RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166851

Ensembl transcript IDs: ENST00000300093.9, ENST00000562272.5, ENST00000562407.1, ENST00000564794.1, ENST00000564947.1, ENST00000570220.5

Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp TCTTGTGCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGGGTCGGCCGGTaGCCGTGCCAGCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SCAAPGETKTLSIRKREAPRVGR*PCQLPC
Trigger: GCAGGGAAGCTGGCACGGGCACCGGCCGACCCTGGG...AGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGCACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR CCA 90 bp CAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCACCCTTCGATCTCTTTCGCCGGTaGAGCCGCCGCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QERQRHFPYVSGRLPAPFDLFRR*SRRRSS
Trigger: GGAGCTCCGGCGGCGGCTCCACCGGCGAAAGAGATC...GAAGGGTGCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR CCA 90 bp CAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCACCCTTCCAGCAGCTCCAGGTCTaGGCGCTCCAACTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: QERQRHFPYVSGRLPAPFQQLQV*ALQLPR
Trigger: GCGGGGCAGTTGGAGCGCCCAGACCTGGAGCTGCTG...GAAGGGTGCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp GCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCCTCCCGAAGCTGCGCTaGAGACCTCGATCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAPGETKTLSIRKREAPSLPKLR*RPRSEQ
Trigger: CTGCTCGGATCGAGGTCTGCAGCGCAGCTTCGGGAG...GCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp GCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCTCATGCTCCCGAAGCTaGGCTGCAGACCTCGATCCG +
Preference number: 4 (lower is better)
Translates to: AAPGETKTLSIRKREAPSSCSRS*AADLDP
Trigger: CGGATCGAGGTCTGCAGCGCAGCTTCGGGAGCATGA...GCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp TCTTGTGCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTTCTGGGCGCTCCAACTaGCCCGCAGGCAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCAAPGETKTLSIRKREASGRSN*PAGSSS
Trigger: ACTGGAACTGCCTGCGGGGCAGTTGGAGCGCCCAGA...AGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGCACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp GCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCTCCCAGGCTCTCCCTTaGTGGGTACTCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AAPGETKTLSIRKREAPSSQALP*WVLFPA
Trigger: TGCTGGAAAGAGTACCCAGCAAGGGAGAGCCTGGGA...GCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR CCA 90 bp GCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCCAGGCTCTCCCTTGCTaGGTACTCTTTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AAPGETKTLSIRKREAPSQALPC*VLFPAA
Trigger: AGCTGCTGGAAAGAGTACCCAGCAAGGGAGAGCCTG...GCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp CAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCACCCTTCCTTCCCTGCAGTCACTaGAGCACTCATGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: QERQRHFPYVSGRLPAPFLPCSH*STHAPE
