RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187583

Ensembl transcript IDs: ENST00000379407.7, ENST00000379409.6, ENST00000379410.8, ENST00000480267.1, ENST00000491024.1

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGTaGCCCAGCCTCGCTGGCCAGGGCATCCTTTGGATGGGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: ELRADPVDGQDLPDL*PSLAGQGILWMGPL
Trigger: GAGGGGCCCCATCCAAAGGATGCCCTGGCCAGCGAGGCTGGGTCACAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR TCA 90 bp TCCCACTCCCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTaGGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGTGAC +
Preference number: 1 (lower is better)
Translates to: SHSQRVSSLTPGGLS*GPTLWTARTSLTCD
Trigger: GTCACAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGGGAGTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR GCA 90 bp CGCTGGCCAGGGCATCCTTTGGATGGGGCCCCTCCCACCCTTCCCTaGCCCAGCTGCTGGCACCAAGGAACAGGAGCTGAGGGACGGGCT +
Preference number: 1 (lower is better)
Translates to: RWPGHPLDGAPPTLP*PSCWHQGTGAEGRA
Trigger: AGCCCGTCCCTCAGCTCCTGTTCCTTGGTGCCAGCAGCTGGGGCAGGGAAGGGTGGGAGGGGCCCCATCCAAAGGATGCCCTGGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR CCA 90 bp TTTTCTTTCTCGTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTaGTGCGCGCCAGGCCACACAAGGACCCACCCACCCTCCTCCTCG +
Preference number: 1 (lower is better)
Translates to: FSFSSGGVNVSRAAL*CAPGHTRTHPPSSS
Trigger: CGAGGAGGAGGGTGGGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGAGAAAGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR TCA 90 bp TCCTCGGGGCACCCTGGCTTGTGCTCCTCACACCTTGCTGACCTGTaGCCCTCATGCCCTCTGACCTCACATACTCTGACCCTGCTGACC +
Preference number: 1 (lower is better)
Translates to: SSGHPGLCSSHLADL*PSCPLTSHTLTLLT
Trigger: GGTCAGCAGGGTCAGAGTATGTGAGGTCAGAGGGCATGAGGGTCACAGGTCAGCAAGGTGTGAGGAGCACAAGCCAGGGTGCCCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR CCA 90 bp CCTGGCTGGGTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTaGCTGCTGAGCAGAGAACACATGGATGCAGCACCAATAAAATTC +
Preference number: 1 (lower is better)
Translates to: PGWVLGGGPQDCGRP*LLSREHMDAAPIKF
Trigger: GAATTTTATTGGTGCTGCATCCATGTGTTCTCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCACCCAGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCGGCCAGGACCTCCCTaGCCTGTGACCCAGCCTCGC +
Preference number: 2 (lower is better)
Translates to: PASLLPDSWRAELRADPVRPGPP*PVTQPR
Trigger: GCGAGGCTGGGTCACAGGTCAGGGAGGTCCTGGCCG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGTGGCGAGGGTGGTCCTaGGAACCCACCTCACCGCGG +
Preference number: 2 (lower is better)
Translates to: PASLLPDSWRAELRADPVWRGWS*EPTSPR
Trigger: CCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCA...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR TCA 90 bp GTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACTGGCGAGGGTGGTCCTaGGAACCCACCTCACCGCGG +
Preference number: 2 (lower is better)
Translates to: VRWCQRLPCCPVVRARPHWRGWS*EPTSPR
Trigger: CCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCA...GTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTCTGAGGGACGGGCTCTaGACTCAGGGCCCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: DSWRAELRADPVDGQDLPLRDGL*TQGPRD
Trigger: GTCTCTGGGGCCCTGAGTTCAGAGCCCGTCCCTCAG...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCACCTCCCCGGGAGCCCTaGGTGCAGGTGCAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PRRGLSSKTLRLELWAEAPPREP*VQVQRE
Trigger: CTCCCTCTGCACCTGCACCCAGGGCTCCCGGGGAGG...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTCCAAGGAACAGGAGCTaGGGGACGGGCTCTGAACTC +
Preference number: 2 (lower is better)
Translates to: DSWRAELRADPVDGQDLPPRNRS*GTGSEL
Trigger: GAGTTCAGAGCCCGTCCCTCAGCTCCTGTTCCTTGG...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR TCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAAGGTGGGAAGGTCGGTaGGGGGCCCGAGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PRRGLSSKTLRLELWAEARWEGR*GARGGR
Trigger: TCTGCCACCTCGGGCCCCTCACCGACCTTCCCACCT...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR GCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCACGACCTTCACGCCCGTaGTGCCCTCCCACTCCCAGC +
