Pregenerated sensors for PLN (Homo sapiens)
Ensembl gene IDs: ENSG00000198523Ensembl transcript IDs: ENST00000357525.6
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGCATTGGATGTTAGGCTaGAATGGAAGACAACCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGHWMLG*NGRQPA Trigger: TGCAGGTTGTCTTCCATTCCAGCCTAACATCCAATG...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR CCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCTTTCCTTGCCTGCATTaGATGTTAGGCTGGAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLFPCLH*MLGWNG Trigger: TCCATTCCAGCCTAACATCCAATGCAGGCAAGGAAA...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGGATGTTAGGCTGGAATaGAAGACAACCTGCAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGDVRLE*KTTCKI Trigger: GATTTTGCAGGTTGTCTTCCATTCCAGCCTAACATC...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGATTTGTGAGCCATGTTaGGGAAATCAACAGTTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGICEPC*GNQQLH Trigger: ATGCAACTGTTGATTTCCTCAACATGGCTCACAAAT...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR GCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCGAATGGAAGACAACCTaGAAAATCATTCTGAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLEWKTT*KIILKS Trigger: AGACTTCAGAATGATTTTGCAGGTTGTCTTCCATTC...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR CCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCGATGTGAGGAGTCAGTaGACTATTTTGAATAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLDVRSQ*TILNND Trigger: GTCATTATTCAAAATAGTCCACTGACTCCTCACATC...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGCTTCTACTCAGGAAGTaGTCTGTTATACAATATTGT | + |
|
Preference number: 2 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGLLLRK*SVIQYC Trigger: ACAATATTGTATAACAGACCACTTCCTGAGTAGAAG...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR GCA 90 bp | AAAGAAACTCTTCTACTCAGGAAGTGGTCTGTTATACAATATTGTTTTCCTGTCGCTGATGTGGCAAGCTaGAGATCTAGAGGTTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: KETLLLRKWSVIQYCFPVADVAS*RSRGCS Trigger: GCTACAACCTCTAGATCTGCAGCTTGCCACATCAGC...GACAGGAAAACAATATTGTATAACAGACCACTTCCTGAGTAGAAGAGTTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCACCAGTTCTCATCTGTaGATCATATGTCTTAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLTSSHL*IICLRT Trigger: TGTTCTAAGACATATGATCAACAGATGAGAACTGGT...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCAATCTTTTATTTTCCTaGCCTGCATTGGATGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLNLLFS*PALDVR Trigger: CCTAACATCCAATGCAGGCAAGGAAAATAAAAGATT...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGGGCTCTTCTTATAGCTaGGCGAGTGAGGTATTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGGSSYS*ASEVLD Trigger: GTCCAATACCTCACTCGCTCAGCTATAAGAAGAGCC...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGGGGTCCACTTATACATaGATATTCTTTCCCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGGSTYT*IFFPPL Trigger: GAGTGGGGGAAAGAATATTCATGTATAAGTGGACCC...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR GCA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGCTGATGTGGCAAGCTaGAGATCTAGAGGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSPNPHVQGSAVDVIADVAS*RSRGCS Trigger: GCTACAACCTCTAGATCTGCAGCTTGCCACATCAGC...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGGAGCGAGTGAGGTATTaGACTTTCTCCATGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGERVRY*TFSMIP Trigger: TGGTATCATGGAGAAAGTCCAATACCTCACTCGCTC...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCCATTGGATGTTAGGCTaGAATGGAAGACAACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLHWMLG*NGRQPA Trigger: TGCAGGTTGTCTTCCATTCCAGCCTAACATCCAATG...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGCAGGACAGGAAGTCTaGAGTTTTAAGTGGTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSPNPHVQGSAVDVIAGQEV*SFKWSR Trigger: TCTCGACCACTTAAAACTTCAGACTTCCTGTCCTGC...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAATTGGACTTTCTCCATaGTACCAGCAGGACAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSPNPHVQGSAVDVIIGLSP*YQQDRK Trigger: CTTCCTGTCCTGCTGGTATCATGGAGAAAGTCCAAT...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCCTAAAACCAGTGAGGTaGGTGTATCACCTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLLKPVR*VYHLLF Trigger: AAACAACAGGTGATACACTCACCTCACTGGTTTTAG...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR GCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGATCTTTCTCCTCCTCTaGCTACTCAATGTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGIFLLL*LLNVKT Trigger: TGTCTTCACATTGAGTAGGCAGAGGAGGAGAAAGAT...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCGATGTTAGGCTGGAATaGAAGACAACCTGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLDVRLE*KTTCKI Trigger: GATTTTGCAGGTTGTCTTCCATTCCAGCCTAACATC...