Trigger: TTCGGGAGCATGAGTGCTGCAGTGACTGCAGGGAAG...GAAGGGTGCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR CCA 90 bp CAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCACCCTTCGACATCTTCTCCCTCTaGTGCGGCTTGAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QERQRHFPYVSGRLPAPFDIFSL*CGLSSR
Trigger: TCTGCTGCTCAAGCCGCACCAGAGGGAGAAGATGTC...GAAGGGTGCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR TCA 90 bp CTTGTGCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCTGGGCGAGGCTGCGGTaGATGGATATTTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LVQLQERQRHFPYVSGRLWARLR*MDISMD
Trigger: GTCCATGGAAATATCCATTCACCGCAGCCTCGCCCA...GAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR TCA 90 bp GCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCAGCTTGAGGTCTCGATaGATAACTCGGTTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: AAPGETKTLSIRKREAPSSLRSR*ITRFRC
Trigger: GCACCGAAACCGAGTTATTCATCGAGACCTCAAGCT...GCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp TCTTGTGCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTTCACTGCAGCACTCATaGTCCCGAAGCTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SCAAPGETKTLSIRKREASLQHS*SRSCAA
Trigger: TGCAGCGCAGCTTCGGGAGCATGAGTGCTGCAGTGA...AGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGCACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp TCTTGTGCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCGTGCCAGCTTCCCTaGAGTCACTGCAGCACTCAT +
Preference number: 4 (lower is better)
Translates to: SCAAPGETKTLSIRKREAPCQLP*SHCSTH
Trigger: ATGAGTGCTGCAGTGACTGCAGGGAAGCTGGCACGG...AGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGCACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS-3UTR GCA 90 bp CTTGTGCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCATCTTCTCCCTCTGGTaGGGCTTGAGCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LVQLQERQRHFPYVSGRLIFSLW*GLSSRD
Trigger: GTCTCTGCTGCTCAAGCCGCACCAGAGGGAGAAGAT...GAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS CCA 90 bp GGCCGCGGGGATTTAAAATCCAAACCCGCCCGCCGCGCGGCACCATaGGAGCGCCCTGCGCAGCAGCAGCCTTTAAACCCGGACCCAGCC +
Preference number: 5 (lower is better)
Translates to: GRGDLKSKPARRAAP*ERPAQQQPLNPDPA
Trigger: GGCTGGGTCCGGGTTTAAAGGCTGCTGCTGCGCAGGGCGCTCCCATGGTGCCGCGCGGCGGGCGGGTTTGGATTTTAAATCCCCGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 90 bp GTGCCAGCTTCCCTGCAGTCACTGCAGCACTCATGCTCCCGAAGCTaGGCTGCAGACCTCGATCCGAGCAGAGCCTCCGCACCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: VPASLQSLQHSCSRS*AADLDPSRASAPLR
Trigger: GCGGAGCGGTGCGGAGGCTCTGCTCGGATCGAGGTCTGCAGCGCAGCTTCGGGAGCATGAGTGCTGCAGTGACTGCAGGGAAGCTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS CCA 90 bp CCCAGGCTCTCCCTTGCTGGGTACTCTTTCCAGCAGCTCCAGGTCTaGGCGCTCCAACTGCCCCGCAGGCAGTTCCAGTTCCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PRLSLAGYSFQQLQV*ALQLPRRQFQFPSS
