RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLIN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000167676

Ensembl transcript IDs: ENST00000301286.4, ENST00000633942.1

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGGCACGTCTCACACCCGACCTGAGCCTGCCAGCCTCCACGACCTaGGCTAGCCTGAGAGCACGGGGCCCGGCGGCCGGGTCCGCCACC +
Preference number: 1 (lower is better)
Translates to: TARLTPDLSLPASTT*ASLRARGPAAGSAT
Trigger: GGTGGCGGACCCGGCCGCCGGGCCCCGTGCTCTCAGGCTAGCCCAGGTCGTGGAGGCTGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp AGGGTGGAGACCAGGCCTTCCCTGAGAGCCGCTGCTAGCCGACAGTaGTCTCCAGCGTTCAGGGAGCATGGGCCTCAGGGGCCAGCCTCG +
Preference number: 1 (lower is better)
Translates to: RVETRPSLRAAASRQ*SPAFREHGPQGPAS
Trigger: CGAGGCTGGCCCCTGAGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAGGGAAGGCCTGGTCTCCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 90 bp GAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCCTGGGATaGCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTG +
Preference number: 1 (lower is better)
Translates to: ETHFQHENGAARSLG*HSTACTADSWGPVL
Trigger: CAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATCCCAGGCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp GGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCTTCCTaGGGAGGCCGGGCTGAACGGCTCCTCCCCGCTGGACTGAGCGCA +
Preference number: 1 (lower is better)
Translates to: GTTRFSYRVSGDMAS*GGRAERLLPAGLSA
Trigger: TGCGCTCAGTCCAGCGGGGAGGAGCCGTTCAGCCCGGCCTCCCCAGGAAGCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp GGGGGCCTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTaGGACTGGGTTGAGCCATCAGGCCACCGTGAGAAGCGACTAAAA +
Preference number: 1 (lower is better)
Translates to: GGLSWGAGGSVTGPV*DWVEPSGHREKRLK
Trigger: TTTTAGTCGCTTCTCACGGTGGCCTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp GCCCGGAGCCTGGGATGCCACAGCACTGCCTGCACCGCTGATAGCTaGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATATAAA +
Preference number: 1 (lower is better)
Translates to: ARSLGCHSTACTADS*GPVLQDWKSPARYK
Trigger: TTTATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATCCCAGGCTCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp GCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGTAAGAATTAGGCTGTaGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGG +
Preference number: 1 (lower is better)
Translates to: AQRSRVASVPVRIRL*CGGKGLPELRPHAW
Trigger: CCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTCTTACTGGGACGGAGGCAACTCGGCTACGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTaGGTTGAGCCATCAGGCCACCGTGAGAAGCGACTAAAAGGCACT +
Preference number: 1 (lower is better)
Translates to: LSWGAGGSVTGPVWD*VEPSGHREKRLKGT
Trigger: AGTGCCTTTTAGTCGCTTCTCACGGTGGCCTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 90 bp GTCACGTGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTaGTCATTCCACAGTGGCGTCTCGTGTTTGTCGTCCTGCCCAGCG +
Preference number: 1 (lower is better)
Translates to: VTWARSQASHPVLRS*SFHSGVSCLSSCPA
Trigger: CGCTGGGCAGGACGACAAACACGAGACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCACGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR TCA 90 bp CTGTGCCATAGGCACGCAGCCTCTGTGGCTGTTCCCAGCCCTGTCTaGTCCCTCCATAGGGCACAGTTCCCTGCGGGGAAGTCCTTTGTC +
Preference number: 1 (lower is better)
Translates to: LCHRHAASVAVPSPV*SLHRAQFPAGKSFV
Trigger: GACAAAGGACTTCCCCGCAGGGAACTGTGCCCTATGGAGGGATCAGACAGGGCTGGGAACAGCCACAGAGGCTGCGTGCCTATGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp CTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTaGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTGATTTCTGCA +
Preference number: 1 (lower is better)
Translates to: LWCGGKGLPELRPHA*LAGRELQSLCLISA
Trigger: TGCAGAAATCAGGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTaGAGGACTGGAAGAGCCCTGCTAGATATAAAAGGGTTGCTAGCG +
Preference number: 1 (lower is better)
Translates to: DATALPAPLIAGGPC*RTGRALLDIKGLLA
Trigger: CGCTAGCAACCCTTTTATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 90 bp GTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTaGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCT +
Preference number: 1 (lower is better)
Translates to: VPSKSPRAPKLLIPQ*RLVFVVLPSVAELP
Trigger: AGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR TCA 90 bp GGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTaGTTTCTGCAAATGGCTGTGTCTGGCATCCTAGCCTCCGATGGC +
Preference number: 1 (lower is better)
Translates to: GPMLGWLDVSCSHCA*FLQMAVSGILASDG
Trigger: GCCATCGGAGGCTAGGATGCCAGACACAGCCATTTGCAGAAATCAGGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 90 bp TGGGATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTaGTGCAGGACTGGAAGAGCCCTGCTAGATATAAAAGGGTTGCTA +
Preference number: 1 (lower is better)
Translates to: WDATALPAPLIAGGP*CRTGRALLDIKGLL
Trigger: TAGCAACCCTTTTATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 90 bp CTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTaGCTGATTTCTGCAAATGGCTGTGTCTGGCATCCTAGCCTCCGA +
Preference number: 1 (lower is better)
Translates to: LRPHAWLAGRELQSL*LISANGCVWHPSLR
Trigger: TCGGAGGCTAGGATGCCAGACACAGCCATTTGCAGAAATCAGGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 90 bp CATAAGGGGCTGTCACGTGGGCACGGTCCCAAGCAAGTCACCCCGTaGTCCGAAGTTGCTCATTCCACAGTGGCGTCTCGTGTTTGTCGT +
Preference number: 1 (lower is better)
Translates to: HKGLSRGHGPKQVTP*SEVAHSTVASRVCR
Trigger: ACGACAAACACGAGACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCACGTGACAGCCCCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGCTGGGGAGGCCGGGCTaGACGGCTCCTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQLGRPG*TAPPRW
Trigger: CCAGCGGGGAGGAGCCGTTCAGCCCGGCCTCCCCAG...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCGACCTGGGCTAGCCTaGGAGCACGGGGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWRPGLA*EHGARR
Trigger: CCGCCGGGCCCCGTGCTCTCAGGCTAGCCCAGGTCG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCATGCACCGCTGATAGCTaGGGGCCCGTGCTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: EHGARRPGPPPPVSLMPACTADS*GPVLQD
Trigger: GTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCA...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCCGACCTGGGCTAGCCTaGGAGCACGGGGCCCGGCGG +
Preference number: 2 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCARPGLA*EHGARR
Trigger: CCGCCGGGCCCCGTGCTCTCAGGCTAGCCCAGGTCG...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGGCTGCTGTGGCTCCTaGCAGCTTTGTCCCCACCGT +
Preference number: 2 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAGCCGS*QLCPHR
Trigger: ACGGTGGGGACAAAGCTGCCAGGAGCCACAGCAGCC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGCGCTTGGGTGGGCCTaGGGACCCAGGGGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRALGWA*GPRGSV
Trigger: CACACTCCCCCTGGGTCCTCAGGCCCACCCAAGCGC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGTCACGGCCCGTCACCTaGGGCAGTCCTTGCCGTGCC +
Preference number: 2 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQSRPVT*GSPCRA
Trigger: GGCACGGCAAGGACTGCCTCAGGTGACGGGCCGTGA...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGTCCGCGAGGCTAGGCTaGGAGGGTGGAGACCAGGCC +
Preference number: 2 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVESARLG*EGGDQA
Trigger: GGCCTGGTCTCCACCCTCCCAGCCTAGCCTCGCGGA...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGGCTGGTGGTCTGAGTaGCCCCAGGCTCCGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWGWWSE*PQAPRG
Trigger: CCCTCTCGGAGCCTGGGGTCACTCAGACCACCAGCC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGCTTGGGAAGGCTCCTaGCCCGTCCCCTCTCACGGC +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRAWEGS*PVPSHG
Trigger: GCCGTGAGAGGGGACGGGTCAGGAGCCTTCCCAAGC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGCAGCCCCGCTTCCTCTaGAGCCCGGCGCTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTQPRFL*SPALGW
Trigger: CCACCCAAGCGCCGGGCTGCAGAGGAAGCGGGGCTG...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGGCATCTAAGCTGTGCTaGCTGCGCCCTGCCCCGCAC +
Preference number: 2 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEASKLC*LRPAPH
Trigger: GTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGC...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGAGGGCATCTAAGCTGTaGTGCCTGCGCCCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVERASKL*CLRPAP
Trigger: CGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCT...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGAGGCAGCTCCTCCCTaGACAGAGCAGGGCGACCCC +
Preference number: 2 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWEAAPP*TEQGDP
Trigger: GGGGTCGCCCTGCTCTGTCCAGGGAGGAGCTGCCTC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTCTGCAGCCCGGCGCTTaGGTGGGCCTGAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: LRAAASRQWSPAFREHGPLQPGA*VGLRTQ
Trigger: CTGGGTCCTCAGGCCCACCCAAGCGCCGGGCTGCAG...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCACGGCTCCTCCCCGCTaGACTGAGCGCAGCCACGGC +
Preference number: 2 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCATAPPR*TERSHG
Trigger: GCCGTGGCTGCGCTCAGTCCAGCGGGGAGGAGCCGT...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGCACACGGTGACCCCTaGGGCCCCTCCACCCTTCCT +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRAHGDP*GPSTLP
Trigger: AGGAAGGGTGGAGGGGCCCCAGGGGTCACCGTGTGC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTCACGGCCCGTCACCTaGGGCAGTCCTTGCCGTGCC +
Preference number: 2 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCASRPVT*GSPCRA
Trigger: GGCACGGCAAGGACTGCCTCAGGTGACGGGCCGTGA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAAGACCAGGCCTTCCCTaGGAGCCGCTGCTAGCCGAC +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRRPGLP*EPLLAD
Trigger: GTCGGCTAGCAGCGGCTCTCAGGGAAGGCCTGGTCT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGGACCCAGGGGGAGTGTaGGGCGGAGGAAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQDPGGV*GGGRAV
Trigger: CACAGCCCTTCCTCCGCCGCACACTCCCCCTGGGTC...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCACCCGTGCTGCAGGACTaGAAGAGCCCTGCTAGATAT +
Preference number: 2 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAPVLQD*KSPARY
Trigger: ATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGG...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCCAGCCTCCACGACCTaGGCTAGCCTGAGAGCACGG +
Preference number: 2 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWPASTT*ASLRAR
Trigger: CCGTGCTCTCAGGCTAGCCCAGGTCGTGGAGGCTGG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACCATGGGTGTCGGGCTaGGGAGAAGGCTTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRPWVSG*GEGLGR
Trigger: CCTTCCCAAGCCTTCTCCTCAGCCCGACACCCATGG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAAGCGGGGCAAACAGATaGCCTTCCAGGCTGGGCACG +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRSGANR*PSRLGT
Trigger: CGTGCCCAGCCTGGAAGGGCATCTGTTTGCCCCGCT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGATAGCTGGGGGCCCGTaGTGCAGGACTGGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWIAGGP*CRTGRA
Trigger: GGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTAT...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCACCACCCCCTGCAAACTaGTCAGTCTCAAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PAGLSAATARLTPDLSLPPPPAN*SVSSQA
Trigger: AGCCTGGCTTGAGACTGAGCAGTTTGCAGGGGGTGG...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGCGGAGGAAGGGCTGTaGCATAGGCACGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWAEEGL*HRHAAS
Trigger: AGAGGCTGCGTGCCTATGGCACAGCCCTTCCTCCGC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGAGGCAGTCCTTGCCGTaGCAGCTTCCCCGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQRQSLP*QLPRFR
Trigger: TCTGAACCGGGGAAGCTGGCACGGCAAGGACTGCCT...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGCCAGCCTCCACGACCTaGGCTAGCCTGAGAGCACGG +
Preference number: 2 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTPASTT*ASLRAR
Trigger: CCGTGCTCTCAGGCTAGCCCAGGTCGTGGAGGCTGG...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGGGGGATATGGCTTCCTaGGGAGGCCGGGCTGAACGG +
Preference number: 2 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTGDMAS*GGRAER
Trigger: CCGTTCAGCCCGGCCTCCCCAGGAAGCCATATCCCC...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCGCTGGGGGCCCGTGCTaGAGGACTGGAAGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: CVLRPETHFQHENGAARSAGGPC*RTGRAL
Trigger: CAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGC...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCATAGCTGGGGGCCCGTaGTGCAGGACTGGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAIAGGP*CRTGRA
Trigger: GGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTAT...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTGCCACAGCACTGCCTaGACCGCTGATAGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCACHSTA*TADSWG
Trigger: CCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGGGCACGCAGCCTCTGTaGCTGTTCCCAGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQGTQPL*LFPALS
Trigger: AGACAGGGCTGGGAACAGCCACAGAGGCTGCGTGCC...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCACCAGGCTGGGCACGCTaGTTTTTCTCTTTCCTAATT +
Preference number: 2 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAPGWAR*FFSFLI
Trigger: AATTAGGAAAGAGAAAAAGCAGCGTGCCCAGCCTGG...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGCTGGGGGCCCGTGCTaGAGGACTGGAAGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: WARSQASHPVLRSCSFHSAGGPC*RTGRAL
Trigger: CAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCATGCCACAGCACTGCCTaGACCGCTGATAGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPCHSTA*TADSWG
Trigger: CCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCA...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGGAACCGATCCAGGTTTaGGGGCGGGGAGAAAGTTCT +
Preference number: 2 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEEPIQV*GRGESS
Trigger: AGAACTTTCTCCCCGCCCCCAAACCTGGATCGGTTC...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGTGGGTCTGGGGTTCCTaGGCTCGTGTCCTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQWVWGS*ARVLGE
Trigger: CTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCA...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGCGGGGAGAAAGTTCTaGGGCAGCTCCTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLAGRKF*GSSSLD
Trigger: GTCCAGGGAGGAGCTGCCTCAGAACTTTCTCCCCGC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGGTTCTCTTACCGGGTaGGTGGGGATATGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWGSLTG*VGIWLP
Trigger: AGGAAGCCATATCCCCACTCACCCGGTAAGAGAACC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCCAGCCCCGCTTCCTCTaGAGCCCGGCGCTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGQPRFL*SPALGW
Trigger: CCACCCAAGCGCCGGGCTGCAGAGGAAGCGGGGCTG...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACCCGTGCTGCAGGACTaGAAGAGCCCTGCTAGATAT +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRPVLQD*KSPARY