Preference number: 2 (lower is better)
Translates to: PRRGLSSKTLRLELWAEARPSRP*CPPTPS
Trigger: GCTGGGAGTGGGAGGGCAGCACGGGCGTGAAGGTCG...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR GCA 90 bp TCTTTCTCGTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCACCTTCACGCCCGTGCTaGCCTCCCACTCCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: SFSSGGVNVSRAALWCAPPSRPC*PPTPSE
Trigger: CTCGCTGGGAGTGGGAGGGCAGCACGGGCGTGAAGG...TGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGAGAAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR GCA 90 bp CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAAGCGAAGGCTCTGCCTaGCCCTCCCCAGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LGPRRGLSSKTLRLELWASEGSA*PSPVQQ
Trigger: CTGCTGCACTGGGGAGGGGCAGGCAGAGCCTTCGCT...TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACGAGGGGCAGGTACCCTaGAGCTTGGCGAGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHEGQVP*SLARVV
Trigger: GACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTC...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCGAGGGGCAGGTACCCTaGAGCTTGGCGAGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGEGQVP*SLARVV
Trigger: GACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTC...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCTTCGGTGGCCTCAGATaGAGGGCTGGGCTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGFGGLR*RAGLLG
Trigger: CCCCAGGAGCCCAGCCCTCCATCTGAGGCCACCGAA...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR CAA 90 bp CTCACAGGTGGGCTGGGCTGGCAAGGGCTCCAAGGCCCATCACTCTaGATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LTGGLGWQGLQGPSL*ILKGLWPRPLRALA
Trigger: GGCCAGAGCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTGGAGCCCTTGCCAGCCCAGCCCACCTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR TCA 90 bp GGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGCCAAGGAACAGGAGCTaGGGGACGGGCTCTGAACTC +
Preference number: 2 (lower is better)
Translates to: GPRRGLSSKTLRLELWAEPRNRS*GTGSEL
Trigger: GAGTTCAGAGCCCGTCCCTCAGCTCCTGTTCCTTGG...CTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCCTCCTCGGGGCACCCTaGCTTGTGCTCCTCACACCT +
Preference number: 2 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGLLGAP*LVLLTP
Trigger: AGGTGTGAGGAGCACAAGCCAGGGTGCCCCGAGGAG...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR TCA 90 bp CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCACTCCTCACACCTTGCTaGCCTGTGACCCTCATGCCC +
Preference number: 2 (lower is better)
Translates to: LGPRRGLSSKTLRLELWALLTPC*PVTLMP
Trigger: GGGCATGAGGGTCACAGGTCAGCAAGGTGTGAGGAG...TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR GCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACCTTCCCTGCCCCAGCTaGTGGCACCAAGGAACAGGA +
Preference number: 2 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHLPCPS*WHQGTG
Trigger: TCCTGTTCCTTGGTGCCAGCAGCTGGGGCAGGGAAG...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR CCA 90 bp TCTTTCTCGTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGTGACCCAGCCTCGCTaGCCAGGGCATCCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: SFSSGGVNVSRAALWCAPVTQPR*PGHPLD
Trigger: ATCCAAAGGATGCCCTGGCCAGCGAGGCTGGGTCAC...TGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGAGAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAATCCTCAAAGGACTGTaGCCAAGGCCTCTGCGGGCT +
Preference number: 2 (lower is better)
Translates to: PRRGLSSKTLRLELWAEAILKGL*PRPLRA
Trigger: AGCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGAT...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR CCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTACTTGTAATTTGAAGTaGGTTAGAGGGGCAGGTACC +
Preference number: 2 (lower is better)
Translates to: DSWRAELRADPVDGQDLPTCNLK*VRGAGT
Trigger: GGTACCTGCCCCTCTAACCCACTTCAAATTACAAGT...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGACTTGTAATTTGAAGTaGGTTAGAGGGGCAGGTACC +
Preference number: 2 (lower is better)
Translates to: WRAELRADPVDGQDLPDLTCNLK*VRGAGT