Trigger: GCTGCTGGGGAACTGGAACTGCCTGCGGGGCAGTTGGAGCGCCCAGACCTGGAGCTGCTGGAAAGAGTACCCAGCAAGGGAGAGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS TCA 90 bp GACTGTGGGTGGGAAGGAGAGGGCAGGAGGGATGGGGAGGTGGATTaGGGCCGGTGGGGAAGGGAGAGGGTTACCAGGCAAAGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: DCGWEGEGRRDGEVD*GRWGRERVTRQRKH
Trigger: GTGCTTCCTTTGCCTGGTAACCCTCTCCCTTCCCCACCGGCCTCAATCCACCTCCCCATCCCTCCTGCCCTCTCCTTCCCACCCACAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 90 bp CGCCCGAACACGTGGGATAGCCTGGGAAACCAAACCCGGCGTGGATaGGGAGACCCAGCCCCGAGAGAGGAGGAATTCCTTCGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: RPNTWDSLGNQTRRG*GDPAPREEEFLRGF
Trigger: GAAACCCCGAAGGAATTCCTCCTCTCTCGGGGCTGGGTCTCCGCATCCACGCCGGGTTTGGTTTCCCAGGCTATCCCACGTGTTCGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 90 bp TGTGATCCTGAGCCGCTCACTCCACATTCAACCCACATGGGCCACTaGCAGGCATGCGGAGCCTACCCCAGCTCTCTCCTGCGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: CDPEPLTPHSTHMGH*QACGAYPSSLLRLV
Trigger: CACCAGGCGCAGGAGAGAGCTGGGGTAGGCTCCGCATGCCTGGCAGTGGCCCATGTGGGTTGAATGTGGAGTGAGCGGCTCAGGATCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564794.1
CDS GCA 90 bp GAAGCCGTGGCCTCTGACCCAACGGTGTGGCCCTGCAGGATGACCTaGCACTCAGGCAAACAGCTTGAAGGCACCAGCAGCTCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: EAVASDPTVWPCRMT*HSGKQLEGTSSSEL
Trigger: CAGCTCTGAGCTGCTGGTGCCTTCAAGCTGTTTGCCTGAGTGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGCCACGGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS CCA 90 bp CCAGCACCCTTCTCTAGCAGCTCCAAGTCCCAGGCTCTCCCTTGCTaGGTACTCTTTCCAGCAGCTCCAGGTCTGGGCGCTCCAACTGCC +
Preference number: 5 (lower is better)
Translates to: PAPFSSSSKSQALPC*VLFPAAPGLGAPTA
Trigger: GGCAGTTGGAGCGCCCAGACCTGGAGCTGCTGGAAAGAGTACCCAGCAAGGGAGAGCCTGGGACTTGGAGCTGCTAGAGAAGGGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS CCA 90 bp GAGCTTGGTGTGATCCTGAGCCGCTCACTCCACATTCAACCCACATaGGCCACTGCCAGGCATGCGGAGCCTACCCCAGCTCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ELGVILSRSLHIQPT*ATARHAEPTPALSC
Trigger: GCAGGAGAGAGCTGGGGTAGGCTCCGCATGCCTGGCAGTGGCCCATGTGGGTTGAATGTGGAGTGAGCGGCTCAGGATCACACCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564794.1
CDS TCA 90 bp CTTCAGAAGCCGTGGCCTCTGACCCAACGGTGTGGCCCTGCAGGATaGCCTGCCACTCAGGCAAACAGCTTGAAGGCACCAGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LQKPWPLTQRCGPAG*PATQANSLKAPAAQ
Trigger: CTGAGCTGCTGGTGCCTTCAAGCTGTTTGCCTGAGTGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGCCACGGCTTCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS TCA 90 bp GCAGCAGCAGCCTTTAAACCCGGACCCAGCCGGGGAAAACCTGATTaGCACGGACGCCCGAACACGTGGGATAGCCTGGGAAACCAAACC +
Preference number: 5 (lower is better)
Translates to: AAAAFKPGPSRGKPD*HGRPNTWDSLGNQT
Trigger: GGTTTGGTTTCCCAGGCTATCCCACGTGTTCGGGCGTCCGTGTCAATCAGGTTTTCCCCGGCTGGGTCCGGGTTTAAAGGCTGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS TCA 90 bp CCCCCAGCACCTCGCGTCCAGAAGCTGACTTCCCTATCAGCAACATaGCTCAGACTCCACTTCACTGGAACCCCCTCCTCTAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPAPRVQKLTSLSAT*LRLHFTGTPSSSSS
