Pregenerated sensors for PLGLB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000125551Ensembl transcript IDs: ENST00000359481.9
Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCAAAGTTGATCTGTCTGATTCCAAAGTCCTGGTTTTCTCTGAAATGCAGCTTTTTCTGGTTCTTCTGTaGACCTATTTGGGTAACCCC | + |
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Preference number: 2 (lower is better) Translates to: FKVDLSDSKVLVFSEMQLFLVLL*TYLGNP Trigger: GGGGTTACCCAAATAGGTTCACAGAAGAACCAGAAA...AAGCTGCATTTCAGAGAAAACCAGGACTTTGGAATCAGACAGATCAACTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359481.9 |
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| 3UTR-3UTR CAA 90 bp | TTCAAAGTTGATCTGTCTGATTCCAAAGTCCTGGTTTTCTCTGAAATGCAGCTTTTTTACATAAGGGACTaGAGAAGCATGGATTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FKVDLSDSKVLVFSEMQLFYIRD*RSMDFG Trigger: ACCAAAATCCATGCTTCTCAAGTCCCTTATGTAAAA...AAGCTGCATTTCAGAGAAAACCAGGACTTTGGAATCAGACAGATCAACTTTGAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000359481.9 |
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| CDS-3UTR TCA 90 bp | TTCAAAGTTGATCTGTCTGATTCCAAAGTCCTGGTTTTCTCTGAAATGCAGCTTGGCGGGCGGCTCACCTaGGGTCGAGAGTTCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FKVDLSDSKVLVFSEMQLGGRLT*GREFKT Trigger: GGTCTTGAACTCTCGACCTCAGGTGAGCCGCCCGCC...AAGCTGCATTTCAGAGAAAACCAGGACTTTGGAATCAGACAGATCAACTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359481.9 |
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| CDS-3UTR CCA 90 bp | TTCAAAGTTGATCTGTCTGATTCCAAAGTCCTGGTTTTCTCTGAAATGCAGCTTATAATTCAGGTCTGCTaGGCATGGTGGCTCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKVDLSDSKVLVFSEMQLIIQVC*AWWLMP Trigger: AGGCATGAGCCACCATGCCCAGCAGACCTGAATTAT...AAGCTGCATTTCAGAGAAAACCAGGACTTTGGAATCAGACAGATCAACTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359481.9 |
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| CDS-3UTR TCA 90 bp | TTCAAAGTTGATCTGTCTGATTCCAAAGTCCTGGTTTTCTCTGAAATGCAGCTTCCCAGTCTTGCACTCTaGAAGATACATTTACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKVDLSDSKVLVFSEMQLPSLAL*KIHLLF Trigger: GAAAAGTAAATGTATCTTTCAGAGTGCAAGACTGGG...AAGCTGCATTTCAGAGAAAACCAGGACTTTGGAATCAGACAGATCAACTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359481.9 |
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| CDS-3UTR CCA 90 bp | TTCAAAGTTGATCTGTCTGATTCCAAAGTCCTGGTTTTCTCTGAAATGCAGCTTGATGAGAAGACTGAGTaGCAACGTAAAACAAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FKVDLSDSKVLVFSEMQLDEKTE*QRKTKQ Trigger: TTGTTTTGTTTTACGTTGCCACTCAGTCTTCTCATC...AAGCTGCATTTCAGAGAAAACCAGGACTTTGGAATCAGACAGATCAACTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359481.9 |
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| CDS-3UTR CAA 90 bp | TTCAAAGTTGATCTGTCTGATTCCAAAGTCCTGGTTTTCTCTGAAATGCAGCTTAATTGCAAATCTGTCTaGGGGTTAACACTGTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: FKVDLSDSKVLVFSEMQLNCKSV*GLTLCK Trigger: CTTACACAGTGTTAACCCCAAGACAGATTTGCAATT...AAGCTGCATTTCAGAGAAAACCAGGACTTTGGAATCAGACAGATCAACTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359481.9 |
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