Trigger: GGTACCTGCCCCTCTAACCCACTTCAAATTACAAGT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR-3UTR CCA 90 bp CCAAGGCCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCTTCTTTCTCGTCCGGTaGTGTCAACGTCTCCCGTGC +
Preference number: 2 (lower is better)
Translates to: PRPITLDPQRTVAKASAGFFLVR*CQRLPC
Trigger: GCACGGGAGACGTTGACACCACCGGACGAGAAAGAA...GCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACACTTGTAATTTGAAGTaGGTTAGAGGGGCAGGTACC +
Preference number: 2 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHTCNLK*VRGAGT
Trigger: GGTACCTGCCCCTCTAACCCACTTCAAATTACAAGT...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR TCA 72 bp CAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTaGGGGCCGACCCTGTGGACGGCCAGGACCTCCCTG +
Preference number: 3 (lower is better)
Translates to: QRVSSLTPGGLS*GPTLWTARTSL
Trigger: CAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR CCA 72 bp TCGTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTaGTGCGCGCCAGGCCACACAAGGACCCACCCACCC +
Preference number: 3 (lower is better)
Translates to: SSGGVNVSRAAL*CAPGHTRTHPP
Trigger: GGGTGGGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR CCA 72 bp TCTGTGGCAGAGCCGCGAGCCCCTCCCCGGGAGCCCTaGGTGCAGGTGCAGAGGGAGAATTCGGTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: SVAEPRAPPREP*VQVQRENSVAS
Trigger: TGAGGCCACCGAATTCTCCCTCTGCACCTGCACCCAGGGCTCCCGGGGAGGGGCTCGCGGCTCTGCCACAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR CCA 72 bp TCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCTCTaGCCTGAGACAGCGAAGGCTCTGCCTGCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: SSKDCGQGLCGL*PETAKALPAPP
Trigger: GGGAGGGGCAGGCAGAGCCTTCGCTGTCTCAGGCCAGAGCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR GCA 72 bp TTCTTTCTCGTCCGGTGGTGTCAACGTCTCCCGTGCTaGCCTGTGGTGCGCGCCAGGCCACACAAGGACCCA +
Preference number: 3 (lower is better)
Translates to: FFLVRWCQRLPC*PVVRARPHKDP
Trigger: TGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGAGAAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR-3UTR CAA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGACCCTGACTTGTAATTaGAAGTGGGTTAGAGGGGCA +
Preference number: 3 (lower is better)
Translates to: PASLLPDSWRAELRADPVTLTCN*KWVRGA
Trigger: TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
3UTR GCA 72 bp TTTTTCTTTCTCGTCCGGTGGTGTCAACGTCTCCCGTaGTGCCCTGTGGTGCGCGCCAGGCCACACAAGGAC +
Preference number: 3 (lower is better)
Translates to: FFFLVRWCQRLP*CPVVRARPHKD
Trigger: GTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGAGAAAGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR CCA 72 bp GTGCTGGGTGGGGGTCCTCAAGACTGTGGGAGACCCTaGCTGCTGAGCAGAGAACACATGGATGCAGCACCA +
Preference number: 3 (lower is better)
Translates to: VLGGGPQDCGRP*LLSREHMDAAP
Trigger: TGGTGCTGCATCCATGTGTTCTCTGCTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCCCCACCCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR GCA 72 bp ATTTTACTAAGAAGTTGTTGTTTATCTGAAATCAAATaGAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: ILLRSCCLSEIK*NRTLRFFWGAG
Trigger: CCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCTTAGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
3UTR TCA 72 bp TGGGGAGGTCATTTTACTAAGAAGTTGTTGTTTATCTaGAATCAAATGCAACCGCACCCTGCGTTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: WGGHFTKKLLFI*NQMQPHPAFLL
Trigger: CAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACTTCTTAGTAAAATGACCTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTCCAGGTGCAGTGGGGTaGCAGGGCCGCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPPGAVG*QGRGPL
Trigger: CAGAGGGCCGCGGCCCTGTCACCCCACTGCACCTGG...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTCTGCCGCCGGGTTCGTaGCCTGACGCCGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPLPPGS*PDAVRS
Trigger: GCTGCGGACGGCGTCAGGGCACGAACCCGGCGGCAG...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCCTCTGCCCGGGCCTTaGTCCCGGGTGACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLPLPGP*SRVTGC