Trigger: GGAGCTGCTAGAGGAGGGGGTTCCAGTGAAGTGGAGTCTGAGTCATGTTGCTGATAGGGAAGTCAGCTTCTGGACGCGAGGTGCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS-3UTR CAA 90 bp GCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCCCAGCTCCCTCTGGTGCGGCTaGAGCAGCAGAGACTTAGGC +
Preference number: 5 (lower is better)
Translates to: AAPGETKTLSIRKREAPSSLWCG*SSRDLG
Trigger: GCCTAAGTCTCTGCTGCTCAAGCCGCACCAGAGGGA...GCTGGGAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS TCA 90 bp ATAGTGCTCACTGTGAGGCAACAGATCTTCAGAAGCCGTGGCCTCTaGCCCAACGGTGTGGCCCTGCAGGATGACCTGCCACTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: IVLTVRQQIFRSRGL*PNGVALQDDLPLRQ
Trigger: TTGCCTGAGTGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGCCACGGCTTCTGAAGATCTGTTGCCTCACAGTGAGCACTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS TCA 90 bp TCTTCCTCTACCTCGGGGCCAGGGAACAGTAGCATCGCCATCACCTaGGAGCTTGTTAGAACCGCAAAGGCAAACGTTCAGGCCCTACCC +
Preference number: 5 (lower is better)
Translates to: SSSTSGPGNSSIAIT*ELVRTAKANVQALP
Trigger: GGGTAGGGCCTGAACGTTTGCCTTTGCGGTTCTAACAAGCTCTCAGGTGATGGCGATGCTACTGTTCCCTGGCCCCGAGGTAGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS TCA 90 bp ACCAGGCAAAGGAAGCACAGGACTGGACTCTGGACTCCCAAGGGATaGAAGAGGGGTCTTGGTGGGTTTCTCTCCTTCCCTATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TRQRKHRTGLWTPKG*KRGLGGFLSFPMPP
Trigger: TGGGGGCATAGGGAAGGAGAGAAACCCACCAAGACCCCTCTTTCATCCCTTGGGAGTCCAGAGTCCAGTCCTGTGCTTCCTTTGCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS-3UTR CAA 90 bp CTTGTGCAGCTCCAGGAGAGACAAAGACACTTTCCATACGTAAGCGGGAGGCTCGTCCCAGGCTCTCCCTaGCTGGGTACTCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: LVQLQERQRHFPYVSGRLVPGSP*LGTLSS
Trigger: GCTGGAAAGAGTACCCAGCAAGGGAGAGCCTGGGAC...GAGCCTCCCGCTTACGTATGGAAAGTGTCTTTGTCTCTCCTGGAGCTGCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570220.5
CDS TCA 90 bp CAGACCTCCCGAGTCAGTGTCCGCCTCTCAACAAGACTGCTCAGGTaGTTCCTACACATCCTGAAGTTGGAGAAGCACAGTACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: QTSRVSVRLSTRLLR*FLHILKLEKHSTRA
Trigger: GGCTCTGGTACTGTGCTTCTCCAACTTCAGGATGTGTAGGAATCACCTGAGCAGTCTTGTTGAGAGGCGGACACTGACTCGGGAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 90 bp GTTTCTCCCTTTCTCGGGCGTCCGGGAAAGCTCCTGCGGTTCACTTaGGCCTCCTCCAGGAAGCTTTTACTTAAATCTTCCTCTACCTCG +
Preference number: 5 (lower is better)
Translates to: VSPFLGRPGKLLRFT*ASSRKLLLKSSSTS
Trigger: CGAGGTAGAGGAAGATTTAAGTAAAAGCTTCCTGGAGGAGGCGCAAGTGAACCGCAGGAGCTTTCCCGGACGCCCGAGAAAGGGAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 90 bp CCTGCCACTCAGGCAAACAGCTTGAAGGCACCAGCAGCTCAGAGCTaGCCAGCTTTGAGCAAAGAATGGAAAGCATCTTCAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: PATQANSLKAPAAQS*PALSKEWKASSASR