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAAGAGAAGCATCACGATaGTACAGATCAGCAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSPNPHVQGSAVDVIREASR*YRSARD Trigger: GTCTCTTGCTGATCTGTATCATCGTGATGCTTCTCT...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCGCTTTATATATGAAGTaGACTTGTTGGCAGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLALYMK*TCWQCS Trigger: ACTGCACTGCCAACAAGTTCACTTCATATATAAAGC...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR GCA 90 bp | ACCCCTAAGACAAGACTGCAAGACCAACGCCTTCTCTTCCTCCCCATCTTTCTCCTCAGTAGAGTGGACTaGAAAATAGATGCTTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPKTRLQDQRLLFLPIFLLSRVD*KIDAYH Trigger: ATGGTAAGCATCTATTTTGCAGTCCACTCTACTGAG...GAGAAAGATGGGGAGGAAGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATACCAGTTCTCATCTGTTaGTCATATGTCTTAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSPNPHVQGSAVDVIPVLIC*SYVLEQ Trigger: CTGTTCTAAGACATATGATCAACAGATGAGAACTGG...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR GCA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAAACAAGGGCTTGAATTaGAAGGGTCCACTTATACAT | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSPNPHVQGSAVDVINKGLN*KGPLIH Trigger: ATGTATAAGTGGACCCTTGCAATTCAAGCCCTTGTT...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGTGTAGATGTAATAGATaGGCCAACAAGTTCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGCRCNR*ANKFIS Trigger: TGAAATGAACTTGTTGGCCCATCTATTACATCTACA...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR GCA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATACACTTAAGAAATCTCTaGCCTTCTGTTCTTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RIVSSPNPHVQGSAVDVIHLRNL*PSVLQI Trigger: TATCTGAAGAACAGAAGGGCAGAGATTTCTTAAGTG...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR GCA 90 bp | AAAGAAACTCTTCTACTCAGGAAGTGGTCTGTTATACAATATTGTTTTCCTGTCCCCCTAAGACAAGACTaGAAGACCAACGCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KETLLLRKWSVIQYCFPVPLRQD*KTNAFS Trigger: AGAGAAGGCGTTGGTCTTGCAGTCTTGTCTTAGGGG...GACAGGAAAACAATATTGTATAACAGACCACTTCCTGAGTAGAAGAGTTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | AAAGAAACTCTTCTACTCAGGAAGTGGTCTGTTATACAATATTGTTTTCCTGTCATTTGTGAGCCATGTTaGGGAAATCAACAGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KETLLLRKWSVIQYCFPVICEPC*GNQQLH Trigger: ATGCAACTGTTGATTTCCTCAACATGGCTCACAAAT...GACAGGAAAACAATATTGTATAACAGACCACTTCCTGAGTAGAAGAGTTTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR TCA 90 bp | AAAGAAACTCTTCTACTCAGGAAGTGGTCTGTTATACAATATTGTTTTCCTGTCTATTGGAAGATGTTCTaGAATGGTCAGAGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KETLLLRKWSVIQYCFPVYWKMF*NGQRRN Trigger: ATTTCTCCTCTGACCATTTCAGAACATCTTCCAATA...GACAGGAAAACAATATTGTATAACAGACCACTTCCTGAGTAGAAGAGTTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR GCA 90 bp | AAAGAAACTCTTCTACTCAGGAAGTGGTCTGTTATACAATATTGTTTTCCTGTCGAATGGAAGACAACCTaGAAAATCATTCTGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KETLLLRKWSVIQYCFPVEWKTT*KIILKS Trigger: AGACTTCAGAATGATTTTGCAGGTTGTCTTCCATTC...GACAGGAAAACAATATTGTATAACAGACCACTTCCTGAGTAGAAGAGTTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CCA 90 bp | AAAGAAACTCTTCTACTCAGGAAGTGGTCTGTTATACAATATTGTTTTCCTGTCGATGTGAGGAGTCAGTaGACTATTTTGAATAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KETLLLRKWSVIQYCFPVDVRSQ*TILNND Trigger: GTCATTATTCAAAATAGTCCACTGACTCCTCACATC...GACAGGAAAACAATATTGTATAACAGACCACTTCCTGAGTAGAAGAGTTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CAA 90 bp | CGAATTGTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATATTGAACAACAAGGGCTaGAATTGCAAGGGTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RIVSSPNPHVQGSAVDVILNNKG*NCKGPL Trigger: AAGTGGACCCTTGCAATTCAAGCCCTTGTTGTTCAA...TATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CAA 90 bp | GTCAGCTCCCCTAACCCCCATGTTCAAGGGTCAGCTGTAGATGTAATAGATGGGACCAGTTCTCATCTGTaGATCATATGTCTTAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VSSPNPHVQGSAVDVIDGTSSHL*IICLRT Trigger: TGTTCTAAGACATATGATCAACAGATGAGAACTGGT...CCCATCTATTACATCTACAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS-3UTR CAA 90 bp | AAAGAAACTCTTCTACTCAGGAAGTGGTCTGTTATACAATATTGTTTTCCTGTCAATCTTTTATTTTCCTaGCCTGCATTGGATGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KETLLLRKWSVIQYCFPVNLLFS*PALDVR Trigger: CCTAACATCCAATGCAGGCAAGGAAAATAAAAGATT...GACAGGAAAACAATATTGTATAACAGACCACTTCCTGAGTAGAAGAGTTTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||
| CDS CCA 72 bp | GTTGAGGCTCTTCTTATAGCTGAGCGAGTGAGGTATTaGACTTTCTCCATGATACCAGCAGGACAGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VEALLIAERVRY*TFSMIPAGQEV Trigger: GACTTCCTGTCCTGCTGGTATCATGGAGAAAGTCCAATACCTCACTCGCTCAGCTATAAGAAGAGCCTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357525.6 |
||