Trigger: ATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGGCTGCTGTGGCTCCTaGCAGCTTTGTCCCCACCGT +
Preference number: 2 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHGCCGS*QLCPHR
Trigger: ACGGTGGGGACAAAGCTGCCAGGAGCCACAGCAGCC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTAGTCTCAAGCCAGGCTaGTGCAAAGCCCCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: LRAAASRQWSPAFREHGPSLKPG*CKAPAV
Trigger: CACAGCTGGGGCTTTGCACCAGCCTGGCTTGAGACT...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCTCTTACCGGGTGAGTaGGGATATGGCTTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQLLPGE*GYGFLG
Trigger: CCCCAGGAAGCCATATCCCCACTCACCCGGTAAGAG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGGGCCCCATGCTTGGTTaGCTGGACGTGAGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLGPMLG*LDVSCS
Trigger: ACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCC...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CAA 90 bp GGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATATAAAAGGGTaGCTAGCGGGGCAAACAGATGCCCTTCCAGGCTGGGCACGCTGC +
Preference number: 2 (lower is better)
Translates to: GPCCRTGRALLDIKG*LAGQTDALPGWARC
Trigger: GCAGCGTGCCCAGCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CAA 90 bp TGTCACGTGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTaGCTCATTCCACAGTGGCGTCTCGTGTTTGTCGTCCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: CHVGTVPSKSPRAPK*LIPQWRLVFVVLPS
Trigger: GCTGGGCAGGACGACAAACACGAGACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCACGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCGGCTGGTGGTCTGAGTaGCCCCAGGCTCCGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGGWWSE*PQAPRG
Trigger: CCCTCTCGGAGCCTGGGGTCACTCAGACCACCAGCC...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGACCCACTTTCAGCATaGGAACGGAGCTGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHDPLSA*ERSCPE
Trigger: CTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCGGTTCTCTTACCGGGTaGGTGGGGATATGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAGSLTG*VGIWLP
Trigger: AGGAAGCCATATCCCCACTCACCCGGTAAGAGAACC...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACAGGCAGTCCTTGCCGTaGCAGCTTCCCCGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHRQSLP*QLPRFR
Trigger: TCTGAACCGGGGAAGCTGGCACGGCAAGGACTGCCT...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCATACTATGAGGGAATGTaGTTCTTAAGACCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAYYEGM*FLRPSR
Trigger: CCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTA...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCTCTTACCGGGTGAGTaGGGATATGGCTTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLLLPGE*GYGFLG
Trigger: CCCCAGGAAGCCATATCCCCACTCACCCGGTAAGAG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGTGTCCTAGGAGAGCATaGAAAGGGGACGACAAGGTT +
Preference number: 2 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVECPRRA*KGDDKV
Trigger: AACCTTGTCGTCCCCTTTCCATGCTCTCCTAGGACA...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACCCACCCCCTGCAAACTaGTCAGTCTCAAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHPPPAN*SVSSQA
Trigger: AGCCTGGCTTGAGACTGAGCAGTTTGCAGGGGGTGG...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAATTGCAGTGCTTGCTTaGGGACTTCAAGGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRIAVLA*GLQGKA
Trigger: AGCCTTCCCTTGAAGTCCCCAAGCAAGCACTGCAAT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCGCGGAGGAAGGGCTGTaGCATAGGCACGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGAEEGL*HRHAAS
Trigger: AGAGGCTGCGTGCCTATGGCACAGCCCTTCCTCCGC...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAACTGTGCCTGATTTCTaGAAATGGCTGTGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRTVPDF*KWLCLA
Trigger: TGCCAGACACAGCCATTTGCAGAAATCAGGCACAGT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGAAGCAAGTCACCCCGTaGTCCGAAGTTGCTCATTCC +
Preference number: 2 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLKQVTP*SEVAHS
Trigger: GGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTT...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTTTCTCTTTCCTCCTCTaGATAAGGGGCTGTCACGTG +
Preference number: 2 (lower is better)
Translates to: LRAAASRQWSPAFREHGPFSFLL*IRGCHV
Trigger: CACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAA...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCCTAATTGCAGTGCTTaGTTGGGGACTTCAAGGGAA +
Preference number: 2 (lower is better)
Translates to: APLIAGGPCCRTGRALLDPNCSA*LGTSRE
Trigger: TTCCCTTGAAGTCCCCAAGCAAGCACTGCAATTAGG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGCAAATGGCTGTGTCTaGCATCCTAGCCTCCGATGG +
Preference number: 2 (lower is better)
Translates to: WARSQASHPVLRSCSFHSANGCV*HPSLRW
Trigger: CCATCGGAGGCTAGGATGCCAGACACAGCCATTTGC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACTTGCTCATTCCACAGTaGCGTCTCGTGTTTGTCGTC +
Preference number: 2 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHLLIPQ*RLVFVV
Trigger: GACGACAAACACGAGACGCCACTGTGGAATGAGCAA...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACCCAGGCTGGGCACGCTaGTTTTTCTCTTTCCTAATT +
Preference number: 2 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHPGWAR*FFSFLI
Trigger: AATTAGGAAAGAGAAAAAGCAGCGTGCCCAGCCTGG...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCGAACCGATCCAGGTTTaGGGGCGGGGAGAAAGTTCT +
Preference number: 2 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGEPIQV*GRGESS
Trigger: AGAACTTTCTCCCCGCCCCCAAACCTGGATCGGTTC...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGTACTATGAGGGAATGTaGTTCTTAAGACCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQYYEGM*FLRPSR
Trigger: CCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTA...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGAGGCAGCTCCTCCCTaGACAGAGCAGGGCGACCCC +
Preference number: 2 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCEAAPP*TEQGDP
Trigger: GGGGTCGCCCTGCTCTGTCCAGGGAGGAGCTGCCTC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCATTGCAGTGCTTGCTTaGGGACTTCAAGGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGIAVLA*GLQGKA
Trigger: AGCCTTCCCTTGAAGTCCCCAAGCAAGCACTGCAAT...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR TCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGCGGGGAGAAAGTTCTaGGGCAGCTCCTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCAGRKF*GSSSLD
Trigger: GTCCAGGGAGGAGCTGCCTCAGAACTTTCTCCCCGC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR GCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCCCTAATTGCAGTGCTTaGTTGGGGACTTCAAGGGAA +
Preference number: 2 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGPNCSA*LGTSRE
Trigger: TTCCCTTGAAGTCCCCAAGCAAGCACTGCAATTAGG...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGCCCGGAGCAGGGCGTaGGGTGGCTCAGTTAAGAAG +
Preference number: 2 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCARSRA*GGSVKK
Trigger: CTTCTTAACTGAGCCACCCCACGCCCTGCTCCGGGC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR TCA 72 bp CCCCGCTTCCTCTGCAGCCCGGCGCTTGGGTGGGCCTaGGGACCCAGGGGGAGTGTGCGGCGGAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: PRFLCSPALGWA*GPRGSVRRRKG
Trigger: GCCCTTCCTCCGCCGCACACTCCCCCTGGGTCCTCAGGCCCACCCAAGCGCCGGGCTGCAGAGGAAGCGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 72 bp CTCACACCCGACCTGAGCCTGCCAGCCTCCACGACCTaGGCTAGCCTGAGAGCACGGGGCCCGGCGGCCGGG +
Preference number: 3 (lower is better)
Translates to: LTPDLSLPASTT*ASLRARGPAAG
Trigger: CCCGGCCGCCGGGCCCCGTGCTCTCAGGCTAGCCCAGGTCGTGGAGGCTGGCAGGCTCAGGTCGGGTGTGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGTCTGCAGCCCGGCGCTaGGGTGGGCCTGAGGACCCA +
Preference number: 3 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWSAARR*GGPEDP
Trigger: TGGGTCCTCAGGCCCACCCAAGCGCCGGGCTGCAGA...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTCTGCAGCCCGGCGCTaGGGTGGGCCTGAGGACCCA +
Preference number: 3 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCASAARR*GGPEDP
Trigger: TGGGTCCTCAGGCCCACCCAAGCGCCGGGCTGCAGA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCATTCAAGGGAAGGCTCTaGGCTGGTGGTCTGAGTGAC +
Preference number: 3 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAFKGRL*AGGLSD
Trigger: GTCACTCAGACCACCAGCCAAGAGCCTTCCCTTGAA...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCACTGCGGGGAAGTCCTTaGTCTGTGTTCTCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: PAGLSAATARLTPDLSLPLRGSP*SVFSRG
Trigger: GCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAG...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 72 bp CTGGGATGCCACAGCACTGCCTGCACCGCTGATAGCTaGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCT +
Preference number: 3 (lower is better)
Translates to: LGCHSTACTADS*GPVLQDWKSPA
Trigger: AGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 72 bp ACCAGGCCTTCCCTGAGAGCCGCTGCTAGCCGACAGTaGTCTCCAGCGTTCAGGGAGCATGGGCCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: TRPSLRAAASRQ*SPAFREHGPQG
Trigger: CCCCTGAGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAGGGAAGGCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 72 bp AGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTaGGACTGGGTTGAGCCATCAGGCCACCGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: SWGAGGSVTGPV*DWVEPSGHREK
Trigger: CTTCTCACGGTGGCCTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCGGCCCCATGCTTGGTaGGCTGGACGTGAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQRPHAW*AGRELQ
Trigger: CTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 72 bp AGGAGACAAGAGGGACAAACCAGGGCATCTAAGCTGTaGTGCCTGCGCCCTGCCCCGCACCCACGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: RRQEGQTRASKL*CLRPAPHPRGW
Trigger: CCAGCCTCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCCCTCTTGTCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 72 bp AGGTTCTCTTACCGGGTGAGTGGGGATATGGCTTCCTaGGGAGGCCGGGCTGAACGGCTCCTCCCCGCTGGA +
Preference number: 3 (lower is better)
Translates to: RFSYRVSGDMAS*GGRAERLLPAG
Trigger: TCCAGCGGGGAGGAGCCGTTCAGCCCGGCCTCCCCAGGAAGCCATATCCCCACTCACCCGGTAAGAGAACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCTGCGGGGAAGTCCTTaGTCTGTGTTCTCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWLRGSP*SVFSRG
Trigger: GCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCGGCCCCATGCTTGGTaGGCTGGACGTGAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLRPHAW*AGRELQ
Trigger: CTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 72 bp TTTCAGCATGAGAACGGAGCTGCCCGGAGCCTGGGATaGCACAGCACTGCCTGCACCGCTGATAGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: FQHENGAARSLG*HSTACTADSWG
Trigger: CCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATCCCAGGCTCCGGGCAGCTCCGTTCTCATGCTGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 72 bp TTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTaGGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGC +
Preference number: 3 (lower is better)
Translates to: LGCGVAGRDFLS*GPMLGWLDVSC
Trigger: GCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTCCCCGTGCTCCGAAGTaGCTCATTCCACAGTGGCGT +
Preference number: 3 (lower is better)
Translates to: LRAAASRQWSPAFREHGPPRAPK*LIPQWR
Trigger: ACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGG...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGGGAACCGATCCAGGTTaGGGGGCGGGGAGAAAGTTC +
Preference number: 3 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLGTDPG*GAGRKF
Trigger: GAACTTTCTCCCCGCCCCCAAACCTGGATCGGTTCC...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGAATTGCAGTGCTTGCTaGGGGACTTCAAGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVENCSAC*GTSREG
Trigger: GCCTTCCCTTGAAGTCCCCAAGCAAGCACTGCAATT...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR TCA 72 bp GGTGTGTGTGCTAAGGCCGGAGACCCACTTTCAGCATaGGAACGGAGCTGCCCGGAGCCTGGGATGCCACAG +
Preference number: 3 (lower is better)
Translates to: GVCAKAGDPLSA*ERSCPEPGMPQ
Trigger: CTGTGGCATCCCAGGCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 72 bp AGCCGAGTTGCCTCCGTCCCAGTAAGAATTAGGCTGTaGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCC +
Preference number: 3 (lower is better)
Translates to: SRVASVPVRIRL*CGGKGLPELRP
Trigger: GGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTCTTACTGGGACGGAGGCAACTCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGAACCGATCCAGGTTaGGGGGCGGGGAGAAAGTTC +
Preference number: 3 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLGTDPG*GAGRKF
Trigger: GAACTTTCTCCCCGCCCCCAAACCTGGATCGGTTCC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTTCAAGGGAAGGCTCTaGGCTGGTGGTCTGAGTGAC +
Preference number: 3 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAFKGRL*AGGLSD
Trigger: GTCACTCAGACCACCAGCCAAGAGCCTTCCCTTGAA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 72 bp GCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTaGAGGACTGGAAGAGCCCTGCTAGATATAAAAGGG +
Preference number: 3 (lower is better)
Translates to: ALPAPLIAGGPC*RTGRALLDIKG
Trigger: CCCTTTTATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 72 bp CTGTCACGTGGGCACGGTCCCAAGCAAGTCACCCCGTaGTCCGAAGTTGCTCATTCCACAGTGGCGTCTCGT +
Preference number: 3 (lower is better)
Translates to: LSRGHGPKQVTP*SEVAHSTVASR
Trigger: ACGAGACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCACGTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCACTAGATATAAAAGGGTaGCTAGCGGGGCAAACAGAT +
Preference number: 3 (lower is better)
Translates to: PAGLSAATARLTPDLSLPLDIKG*LAGQTD
Trigger: ATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAG...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 72 bp GCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTaGTCATTCCACAGTGGCGTCTCGTGTTTGTCGTCC +
Preference number: 3 (lower is better)
Translates to: ARSQASHPVLRS*SFHSGVSCLSS
Trigger: GGACGACAAACACGAGACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CCA 72 bp TGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTaGAAGAGCCCTGCTAGATATAAAAGGGTTGCTAGC +
Preference number: 3 (lower is better)
Translates to: CTADSWGPVLQD*KSPARYKRVAS
Trigger: GCTAGCAACCCTTTTATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR-3UTR CAA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCTAGATATAAAAGGGTaGCTAGCGGGGCAAACAGAT +
Preference number: 3 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLLDIKG*LAGQTD
Trigger: ATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR GCA 72 bp CATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTaGCTGATTTCTGCAAATGGCTGTGTCTGGCATCCT +
Preference number: 3 (lower is better)
Translates to: HAWLAGRELQSL*LISANGCVWHP
Trigger: AGGATGCCAGACACAGCCATTTGCAGAAATCAGGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCACGACCTGGGCTAGCCTaGGAGCACGGGGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPARPGLA*EHGARR
Trigger: CCGCCGGGCCCCGTGCTCTCAGGCTAGCCCAGGTCG...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGCTCCGGGCCTACACTaGGCACATCCGGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAAPGLH*AHPGAW