Trigger: CCTGGATGCTGAAGATGCTTTCCATTCTTTGCTCAAAGCTGGGCAGCTCTGAGCTGCTGGTGCCTTCAAGCTGTTTGCCTGAGTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS CCA 90 bp ATGGTCCTATGCAGACAGGGCCTGAACAAGTCACCAGTGCTTTGTTaGCCAAGCCTCCTCCTGCCTTTTCCAGATGCCCCAAGCAATCCT +
Preference number: 5 (lower is better)
Translates to: MVLCRQGLNKSPVLC*PSLLLPFPDAPSNP
Trigger: AGGATTGCTTGGGGCATCTGGAAAAGGCAGGAGGAGGCTTGGCCAACAAAGCACTGGTGACTTGTTCAGGCCCTGTCTGCATAGGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562407.1
CDS GCA 90 bp GTGGACACTCAGTTTCTTGGTCAGAGGGAGGGAAGGTTGGAAGAATaGCTAGCAAACTGGCAGGTCATAGCCAAATGTGTCTTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: VDTQFLGQREGRLEE*LANWQVIAKCVLRG
Trigger: ACCCCGCAAGACACATTTGGCTATGACCTGCCAGTTTGCTAGGCATTCTTCCAACCTTCCCTCCCTCTGACCAAGAAACTGAGTGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 90 bp AAGCAGGGCCTTGGATATCAGGAAATGGGGAAACCAATGGTCCTATaGAGACAGGGCCTGAACAAGTCACCAGTGCTTTGTTGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: KQGLGYQEMGKPMVL*RQGLNKSPVLCWPS
Trigger: GCTTGGCCAACAAAGCACTGGTGACTTGTTCAGGCCCTGTCTGCATAGGACCATTGGTTTCCCCATTTCCTGATATCCAAGGCCCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562407.1
CDS CCA 90 bp TTTCTTGGTCAGAGGGAGGGAAGGTTGGAAGAATGCCTAGCAAACTaGCAGGTCATAGCCAAATGTGTCTTGCGGGGTTTTGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: FLGQREGRLEECLAN*QVIAKCVLRGFVWP
Trigger: AGGCCAAACAAAACCCCGCAAGACACATTTGGCTATGACCTGCCAGTTTGCTAGGCATTCTTCCAACCTTCCCTCCCTCTGACCAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 72 bp CAAACCCGCCCGCCGCGCGGCACCATGGGAGCGCCCTaGGCAGCAGCAGCCTTTAAACCCGGACCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: QTRPPRGTMGAP*AAAAFKPGPSR
Trigger: CCGGCTGGGTCCGGGTTTAAAGGCTGCTGCTGCGCAGGGCGCTCCCATGGTGCCGCGCGGCGGGCGGGTTTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 72 bp GCAGTCACTGCAGCACTCATGCTCCCGAAGCTGCGCTaGAGACCTCGATCCGAGCAGAGCCTCCGCACCGCT +
Preference number: 6 (lower is better)
Translates to: AVTAALMLPKLR*RPRSEQSLRTA
Trigger: AGCGGTGCGGAGGCTCTGCTCGGATCGAGGTCTGCAGCGCAGCTTCGGGAGCATGAGTGCTGCAGTGACTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS TCA 72 bp CGGAAGCTCCGAGTCCCCAGCACCAGATCCCTTTCCTaGCTCGTATCTCCCCCGGAAGGCCCGAAGTCTGGC +
Preference number: 6 (lower is better)
Translates to: RKLRVPSTRSLS*LVSPPEGPKSG
Trigger: GCCAGACTTCGGGCCTTCCGGGGGAGATACGAGTCAGGAAAGGGATCTGGTGCTGGGGACTCGGAGCTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 72 bp TCCCTGCAGTCACTGCAGCACTCATGCTCCCGAAGCTaGGCTGCAGACCTCGATCCGAGCAGAGCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: SLQSLQHSCSRS*AADLDPSRASA
Trigger: TGCGGAGGCTCTGCTCGGATCGAGGTCTGCAGCGCAGCTTCGGGAGCATGAGTGCTGCAGTGACTGCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS GCA 72 bp ACTCTTTCCAGCAGCTCCAGGTCTGGGCGCTCCAACTaGCCCGCAGGCAGTTCCAGTTCCCCAGCAGCGACA +
Preference number: 6 (lower is better)
Translates to: TLSSSSRSGRSN*PAGSSSSPAAT
