCCCAAGTGTGAGCAGCATCCCTCGTTTCTGGATCCCAGGTTCAGACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449038.5
CDS CCA 72 bp TTGGCACAGAAGGCCATGTCGGGGTCCAGCTTGCTGTaGTGGAAGAGATCTGAGGACTGCAGCTCACCCCGC +
Preference number: 6 (lower is better)
Translates to: LAQKAMSGSSLL*WKRSEDCSSPR
Trigger: GCGGGGTGAGCTGCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000196061.5
ENST00000491536.5
CDS CAA 72 bp ACGTTCTTGTTCTGTTGGATCAGCAGCCGCAGGCTGTaGGGCTCGGTCAGGGCCACGTCAGCATCCACGCTG +
Preference number: 6 (lower is better)
Translates to: TFLFCWISSRRL*GSVRATSASTL
Trigger: CAGCGTGGATGCTGACGTGGCCCTGACCGAGCCCAACAGCCTGCGGCTGCTGATCCAACAGAACAAGAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 72 bp GGAAGAACAGGGACACAAACGGCGTGGGCTGTTCGATaGACACGCCGACCAGGACCGTGGGCAGAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: GRTGTQTAWAVR*TRRPGPWAELH
Trigger: ATGAAGCTCTGCCCACGGTCCTGGTCGGCGTGTTCATCGAACAGCCCACGCCGTTTGTGTCCCTGTTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000465920.1
ENST00000485046.5
CDS GCA 72 bp TGCCCAGGTAGTTCAACTGCAGCTTGGTTGGCCCGTTaGCATGGATCAGGACCGGGAGGGTGTCATAGGCCA +
Preference number: 6 (lower is better)
Translates to: CPGSSTAAWLAR*HGSGPGGCHRP
Trigger: TGGCCTATGACACCCTCCCGGTCCTGATCCATGGCAACGGGCCAACCAAGCTGCAGTTGAACTACCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000465920.1
ENST00000485046.5
CDS CCA 72 bp GGACACCACCGGATACTTGGTCTCCAGCCTGCGGTCTaGGTAGATGAGCTCCTCAGCAGAGAAGACCACCTG +
Preference number: 6 (lower is better)
Translates to: GHHRILGLQPAV*VDELLSREDHL
Trigger: CAGGTGGTCTTCTCTGCTGAGGAGCTCATCTACCCAGACCGCAGGCTGGAGACCAAGTATCCGGTGGTGTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
ENST00000485046.5
CDS GCA 72 bp CTGCCGGAACTTCTTCAGGAGCTCCCGGGGCCCCGATaGAAACAGCACGTCATAGCTGTCTGCGAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: LPELLQELPGPR*KQHVIAVCEEN
Trigger: ATTCTCTTCGCAGACAGCTATGACGTGCTGTTTGCATCGGGGCCCCGGGAGCTCCTGAAGAAGTTCCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
ENST00000485046.5
CDS GCA 72 bp CACCAGCTTCACAGACTGGTACTCGCTGCCATGCTGTaGCAGGAACTCTTCCACCTGAGCCTTGTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: HQLHRLVLAAML*QELFHLSLVVL
Trigger: CAGCACCACAAGGCTCAGGTGGAAGAGTTCCTGGCACAGCATGGCAGCGAGTACCAGTCTGTGAAGCTGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 72 bp AGGAGTTCAGGGTTTTCCTCACTATTGGAAGAAGGCTaGTTCGGACGAAGCAGGGCCCAGGCGTGGGGCACA +
Preference number: 6 (lower is better)
Translates to: RSSGFSSLLEEG*FGRSRAQAWGT
Trigger: TGTGCCCCACGCCTGGGCCCTGCTTCGTCCGAAGCAGCCTTCTTCCAATAGTGAGGAAAACCCTGAACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CAA 72 bp CGGATGTTGGCACAGAAGGCCATGTCGGGGTCCAGCTaGCTGTGGTGGAAGAGATCTGAGGACTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: RMLAQKAMSGSS*LWWKRSEDCSS