Trigger: CCACGCCCCCGGATGTGCTCAGTGTAGGCCCGGAGC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCTGGGGAGGCCGGGCTaGACGGCTCCTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVELGRPG*TAPPRW
Trigger: CCAGCGGGGAGGAGCCGTTCAGCCCGGCCTCCCCAG...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGGCTCCTACAGCTACTaGCCGCCAGCGGGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAGSYSY*PPAGKA
Trigger: CGCCTTGCCCGCTGGCGGGCAGTAGCTGTAGGAGCC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGAGGCAGCTCCTCCCTaGACAGAGCAGGGCGACCCC +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAEAAPP*TEQGDP
Trigger: GGGGTCGCCCTGCTCTGTCCAGGGAGGAGCTGCCTC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCACAGGGTCCAGGCAGGTaGGCAGGTCCGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAQGPGR*AGPMWG
Trigger: TCCCCACATCGGACCTGCTCACCTGCCTGGACCCTG...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGCGGAGGAAGGGCTGTaGCATAGGCACGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAAEEGL*HRHAAS
Trigger: AGAGGCTGCGTGCCTATGGCACAGCCCTTCCTCCGC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCAGACCCAGGGGGAGTGTaGGGCGGAGGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PAGLSAATARLTPDLSLPDPGGV*GGGRAV
Trigger: CACAGCCCTTCCTCCGCCGCACACTCCCCCTGGGTC...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGGGTGGGCAGCCACCTaGGCCTGTGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRGWAAT*ACGWAA
Trigger: GGCTGCCCAACCACAGGCTCAGGTGGCTGCCCACCC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCTCCGCACTGGCACCTaGGCCCTGGTCCAGACGTGG +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVELRTGT*ALVQTW
Trigger: CCACGTCTGGACCAGGGCTCAGGTGCCAGTGCGGAG...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGGGCTGGTGGTCTGAGTaGCCCCAGGCTCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEGWWSE*PQAPRG
Trigger: CCCTCTCGGAGCCTGGGGTCACTCAGACCACCAGCC...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGTCCCCGGTTCAGAGCTaGGCTGAATGCCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVESPVQS*AECPGP
Trigger: GGGGCCGGGGCATTCAGCTCAGCTCTGAACCGGGGA...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGTCACGGCCCGTCACCTaGGGCAGTCCTTGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVESRPVT*GSPCRA
Trigger: GGCACGGCAAGGACTGCCTCAGGTGACGGGCCGTGA...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGGCTTGGGAAGGCTCCTaGCCCGTCCCCTCTCACGGC +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQAWEGS*PVPSHG
Trigger: GCCGTGAGAGGGGACGGGTCAGGAGCCTTCCCAAGC...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCAAGACCAGGCCTTCCCTaGGAGCCGCTGCTAGCCGAC +
Preference number: 4 (lower is better)
Translates to: PAGLSAATARLTPDLSLPRPGLP*EPLLAD
Trigger: GTCGGCTAGCAGCGGCTCTCAGGGAAGGCCTGGTCT...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCATCTCGCCGAGCTATGTaGGTTGGCCACCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPASRRAM*VGHQVP
Trigger: CGGAACCTGGTGGCCAACGCACATAGCTCGGCGAGA...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTAGCTCACAGAGGCTGTaGCGCGCCCGCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTSSQRL*RARPTG
Trigger: GCCAGTGGGGCGGGCGCGGCACAGCCTCTGTGAGCT...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAACACCCTCGCGGCTCTaGACCAGCCGCTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRTPSRL*TSRSAG
Trigger: GCCCGCAGAGCGGCTGGTGCAGAGCCGCGAGGGTGT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCACCAGCCTCCACGACCTaGGCTAGCCTGAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: PAGLSAATARLTPDLSLPPASTT*ASLRAR
Trigger: CCGTGCTCTCAGGCTAGCCCAGGTCGTGGAGGCTGG...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAACGGCTCCTCCCCGCTaGACTGAGCGCAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRTAPPR*TERSHG
Trigger: GCCGTGGCTGCGCTCAGTCCAGCGGGGAGGAGCCGT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGGGTTCCGGGCAGAGCTaGAGCCAGGCAGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQGSGQS*SQAGTQ
Trigger: TTGGGTCCCTGCCTGGCTTCAGCTCTGCCCGGAACC...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCACTCTACAGAGCCAGCTaGGGCCACGATGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPALYRAS*GHDAIE
Trigger: CTCTATGGCATCGTGGCCTCAGCTGGCTCTGTAGAG...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGTCCTCCCCGCTGGACTaGGCGCAGCCACGGCACGTC +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTSSPLD*AQPRHV
Trigger: GACGTGCCGTGGCTGCGCTCAGTCCAGCGGGGAGGA...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGATCCCCGGTTCAGAGCTaGGCTGAATGCCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRSPVQS*AECPGP
Trigger: GGGGCCGGGGCATTCAGCTCAGCTCTGAACCGGGGA...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCACACCGCGTGTTCAAATaGCCGCTGGCGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAGLSAATARLTPDLSLPHRVFK*PLAEAG
Trigger: CCCAGCTTCCGCCAGCGGGCATTTGAACACGCGGTG...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTAGCTCACAGAGGCTGTaGCGCGCCCGCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPSSQRL*RARPTG
Trigger: GCCAGTGGGGCGGGCGCGGCACAGCCTCTGTGAGCT...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTCCCTGCCAAGCCTGGTaGACACCCTCGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTPCQAW*TPSRLC
Trigger: GCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGG...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGCTGGGGGCCCGTGCTaGAGGACTGGAAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWAGGPC*RTGRAL
Trigger: CAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGACCCAGGGGGAGTGTaGGGCGGAGGAAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWDPGGV*GGGRAV
Trigger: CACAGCCCTTCCTCCGCCGCACACTCCCCCTGGGTC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTCAGCCCCGCTTCCTCTaGAGCCCGGCGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPQPRFL*SPALGW
Trigger: CCACCCAAGCGCCGGGCTGCAGAGGAAGCGGGGCTG...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGGCATCTAAGCTGTGCTaGCTGCGCCCTGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQASKLC*LRPAPH
Trigger: GTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGC...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCCCGCTCACCTGGACTaGGCGGGGTCCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDPAHLD*AGSPGG
Trigger: TCCTCCAGGGGACCCCGCGCAGTCCAGGTGAGCGGG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000633942.1
CDS-3UTR CCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTTGGGGCCGTCTGCTCTaGGTGGGCAGCCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTWGRLL*VGSHLS
Trigger: GCTCAGGTGGCTGCCCACCCAGAGCAGACGGCCCCA...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCCACGTCCACCACGCTaGCCACCCCGGAGGACACGG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDPRPPR*PPRRTR
Trigger: CCGTGTCCTCCGGGGTGGCCAGCGTGGTGGACGTGG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGGCACATCCGGGGGCGTaGAGATGCCAGAGAACGGGG +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQAHPGA*RCQRTG
Trigger: CCCCGTTCTCTGGCATCTCCACGCCCCCGGATGTGC...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCGTGTCCTCCCTGCCTaGGGCGGCCCCTTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWRVLPA*GGPLGE
Trigger: TTCACCCAAGGGGCCGCCCCAGGCAGGGAGGACACG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGCTCCTCCGCATTCATaGGGTGGAAGATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAAPPHS*GGRCPP
Trigger: TGGGGGACATCTTCCACCCCATGAATGCGGAGGAGC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCAGCGTCCTCCGCACTaGCACCTGAGCCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEQRPPH*HLSPGP
Trigger: TGGACCAGGGCTCAGGTGCCAGTGCGGAGGACGCTG...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGTCCGCGAGGCTAGGCTaGGAGGGTGGAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWSARLG*EGGDQA
Trigger: GGCCTGGTCTCCACCCTCCCAGCCTAGCCTCGCGGA...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CAA 72 bp CCGTCCCCTCTCACGGCCCGTCACCTGAGGCAGTCCTaGCCGTGCCAGCTTCCCCGGTTCAGAGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PSPLTARHLRQS*PCQLPRFRAEL
Trigger: CAGCTCAGCTCTGAACCGGGGAAGCTGGCACGGCAAGGACTGCCTCAGGTGACGGGCCGTGAGAGGGGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGTGTCGCCACGTTCCCTaGCCCCATGAGCCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWCRHVP*PHEPSG
Trigger: TCCGCTGGGCTCATGGGGTCAGGGAACGTGGCGACA...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGGCTCCGGGCCTACACTaGGCACATCCGGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLAPGLH*AHPGAW
Trigger: CCACGCCCCCGGATGTGCTCAGTGTAGGCCCGGAGC...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCCTCCGCACTGGCACCTaGGCCCTGGTCCAGACGTGG +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCALRTGT*ALVQTW
Trigger: CCACGTCTGGACCAGGGCTCAGGTGCCAGTGCGGAG...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATGGCTGGTGGTCTGAGTaGCCCCAGGCTCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDGWWSE*PQAPRG
Trigger: CCCTCTCGGAGCCTGGGGTCACTCAGACCACCAGCC...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGGCGCTTGGGTGGGCCTaGGGACCCAGGGGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLALGWA*GPRGSV
Trigger: CACACTCCCCCTGGGTCCTCAGGCCCACCCAAGCGC...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCGGGAAGGGACTTCCTaGGCTGCGGCCCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWREGTS*AAAPCL
Trigger: CAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGGCCCAGCCCAACCCTaGAAGGCCAGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWGPAQP*KASGRR
Trigger: TCTCCTGCCACTGGCCTTTCAGGGTTGGGCTGGGCC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGTCCATGGGGCCGTCTaGTCTGGGTGGGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPVHGAV*SGWAAT
Trigger: GGTGGCTGCCCACCCAGAGCAGACGGCCCCATGGAC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGCTTGGAACTGGCCGTaGTGCAGGTGGCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWAWNWP*CRWLTA
Trigger: CGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGGGCTCCTACAGCTACTaGCCGCCAGCGGGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQGSYSY*PPAGKA
Trigger: CGCCTTGCCCGCTGGCGGGCAGTAGCTGTAGGAGCC...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGAGAACGGGGCCTCTTaGGGGCTCAGGGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRENGAS*GLRAVC
Trigger: GCAGACTGCCCTGAGCCCCCAAGAGGCCCCGTTCTC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCCTGGGGCGGCCCCTTaGGTGAACGTCGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDPGAAP*VNVATS
Trigger: TGACGTGGCGACGTTCACCCAAGGGGCCGCCCCAGG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCCGCCGACAGCACCTTTaGCCCAGGCTGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCARRQHL*PRLGGS
Trigger: GCTGCCTCCCAGCCTGGGCCAAAGGTGCTGTCGGCG...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCGCCGACAGCACCTTTaGCCCAGGCTGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDRRQHL*PRLGGS
Trigger: GCTGCCTCCCAGCCTGGGCCAAAGGTGCTGTCGGCG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTCTGGCACCTGAGCCCTaGTCCAGACGTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTLAPEP*SRRGCP
Trigger: AGGGCAGCCACGTCTGGACCAGGGCTCAGGTGCCAG...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACAGCGTCCTCCGCACTaGCACCTGAGCCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRQRPPH*HLSPGP
Trigger: TGGACCAGGGCTCAGGTGCCAGTGCGGAGGACGCTG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGCATCCCGCTCCTCCTaGACAGCAGCGTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWASRSS*TAASSA
Trigger: TGCGGAGGACGCTGCTGTCCAGGAGGAGCGGGATGC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTAACCCCTGCCAAGCCTaGTGCACACCCTCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTNPCQA*CTPSRL
Trigger: GAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTT...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGAACCGATCCAGGTTTaGGGGCGGGGAGAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAEPIQV*GRGESS
Trigger: AGAACTTTCTCCCCGCCCCCAAACCTGGATCGGTTC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGGGGATATGGCTTCCTaGGGAGGCCGGGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRGDMAS*GGRAER
Trigger: CCGTTCAGCCCGGCCTCCCCAGGAAGCCATATCCCC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGAGGCGGCAGTGTCACTaGGCCCGTTTGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQRRQCH*ARLGLG
Trigger: ACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCT...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGGTGGGCAGCCACCTaGGCCTGTGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLGWAAT*ACGWAA
Trigger: GGCTGCCCAACCACAGGCTCAGGTGGCTGCCCACCC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATTGTCCATGGCCCCTGTaGCCCCGCTGGACACCACCT +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDCPWPL*PRWTPP
Trigger: AGGTGGTGTCCAGCGGGGTCACAGGGGCCATGGACA...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCGTTCCCTGACCCCATaGGCCCAGCGGACACTGCGT +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDRSLTP*AQRTLR
Trigger: ACGCAGTGTCCGCTGGGCTCATGGGGTCAGGGAACG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCCGTTCCCTGACCCCATaGGCCCAGCGGACACTGCGT +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCARSLTP*AQRTLR
Trigger: ACGCAGTGTCCGCTGGGCTCATGGGGTCAGGGAACG...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGGCGGCCCCTTGGGTaGACGTCGCCACGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLGRPLG*TSPRQS
Trigger: CGACTGACGTGGCGACGTTCACCCAAGGGGCCGCCC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGTGGGAGGCAGCCAGCTaGGCTTGCTCCTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWWEAAS*ACSSAF
Trigger: GAATGCGGAGGAGCAAGCTCAGCTGGCTGCCTCCCA...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGCCCTACCAGCCAGCTaGGCGGGGGATTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTALPAS*AGDCAV
Trigger: TACAGCACAATCCCCCGCTCAGCTGGCTGGTAGGGC...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGCGGGGAGAAAGTTCTaGGGCAGCTCCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRAGRKF*GSSSLD
Trigger: GTCCAGGGAGGAGCTGCCTCAGAACTTTCTCCCCGC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGCGCTTGGGTGGGCCTaGGGACCCAGGGGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHALGWA*GPRGSV
Trigger: CACACTCCCCCTGGGTCCTCAGGCCCACCCAAGCGC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGTCTCACACCCGACCTaGGCCTGCCAGCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPVSHPT*ACQPPR
Trigger: TCGTGGAGGCTGGCAGGCTCAGGTCGGGTGTGAGAC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCGGTTCAGAGCTGAGCTaGATGCCCCGGCCCCTCACG +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAGSELS*MPRPLT
Trigger: CGTGAGGGGCCGGGGCATTCAGCTCAGCTCTGAACC...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCGGGAAGGGACTTCCTaGGCTGCGGCCCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDREGTS*AAAPCL
Trigger: CAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCACACCCACACACCGTGTaGCTTTGGACAGGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PAGLSAATARLTPDLSLPHPHTV*LWTGSP
