Pregenerated sensors for PLG (Homo sapiens)
Ensembl gene IDs: ENSG00000122194Ensembl transcript IDs: ENST00000308192.14, ENST00000366924.6
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR GCA 90 bp | AGGGACTTGAGAAGCATGGATTTTGGTAGCCACAGGGGTCCTGGAACCAATCCCACTGTGATATTGGAATaGCCTGCAGGTGAATTCTTC | + |
Preference number: 4 (lower is better) Translates to: RDLRSMDFGSHRGPGTNPTVILE*PAGEFF Trigger: GAAGAATTCACCTGCAGGGCATTCCAATATCACAGT...GGGATTGGTTCCAGGACCCCTGTGGCTACCAAAATCCATGCTTCTCAAGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366924.6 |
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CDS CCA 90 bp | AGTCACAGGACGGTATCTTACAGTACTCCCACCGCACTTGGCTGTTaGTTGTATGGCACCATGGGGCCCTTTTTCCGTCAGGATTGCGGC | + |
Preference number: 5 (lower is better) Translates to: SHRTVSYSTPTALGC*LYGTMGPFFRQDCG Trigger: GCCGCAATCCTGACGGAAAAAGGGCCCCATGGTGCCATACAACCAACAGCCAAGTGCGGTGGGAGTACTGTAAGATACCGTCCTGTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 90 bp | CAGGTTCTTGTTTGGAAATTTGGAAGGAATGTATCCATGAGCGTGTaGGCTCTGAGAGTCCCAGGCCTGGCATTCCAGTCCAGACATGGT | + |
Preference number: 5 (lower is better) Translates to: QVLVWKFGRNVSMSV*ALRVPGLAFQSRHG Trigger: ACCATGTCTGGACTGGAATGCCAGGCCTGGGACTCTCAGAGCCCACACGCTCATGGATACATTCCTTCCAAATTTCCAAACAAGAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CAA 90 bp | GGAGGTGTTGTGCAGCGGGGGATGTCACAAAGTTCCCAGCGCTTGTaGGGGTCGGTGGTGAAACACCAAGGCCGCAGCTCCCTATCGGGG | + |
Preference number: 6 (lower is better) Translates to: GGVVQRGMSQSSQRL*GSVVKHQGRSSLSG Trigger: CCCCGATAGGGAGCTGCGGCCTTGGTGTTTCACCACCGACCCCAACAAGCGCTGGGAACTTTGTGACATCCCCCGCTGCACAACACCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CAA 72 bp | GTGCAGCGGGGGATGTCACAAAGTTCCCAGCGCTTGTaGGGGTCGGTGGTGAAACACCAAGGCCGCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: VQRGMSQSSQRL*GSVVKHQGRSS Trigger: GGAGCTGCGGCCTTGGTGTTTCACCACCGACCCCAACAAGCGCTGGGAACTTTGTGACATCCCCCGCTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS TCA 72 bp | TGTCACAAAGTTCCCAGCGCTTGTTGGGGTCGGTGGTaGAACACCAAGGCCGCAGCTCCCTATCGGGGTTAC | + |
Preference number: 6 (lower is better) Translates to: CHKVPSACWGRW*NTKAAAPYRGY Trigger: GTAACCCCGATAGGGAGCTGCGGCCTTGGTGTTTCACCACCGACCCCAACAAGCGCTGGGAACTTTGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | CTCCCACCGCACTTGGCTGTTGGTTGTATGGCACCATaGGGCCCTTTTTCCGTCAGGATTGCGGCAGTAGTT | + |
Preference number: 6 (lower is better) Translates to: LPPHLAVGCMAP*GPFSVRIAAVV Trigger: AACTACTGCCGCAATCCTGACGGAAAAAGGGCCCCATGGTGCCATACAACCAACAGCCAAGTGCGGTGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CAA 90 bp | CACAGGACGGTATCTTACAGTACTCCCACCGCACTTGGCTGTTGGTaGTATGGCACCATGGGGCCCTTTTTCCGTCAGGATTGCGGCAGT | + |