Trigger: TGTCGCTGCTGGGGAACTGGAACTGCCTGCGGGGCAGTTGGAGCGCCCAGACCTGGAGCTGCTGGAAAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS GCA 72 bp GAGCCGCTCACTCCACATTCAACCCACATGGGCCACTaGCAGGCATGCGGAGCCTACCCCAGCTCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: EPLTPHSTHMGH*QACGAYPSSLL
Trigger: CAGGAGAGAGCTGGGGTAGGCTCCGCATGCCTGGCAGTGGCCCATGTGGGTTGAATGTGGAGTGAGCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564794.1
CDS CCA 72 bp GATTTAAAATCCAAACCCGCCCGCCGCGCGGCACCATaGGAGCGCCCTGCGCAGCAGCAGCCTTTAAACCCG +
Preference number: 6 (lower is better)
Translates to: DLKSKPARRAAP*ERPAQQQPLNP
Trigger: CGGGTTTAAAGGCTGCTGCTGCGCAGGGCGCTCCCATGGTGCCGCGCGGCGGGCGGGTTTGGATTTTAAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS TCA 72 bp CCGTGGCCTCTGACCCAACGGTGTGGCCCTGCAGGATaGCCTGCCACTCAGGCAAACAGCTTGAAGGCACCA +
Preference number: 6 (lower is better)
Translates to: PWPLTQRCGPAG*PATQANSLKAP
Trigger: TGGTGCCTTCAAGCTGTTTGCCTGAGTGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS GCA 72 bp GCCTCTGACCCAACGGTGTGGCCCTGCAGGATGACCTaGCACTCAGGCAAACAGCTTGAAGGCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASDPTVWPCRMT*HSGKQLEGTSS
Trigger: GCTGCTGGTGCCTTCAAGCTGTTTGCCTGAGTGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS CCA 72 bp CTGATTGACACGGACGCCCGAACACGTGGGATAGCCTaGGAAACCAAACCCGGCGTGGATGCGGAGACCCAG +
Preference number: 6 (lower is better)
Translates to: LIDTDARTRGIA*ETKPGVDAETQ
Trigger: CTGGGTCTCCGCATCCACGCCGGGTTTGGTTTCCCAGGCTATCCCACGTGTTCGGGCGTCCGTGTCAATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CCA 72 bp CACCGCTCCGCTCCTCCCCGAATTCAAACGCGGCGCTaGGAACGTTACAAAAGCCTGCGCGCCACTGATTGG +
Preference number: 6 (lower is better)
Translates to: HRSAPPRIQTRR*ERYKSLRATDW
Trigger: CCAATCAGTGGCGCGCAGGCTTTTGTAACGTTCCCAGCGCCGCGTTTGAATTCGGGGAGGAGCGGAGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CCA 72 bp GTGATCCTGAGCCGCTCACTCCACATTCAACCCACATaGGCCACTGCCAGGCATGCGGAGCCTACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VILSRSLHIQPT*ATARHAEPTPA
Trigger: AGCTGGGGTAGGCTCCGCATGCCTGGCAGTGGCCCATGTGGGTTGAATGTGGAGTGAGCGGCTCAGGATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564794.1
CDS TCA 72 bp GCCTTTAAACCCGGACCCAGCCGGGGAAAACCTGATTaGCACGGACGCCCGAACACGTGGGATAGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: AFKPGPSRGKPD*HGRPNTWDSLG
Trigger: TCCCAGGCTATCCCACGTGTTCGGGCGTCCGTGTCAATCAGGTTTTCCCCGGCTGGGTCCGGGTTTAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 72 bp CCCTTCTCTAGCAGCTCCAAGTCCCAGGCTCTCCCTTaGTGGGTACTCTTTCCAGCAGCTCCAGGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: PFSSSSKSQALP*WVLFPAAPGLG
Trigger: GCCCAGACCTGGAGCTGCTGGAAAGAGTACCCAGCAAGGGAGAGCCTGGGACTTGGAGCTGCTAGAGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS TCA 72 bp ACTGTGAGGCAACAGATCTTCAGAAGCCGTGGCCTCTaGCCCAACGGTGTGGCCCTGCAGGATGACCTGCCA +
Preference number: 6 (lower is better)
Translates to: TVRQQIFRSRGL*PNGVALQDDLP