Trigger: AGGGGAACCTGTCCAAAGTCACACGGTGTGTGGGTG...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAAGACCAGGCCTTCCCTaGGAGCCGCTGCTAGCCGAC +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRRPGLP*EPLLAD
Trigger: GTCGGCTAGCAGCGGCTCTCAGGGAAGGCCTGGTCT...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGCAGGGTCCAGGCAGGTaGGCAGGTCCGATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTQGPGR*AGPMWG
Trigger: TCCCCACATCGGACCTGCTCACCTGCCTGGACCCTG...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATGGCCCAGCCCAACCCTaGAAGGCCAGTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDGPAQP*KASGRR
Trigger: TCTCCTGCCACTGGCCTTTCAGGGTTGGGCTGGGCC...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACACCGCGTGTTCAAATaGCCGCTGGCGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRHRVFK*PLAEAG
Trigger: CCCAGCTTCCGCCAGCGGGCATTTGAACACGCGGTG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCTTGGAACTGGCCGTaGTGCAGGTGGCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRAWNWP*CRWLTA
Trigger: CGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGC...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCTGCACCAGCCGCTCTaGGGGCAGCTCCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWLHQPL*GQLLYR
Trigger: TCTGTAGAGGAGCTGCCCGCAGAGCGGCTGGTGCAG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGTGCCACAGCACTGCCTaGACCGCTGATAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWCHSTA*TADSWG
Trigger: CCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCA...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACCAGCCCCGCTTCCTCTaGAGCCCGGCGCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHQPRFL*SPALGW
Trigger: CCACCCAAGCGCCGGGCTGCAGAGGAAGCGGGGCTG...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGAGGCAGTCCTTGCCGTaGCAGCTTCCCCGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVERQSLP*QLPRFR
Trigger: TCTGAACCGGGGAAGCTGGCACGGCAAGGACTGCCT...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTCTCCTTCTCCGTCCATaGGGCCGTCTGCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTLLLRP*GRLLWV
Trigger: CACCCAGAGCAGACGGCCCCATGGACGGAGAAGGAG...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCATGGCCCTGGACATCTTaGAACACACCAGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAWPWTS*NTPGLW
Trigger: CCAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCA...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGTGTCCAGGCCTCCCTaGACCACTCCCTTAGCCACG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRVSRPP*TTPLAT
Trigger: CGTGGCTAAGGGAGTGGTCCAGGGAGGCCTGGACAC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCGAGAACGGGGCCTCTTaGGGGCTCAGGGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAENGAS*GLRAVC
Trigger: GCAGACTGCCCTGAGCCCCCAAGAGGCCCCGTTCTC...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACAGCATTGCCAAGCGTaGGGCTTCTTCGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRQHCQA*GFFGAV
Trigger: CACGGCCCCGAAGAAGCCCCACGCTTGGCAATGCTG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGTGTTCAAATGCCCGCTaGCGGAAGCTGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQCSNAR*RKLGPR
Trigger: CCTGGGTCCCAGCTTCCGCCAGCGGGCATTTGAACA...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGGGCCAGAGTGTCCCTaGCTTGGAACTGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRGPECP*LGTGRA
Trigger: AGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGCCCTGGTCCAGACGTaGCTGCCCTTCTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPALVQT*LPFWSL
Trigger: CAGGCTCCAGAAGGGCAGCCACGTCTGGACCAGGGC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGCCCGGAGCAGGGCGTaGGGTGGCTCAGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRARSRA*GGSVKK
Trigger: CTTCTTAACTGAGCCACCCCACGCCCTGCTCCGGGC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGATGCACCGCTGATAGCTaGGGGCCCGTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRCTADS*GPVLQD
Trigger: GTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCA...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTACGGCTCCTCCCCGCTaGACTGAGCGCAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLTAPPR*TERSHG
Trigger: GCCGTGGCTGCGCTCAGTCCAGCGGGGAGGAGCCGT...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGTGTCGCCACGTTCCCTaGCCCCATGAGCCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLCRHVP*PHEPSG
Trigger: TCCGCTGGGCTCATGGGGTCAGGGAACGTGGCGACA...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCAGTTCTGGAAGGTGCTaGGGCCAGTGTGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCASSGRC*GQCGWP
Trigger: GGGCCACCCACACTGGCCTCAGCACCTTCCAGAACT...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTGGTCCTGGAACTGGTaGGTCCACCCCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAWSWNW*VHPRRW
Trigger: CCACCTCCTGGGGTGGACTCACCAGTTCCAGGACCA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATTGGTCCTGGAACTGGTaGGTCCACCCCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDWSWNW*VHPRRW
Trigger: CCACCTCCTGGGGTGGACTCACCAGTTCCAGGACCA...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCCATGGGTGTCGGGCTaGGGAGAAGGCTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDPWVSG*GEGLGR
Trigger: CCTTCCCAAGCCTTCTCCTCAGCCCGACACCCATGG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGCTTGGTGCCCGTAAGTaGAGACCGAGTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQLGARK*RPSGVQ
Trigger: CTGGACACCACTCGGTCTGCACTTACGGGCACCAAG...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCTTGGTGCCCGTAAGTaGAGACCGAGTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVELGARK*RPSGVQ
Trigger: CTGGACACCACTCGGTCTGCACTTACGGGCACCAAG...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGAGCCCAGCGGACACTaGGTCTTTGGTTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTEPSGH*VFGSGQ
Trigger: CTGACCGGAACCAAAGACGCAGTGTCCGCTGGGCTC...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTGGTCCAGACGTGGCTaGCCTTCTGGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAWSRRG*PSGACW
Trigger: CCAGCAGGCTCCAGAAGGGCAGCCACGTCTGGACCA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGTGGTCCAGACGTGGCTaGCCTTCTGGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQWSRRG*PSGACW
Trigger: CCAGCAGGCTCCAGAAGGGCAGCCACGTCTGGACCA...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTACACCCTCGCGGCTCTaGACCAGCCGCTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSTPSRL*TSRSAG
Trigger: GCCCGCAGAGCGGCTGGTGCAGAGCCGCGAGGGTGT...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTCCCTGCCAAGCCTGGTaGACACCCTCGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLPCQAW*TPSRLC
Trigger: GCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGG...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTAGCTGCTCTAACCCCTaGCAAGCCTGGTGCACACCC +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTSCSNP*QAWCTP
Trigger: GGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCT...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCAGGCCCTCCAGCAGCTaGTCTAACCCCTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCARPSSS*SNPCQA
Trigger: GGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCT...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCTGAGCGGGGGATTGTaGTGTAGGCCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDLSGGL*CRPSSS
Trigger: GCTGCTGGAGGGCCTACAGCACAATCCCCCGCTCAG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTAGCGGGGCAAACAGATaGCCTTCCAGGCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPSGANR*PSRLGT
Trigger: CGTGCCCAGCCTGGAAGGGCATCTGTTTGCCCCGCT...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGAGCGGGGCAAACAGATaGCCTTCCAGGCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTSGANR*PSRLGT
Trigger: CGTGCCCAGCCTGGAAGGGCATCTGTTTGCCCCGCT...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGCTGGGGGCCCGTGCTaGAGGACTGGAAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLAGGPC*RTGRAL
Trigger: CAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGTGCCACAGCACTGCCTaGACCGCTGATAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTCHSTA*TADSWG
Trigger: CCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCA...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATGCGGAGGAAGGGCTGTaGCATAGGCACGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDAEEGL*HRHAAS
Trigger: AGAGGCTGCGTGCCTATGGCACAGCCCTTCCTCCGC...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGAGCCACCTGAGCCTGTaGTTGGGCAGCCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLSHLSL*LGSLGS
Trigger: GCTGCCGAGGCTGCCCAACCACAGGCTCAGGTGGCT...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGCTCCTTCTCCGTCCATaGGGCCGTCTGCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTLLLRP*GRLLWV
Trigger: CACCCAGAGCAGACGGCCCCATGGACGGAGAAGGAG...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTCCTGGATGGCCTCTTTaGCCAAGTTCACGGCACCGG +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTPGWPL*PSSRHR
Trigger: CCGGTGCCGTGAACTTGGCCAAAGAGGCCATCCAGG...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAGCACATCCGGGGGCGTaGAGATGCCAGAGAACGGGG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPAHPGA*RCQRTG
Trigger: CCCCGTTCTCTGGCATCTCCACGCCCCCGGATGTGC...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACCGTGTCCTCCCTGCCTaGGGCGGCCCCTTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHRVLPA*GGPLGE
Trigger: TTCACCCAAGGGGCCGCCCCAGGCAGGGAGGACACG...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCCCGCTGGCGGAAGCTaGGACCCAGGTCACCTAAAC +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQPAGGS*DPGHLN
Trigger: GTTTAGGTGACCTGGGTCCCAGCTTCCGCCAGCGGG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCCCGCTGGCGGAAGCTaGGACCCAGGTCACCTAAAC +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDPAGGS*DPGHLN
Trigger: GTTTAGGTGACCTGGGTCCCAGCTTCCGCCAGCGGG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGTGGCCGTGCTGCAGGTaGCTCACCGCGTGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQWPCCR*LTACSN
Trigger: ATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCA...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAAGAGTGTCCCTGGCTTaGAACTGGCCGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRRVSLA*NWPCCR
Trigger: CCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGGGCCAGAGTGTCCCTaGCTTGGAACTGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPGPECP*LGTGRA
Trigger: AGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAAAGCAGTCCTGGAGCTaGGCCAGAGTGTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRKQSWS*ARVSLA
Trigger: AGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAACGTGGCTGCCCTTCTaGAGCCTGCTGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRTWLPF*SLLGLF
Trigger: GAAAAGGCCCAGCAGGCTCCAGAAGGGCAGCCACGT...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCTGGCACCTGAGCCCTaGTCCAGACGTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLLAPEP*SRRGCP
Trigger: AGGGCAGCCACGTCTGGACCAGGGCTCAGGTGCCAG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGAGGCAGCTCCTCCCTaGACAGAGCAGGGCGACCCC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLEAAPP*TEQGDP
Trigger: GGGGTCGCCCTGCTCTGTCCAGGGAGGAGCTGCCTC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATGCCCGGAGCAGGGCGTaGGGTGGCTCAGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDARSRA*GGSVKK
Trigger: CTTCTTAACTGAGCCACCCCACGCCCTGCTCCGGGC...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGTGCACCGCTGATAGCTaGGGGCCCGTGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLCTADS*GPVLQD
Trigger: GTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCA...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATGGCTGCTGTGGCTCCTaGCAGCTTTGTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDGCCGS*QLCPHR
Trigger: ACGGTGGGGACAAAGCTGCCAGGAGCCACAGCAGCC...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAGGGGATATGGCTTCCTaGGGAGGCCGGGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPGDMAS*GGRAER
Trigger: CCGTTCAGCCCGGCCTCCCCAGGAAGCCATATCCCC...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCATGTCCTAGGAGAGCATaGAAAGGGGACGACAAGGTT +
Preference number: 4 (lower is better)
Translates to: EHGARRPGPPPPVSLMPACPRRA*KGDDKV
Trigger: AACCTTGTCGTCCCCTTTCCATGCTCTCCTAGGACA...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGACTGCGGCCCCATGCTTaGTTGGCTGGACGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRLRPHA*LAGREL
Trigger: CAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAG...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCAGTGGCAGGAGAGCTaGGCGGGAGCAAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQQWQES*AGASSS
Trigger: GGAAGAGCTTGCTCCCGCCCAGCTCTCCTGCCACTG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGACCCTGAAAGGCCAGTaGCAGGAGAGCTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTTLKGQ*QESWAG
Trigger: TCCCGCCCAGCTCTCCTGCCACTGGCCTTTCAGGGT...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGGGCCCGTTTGGGACTaGGTTGAGCCATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRGPVWD*VEPSGH
Trigger: GTGGCCTGATGGCTCAACCCAGTCCCAAACGGGCCC...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGGGGCCCGTTTGGGACTaGGTTGAGCCATCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTGPVWD*VEPSGH
Trigger: GTGGCCTGATGGCTCAACCCAGTCCCAAACGGGCCC...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGAGGCGGCAGTGTCACTaGGCCCGTTTGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQRRQCH*ARLGLG
Trigger: ACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCT...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGCATTGCTGGTGCAGTaGGGGCCTGAGCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLALLVQ*GPELGR
Trigger: GCGCCCCAGCTCAGGCCCCCACTGCACCAGCAATGC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCGCATTGCTGGTGCAGTaGGGGCCTGAGCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSALLVQ*GPELGR
Trigger: GCGCCCCAGCTCAGGCCCCCACTGCACCAGCAATGC...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGAGAAGCTGCAGGCCTaGCCTCACCCTGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGREKLQA*PHPGVT
Trigger: GGTGACACCAGGGTGAGGCCAGGCCTGCAGCTTCTC...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000633942.1
CDS-3UTR TCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCGGTTCCGGGCAGAGCTaGAGCCAGGCAGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSGSGQS*SQAGTQ
Trigger: TTGGGTCCCTGCCTGGCTTCAGCTCTGCCCGGAACC...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGTCTCACACCCGACCTaGGCCTGCCAGCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLVSHPT*ACQPPR
Trigger: TCGTGGAGGCTGGCAGGCTCAGGTCGGGTGTGAGAC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGGTTCAGAGCTGAGCTaGATGCCCCGGCCCCTCACG +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHGSELS*MPRPLT
Trigger: CGTGAGGGGCCGGGGCATTCAGCTCAGCTCTGAACC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGCCATCAGGCCACCGTaGGAAGCGACTAAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTAIRPP*EATKRH
Trigger: GTGCCTTTTAGTCGCTTCTCACGGTGGCCTGATGGC...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGTCCATGGGGCCGTCTaGTCTGGGTGGGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSVHGAV*SGWAAT