Trigger: TGAGCTGCAGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGCCAACATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000470133.1
ENST00000491536.5
CDS GCA 72 bp AGCCTGTTTCGAAGGTCCAGAAGCGCGGGATGTAGTTaGCCAGGTAGTTCAACTGCAGCTTGGTTGGCCCGT +
Preference number: 6 (lower is better)
Translates to: SLFRRSRSAGCS*PGSSTAAWLAR
Trigger: ACGGGCCAACCAAGCTGCAGTTGAACTACCTGGGCAACTACATCCCGCGCTTCTGGACCTTCGAAACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000465920.1
ENST00000485046.5
CDS CCA 72 bp CCCTGGTGTAGTAGCCGGGGTAGAGCTTCTCCGTCATaGGCGCAATGTACTCCAGCAGGAATTTGTGCCACT +
Preference number: 6 (lower is better)
Translates to: PWCSSRGRASPS*AQCTPAGICAT
Trigger: AGTGGCACAAATTCCTGCTGGAGTACATTGCGCCCATGACGGAGAAGCTCTACCCCGGCTACTACACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 72 bp TACTCGCTGCCATGCTGTGCCAGGAACTCTTCCACCTaGGCCTTGTGGTGCTGCTCGTGGTTGTGGATGAAA +
Preference number: 6 (lower is better)
Translates to: YSLPCCARNSST*ALWCCSWLWMK
Trigger: TTTCATCCACAACCACGAGCAGCACCACAAGGCTCAGGTGGAAGAGTTCCTGGCACAGCATGGCAGCGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 72 bp GCTGTCTGCGAAGAGAATGACCAGATCCTCCTTGTCTaGGTGCTTCTCCAGAGCTTTCTTCAGCAGCCGGAC +
Preference number: 6 (lower is better)
Translates to: AVCEENDQILLV*VLLQSFLQQPD
Trigger: GTCCGGCTGCTGAAGAAAGCTCTGGAGAAGCACGCAGACAAGGAGGATCTGGTCATTCTCTTCGCAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
ENST00000485046.5
CDS GCA 72 bp TCCGTCATGGGCGCAATGTACTCCAGCAGGAATTTGTaGCACTCCCGCTCAAAGCCGATCTGGTTCATGTGG +
Preference number: 6 (lower is better)
Translates to: SVMGAMYSSRNL*HSRSKPIWFMW
Trigger: CCACATGAACCAGATCGGCTTTGAGCGGGAGTGGCACAAATTCCTGCTGGAGTACATTGCGCCCATGACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 72 bp AGCCTGTTTCGAAGGTCCAGAAGCGCGGGATGTAGTTaGCCAGGTAGTTCAACTGCAGCACCACAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: SLFRRSRSAGCS*PGSSTAAPQQE
Trigger: TTCCTGCTGTGGTGCTGCAGTTGAACTACCTGGGCAACTACATCCCGCGCTTCTGGACCTTCGAAACAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429000.6
CDS CCA 72 bp AAGGCTCCATCCAGGTTCTGGAAGATACGGCAGCGGTaGTCCAGGGTGATATTGATCTGCTCCCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: KAPSRFWKIRQR*SRVILICSLFS
Trigger: GGAGAAGAGGGAGCAGATCAATATCACCCTGGACCACCGCTGCCGTATCTTCCAGAACCTGGATGGAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000429000.6
ENST00000485046.5
CDS CAA 72 bp GCCAGGTTCCTCGCTCTCACATGGCCCATTTCAAACTaGAGCACGACCTCATCCAAGGCTCCATCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: ARFLALTWPISN*STTSSKAPSRF