Trigger: GCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGGCCCCGGACATCTGTaGCCCTGCGGTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLGPGHL*PCGGRW
Trigger: CCACCTCCCACCGCAGGGTCACAGATGTCCGGGGCC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTCGGCCAGGACCTCCCTaGCCTGTGACCCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPRPGPP*PVTQPR
Trigger: GCGAGGCTGGGTCACAGGTCAGGGAGGTCCTGGCCG...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCGGCCAGGACCTCCCTaGCCTGTGACCCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLRPGPP*PVTQPR
Trigger: GCGAGGCTGGGTCACAGGTCAGGGAGGTCCTGGCCG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCTGCCGCCGGGTTCGTaGCCTGACGCCGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVLPPGS*PDAVRS
Trigger: GCTGCGGACGGCGTCAGGGCACGAACCCGGCGGCAG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGAGCACCAGGAGGGGTaGGGGCAGTGGGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVEHQEG*GQWACG
Trigger: CCCGCAGGCCCACTGCCCGCACCCCTCCTGGTGCTC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGGGGCCCCCTCCCTGTaGGTGACAGCGCGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLGAPSL*VTARRH
Trigger: GTGCCTTCGCGCTGTCACCCACAGGGAGGGGGCCCC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTCCTCCCCGGGAGCCCTaGGTGCAGGTGCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPPPREP*VQVQRE
Trigger: CTCCCTCTGCACCTGCACCCAGGGCTCCCGGGGAGG...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGCAGAGGAGACAAGCTaGGGGGCGTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLAEETS*GASGGC
Trigger: GCAGCCCCCAGACGCCCCTCAGCTTGTCTCCTCTGC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGCAGAGGAGACAAGCTaGGGGGCGTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPAEETS*GASGGC
Trigger: GCAGCCCCCAGACGCCCCTCAGCTTGTCTCCTCTGC...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCTGCCGCCGGGTTCGTaGCCTGACGCCGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAALPPGS*PDAVRS
Trigger: GCTGCGGACGGCGTCAGGGCACGAACCCGGCGGCAG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCGTGCTGCCCTGTGGTaGGCGCCAGGCCACACAAGG +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLRAALW*APGHTR
Trigger: CCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTAGGCCCGGAGCCTCCTaGGGGCCTGAGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPRPGAS*GPEGHS
Trigger: ACTGTGTCCCTCAGGCCCCCAGGAGGCTCCGGGCCT...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGAGGCACCGAGGGGAGTaGGCTCGAGGGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVRHRGE*ARGRGS
Trigger: GGACCCACGCCCTCGAGCCCACTCCCCTCGGTGCCT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAGGCACCGAGGGGAGTaGGCTCGAGGGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VRWCQRLPCCPVVRARPHRHRGE*ARGRGS
Trigger: GGACCCACGCCCTCGAGCCCACTCCCCTCGGTGCCT...GTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTAGCCTCCTGGGGGCCTaGGGGACACAGTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPSLLGA*GTQWLF
Trigger: GAACAGCCACTGTGTCCCTCAGGCCCCCAGGAGGCT...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACGCCGGGTTCGTGCCCTaGCGCCGTCCGCAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHAGFVP*RRPQPG
Trigger: ACCCGGCTGCGGACGGCGTCAGGGCACGAACCCGGC...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGCCGGGTTCGTGCCCTaGCGCCGTCCGCAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHAGFVP*RRPQPG
Trigger: ACCCGGCTGCGGACGGCGTCAGGGCACGAACCCGGC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGCCGGGTTCGTGCCCTaGCGCCGTCCGCAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LGPRRGLSSKTLRLELWAAGFVP*RRPQPG
Trigger: ACCCGGCTGCGGACGGCGTCAGGGCACGAACCCGGC...TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCGGCCCCGGACATCTGTaGCCCTGCGGTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAAGPGHL*PCGGRW
Trigger: CCACCTCCCACCGCAGGGTCACAGATGTCCGGGGCC...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGAGCACCAGGAGGGGTaGGGGCAGTGGGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLEHQEG*GQWACD
Trigger: ATCACAGGCCCACTGCCCGCACCCCTCCTGGTGCTC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGAGGCACAGACAGCACTaGCGCCGGGTTCGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLRHRQH*RRVRAL