Trigger: GGTGGCTGCCCACCCAGAGCAGACGGCCCCATGGAC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGGAGCCCAGCGGACACTaGGTCTTTGGTTCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQEPSGH*VFGSGQ
Trigger: CTGACCGGAACCAAAGACGCAGTGTCCGCTGGGCTC...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATGGGCTCAGGGCAGTCTaGTCCCCACCATTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDGLRAV*SPPLSV
Trigger: CACAGACAATGGTGGGGAGCAGACTGCCCTGAGCCC...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCATGGAACTGGCCGTGCTaGAGGTGGCTCACCGCGTGT +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPWNWPC*RWLTAC
Trigger: ACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCA...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAAGCTGCTCTAACCCCTaGCAAGCCTGGTGCACACCC +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRSCSNP*QAWCTP
Trigger: GGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCT...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAAGGCCCTCCAGCAGCTaGTCTAACCCCTGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPRPSSS*SNPCQA
Trigger: GGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCT...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGATAGCTGGGGGCCCGTaGTGCAGGACTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLIAGGP*CRTGRA
Trigger: GGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTAT...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATAGGCAGTCCTTGCCGTaGCAGCTTCCCCGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDRQSLP*QLPRFR
Trigger: TCTGAACCGGGGAAGCTGGCACGGCAAGGACTGCCT...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGAGGGACTTCCTGAGCTaGGGCCCCATGCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQRDFLS*GPMLGW
Trigger: CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCT...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGCATCTAAGCTGTGCTaGCTGCGCCCTGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHASKLC*LRPAPH
Trigger: GTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGTGCTGAGGCCAGTGTaGGTGGCCCCTGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSVLRPV*VAPVAT
Trigger: CGTGGCGACAGGGGCCACCCACACTGGCCTCAGCAC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTCCTGGGGCGGCCCCTTaGGTGAACGTCGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSPGAAP*VNVATS
Trigger: TGACGTGGCGACGTTCACCCAAGGGGCCGCCCCAGG...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCAGCATTGCCAAGCGTaGGGCTTCTTCGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLQHCQA*GFFGAV
Trigger: CACGGCCCCGAAGAAGCCCCACGCTTGGCAATGCTG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTCCGCATTCATGGGGTaGAAGATGTCCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCASAFMG*KMSPSP
Trigger: GGGGCTGGGGGACATCTTCCACCCCATGAATGCGGA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATTCCGCATTCATGGGGTaGAAGATGTCCCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDSAFMG*KMSPSP
Trigger: GGGGCTGGGGGACATCTTCCACCCCATGAATGCGGA...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATAGAGTGTCCCTGGCTTaGAACTGGCCGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDRVSLA*NWPCCR
Trigger: CCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCT...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAAAGCAGTCCTGGAGCTaGGCCAGAGTGTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRKQSWS*ARVSLA
Trigger: AGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTT...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATACGTGGCTGCCCTTCTaGAGCCTGCTGGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDTWLPF*SLLGLF
Trigger: GAAAAGGCCCAGCAGGCTCCAGAAGGGCAGCCACGT...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCGCCCTGGTCCAGACGTaGCTGCCCTTCTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSALVQT*LPFWSL
Trigger: CAGGCTCCAGAAGGGCAGCCACGTCTGGACCAGGGC...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTAACCCCTGCCAAGCCTaGTGCACACCCTCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLNPCQA*CTPSRL
Trigger: GAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTT...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAGGCTGCTGTGGCTCCTaGCAGCTTTGTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPGCCGS*QLCPHR
Trigger: ACGGTGGGGACAAAGCTGCCAGGAGCCACAGCAGCC...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACTCTTACCGGGTGAGTaGGGATATGGCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRLLPGE*GYGFLG
Trigger: CCCCAGGAAGCCATATCCCCACTCACCCGGTAAGAG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGTGGGTCTGGGGTTCCTaGGCTCGTGTCCTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTWVWGS*ARVLGE
Trigger: CTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCA...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGGCAAATGGCTGTGTCTaGCATCCTAGCCTCCGATGG +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEANGCV*HPSLRW
Trigger: CCATCGGAGGCTAGGATGCCAGACACAGCCATTTGC...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCACTGCGGCCCCATGCTTaGTTGGCTGGACGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPLRPHA*LAGREL
Trigger: CAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAG...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCAGCGTTCAGGGAGCATaGGCCTCAGGGGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSSVQGA*ASGASL
Trigger: GAGGCTGGCCCCTGAGGCCCATGCTCCCTGAACGCT...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGGATGCTTCCTGCATCTaGCAGCCCAGGGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQDASCI*QPRVQA
Trigger: TGCCTGGACCCTGGGCTGCCAGATGCAGGAAGCATC...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGATGCTTCCTGCATCTaGCAGCCCAGGGTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPDASCI*QPRVQA
Trigger: TGCCTGGACCCTGGGCTGCCAGATGCAGGAAGCATC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCGGGCGGCCCCTTGGGTaGACGTCGCCACGTCAGTCG +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGGRPLG*TSPRQS
Trigger: CGACTGACGTGGCGACGTTCACCCAAGGGGCCGCCC...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACTGGGAGGCAGCCAGCTaGGCTTGCTCCTCCGCATTC +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHWEAAS*ACSSAF
Trigger: GAATGCGGAGGAGCAAGCTCAGCTGGCTGCCTCCCA...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGCCCTACCAGCCAGCTaGGCGGGGGATTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLALPAS*AGDCAV
Trigger: TACAGCACAATCCCCCGCTCAGCTGGCTGGTAGGGC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCGCGGGGAGAAAGTTCTaGGGCAGCTCCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSAGRKF*GSSSLD
Trigger: GTCCAGGGAGGAGCTGCCTCAGAACTTTCTCCCCGC...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCTCCTCCCCGCTGGACTaGGCGCAGCCACGGCACGTC +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGSSPLD*AQPRHV
Trigger: GACGTGCCGTGGCTGCGCTCAGTCCAGCGGGGAGGA...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTTTGGTTGGCTGGACGTaGGCTGCAGTCACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPLVGWT*AAVTVP
Trigger: AGGCACAGTGACTGCAGCTCACGTCCAGCCAACCAA...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGATTGGTTGGCTGGACGTaGGCTGCAGTCACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRLVGWT*AAVTVP
Trigger: AGGCACAGTGACTGCAGCTCACGTCCAGCCAACCAA...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGGCCATCAGGCCACCGTaGGAAGCGACTAAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTAIRPP*EATKRH
Trigger: GTGCCTTTTAGTCGCTTCTCACGGTGGCCTGATGGC...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAGGGCTCAGGGCAGTCTaGTCCCCACCATTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPGLRAV*SPPLSV
Trigger: CACAGACAATGGTGGGGAGCAGACTGCCCTGAGCCC...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCTGGAACTGGCCGTGCTaGAGGTGGCTCACCGCGTGT +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSWNWPC*RWLTAC
Trigger: ACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCA...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCCTGCACCAGCCGCTCTaGGGGCAGCTCCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSLHQPL*GQLLYR
Trigger: TCTGTAGAGGAGCTGCCCGCAGAGCGGCTGGTGCAG...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCCACCCCCTGCAAACTaGTCAGTCTCAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQPPPAN*SVSSQA
Trigger: AGCCTGGCTTGAGACTGAGCAGTTTGCAGGGGGTGG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGAAGCAAGTCACCCCGTaGTCCGAAGTTGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQKQVTP*SEVAHS
Trigger: GGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTT...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGGGTTTGATGCTTCCTaGATCTGGCAGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRGFDAS*IWQPRV
Trigger: GACCCTGGGCTGCCAGATGCAGGAAGCATCAAACCC...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAGAGAACGTGAGAAGCTaGAGGCCTGGCCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPENVRS*RPGLTL
Trigger: CAGGGTGAGGCCAGGCCTGCAGCTTCTCACGTTCTC...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633942.1
CDS-3UTR CCA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTAGGACACGGCATCCTTaGCCCTGGACATCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: DATALPAPLIAGGPCCRTRTRHP*PWTSWN
Trigger: GTTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCT...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGTGTTCAAATGCCCGCTaGCGGAAGCTGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLCSNAR*RKLGPR
Trigger: CCTGGGTCCCAGCTTCCGCCAGCGGGCATTTGAACA...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGCACGCAGCCTCTGTaGCTGTTCCCAGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLGTQPL*LFPALS
Trigger: AGACAGGGCTGGGAACAGCCACAGAGGCTGCGTGCC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCTCTTACCGGGTGAGTaGGGATATGGCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDLLPGE*GYGFLG
Trigger: CCCCAGGAAGCCATATCCCCACTCACCCGGTAAGAG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAGGCCCCATGCTTGGTTaGCTGGACGTGAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPGPMLG*LDVSCS
Trigger: ACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCC...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAGCTGCTAGCCGACAGTaGTCTCCAGCGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPAASRQ*SPAFRE
Trigger: CTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGC...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCCAGTGGCAGGAGAGCTaGGCGGGAGCAAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSQWQES*AGASSS
Trigger: GGAAGAGCTTGCTCCCGCCCAGCTCTCCTGCCACTG...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGTCACTGGGCCCGTTTaGGACTGGGTTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPVTGPV*DWVEPS
Trigger: TGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGAC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTAGTTCTGGAAGGTGCTaGGGCCAGTGTGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSSSGRC*GQCGWP
Trigger: GGGCCACCCACACTGGCCTCAGCACCTTCCAGAACT...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCGACCCACTTTCAGCATaGGAACGGAGCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSDPLSA*ERSCPE
Trigger: CTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTC...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCTCACGGCCCGTCACCTaGGGCAGTCCTTGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGSRPVT*GSPCRA
Trigger: GGCACGGCAAGGACTGCCTCAGGTGACGGGCCGTGA...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGTGCAGTCACTGTGCCTaGTTTCTGCAAATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVECSHCA*FLQMAV
Trigger: CACAGCCATTTGCAGAAATCAGGCACAGTGACTGCA...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCTCATTCTGCAGCATTaGCAAGCGTGGGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWLILQH*QAWGFF
Trigger: GAAGAAGCCCCACGCTTGGCAATGCTGCAGAATGAG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTCCCTCCAACTCATTCTaGAGCATTGCCAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPPSNSF*SIAKRG
Trigger: CCCACGCTTGGCAATGCTGCAGAATGAGTTGGAGGG...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCCACCCCCTGCAAACTaGTCAGTCTCAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLPPPAN*SVSSQA
Trigger: AGCCTGGCTTGAGACTGAGCAGTTTGCAGGGGGTGG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACAGGGACTTCCTGAGCTaGGGCCCCATGCTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHRDFLS*GPMLGW
Trigger: CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCT...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGTTCTCTTTCCTCCTCTaGATAAGGGGCTGTCACGTG +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEFSFLL*IRGCHV
Trigger: CACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAA...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCGGGACCCAAAGAAGCTaGCCAGGGTCTTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSGTQRS*PGSCPS
Trigger: CGAAGGGCAAGACCCTGGGCAGCTTCTTTGGGTCCC...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTCCGAGCTATGTGCGTTaGCCACCAGGTTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSPSYVR*PPGSGQ
Trigger: CTGCCCGGAACCTGGTGGCCAACGCACATAGCTCGG...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTAACACACCAGGTCTTTaGCCCCGGACACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LRAAASRQWSPAFREHGPNTPGL*PRTPSA
Trigger: AGCAGATGGTGTCCGGGGCCAAAGACCTGGTGTGTT...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGAGGACACGGCATCCTTaGCCCTGGACATCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQRTRHP*PWTSWN
Trigger: GTTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCT...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGTGTCCAGACCCCCTTaGACGGCCCCCTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSVSRPP*TAPLAM
Trigger: CATGGCTAAGGGGGCCGTCCAAGGGGGTCTGGACAC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCGTGCTGAGGCCAGTGTaGGTGGCCCCTGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGVLRPV*VAPVAT
Trigger: CGTGGCGACAGGGGCCACCCACACTGGCCTCAGCAC...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACTAGGTAACCAGTTCTaGAAGGTGCTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRLGNQF*KVLRPV
Trigger: CACTGGCCTCAGCACCTTCCAGAACTGGTTACCTAG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCCCTTCTGGAGCCTGCTaGGCCTTTTCAATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCAPSGAC*AFSISL
Trigger: CAGGCTGATTGAAAAGGCCCAGCAGGCTCCAGAAGG...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCGCACACGGTGACCCCTaGGGCCCCTCCACCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGAHGDP*GPSTLP
Trigger: AGGAAGGGTGGAGGGGCCCCAGGGGTCACCGTGTGC...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGTTGCTCATTCCACAGTaGCGTCTCGTGTTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVELLIPQ*RLVFVV
Trigger: GACGACAAACACGAGACGCCACTGTGGAATGAGCAA...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGGGTTCTCTTACCGGGTaGGTGGGGATATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLGSLTG*VGIWLP