Trigger: GAACCTGGATGGAGCCTTGGATGAGGTCGTGCTCAAGTTTGAAATGGGCCATGTGAGAGCGAGGAACCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000196061.5
ENST00000465920.1
ENST00000485046.5
CDS CAA 72 bp TCGGTCTCCTTAGTGGCCACCGTGAGGACTAAAAGGTaGTCTGTAGCGCACTTAGAGCAGCCCCAGGTCAAG +
Preference number: 6 (lower is better)
Translates to: SVSLVATVRTKR*SVAHLEQPQVK
Trigger: CTTGACCTGGGGCTGCTCTAAGTGCGCTACAGACAACCTTTTAGTCCTCACGGTGGCCACTAAGGAGACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485046.5
CDS GCA 72 bp TCTGCGAAGAGAATGACCAGATCCTCCTTGTCTGCGTaGTTCTCCAGAGCTTTCTTCAGCAGCCGGACCTTC +
Preference number: 6 (lower is better)
Translates to: SAKRMTRSSLSA*FSRAFFSSRTF
Trigger: GAAGGTCCGGCTGCTGAAGAAAGCTCTGGAGAAGCACGCAGACAAGGAGGATCTGGTCATTCTCTTCGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
ENST00000485046.5
CDS CCA 72 bp CTGTCAGTAACAGGAGTTCAGGGTTTTCCTCACTATTaGAAGAAGGCTGCTTCGGACGAAGCAGGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LSVTGVQGFPHY*KKAASDEAGPR
Trigger: CCTGGGCCCTGCTTCGTCCGAAGCAGCCTTCTTCCAATAGTGAGGAAAACCCTGAACTCCTGTTACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CAA 72 bp TTCTCCGTCATGGGCGCAATGTACTCCAGCAGGAATTaGTGCCACTCCCGCTCAAAGCCGATCTGGTTCATG +
Preference number: 6 (lower is better)
Translates to: FSVMGAMYSSRN*CHSRSKPIWFM
Trigger: CATGAACCAGATCGGCTTTGAGCGGGAGTGGCACAAATTCCTGCTGGAGTACATTGCGCCCATGACGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS TCA 72 bp ACCCCGCAGGGCACTGCCCTTGATCAAGTAGATGTTTaGAATATAGGGCACATTCCAGACACCAACACGCCG +
Preference number: 6 (lower is better)
Translates to: TPQGTALDQVDV*NIGHIPDTNTP
Trigger: CGGCGTGTTGGTGTCTGGAATGTGCCCTATATTTCAAACATCTACTTGATCAAGGGCAGTGCCCTGCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000196061.5
CDS GCA 72 bp GGGCCAGGTCTACATGGGGCTCTATGCTCGAGTGCCTaGAACTACCTGGCACAGAAAAGGTTCTCAACAAAA +
Preference number: 6 (lower is better)
Translates to: GPGLHGALCSSA*NYLAQKRFSTK
Trigger: TTTTGTTGAGAACCTTTTCTGTGCCAGGTAGTTGCAGGCACTCGAGCATAGAGCCCCATGTAGACCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CAA 72 bp TTCTGGAAGATACGGCAGCGGTGGTCCAGGGTGATATaGATCTGCTCCTGCAGGAAAGAAGGTACCAGACTG +
Preference number: 6 (lower is better)
Translates to: FWKIRQRWSRVI*ICSCRKEGTRL
Trigger: CAGTCTGGTACCTTCTTTCCTGCAGGAGCAGATCAATATCACCCTGGACCACCGCTGCCGTATCTTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465920.1
CDS TCA 72 bp ATGCAAACAGCACGTCATAGCTGTCTGCGAAGAGAATaGCCAGATCCTCCTTGTCTGCGTGCTTCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: MQTARHSCLRRE*PDPPCLRASPE
Trigger: CTCTGGAGAAGCACGCAGACAAGGAGGATCTGGTCATTCTCTTCGCAGACAGCTATGACGTGCTGTTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000196061.5