Trigger: TGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGCCACGGCTTCTGAAGATCTGTTGCCTCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS GCA 72 bp CCCCATTCCTTCTCCAGCACAGCGGCATCTGGACCCTaGCTTAACACTGTCCACAACCATTCGCAGCACCCC +
Preference number: 6 (lower is better)
Translates to: PHSFSSTAASGP*LNTVHNHSQHP
Trigger: GGGGTGCTGCGAATGGTTGTGGACAGTGTTAAGGCAGGGTCCAGATGCCGCTGTGCTGGAGAAGGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 72 bp TCAGAAGCCGTGGCCTCTGACCCAACGGTGTGGCCCTaGAGGATGACCTGCCACTCAGGCAAACAGCTTGAA +
Preference number: 6 (lower is better)
Translates to: SEAVASDPTVWP*RMTCHSGKQLE
Trigger: TTCAAGCTGTTTGCCTGAGTGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGCCACGGCTTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS CCA 72 bp TTCTCTAGCAGCTCCAAGTCCCAGGCTCTCCCTTGCTaGGTACTCTTTCCAGCAGCTCCAGGTCTGGGCGCT +
Preference number: 6 (lower is better)
Translates to: FSSSSKSQALPC*VLFPAAPGLGA
Trigger: AGCGCCCAGACCTGGAGCTGCTGGAAAGAGTACCCAGCAAGGGAGAGCCTGGGACTTGGAGCTGCTAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562272.5
ENST00000570220.5
CDS CCA 72 bp AGATCTTCAGAAGCCGTGGCCTCTGACCCAACGGTGTaGCCCTGCAGGATGACCTGCCACTCAGGCAAACAG +
Preference number: 6 (lower is better)
Translates to: RSSEAVASDPTV*PCRMTCHSGKQ
Trigger: CTGTTTGCCTGAGTGGCAGGTCATCCTGCAGGGCCACACCGTTGGGTCAGAGGCCACGGCTTCTGAAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564947.1
CDS CAA 72 bp ATGCAGACAGGGCCTGAACAAGTCACCAGTGCTTTGTaGGCCAAGCCTCCTCCTGCCTTTTCCAGATGCCCC +
Preference number: 6 (lower is better)
Translates to: MQTGPEQVTSAL*AKPPPAFSRCP
Trigger: GGGGCATCTGGAAAAGGCAGGAGGAGGCTTGGCCAACAAAGCACTGGTGACTTGTTCAGGCCCTGTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562407.1
CDS TCA 72 bp ACCTCGGGGCCAGGGAACAGTAGCATCGCCATCACCTaGGAGCTTGTTAGAACCGCAAAGGCAAACGTTCAG +
Preference number: 6 (lower is better)
Translates to: TSGPGNSSIAIT*ELVRTAKANVQ
Trigger: CTGAACGTTTGCCTTTGCGGTTCTAACAAGCTCTCAGGTGATGGCGATGCTACTGTTCCCTGGCCCCGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS TCA 72 bp CCTCGCGTCCAGAAGCTGACTTCCCTATCAGCAACATaGCTCAGACTCCACTTCACTGGAACCCCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: PRVQKLTSLSAT*LRLHFTGTPSS
Trigger: AGAGGAGGGGGTTCCAGTGAAGTGGAGTCTGAGTCATGTTGCTGATAGGGAAGTCAGCTTCTGGACGCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CAA 72 bp GGCCAGGGAACAGTAGCATCGCCATCACCTGAGAGCTaGTTAGAACCGCAAAGGCAAACGTTCAGGCCCTAC +
Preference number: 6 (lower is better)
Translates to: GQGTVASPSPES*LEPQRQTFRPY
Trigger: GTAGGGCCTGAACGTTTGCCTTTGCGGTTCTAACAAGCTCTCAGGTGATGGCGATGCTACTGTTCCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CAA 90 bp ACCAATGGTCCTATGCAGACAGGGCCTGAACAAGTCACCAGTGCTTaGTTGGCCAAGCCTCCTCCTGCCTTTTCCAGATGCCCCAAGCAA +
Preference number: 6 (lower is better)
Translates to: TNGPMQTGPEQVTSA*LAKPPPAFSRCPKQ
Trigger: TTGCTTGGGGCATCTGGAAAAGGCAGGAGGAGGCTTGGCCAACAAAGCACTGGTGACTTGTTCAGGCCCTGTCTGCATAGGACCATTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562407.1