Trigger: AGGAAGCCATATCCCCACTCACCCGGTAAGAGAACC...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGACATAGTGAGAACGTaGGAAGCTGCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLDIVRT*EAAGLA
Trigger: GGCCAGGCCTGCAGCTTCTCACGTTCTCACTATGTC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGGACTCCAGTAGTCACTaGATCCTTAGCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQDSSSH*ILSATQ
Trigger: CTGAGTGGCGCTAAGGATGCAGTGACTACTGGAGTC...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGACTGTGCCTGATTTCTaGAAATGGCTGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQTVPDF*KWLCLA
Trigger: TGCCAGACACAGCCATTTGCAGAAATCAGGCACAGT...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCAGGGCATCTAAGCTGTaGTGCCTGCGCCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGRASKL*CLRPAP
Trigger: CGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCT...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCAGCCACCTGAGCCTGTaGTTGGGCAGCCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGSHLSL*LGSLGS
Trigger: GCTGCCGAGGCTGCCCAACCACAGGCTCAGGTGGCT...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCGGCATCCTTGGCCCTaGACATCTTGGAACACACCA +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLRHPWP*TSWNTP
Trigger: TGGTGTGTTCCAAGATGTCCAGGGCCAAGGATGCCG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATCTAGGTAACCAGTTCTaGAAGGTGCTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDLGNQF*KVLRPV
Trigger: CACTGGCCTCAGCACCTTCCAGAACTGGTTACCTAG...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCTGGCCGTGCTGCAGGTaGCTCACCGCGTGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSWPCCR*LTACSN
Trigger: ATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCA...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCCTTCTGGAGCCTGCTaGGCCTTTTCAATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLPSGAC*AFSISL
Trigger: CAGGCTGATTGAAAAGGCCCAGCAGGCTCCAGAAGG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCGCATCCCGCTCCTCCTaGACAGCAGCGTCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGASRSS*TAASSA
Trigger: TGCGGAGGACGCTGCTGTCCAGGAGGAGCGGGATGC...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGATTGCAGTGCTTGCTTaGGGACTTCAAGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWIAVLA*GLQGKA
Trigger: AGCCTTCCCTTGAAGTCCCCAAGCAAGCACTGCAAT...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATAGTAGCAGCCTGCCTTaGGATGATGATGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDSSSLP*DDDGSV
Trigger: GACACTGCCATCATCATCCCAAGGCAGGCTGCTACT...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCCCAGCCTCCACGACCTaGGCTAGCCTGAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGPASTT*ASLRAR
Trigger: CCGTGCTCTCAGGCTAGCCCAGGTCGTGGAGGCTGG...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGGCCCCATGCTTGGTTaGCTGGACGTGAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSGPMLG*LDVSCS
Trigger: ACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGTAAGAATTAGGCTGTaGTGTGGCGGGAAGGGACTT +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWVRIRL*CGGKGL
Trigger: AAGTCCCTTCCCGCCACACCACAGCCTAATTCTTAC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGAGTAAGAATTAGGCTGTaGTGTGGCGGGAAGGGACTT +
Preference number: 4 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRVRIRL*CGGKGL
Trigger: AAGTCCCTTCCCGCCACACCACAGCCTAATTCTTAC...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCAGCGTTCAGGGAGCATaGGCCTCAGGGGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGSVQGA*ASGASL
Trigger: GAGGCTGGCCCCTGAGGCCCATGCTCCCTGAACGCT...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCCGTCTCCCTTCGTCTaGAGCAGACATAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQPSPFV*SRHSEN
Trigger: GTTCTCACTATGTCTGCTCCAGACGAAGGGAGACGG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633942.1
3UTR CAA 72 bp GGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTaGCTCATTCCACAGTGGCGTCTCGTGTTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: GTVPSKSPRAPK*LIPQWRLVFVV
Trigger: GACGACAAACACGAGACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGGTTCTCTTACCGGGTaGGTGGGGATATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHGSLTG*VGIWLP
Trigger: AGGAAGCCATATCCCCACTCACCCGGTAAGAGAACC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCCCATGGGTGTCGGGCTaGGGAGAAGGCTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGPWVSG*GEGLGR
Trigger: CCTTCCCAAGCCTTCTCCTCAGCCCGACACCCATGG...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCTGCTTTTCCGAAGGTTaGAGCTCCTTCTCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCACFSEG*SSFSVH
Trigger: ATGGACGGAGAAGGAGCTGCAACCTTCGGAAAAGCA...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCCAGGCTGGGCACGCTaGTTTTTCTCTTTCCTAATT +
Preference number: 4 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWPGWAR*FFSFLI
Trigger: AATTAGGAAAGAGAAAAAGCAGCGTGCCCAGCCTGG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATTTCTCTTTCCTCCTCTaGATAAGGGGCTGTCACGTG +
Preference number: 4 (lower is better)
Translates to: APLIAGGPCCRTGRALLDFSFLL*IRGCHV
Trigger: CACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAA...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCATGGCCCTGGACATCTTaGAACACACCAGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPWPWTS*NTPGLW
Trigger: CCAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCA...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCCGGCATCCTTGGCCCTaGACATCTTGGAACACACCA +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSRHPWP*TSWNTP
Trigger: TGGTGTGTTCCAAGATGTCCAGGGCCAAGGATGCCG...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCGTGTCCAGGCCTCCCTaGACCACTCCCTTAGCCACG +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGVSRPP*TTPLAT
Trigger: CGTGGCTAAGGGAGTGGTCCAGGGAGGCCTGGACAC...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGTGCACACAGCATCCTTaGTACCAGTTAACACAGTCT +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQCTQHP*YQLTQS
Trigger: AGACTGTGTTAACTGGTACCAAGGATGCTGTGTGCA...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTCACTCAGCACCGTCTTaGCTGTGTCCACACCTGTCT +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLHSAPS*LCPHLS
Trigger: AGACAGGTGTGGACACAGCCAAGACGGTGCTGAGTG...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGCTCCTCCGCATTCATaGGGTGGAAGATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSAPPHS*GGRCPP
Trigger: TGGGGGACATCTTCCACCCCATGAATGCGGAGGAGC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACCCCGTGCTGCAGGACTaGAAGAGCCCTGCTAGATAT +
Preference number: 4 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHPVLQD*KSPARY
Trigger: ATATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGG...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAAGTAGCAGCCTGCCTTaGGATGATGATGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPSSSLP*DDDGSV
Trigger: GACACTGCCATCATCATCCCAAGGCAGGCTGCTACT...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGCAAATGGCTGTGTCTaGCATCCTAGCCTCCGATGG +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLANGCV*HPSLRW
Trigger: CCATCGGAGGCTAGGATGCCAGACACAGCCATTTGC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTGTCACTGGGCCCGTTTaGGACTGGGTTGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSVTGPV*DWVEPS
Trigger: TGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGAC...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCGACCTGGGCTAGCCTaGGAGCACGGGGCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCRPGLA*EHGARR
Trigger: CCGCCGGGCCCCGTGCTCTCAGGCTAGCCCAGGTCG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCATGCAGTCACTGTGCCTaGTTTCTGCAAATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPCSHCA*FLQMAV
Trigger: CACAGCCATTTGCAGAAATCAGGCACAGTGACTGCA...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTCCCTCCAACTCATTCTaGAGCATTGCCAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSPSNSF*SIAKRG
Trigger: CCCACGCTTGGCAATGCTGCAGAATGAGTTGGAGGG...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTAAGCAAGTCACCCCGTaGTCCGAAGTTGCTCATTCC +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLKQVTP*SEVAHS
Trigger: GGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTT...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTAACACACCAGGTCTTTaGCCCCGGACACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WARSQASHPVLRSCSFHSNTPGL*PRTPSA
Trigger: AGCAGATGGTGTCCGGGGCCAAAGACCTGGTGTGTT...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCCCTGGATGGCCTCTTTaGCCAAGTTCACGGCACCGG +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGPGWPL*PSSRHR
Trigger: CCGGTGCCGTGAACTTGGCCAAAGAGGCCATCCAGG...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGATTGCAGTGCTTGCTTaGGGACTTCAAGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLIAVLA*GLQGKA
Trigger: AGCCTTCCCTTGAAGTCCCCAAGCAAGCACTGCAAT...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGTACTATGAGGGAATGTaGTTCTTAAGACCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQYYEGM*FLRPSR
Trigger: CCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTA...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCGCTGCTAGCCGACAGTaGTCTCCAGCGTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGAASRQ*SPAFRE
Trigger: CTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGC...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCCACCCACACACCGTGTaGCTTTGGACAGGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGHPHTV*LWTGSP
Trigger: AGGGGAACCTGTCCAAAGTCACACGGTGTGTGGGTG...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCCTAATTGCAGTGCTTaGTTGGGGACTTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLPNCSA*LGTSRE
Trigger: TTCCCTTGAAGTCCCCAAGCAAGCACTGCAATTAGG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCAACTGTGCCTGATTTCTaGAAATGGCTGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPTVPDF*KWLCLA
Trigger: TGCCAGACACAGCCATTTGCAGAAATCAGGCACAGT...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCGGGTTTGATGCTTCCTaGATCTGGCAGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGGFDAS*IWQPRV
Trigger: GACCCTGGGCTGCCAGATGCAGGAAGCATCAAACCC...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGTGCACACAGCATCCTTaGTACCAGTTAACACAGTCT +
Preference number: 4 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQCTQHP*YQLTQS
Trigger: AGACTGTGTTAACTGGTACCAAGGATGCTGTGTGCA...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCAGTCTCAAGCCAGGCTaGTGCAAAGCCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGSLKPG*CKAPAV
Trigger: CACAGCTGGGGCTTTGCACCAGCCTGGCTTGAGACT...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCAGTCTCAAGCCAGGCTaGTGCAAAGCCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGSLKPG*CKAPAV
Trigger: CACAGCTGGGGCTTTGCACCAGCCTGGCTTGAGACT...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCTTGCTCATTCCACAGTaGCGTCTCGTGTTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: CVLRPETHFQHENGAARSLLIPQ*RLVFVV
Trigger: GACGACAAACACGAGACGCCACTGTGGAATGAGCAA...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCCACGTCCACCACGCTaGCCACCCCGGAGGACACGG +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCPRPPR*PPRRTR
Trigger: CCGTGTCCTCCGGGGTGGCCAGCGTGGTGGACGTGG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCTGCAGCCCGGCGCTTaGGTGGGCCTGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCLQPGA*VGLRTQ
Trigger: CTGGGTCCTCAGGCCCACCCAAGCGCCGGGCTGCAG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
3UTR CAA 72 bp TGCAGGACTGGAAGAGCCCTGCTAGATATAAAAGGGTaGCTAGCGGGGCAAACAGATGCCCTTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CRTGRALLDIKG*LAGQTDALPGW
Trigger: CCAGCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGCTCTTCCAGTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCGACTCCAGTAGTCACTaGATCCTTAGCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGDSSSH*ILSATQ
Trigger: CTGAGTGGCGCTAAGGATGCAGTGACTACTGGAGTC...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGCACACGGTGACCCCTaGGGCCCCTCCACCCTTCCT +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCAHGDP*GPSTLP
Trigger: AGGAAGGGTGGAGGGGCCCCAGGGGTCACCGTGTGC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCTCCGCGAGGCTAGGCTaGGAGGGTGGAGACCAGGCC +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCSARLG*EGGDQA
Trigger: GGCCTGGTCTCCACCCTCCCAGCCTAGCCTCGCGGA...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCTGCTTTTCCGAAGGTTaGAGCTCCTTCTCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGCFSEG*SSFSVH
Trigger: ATGGACGGAGAAGGAGCTGCAACCTTCGGAAAAGCA...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTTACTATGAGGGAATGTaGTTCTTAAGACCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLYYEGM*FLRPSR
Trigger: CCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTA...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCTGAGCGGGGGATTGTaGTGTAGGCCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCLSGGL*CRPSSS
Trigger: GCTGCTGGAGGGCCTACAGCACAATCCCCCGCTCAG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCCCTAATTGCAGTGCTTaGTTGGGGACTTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGPNCSA*LGTSRE
Trigger: TTCCCTTGAAGTCCCCAAGCAAGCACTGCAATTAGG...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCCGAGCTATGTGCGTTaGCCACCAGGTTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCPSYVR*PPGSGQ
Trigger: CTGCCCGGAACCTGGTGGCCAACGCACATAGCTCGG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGTGTCCAGACCCCCTTaGACGGCCCCCTTAGCCATG +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCVSRPP*TAPLAM
Trigger: CATGGCTAAGGGGGCCGTCCAAGGGGGTCTGGACAC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCACCCTGAAAGGCCAGTaGCAGGAGAGCTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCTLKGQ*QESWAG
Trigger: TCCCGCCCAGCTCTCCTGCCACTGGCCTTTCAGGGT...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR TCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGACCCACTTTCAGCATaGGAACGGAGCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCDPLSA*ERSCPE
Trigger: CTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCACTCAGCACCGTCTTaGCTGTGTCCACACCTGTCT +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCHSAPS*LCPHLS
Trigger: AGACAGGTGTGGACACAGCCAAGACGGTGCTGAGTG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR GCA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCCAGGCTGGGCACGCTaGTTTTTCTCTTTCCTAATT +
Preference number: 4 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCPGWAR*FFSFLI
Trigger: AATTAGGAAAGAGAAAAAGCAGCGTGCCCAGCCTGG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp CCACCTGAGCCTGTGGTTGGGCAGCCTCGGCAGCAGGCGCTCCTGTaGGGTCAGCGGCCGGCCGGGCTCTCGCCGAGCTATGTGCGTTGG +
Preference number: 5 (lower is better)
Translates to: PPEPVVGQPRQQALL*GQRPAGLSPSYVRW
Trigger: CCAACGCACATAGCTCGGCGAGAGCCCGGCCGGCCGCTGACCCCACAGGAGCGCCTGCTGCCGAGGCTGCCCAACCACAGGCTCAGGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp CGCTCCTGTGGGGTCAGCGGCCGGCCGGGCTCTCGCCGAGCTATGTaGGTTGGCCACCAGGTTCCGGGCAGAGCTGAAGCCAGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RSCGVSGRPGSRRAM*VGHQVPGRAEARQG