ENST00000358133.5
ENST00000429000.6
ENST00000449038.5
ENST00000485046.5
CDS TCA 72 bp AGGAATCTAAGAATGCAGCCGGCTCACCTACAACAATaGCGGCCGTTAAGAGTAACCAGCACCTGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: RNLRMQPAHLQQ*RPLRVTSTCQA
Trigger: TGCTTGGCAGGTGCTGGTTACTCTTAACGGCCGTCATTGTTGTAGGTGAGCCGGCTGCATTCTTAGATTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465920.1
CDS CCA 72 bp AGTGGCTCTACTCACAGAAAACCAGGGACTCTGAACTaGAAGGAATCTAAGAATGCAGCCGGCTCACCCTCT +
Preference number: 6 (lower is better)
Translates to: SGSTHRKPGTLN*KESKNAAGSPS
Trigger: AGAGGGTGAGCCGGCTGCATTCTTAGATTCCTTCCAGTTCAGAGTCCCTGGTTTTCTGTGAGTAGAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358133.5
CDS CCA 72 bp AGTGGCTCTACTCACAGAAAACCAGGGACTCTGAACTaGAAGGAATCTAAGAATGCAGCCGGCTCACCTACA +
Preference number: 6 (lower is better)
Translates to: SGSTHRKPGTLN*KESKNAAGSPT
Trigger: TGTAGGTGAGCCGGCTGCATTCTTAGATTCCTTCCAGTTCAGAGTCCCTGGTTTTCTGTGAGTAGAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465920.1
CDS TCA 72 bp CAGGTATCTGGAGAAACCAGAGACCAAGGAAGGAACTaGGTCTTGGAGAAAGTACCTTGGAGAAAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: QVSGETRDQGRN*VLEKVPWRKPR
Trigger: CCTTGGCTTTCTCCAAGGTACTTTCTCCAAGACTCAGTTCCTTCCTTGGTCTCTGGTTTCTCCAGATACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CCA 72 bp CTGGAGAAACCAGAGACCAAGGAAGGAACTGAGTCTTaGAGAAAGTACCTTGGAGAAAGCCAAGGTAGCAGT +
Preference number: 6 (lower is better)
Translates to: LEKPETKEGTES*RKYLGESQGSS
Trigger: ACTGCTACCTTGGCTTTCTCCAAGGTACTTTCTCCAAGACTCAGTTCCTTCCTTGGTCTCTGGTTTCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS CAA 90 bp AGAAACCAGAGACCAAGGAAGGAACTGAGTCTTGGAGAAAGTACCTaGGAGAAAGCCAAGGTAGCAGTGGACAGACACATGAGTGATAGC +
Preference number: 6 (lower is better)
Translates to: RNQRPRKELSLGEST*EKAKVAVDRHMSDS
Trigger: GCTATCACTCATGTGTCTGTCCACTGCTACCTTGGCTTTCTCCAAGGTACTTTCTCCAAGACTCAGTTCCTTCCTTGGTCTCTGGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS TCA 72 bp AAAGGGAAGAGAAGAAATGAAAGGGAAGAGAAGAAATaGAAGGGAAGGAGGCCGGACATGGTACTCACGCCT +
Preference number: 6 (lower is better)
Translates to: KGKRRNEREEKK*KGRRPDMVLTP
Trigger: AGGCGTGAGTACCATGTCCGGCCTCCTTCCCTTTCATTTCTTCTCTTCCCTTTCATTTCTTCTCTTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481933.1
CDS TCA 72 bp TTTCCGGGGAACCACAGTAAGCATTCAAGGGATGAATaGCAACTGTCAGTAACAGGAGTTCAGGGTTTTCCT +
Preference number: 6 (lower is better)
Translates to: FPGNHSKHSRDE*QLSVTGVQGFP
Trigger: AGGAAAACCCTGAACTCCTGTTACTGACAGTTGTCATTCATCCCTTGAATGCTTACTGTGGTTCCCCGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481933.1