Trigger: CAGGGCACGAACCCGGCGGCAGTGCTGTCTGTGCCT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGAAGAGCCGGTCCCACTaGTCCTGTGCGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLKSRSH*SCAGRC
Trigger: GCACCTGCCCGCACAGGAGCAGTGGGACCGGCTCTT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCTGTGCAGCGGTGTGTaGTGGGAGGAGCAGCCCACG +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLLCSGV*WEEQPT
Trigger: CGTGGGCTGCTCCTCCCAGCACACACCGCTGCACAG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379407.7
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCTCCGCAGGACCCCTGTaGGGGTGCCGAGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAASAGPL*GCRVAA
Trigger: CGCTGCCACTCGGCACCCCCACAGGGGTCCTGCGGA...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379409.6
CDS-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGTGGGCTCGAGGGCGTaGGTCCACGTGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLVGSRA*VHVHSA
Trigger: TGCAGAGTGCACGTGGACCCACGCCCTCGAGCCCAC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCAGGTCCAGGTGCAGTaGGGTGACAGGGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAAQVQVQ*GDRAAA
Trigger: GGCCGCGGCCCTGTCACCCCACTGCACCTGGACCTG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGAGCCTCCTGGGGGCCTaGGGGACACAGTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVSLLGA*GTQWLF
Trigger: GAACAGCCACTGTGTCCCTCAGGCCCCCAGGAGGCT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGCAGGTGCTGCAGCTTaGCCCTCGAGGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPAGAAA*PSRHRQ
Trigger: CTGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGC...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGTGGGAGCTCCCCCTTaGAGCAAAGCCCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLVGAPP*SKARPA
Trigger: AGCTGGACGGGCTTTGCTTCAAGGGGGAGCTCCCAC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGTGGGAGCTCCCCCTTaGAGCAAAGCCCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPVGAPP*SKARPA
Trigger: AGCTGGACGGGCTTTGCTTCAAGGGGGAGCTCCCAC...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCGAGCCCCGGTGTCTCTaGGCGGCTCTGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAAEPRCL*AALDCR
Trigger: CCTGCAGTCCAGAGCCGCTCAGAGACACCGGGGCTC...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCTGGCGAGGGTGGTCCTaGGAACCCACCTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAAWRGWS*EPTSPR
Trigger: CCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCA...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACCTCGGAGGGGTCTaGGCAGCAAGACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVDLGGV*AARHSG
Trigger: GCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGTGATCTGGAAGGCGTaGTCTCGGGACCCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLVIWKA*SRDPSS
Trigger: GCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCAC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGGGCGTGGGTCCACGTaGACTCTGCATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLGRGST*TLHGTE
Trigger: CTCAGTGCCATGCAGAGTGCACGTGGACCCACGCCC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCGTCCTGGGTCAGGAGTaGCTCTGGGGGCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAAVLGQE*LWGPGK
Trigger: CTTCCCGGGCCCCCAGAGGCACTCCTGACCCAGGAC...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR GCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACTGCGGGCAGTGGGCCTaGGGGCAGGGCAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHCGQWA*GQGREG
Trigger: GCCCTCTCTGCCCTGCCCGCAGGCCCACTGCCCGCA...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR GCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCGGGTGACCGGCTGCTaGCACTGCGTCTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAARVTGC*HCVSAR
Trigger: CCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGTCAGCGAGGGCTTTCTaGAGAAGGAGGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLSARAF*RRRPGA