Trigger: TCCCTGCCTGGCTTCAGCTCTGCCCGGAACCTGGTGGCCAACGCACATAGCTCGGCGAGAGCCCGGCCGGCCGCTGACCCCACAGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp CACGATGCCATAGAGCTCACAGAGGCTGTGCCGCGCCCGCCCCACTaGCTGCTGGAGCTCGGCGGGCAGGCCCTGGAGGCTGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: HDAIELTEAVPRPPH*LLELGGQALEAGDQ
Trigger: CTGGTCTCCAGCCTCCAGGGCCTGCCCGCCGAGCTCCAGCAGCCAGTGGGGCGGGCGCGGCACAGCCTCTGTGAGCTCTATGGCATCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGGCCTGGGGCGGCCCCTaGGGTGAACGTCGCCACGTC +
Preference number: 5 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQAWGGP*GERRHV
Trigger: GACGTGGCGACGTTCACCCAAGGGGCCGCCCCAGGC...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGGCAGCCAGCTGAGCTaGCTCCTCCGCATTCATGGG +
Preference number: 5 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAGSQLS*LLRIHG
Trigger: CCCATGAATGCGGAGGAGCAAGCTCAGCTGGCTGCC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp GCCGCTCTGCGGGCAGCTCCTCTACAGAGCCAGCTGAGGCCACGATaGCATAGAGCTCACAGAGGCTGTGCCGCGCCCGCCCCACTGGCT +
Preference number: 5 (lower is better)
Translates to: AALRAAPLQSQLRPR*HRAHRGCAAPAPLA
Trigger: AGCCAGTGGGGCGGGCGCGGCACAGCCTCTGTGAGCTCTATGGCATCGTGGCCTCAGCTGGCTCTGTAGAGGAGCTGCCCGCAGAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp TGCTGTAGGCCCTCCAGCAGCTGCTCTAACCCCTGCCAAGCCTGGTaGACACCCTCGCGGCTCTGCACCAGCCGCTCTGCGGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CCRPSSSCSNPCQAW*TPSRLCTSRSAGSS
Trigger: GGAGCTGCCCGCAGAGCGGCTGGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp GAACCCCGGCATCCCGCTCCTCCTGGACAGCAGCGTCCTCCGCACTaGCACCTGAGCCCTGGTCCAGACGTGGCTGCCCTTCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: EPRHPAPPGQQRPPH*HLSPGPDVAALLEP
Trigger: AGGCTCCAGAAGGGCAGCCACGTCTGGACCAGGGCTCAGGTGCCAGTGCGGAGGACGCTGCTGTCCAGGAGGAGCGGGATGCCGGGGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACCGCCGACAGCACCTTaGGCCCAGGCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRPPTAP*AQAGRQ
Trigger: CTGCCTCCCAGCCTGGGCCAAAGGTGCTGTCGGCGG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GAGCACGGGGCCCGGCGGCCGGGTCCGCCACCACCAGTGTCTCTGATGCCTGCAGGAACCGATCCAGGTTaGGGGGCGGGGAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: EHGARRPGPPPPVSLMPAGTDPG*GAGRKF
Trigger: GAACTTTCTCCCCGCCCCCAAACCTGGATCGGTTCC...TGCAGGCATCAGAGACACTGGTGGTGGCGGACCCGGCCGCCGGGCCCCGTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS TCA 90 bp GCTCTGCACCAGCCGCTCTGCGGGCAGCTCCTCTACAGAGCCAGCTaGGGCCACGATGCCATAGAGCTCACAGAGGCTGTGCCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: ALHQPLCGQLLYRAS*GHDAIELTEAVPRP
Trigger: CGGGCGCGGCACAGCCTCTGTGAGCTCTATGGCATCGTGGCCTCAGCTGGCTCTGTAGAGGAGCTGCCCGCAGAGCGGCTGGTGCAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp GCGGGCAAGGCGAAGGGCCCTACCAGCCAGCTGAGCGGGGGATTGTaGTGTAGGCCCTCCAGCAGCTGCTCTAACCCCTGCCAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: AGKAKGPTSQLSGGL*CRPSSSCSNPCQAW
Trigger: CCAGGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCACAATCCCCCGCTCAGCTGGCTGGTAGGGCCCTTCGCCTTGCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp TTGTGCTGTAGGCCCTCCAGCAGCTGCTCTAACCCCTGCCAAGCCTaGTGCACACCCTCGCGGCTCTGCACCAGCCGCTCTGCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LCCRPSSSCSNPCQA*CTPSRLCTSRSAGS
Trigger: GCTGCCCGCAGAGCGGCTGGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGGCCGAGCTATGTGCGTaGGCCACCAGGTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEAELCA*ATRFRA
Trigger: TGCCCGGAACCTGGTGGCCAACGCACATAGCTCGGC...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGCCCATAAGCACAGCCTaGGAGGCGTCCACGCCGGTC +
Preference number: 5 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQPISTA*EASTPV
Trigger: GACCGGCGTGGACGCCTCCAAGGCTGTGCTTATGGG...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGCACCTGAGGCAGTCCTaGCCGTGCCAGCTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWHLRQS*PCQLPR
Trigger: CCGGGGAAGCTGGCACGGCAAGGACTGCCTCAGGTG...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp AGCTGCTCTAACCCCTGCCAAGCCTGGTGCACACCCTCGCGGCTCTaGACCAGCCGCTCTGCGGGCAGCTCCTCTACAGAGCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SCSNPCQAWCTPSRL*TSRSAGSSSTEPAE
Trigger: CTCAGCTGGCTCTGTAGAGGAGCTGCCCGCAGAGCGGCTGGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp AGCGGGGGATTGTGCTGTAGGCCCTCCAGCAGCTGCTCTAACCCCTaGCAAGCCTGGTGCACACCCTCGCGGCTCTGCACCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SGGLCCRPSSSCSNP*QAWCTPSRLCTSRS
Trigger: AGAGCGGCTGGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCACAATCCCCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp AGCTGGGCCAGAGTGTCCCTGGCTTGGAACTGGCCGTGCTGCAGGTaGCTCACCGCGTGTTCAAATGCCCGCTGGCGGAAGCTGGGACCC +
Preference number: 5 (lower is better)
Translates to: SWARVSLAWNWPCCR*LTACSNARWRKLGP
Trigger: GGGTCCCAGCTTCCGCCAGCGGGCATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCACCTGAGCCTGTGGTaGGGCAGCCTCGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQHLSLW*GSLGSR
Trigger: CCTGCTGCCGAGGCTGCCCAACCACAGGCTCAGGTG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCCTGGATGGCCTCTTaGGCCAAGTTCACGGCACCG +
Preference number: 5 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEPWMAS*AKFTAP
Trigger: CGGTGCCGTGAACTTGGCCAAAGAGGCCATCCAGGG...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGCCTGGGGCGGCCCCTaGGGTGAACGTCGCCACGTC +
Preference number: 5 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHAWGGP*GERRHV
Trigger: GACGTGGCGACGTTCACCCAAGGGGCCGCCCCAGGC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTCACCTGAGGCAGTCCTaGCCGTGCCAGCTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: LRAAASRQWSPAFREHGPHLRQS*PCQLPR
Trigger: CCGGGGAAGCTGGCACGGCAAGGACTGCCTCAGGTG...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGCCGTTTGGGACTGGGTaGAGCCATCAGGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQPFGTG*SHQATV
Trigger: CACGGTGGCCTGATGGCTCAACCCAGTCCCAAACGG...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCGTTTGGGACTGGGTaGAGCCATCAGGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEPFGTG*SHQATV
Trigger: CACGGTGGCCTGATGGCTCAACCCAGTCCCAAACGG...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp TCCTGGAGCTGGGCCAGAGTGTCCCTGGCTTGGAACTGGCCGTGCTaGAGGTGGCTCACCGCGTGTTCAAATGCCCGCTGGCGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SWSWARVSLAWNWPC*RWLTACSNARWRKL
Trigger: CAGCTTCCGCCAGCGGGCATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp CAGTCCTGGAGCTGGGCCAGAGTGTCCCTGGCTTGGAACTGGCCGTaGTGCAGGTGGCTCACCGCGTGTTCAAATGCCCGCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QSWSWARVSLAWNWP*CRWLTACSNARWRK
Trigger: CTTCCGCCAGCGGGCATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TTCCCTGCGGGGAAGTCCTTTGTCTGTGTTCTCCAGGGGCAGCTGCTGGGCCCACACCTGAGCCTGTGGTaGGGCAGCCTCGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FPAGKSFVCVLQGQLLGPHLSLW*GSLGSR
Trigger: CCTGCTGCCGAGGCTGCCCAACCACAGGCTCAGGTG...TGGGCCCAGCAGCTGCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCCCATAAGCACAGCCTaGGAGGCGTCCACGCCGGTC +
Preference number: 5 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQPISTA*EASTPV
Trigger: GACCGGCGTGGACGCCTCCAAGGCTGTGCTTATGGG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp ACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAAGAGAACGGGGCCTCTaGGGGGCTCAGGGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: TALPAPLIAGGPCCRTGRRERGL*GAQGSL
Trigger: CAGACTGCCCTGAGCCCCCAAGAGGCCCCGTTCTCT...TCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGGCAGCCAGCTGAGCTaGCTCCTCCGCATTCATGGG +
Preference number: 5 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWGSQLS*LLRIHG
Trigger: CCCATGAATGCGGAGGAGCAAGCTCAGCTGGCTGCC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGCAGCTGAGCGGGGGATaGTGCTGTAGGCCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTQLSGG*CCRPSS
Trigger: GCTGGAGGGCCTACAGCACAATCCCCCGCTCAGCTG...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTTCTGCAGCCCGGCGCTaGGGTGGGCCTGAGGACCCA +
Preference number: 5 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLSAARR*GGPEDP
Trigger: TGGGTCCTCAGGCCCACCCAAGCGCCGGGCTGCAGA...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTCGGCCCCATGCTTGGTaGGCTGGACGTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LRAAASRQWSPAFREHGPRPHAW*AGRELQ
Trigger: CTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCG...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGCTGGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCCCGTGCTCCGAAGTaGCTCATTCCACAGTGGCGT +
Preference number: 5 (lower is better)
Translates to: LSWGAGGSVTGPVWDWVEPRAPK*LIPQWR
Trigger: ACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGG...CTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCCAGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 90 bp GCAGCGTCCTCCGCACTGGCACCTGAGCCCTGGTCCAGACGTGGCTaGCCTTCTGGAGCCTGCTGGGCCTTTTCAATCAGCCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: AASSALAPEPWSRRG*PSGACWAFSISLKQ
Trigger: CTGCTTCAGGCTGATTGAAAAGGCCCAGCAGGCTCCAGAAGGGCAGCCACGTCTGGACCAGGGCTCAGGTGCCAGTGCGGAGGACGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp CGTCCACCACGCTGGCCACCCCGGAGGACACGGCATCCTTGGCCCTaGACATCTTGGAACACACCAGGTCTTTGGCCCCGGACACCATCT +
Preference number: 5 (lower is better)
Translates to: RPPRWPPRRTRHPWP*TSWNTPGLWPRTPS
Trigger: AGATGGTGTCCGGGGCCAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCTCCGGGGTGGCCAGCGTGGTGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp CTGAAGCAGTCCTGGAGCTGGGCCAGAGTGTCCCTGGCTTGGAACTaGCCGTGCTGCAGGTGGCTCACCGCGTGTTCAAATGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LKQSWSWARVSLAWN*PCCRWLTACSNARW
Trigger: CCAGCGGGCATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCCCTGGATGGCCTCTTaGGCCAAGTTCACGGCACCG +
Preference number: 5 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQPWMAS*AKFTAP
Trigger: CGGTGCCGTGAACTTGGCCAAAGAGGCCATCCAGGG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGTCAGTCGCAAGGCCCTaGGTAGTGGCTGCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQSVARP*VVAAAS
Trigger: GGAAGCCGCAGCCACTACCAAGGGCCTTGCGACTGA...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCAGCTGAGCGGGGGATaGTGCTGTAGGCCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLQLSGG*CCRPSS
Trigger: GCTGGAGGGCCTACAGCACAATCCCCCGCTCAGCTG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GATGCCACAGCACTGCCTGCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAACCGATCCAGGTTaGGGGGCGGGGAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: DATALPAPLIAGGPCCRTGTDPG*GAGRKF
Trigger: GAACTTTCTCCCCGCCCCCAAACCTGGATCGGTTCC...AGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGCAGGCAGTGCTGTGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp GGAGCCTGCTGGGCCTTTTCAATCAGCCTGAAGCAGTCCTGGAGCTaGGCCAGAGTGTCCCTGGCTTGGAACTGGCCGTGCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GACWAFSISLKQSWS*ARVSLAWNWPCCRW
Trigger: CCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTTCAGGCTGATTGAAAAGGCCCAGCAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CCCTGGGTCTGGGGTTCCTGGGCTCGTGTCCTAGGAGAGCATGGAAAGGGGACGGAACACACCAGGTCTTaGGCCCCGGACACCATCTGC +
Preference number: 5 (lower is better)
Translates to: PWVWGSWARVLGEHGKGTEHTRS*APDTIC
Trigger: GCAGATGGTGTCCGGGGCCAAAGACCTGGTGTGTTC...CGTCCCCTTTCCATGCTCTCCTAGGACACGAGCCCAGGAACCCCAGACCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CCCGCTGGACTGAGCGCAGCCACGGCACGTCTCACACCCGACCTGAGCCTGCCATTGGCCCTGGACATCTaGGAACACACCAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PAGLSAATARLTPDLSLPLALDI*EHTRSL
Trigger: CAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAA...TGGCAGGCTCAGGTCGGGTGTGAGACGTGCCGTGGCTGCGCTCAGTCCAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTGTCCAGACCCCCTaGGACGGCCCCCTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLGVQTP*DGPLSH
Trigger: ATGGCTAAGGGGGCCGTCCAAGGGGGTCTGGACACC...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGGTCTGCTCCCCACCATaGTCTGTGGTCCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWVCSPP*SVVLEL
Trigger: CAGTTCCAGGACCACAGACAATGGTGGGGAGCAGAC...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGCTGCGGCCCCATGCTTGGTTGGCTGGACGTGAGCTGCAGTCACTGTGCCCTGCGGGGAAGTCCTTaGTCTGTGTTCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LSCGPMLGWLDVSCSHCALRGSP*SVFSRG
Trigger: GCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAG...GGCACAGTGACTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCGCAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp GGACACCATCTGCTTTTCCGAAGGTTGCAGCTCCTTCTCCGTCCATaGGGCCGTCTGCTCTGGGTGGGCAGCCACCTGAGCCTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GHHLLFRRLQLLLRP*GRLLWVGSHLSLWL
Trigger: CAACCACAGGCTCAGGTGGCTGCCCACCCAGAGCAGACGGCCCCATGGACGGAGAAGGAGCTGCAACCTTCGGAAAAGCAGATGGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp GCTGCAGGTGGCTCACCGCGTGTTCAAATGCCCGCTGGCGGAAGCTaGGACCCAGGTCACCTAAACGAACGAAGTAGCTCCCCTGTTCCG +
Preference number: 5 (lower is better)
Translates to: AAGGSPRVQMPAGGS*DPGHLNERSSSPVP
Trigger: CGGAACAGGGGAGCTACTTCGTTCGTTTAGGTGACCTGGGTCCCAGCTTCCGCCAGCGGGCATTTGAACACGCGGTGAGCCACCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 90 bp ATCAGCCTGAAGCAGTCCTGGAGCTGGGCCAGAGTGTCCCTGGCTTaGAACTGGCCGTGCTGCAGGTGGCTCACCGCGTGTTCAAATGCC +
Preference number: 5 (lower is better)
Translates to: ISLKQSWSWARVSLA*NWPCCRWLTACSNA
Trigger: GGCATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTTCAGGCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGAGGACACGGCATCCTaGGCCCTGGACATCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LRAAASRQWSPAFREHGPEDTAS*ALDILE
Trigger: TTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCTC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTGTCTGCTCCCCACCATaGTCTGTGGTCCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: LRAAASRQWSPAFREHGPVCSPP*SVVLEL
Trigger: CAGTTCCAGGACCACAGACAATGGTGGGGAGCAGAC...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCCAGAGTGTCCCTGGCTaGGAACTGGCCGTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: CVLRPETHFQHENGAARSQSVPG*ELAVLQ
Trigger: CTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTG...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGCTGCGGGGAAGTCCTTaGTCTGTGTTCTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLLRGSP*SVFSRG
Trigger: GCCCCTGGAGAACACAGACAAAGGACTTCCCCGCAG...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGACAAACCAGGGCATCTAAGCTGTGCTGCCTGCGCCCTGCCCCGCACCCACGACTTGGTTTTCTAGCATaGCTGGTGCAGTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: GQTRASKLCCLRPAPHPRLGFLA*LVQWGP
Trigger: AGGCCCCCACTGCACCAGCAATGCTAGAAAACCAAG...TCGTGGGTGCGGGGCAGGGCGCAGGCAGCACAGCTTAGATGCCCTGGTTTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp CTGAGAGCCGCTGCTAGCCGACAGTGGTCTCCAGCGTTCAGGGAGCATGGGCCTCTGCTTTTCCGAAGGTaGCAGCTCCTTCTCCGTCCA +
Preference number: 5 (lower is better)
Translates to: LRAAASRQWSPAFREHGPLLFRR*QLLLRP