CDS GCA 72 bp TTTCTCGGGCGTCCGGGAAAGCTCCTGCGGTTCACTTaGGCCTCCTCCAGGAAGCTTTTACTTAAATCTTCC +
Preference number: 6 (lower is better)
Translates to: FLGRPGKLLRFT*ASSRKLLLKSS
Trigger: GGAAGATTTAAGTAAAAGCTTCCTGGAGGAGGCGCAAGTGAACCGCAGGAGCTTTCCCGGACGCCCGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS TCA 72 bp CAGGCTGTCACCATCATTGTAGAGGATGAGGCGTGTTaGGTCATTGAAGAGCACCCCCACGCTGTTATCACA +
Preference number: 6 (lower is better)
Translates to: QAVTIIVEDEAC*VIEEHPHAVIT
Trigger: TGTGATAACAGCGTGGGGGTGCTCTTCAATGACTCAACACGCCTCATCCTCTACAATGATGGTGACAGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300093.9
ENST00000562272.5
ENST00000564794.1
CDS TCA 72 bp CGAGTCAGTGTCCGCCTCTCAACAAGACTGCTCAGGTaGTTCCTACACATCCTGAAGTTGGAGAAGCACAGT +
Preference number: 6 (lower is better)
Translates to: RVSVRLSTRLLR*FLHILKLEKHS
Trigger: ACTGTGCTTCTCCAACTTCAGGATGTGTAGGAATCACCTGAGCAGTCTTGTTGAGAGGCGGACACTGACTCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CCA 72 bp CAGAGGGAGGGAAGGTTGGAAGAATGCCTAGCAAACTaGCAGGTCATAGCCAAATGTGTCTTGCGGGGTTTT +
Preference number: 6 (lower is better)
Translates to: QREGRLEECLAN*QVIAKCVLRGF
Trigger: AAAACCCCGCAAGACACATTTGGCTATGACCTGCCAGTTTGCTAGGCATTCTTCCAACCTTCCCTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS GCA 72 bp CTTGGATATCAGGAAATGGGGAAACCAATGGTCCTATaGAGACAGGGCCTGAACAAGTCACCAGTGCTTTGT +
Preference number: 6 (lower is better)
Translates to: LGYQEMGKPMVL*RQGLNKSPVLC
Trigger: ACAAAGCACTGGTGACTTGTTCAGGCCCTGTCTGCATAGGACCATTGGTTTCCCCATTTCCTGATATCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562407.1
CDS CAA 72 bp TGCTTTCAGTTTGCCACAGTTTACAGCTACACCCGTTaGTTCTGTAGGTACTTGAGTGGCAACCCTGGAACA +
Preference number: 6 (lower is better)
Translates to: CFQFATVYSYTR*FCRYLSGNPGT
Trigger: TGTTCCAGGGTTGCCACTCAAGTACCTACAGAACAAACGGGTGTAGCTGTAAACTGTGGCAAACTGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CAA 90 bp GTGCCTACATGCTTTCAGTTTGCCACAGTTTACAGCTACACCCGTTaGTTCTGTAGGTACTTGAGTGGCAACCCTGGAACAGTAAAATAC +
Preference number: 6 (lower is better)
Translates to: VPTCFQFATVYSYTR*FCRYLSGNPGTVKY
Trigger: GTATTTTACTGTTCCAGGGTTGCCACTCAAGTACCTACAGAACAAACGGGTGTAGCTGTAAACTGTGGCAAACTGAAAGCATGTAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CAA 72 bp ACAGTTTACAGCTACACCCGTTTGTTCTGTAGGTACTaGAGTGGCAACCCTGGAACAGTAAAATACCCACGT +
Preference number: 6 (lower is better)
Translates to: TVYSYTRLFCRY*SGNPGTVKYPR
Trigger: ACGTGGGTATTTTACTGTTCCAGGGTTGCCACTCAAGTACCTACAGAACAAACGGGTGTAGCTGTAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562272.5
CDS CAA 72 bp TCTTCCGAAAGAAAAATTCTCTTAGCTACCACTGCTTaGGGGAAACTGAATCAGTGCCTGGTTACTAGAGCA +
Preference number: 6 (lower is better)
Translates to: SSERKILLATTA*GKLNQCLVTRA
Trigger: TGCTCTAGTAACCAGGCACTGATTCAGTTTCCCCAAAGCAGTGGTAGCTAAGAGAATTTTTCTTTCGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564947.1