Trigger: GGCTCCGGGCCTCCTTCTCCAGAAAGCCCTCGCTGA...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCCAGCTCGGCCCGGCTaGGGCAGAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHPARPG*GRAPGG
Trigger: CCCTCCTGGTGCTCTGCCCCAGCCGGGCCGAGCTGG...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGACCCCGAGTCCCAGCTaGTCTGTCCGCCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLTPSPS*SVRLRR
Trigger: TCTCCTCAGGCGGACAGACCAGCTGGGACTCGGGGT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGTGGGCTCGAGGGCGTaGGTCCACGTGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVVGSRA*VHVHSA
Trigger: TGCAGAGTGCACGTGGACCCACGCCCTCGAGCCCAC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGGTCCCGGCTCCTCCTaGGGGACCGACCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVGPGSS*GTDHLS
Trigger: TGACAGATGGTCGGTCCCCCAGGAGGAGCCGGGACC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGAGGGGCAGGTACCCTaGAGCTTGGCGAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVEGQVP*SLARVV
Trigger: GACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCACCTCCCGTGCTGCCCTGTaGTGCGCGCCAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: STSPVLPCGARQATQGPTSRAAL*CAPGHT
Trigger: TGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGA...GGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTACAGCCCCTGAAATGTaGGTCCTTCCGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPTAPEM*VLPSRG
Trigger: CCCACGGCTCGGAAGGACTCACATTTCAGGGGCTGT...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGCAGGTGCTGCAGCTTaGCCCTCGAGGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVAGAAA*PSRHRQ
Trigger: CTGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCACTCTGCATGGCACTaGGGAACTCCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVHSAWH*GTPPGP
Trigger: GGGGCCTGGAGGAGTTCCTCAGTGCCATGCAGAGTG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGGAGCCCCGGTGTCTCTaGGCGGCTCTGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: WTSEGSEQQDTPAGALTAEPRCL*AALDCR
Trigger: CCTGCAGTCCAGAGCCGCTCAGAGACACCGGGGCTC...CGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR TCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTCACCTTGCTGACCTGTaGCCCTCATGCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPHLADL*PSCPLT
Trigger: GGTCAGAGGGCATGAGGGTCACAGGTCAGCAAGGTG...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCCAGGTGCAGTGGGGTaGCAGGGCCGCGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAPGAVG*QGRGPL
Trigger: CAGAGGGCCGCGGCCCTGTCACCCCACTGCACCTGG...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCACTGCGGGCTCTGGCCTaGGACAGCGAAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEALRALA*DSEGSA
Trigger: GGCAGAGCCTTCGCTGTCTCAGGCCAGAGCCCGCAG...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp GGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGGGACCTCGGAGGGGTCTaGGCAGCAAGACACTCCGGC +
Preference number: 4 (lower is better)
Translates to: GPRRGLSSKTLRLELSPRDLGGV*AARHSG
Trigger: GCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTC...CCGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCTGACATCCTGGCTGTaGTGGAACCGCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLLTSWL*WNRSWT
Trigger: GGTCCAGCTGCGGTTCCAGCACAGCCAGGATGTCAG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGCGGGTGACCGGCTGCTaGCACTGCGTCTCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPRRGLSSKTLRLELWAERVTGC*HCVSAR
Trigger: CCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCG...CTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCTCCCGGGTGACCGGCTaGTGCCACTGCGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAASRVTG*CHCVSA
Trigger: AGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGA...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCTCCCGGGTGACCGGCTaGTGCCACTGCGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVNVSRAALWCAPGHTRTSRVTG*CHCVSA
Trigger: AGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGA...GGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGCCTGGAAGTACAGGTaGGCGGGGAATAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPAWKYR*AGNSSR