Trigger: TGGACGGAGAAGGAGCTGCAACCTTCGGAAAAGCAG...AGGCCCATGCTCCCTGAACGCTGGAGACCACTGTCGGCTAGCAGCGGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGTTGGCCCTGGACATCTaGGAACACACCAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWLALDI*EHTRSL
Trigger: CAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAA...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGGGCGCAGGCGGCAGTGTCACTGGGCCCGTTTGGGACTGGGTTGAGCCATCAGCTGCACACAGCATCCTaGGTACCAGTTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: GAQAAVSLGPFGTGLSHQLHTAS*VPVNTV
Trigger: GACTGTGTTAACTGGTACCAAGGATGCTGTGTGCAG...CTGATGGCTCAACCCAGTCCCAAACGGGCCCAGTGACACTGCCGCCTGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGGGCACGGTCCCAAGCAAGTCACCCCGTGCTCCGAAGTTGCTCATTCCACAGTTCAGTCGCAAGGCCCTaGGTAGTGGCTGCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: WARSQASHPVLRSCSFHSSVARP*VVAAAS
Trigger: GGAAGCCGCAGCCACTACCAAGGGCCTTGCGACTGA...ACTGTGGAATGAGCAACTTCGGAGCACGGGGTGACTTGCTTGGGACCGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTGGTTGGACTCATTCTGCAGCATaGCCAAGCGTGGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GCGVAGRDFLSCGPMLGWTHSAA*PSVGLL
Trigger: AAGAAGCCCCACGCTTGGCAATGCTGCAGAATGAGT...CCAACCAAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GCACCGCTGATAGCTGGGGGCCCGTGCTGCAGGACTGGAAGAGCCCTGCTAGATTTCAAGGGAAGGCTCTaGGCTGGTGGTCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: APLIAGGPCCRTGRALLDFKGRL*AGGLSD
Trigger: GTCACTCAGACCACCAGCCAAGAGCCTTCCCTTGAA...ATCTAGCAGGGCTCTTCCAGTCCTGCAGCACGGGCCCCCAGCTATCAGCGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TCCCACTCGGGGCTTCTCTTTCCTCCTCTGCATAAGGGGCTGTCACGTGGGCACGAGGACACGGCATCCTaGGCCCTGGACATCTTGGAA +
Preference number: 5 (lower is better)
Translates to: SHSGLLFPPLHKGLSRGHEDTAS*ALDILE
Trigger: TTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCTC...GTGCCCACGTGACAGCCCCTTATGCAGAGGAGGAAAGAGAAGCCCCGAGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCGGTGTCCAGACCCCCTaGGACGGCCCCCTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGGVQTP*DGPLSH
Trigger: ATGGCTAAGGGGGCCGTCCAAGGGGGTCTGGACACC...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GCCCTGCTAGATATAAAAGGGTTGCTAGCGGGGCAAACAGATGCCCTTCCAGGCAGAGAACGGGGCCTCTaGGGGGCTCAGGGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: ALLDIKGLLAGQTDALPGRERGL*GAQGSL
Trigger: CAGACTGCCCTGAGCCCCCAAGAGGCCCCGTTCTCT...GCCTGGAAGGGCATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAGCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGGCGTCTCGTGTTTGTCGTCCTGCCCAGCGTAGCCGAGTTGCCTCCGTCCCAGCTGCACACAGCATCCTaGGTACCAGTTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: WRLVFVVLPSVAELPPSQLHTAS*VPVNTV
Trigger: GACTGTGTTAACTGGTACCAAGGATGCTGTGTGCAG...CTGGGACGGAGGCAACTCGGCTACGCTGGGCAGGACGACAAACACGAGACGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTTTCAAGGGAAGGCTCTaGGCTGGTGGTCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLFKGRL*AGGLSD
Trigger: GTCACTCAGACCACCAGCCAAGAGCCTTCCCTTGAA...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGAATTGCAGTGCTTGCTaGGGGACTTCAAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLNCSAC*GTSREG
Trigger: GCCTTCCCTTGAAGTCCCCAAGCAAGCACTGCAATT...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCCCCCGTGCTCCGAAGTaGCTCATTCCACAGTGGCGT +
Preference number: 5 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGPRAPK*LIPQWR
Trigger: ACGCCACTGTGGAATGAGCAACTTCGGAGCACGGGG...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCCGCCGACAGCACCTTaGGCCCAGGCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCPPTAP*AQAGRQ
Trigger: CTGCCTCCCAGCCTGGGCCAAAGGTGCTGTCGGCGG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGGGGCCAGCCTCGACTCACCCCAGCTGTGTCACCCACACACCGTGTGACTTTGTGCCAAAGGTGTTCTTaGTACCTGTCGCGATATTTT +
Preference number: 5 (lower is better)
Translates to: RGQPRLTPAVSPTHRVTLCQRCS*YLSRYF
Trigger: AAAATATCGCGACAGGTACAAAGAACACCTTTGGCA...CAAAGTCACACGGTGTGTGGGTGACACAGCTGGGGTGAGTCGAGGCTGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp GAATTAGGCTGTGGTGTGGCGGGAAGGGACTTCCTGAGCTGCGGCCCCATGCTTCTAGATATAAAAGGGTaGCTAGCGGGGCAAACAGAT +
Preference number: 5 (lower is better)
Translates to: ELGCGVAGRDFLSCGPMLLDIKG*LAGQTD
Trigger: ATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAG...AAGCATGGGGCCGCAGCTCAGGAAGTCCCTTCCCGCCACACCACAGCCTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp TGTGTGCTAAGGCCGGAGACCCACTTTCAGCATGAGAACGGAGCTGCCCGGAGCCTAGATATAAAAGGGTaGCTAGCGGGGCAAACAGAT +
Preference number: 5 (lower is better)
Translates to: CVLRPETHFQHENGAARSLDIKG*LAGQTD
Trigger: ATCTGTTTGCCCCGCTAGCAACCCTTTTATATCTAG...GCTCCGGGCAGCTCCGTTCTCATGCTGAAAGTGGGTCTCCGGCCTTAGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGCCGAGCTATGTGCGTaGGCCACCAGGTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCAELCA*ATRFRA
Trigger: TGCCCGGAACCTGGTGGCCAACGCACATAGCTCGGC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCGGCCCCATGCTTGGTaGGCTGGACGTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCRPHAW*AGRELQ
Trigger: CTGCAGCTCACGTCCAGCCAACCAAGCATGGGGCCG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCGAACACACCAGGTCTTaGGCCCCGGACACCATCTGC +
Preference number: 5 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCEHTRS*APDTIC
Trigger: GCAGATGGTGTCCGGGGCCAAAGACCTGGTGTGTTC...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGAGCATGGAAAGGGGACGACAAGGTTCTCTTACCGGGTGAGTGGGGATATGGCTGCCAAAGGTGTTCTTaGTACCTGTCGCGATATTTT +
Preference number: 5 (lower is better)
Translates to: RAWKGDDKVLLPGEWGYGCQRCS*YLSRYF
Trigger: AAAATATCGCGACAGGTACAAAGAACACCTTTGGCA...GCCATATCCCCACTCACCCGGTAAGAGAACCTTGTCGTCCCCTTTCCATGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCCTTGGTTTTCTAGCATaGCTGGTGCAGTGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCLGFLA*LVQWGP
Trigger: AGGCCCCCACTGCACCAGCAATGCTAGAAAACCAAG...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS-3UTR CAA 90 bp AGTACTTTCTACTATGAGGGAATGTGGTTCTTAAGACCCTCAAGGTGTGTGTGCACTCATTCTGCAGCATaGCCAAGCGTGGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: STFYYEGMWFLRPSRCVCTHSAA*PSVGLL
Trigger: AAGAAGCCCCACGCTTGGCAATGCTGCAGAATGAGT...GCACACACACCTTGAGGGTCTTAAGAACCACATTCCCTCATAGTAGAAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 72 bp GGGGTCAGCGGCCGGCCGGGCTCTCGCCGAGCTATGTaGGTTGGCCACCAGGTTCCGGGCAGAGCTGAAGCC +
Preference number: 6 (lower is better)
Translates to: GVSGRPGSRRAM*VGHQVPGRAEA
Trigger: GGCTTCAGCTCTGCCCGGAACCTGGTGGCCAACGCACATAGCTCGGCGAGAGCCCGGCCGGCCGCTGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp ATAGAGCTCACAGAGGCTGTGCCGCGCCCGCCCCACTaGCTGCTGGAGCTCGGCGGGCAGGCCCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: IELTEAVPRPPH*LLELGGQALEA
Trigger: AGCCTCCAGGGCCTGCCCGCCGAGCTCCAGCAGCCAGTGGGGCGGGCGCGGCACAGCCTCTGTGAGCTCTAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 90 bp CCTGTGGGGTCAGCGGCCGGCCGGGCTCTCGCCGAGCTATGTGCGTaGGCCACCAGGTTCCGGGCAGAGCTGAAGCCAGGCAGGGACCCA +
Preference number: 6 (lower is better)
Translates to: PVGSAAGRALAELCA*ATRFRAELKPGRDP
Trigger: TGGGTCCCTGCCTGGCTTCAGCTCTGCCCGGAACCTGGTGGCCAACGCACATAGCTCGGCGAGAGCCCGGCCGGCCGCTGACCCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 72 bp TCAGCGGCCGGCCGGGCTCTCGCCGAGCTATGTGCGTaGGCCACCAGGTTCCGGGCAGAGCTGAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: SAAGRALAELCA*ATRFRAELKPG
Trigger: GCCTGGCTTCAGCTCTGCCCGGAACCTGGTGGCCAACGCACATAGCTCGGCGAGAGCCCGGCCGGCCGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 72 bp CCCTCCAGCAGCTGCTCTAACCCCTGCCAAGCCTGGTaGACACCCTCGCGGCTCTGCACCAGCCGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: PSSSCSNPCQAW*TPSRLCTSRSA
Trigger: CGCAGAGCGGCTGGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 90 bp CCAGCGGGCAAGGCGAAGGGCCCTACCAGCCAGCTGAGCGGGGGATaGTGCTGTAGGCCCTCCAGCAGCTGCTCTAACCCCTGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: PAGKAKGPTSQLSGG*CCRPSSSCSNPCQA
Trigger: GGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCACAATCCCCCGCTCAGCTGGCTGGTAGGGCCCTTCGCCTTGCCCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS TCA 72 bp CTCCTCCTGGACAGCAGCGTCCTCCGCACTGGCACCTaGGCCCTGGTCCAGACGTGGCTGCCCTTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LLLDSSVLRTGT*ALVQTWLPFWS
Trigger: GCTCCAGAAGGGCAGCCACGTCTGGACCAGGGCTCAGGTGCCAGTGCGGAGGACGCTGCTGTCCAGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 72 bp AACCCCTGCCAAGCCTGGTGCACACCCTCGCGGCTCTaGACCAGCCGCTCTGCGGGCAGCTCCTCTACAGAG +
Preference number: 6 (lower is better)
Translates to: NPCQAWCTPSRL*TSRSAGSSSTE
Trigger: CTCTGTAGAGGAGCTGCCCGCAGAGCGGCTGGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp CATCCCGCTCCTCCTGGACAGCAGCGTCCTCCGCACTaGCACCTGAGCCCTGGTCCAGACGTGGCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: HPAPPGQQRPPH*HLSPGPDVAAL
Trigger: AAGGGCAGCCACGTCTGGACCAGGGCTCAGGTGCCAGTGCGGAGGACGCTGCTGTCCAGGAGGAGCGGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp AGGCCCTCCAGCAGCTGCTCTAACCCCTGCCAAGCCTaGTGCACACCCTCGCGGCTCTGCACCAGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: RPSSSCSNPCQA*CTPSRLCTSRS
Trigger: AGAGCGGCTGGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 72 bp GCGAAGGGCCCTACCAGCCAGCTGAGCGGGGGATTGTaGTGTAGGCCCTCCAGCAGCTGCTCTAACCCCTGC +
Preference number: 6 (lower is better)
Translates to: AKGPTSQLSGGL*CRPSSSCSNPC
Trigger: GCAGGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCACAATCCCCCGCTCAGCTGGCTGGTAGGGCCCTTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp CGCTGGCCACCCCGGAGGACACGGCATCCTTGGCCCTaGACATCTTGGAACACACCAGGTCTTTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RWPPRRTRHPWP*TSWNTPGLWPR
Trigger: CCGGGGCCAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCTCCGGGGTGGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 72 bp GAAGCAGTCCTGGAGCTGGGCCAGAGTGTCCCTGGCTaGGAACTGGCCGTGCTGCAGGTGGCTCACCGCGTG +
Preference number: 6 (lower is better)
Translates to: EAVLELGQSVPG*ELAVLQVAHRV
Trigger: CACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS TCA 72 bp TGTGGGTGGCCCCTGTCGCCACGTTCCCTGACCCCATaGGCCCAGCGGACACTGCGTCTTTGGTTCCGGTCA +
Preference number: 6 (lower is better)
Translates to: CGWPLSPRSLTP*AQRTLRLWFRS
Trigger: TGACCGGAACCAAAGACGCAGTGTCCGCTGGGCTCATGGGGTCAGGGAACGTGGCGACAGGGGCCACCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS GCA 72 bp TTGTGCTGTAGGCCCTCCAGCAGCTGCTCTAACCCCTaGCAAGCCTGGTGCACACCCTCGCGGCTCTGCACC +
Preference number: 6 (lower is better)
Translates to: LCCRPSSSCSNP*QAWCTPSRLCT
Trigger: GGTGCAGAGCCGCGAGGGTGTGCACCAGGCTTGGCAGGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp AAGCAGTCCTGGAGCTGGGCCAGAGTGTCCCTGGCTTaGAACTGGCCGTGCTGCAGGTGGCTCACCGCGTGT +
Preference number: 6 (lower is better)
Translates to: KQSWSWARVSLA*NWPCCRWLTAC
Trigger: ACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 72 bp TCCATGGCCCCTGTGACCCCGCTGGACACCACCTCCTaGGTGCCCGTAAGTGCAGACCGAGTGGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SMAPVTPLDTTS*VPVSADRVVSR
Trigger: CCTGGACACCACTCGGTCTGCACTTACGGGCACCAAGGAGGTGGTGTCCAGCGGGGTCACAGGGGCCATGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 72 bp AAGGCGAAGGGCCCTACCAGCCAGCTGAGCGGGGGATaGTGCTGTAGGCCCTCCAGCAGCTGCTCTAACCCC +
Preference number: 6 (lower is better)
Translates to: KAKGPTSQLSGG*CCRPSSSCSNP
Trigger: GGGGTTAGAGCAGCTGCTGGAGGGCCTACAGCACAATCCCCCGCTCAGCTGGCTGGTAGGGCCCTTCGCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 90 bp TTAGCCACGTCCACCACGCTGGCCACCCCGGAGGACACGGCATCCTaGGCCCTGGACATCTTGGAACACACCAGGTCTTTGGCCCCGGAC +
Preference number: 6 (lower is better)
Translates to: LATSTTLATPEDTAS*ALDILEHTRSLAPD
Trigger: GTCCGGGGCCAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCTCCGGGGTGGCCAGCGTGGTGGACGTGGCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS TCA 72 bp CAGCCGCTCTGCGGGCAGCTCCTCTACAGAGCCAGCTaGGGCCACGATGCCATAGAGCTCACAGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: QPLCGQLLYRAS*GHDAIELTEAV
Trigger: CACAGCCTCTGTGAGCTCTATGGCATCGTGGCCTCAGCTGGCTCTGTAGAGGAGCTGCCCGCAGAGCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp AGAGTGTCCCTGGCTTGGAACTGGCCGTGCTGCAGGTaGCTCACCGCGTGTTCAAATGCCCGCTGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: RVSLAWNWPCCR*LTACSNARWRK
Trigger: CTTCCGCCAGCGGGCATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp CTAGGTAACCAGTTCTGGAAGGTGCTGAGGCCAGTGTaGGTGGCCCCTGTCGCCACGTTCCCTGACCCCATG +
Preference number: 6 (lower is better)
Translates to: LGNQFWKVLRPV*VAPVATFPDPM
Trigger: CATGGGGTCAGGGAACGTGGCGACAGGGGCCACCCACACTGGCCTCAGCACCTTCCAGAACTGGTTACCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp TGCTGCAGGTGGCTCACCGCGTGTTCAAATGCCCGCTaGCGGAAGCTGGGACCCAGGTCACCTAAACGAACG +
Preference number: 6 (lower is better)
Translates to: CCRWLTACSNAR*RKLGPRSPKRT
Trigger: CGTTCGTTTAGGTGACCTGGGTCCCAGCTTCCGCCAGCGGGCATTTGAACACGCGGTGAGCCACCTGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 72 bp TCCACCACGCTGGCCACCCCGGAGGACACGGCATCCTaGGCCCTGGACATCTTGGAACACACCAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: STTLATPEDTAS*ALDILEHTRSL
Trigger: CAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAAGGATGCCGTGTCCTCCGGGGTGGCCAGCGTGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 90 bp AATCAGCCTGAAGCAGTCCTGGAGCTGGGCCAGAGTGTCCCTGGCTaGGAACTGGCCGTGCTGCAGGTGGCTCACCGCGTGTTCAAATGC +
Preference number: 6 (lower is better)
Translates to: NQPEAVLELGQSVPG*ELAVLQVAHRVFKC
Trigger: GCATTTGAACACGCGGTGAGCCACCTGCAGCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTTCAGGCTGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp GGCTCACCGCGTGTTCAAATGCCCGCTGGCGGAAGCTaGGACCCAGGTCACCTAAACGAACGAAGTAGCTCC +
Preference number: 6 (lower is better)
Translates to: GSPRVQMPAGGS*DPGHLNERSSS
Trigger: GGAGCTACTTCGTTCGTTTAGGTGACCTGGGTCCCAGCTTCCGCCAGCGGGCATTTGAACACGCGGTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp TGGGCCTTTTCAATCAGCCTGAAGCAGTCCTGGAGCTaGGCCAGAGTGTCCCTGGCTTGGAACTGGCCGTGC +
Preference number: 6 (lower is better)
Translates to: WAFSISLKQSWS*ARVSLAWNWPC
Trigger: GCACGGCCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTTCAGGCTGATTGAAAAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp GCCTGCTGGGCCTTTTCAATCAGCCTGAAGCAGTCCTaGAGCTGGGCCAGAGTGTCCCTGGCTTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: ACWAFSISLKQS*SWARVSLAWNW
Trigger: CCAGTTCCAAGCCAGGGACACTCTGGCCCAGCTCCAGGACTGCTTCAGGCTGATTGAAAAGGCCCAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CCA 72 bp CCTTGGCCCTGGACATCTTGGAACACACCAGGTCTTTaGCCCCGGACACCATCTGCTTTTCCGAAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: PWPWTSWNTPGL*PRTPSAFPKVA
Trigger: TGCAACCTTCGGAAAAGCAGATGGTGTCCGGGGCCAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1
CDS CAA 72 bp TCCTTGGCCCTGGACATCTTGGAACACACCAGGTCTTaGGCCCCGGACACCATCTGCTTTTCCGAAGGTTGC +
Preference number: 6 (lower is better)
Translates to: SLALDILEHTRS*APDTICFSEGC
Trigger: GCAACCTTCGGAAAAGCAGATGGTGTCCGGGGCCAAAGACCTGGTGTGTTCCAAGATGTCCAGGGCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301286.4
ENST00000633942.1