Preference number: 6 (lower is better) Translates to: HRTVSYSTPTALGCW*YGTMGPFFRQDCGS Trigger: ACTGCCGCAATCCTGACGGAAAAAGGGCCCCATGGTGCCATACAACCAACAGCCAAGTGCGGTGGGAGTACTGTAAGATACCGTCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | TGTTCCCTTCAGACACTGGTAGGTGGGACCAGAAGATaGTGGAGGTGTTGTGCAGCGGGGGATGTCACAAAG | + |
Preference number: 6 (lower is better) Translates to: CSLQTLVGGTRR*WRCCAAGDVTK Trigger: CTTTGTGACATCCCCCGCTGCACAACACCTCCACCATCTTCTGGTCCCACCTACCAGTGTCTGAAGGGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | ACGGTATCTTACAGTACTCCCACCGCACTTGGCTGTTaGTTGTATGGCACCATGGGGCCCTTTTTCCGTCAG | + |
Preference number: 6 (lower is better) Translates to: TVSYSTPTALGC*LYGTMGPFFRQ Trigger: CTGACGGAAAAAGGGCCCCATGGTGCCATACAACCAACAGCCAAGTGCGGTGGGAGTACTGTAAGATACCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | AGGTGGTGCTGTGGGAGCCAATTGTTCCGTGGATACTaGGGAGGAGTCACAGGACGGTATCTTACAGTACTC | + |
Preference number: 6 (lower is better) Translates to: RWCCGSQLFRGY*GGVTGRYLTVL Trigger: GAGTACTGTAAGATACCGTCCTGTGACTCCTCCCCAGTATCCACGGAACAATTGGCTCCCACAGCACCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | TTAGCTCAGGTGGTGCTGTGGGAGCCAATTGTTCCGTaGATACTGGGGAGGAGTCACAGGACGGTATCTTAC | + |
Preference number: 6 (lower is better) Translates to: LAQVVLWEPIVP*ILGRSHRTVSY Trigger: GTAAGATACCGTCCTGTGACTCCTCCCCAGTATCCACGGAACAATTGGCTCCCACAGCACCACCTGAGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | GTTTGGAAATTTGGAAGGAATGTATCCATGAGCGTGTaGGCTCTGAGAGTCCCAGGCCTGGCATTCCAGTCC | + |
Preference number: 6 (lower is better) Translates to: VWKFGRNVSMSV*ALRVPGLAFQS Trigger: GGACTGGAATGCCAGGCCTGGGACTCTCAGAGCCCACACGCTCATGGATACATTCCTTCCAAATTTCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | TCACAGGACGGTATCTTACAGTACTCCCACCGCACTTaGCTGTTGGTTGTATGGCACCATGGGGCCCTTTTT | + |
Preference number: 6 (lower is better) Translates to: SQDGILQYSHRT*LLVVWHHGALF Trigger: AAAAAGGGCCCCATGGTGCCATACAACCAACAGCCAAGTGCGGTGGGAGTACTGTAAGATACCGTCCTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CAA 72 bp | GTATCTTACAGTACTCCCACCGCACTTGGCTGTTGGTaGTATGGCACCATGGGGCCCTTTTTCCGTCAGGAT | + |
Preference number: 6 (lower is better) Translates to: VSYSTPTALGCW*YGTMGPFFRQD Trigger: ATCCTGACGGAAAAAGGGCCCCATGGTGCCATACAACCAACAGCCAAGTGCGGTGGGAGTACTGTAAGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308192.14 |
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CDS CCA 72 bp | TCTGAGAGTCCCAGGCCTGGCATTCCAGTCCAGACATaGTCTTGGAAATTTTGCCGTCATAGTTTTCTCCAC | + |
Preference number: 6 (lower is better) Translates to: SESPRPGIPVQT*SWKFCRHSFLH Trigger: GTGGAGAAAACTATGACGGCAAAATTTCCAAGACCATGTCTGGACTGGAATGCCAGGCCTGGGACTCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308192.14 |