Trigger: CCTGGAGCTATTCCCCGCCCACCTGTACTTCCAGGC...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCAGCTCGGCCCGGCTaGGGCAGAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPPARPG*GRAPGG
Trigger: CCCTCCTGGTGCTCTGCCCCAGCCGGGCCGAGCTGG...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGTCCTCCAGGTTGATGTaGACGGCACGGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLSSRLM*TARSGS
Trigger: GCTCCCACTCCGTGCCGTCCACATCAACCTGGAGGA...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCGGGGCCCCCTCCCTGTaGGTGACAGCGCGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGGAPSL*VTARRH
Trigger: GTGCCTTCGCGCTGTCACCCACAGGGAGGGGGCCCC...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGACCCCGAGTCCCAGCTaGTCTGTCCGCCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVTPSPS*SVRLRR
Trigger: TCTCCTCAGGCGGACAGACCAGCTGGGACTCGGGGT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGTGGTCAGGGGCATCTaGGCTGCTCTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVVVRGI*AALQAQ
Trigger: CTGAGCCTGGAGAGCAGCCCAGATGCCCCTGACCAC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCCCCTCTCCAAGTCCTaGGTCAGGAGTGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVPLSKS*VRSASG
Trigger: CCCAGAGGCACTCCTGACCCAGGACTTGGAGAGGGG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACCAGGTCCAGGTGCAGTaGGGTGACAGGGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHQVQVQ*GDRAAA
Trigger: GGCCGCGGCCCTGTCACCCCACTGCACCTGGACCTG...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCGTGGGAGCTCCCCCTTaGAGCAAAGCCCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAAVGAPP*SKARPA
Trigger: AGCTGGACGGGCTTTGCTTCAAGGGGGAGCTCCCAC...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCCTTCTCCTCCAGGTTaGTGTGGACGGCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVPSPPG*CGRHGV
Trigger: CACTCCGTGCCGTCCACATCAACCTGGAGGAGAAGG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTGGCCCCGGACATCTGTaGCCCTGCGGTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAGPGHL*PCGGRW
Trigger: CCACCTCCCACCGCAGGGTCACAGATGTCCGGGGCC...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR TCA 90 bp TCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCACCCACTCTGCATGGCACTaGGGAACTCCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: STSPVLPCGARQATQGPTHSAWH*GTPPGP
Trigger: GGGGCCTGGAGGAGTTCCTCAGTGCCATGCAGAGTG...GGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGGAGACCCTGGCTGCTaGGCAGAGAACACATGGATG +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLGDPGC*AENTWM
Trigger: CATCCATGTGTTCTCTGCTCAGCAGCCAGGGTCTCC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGGTCCAGGATGTCCGTaGCCGGGATGTAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPGPGCP*PGCSGR
Trigger: TCTTCCACTACATCCCGGGCACGGACATCCTGGACC...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCGGGTTAGACGGCGCTaGAAAGTCCAGGGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVRVRRR*KVQGSS
Trigger: CGAACTCCCCTGGACTTTGCAGCGCCGTCTAACCCG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379409.6
CDS-3UTR GCA 90 bp TCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCACCTCCTGTGCGGGCAGGTaGTGCAGCTTGACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: STSPVLPCGARQATQGPTSCAGR*CSLTLE
Trigger: CTCGAGGGTCAAGCTGCAGCACCTGCCCGCACAGGA...GGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGGGTCCACGTGCACTCTaGATGGCACTGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLGPRAL*MALRNS
Trigger: GGAGTTCCTCAGTGCCATGCAGAGTGCACGTGGACC...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp ACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGGCCGGGCGTGGGTCCACGTaGACTCTGCATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TSEGSEQQDTPAGALTAAGRGST*TLHGTE
Trigger: CTCAGTGCCATGCAGAGTGCACGTGGACCCACGCCC...GGCCGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCCTTCACGCCCGTGCTaGCCTCCCACTCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHPSRPC*PPTPSE
Trigger: CTCGCTGGGAGTGGGAGGGCAGCACGGGCGTGAAGG...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCGACCTTCACGCCCGTaGTGCCCTCCCACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHRPSRP*CPPTPS
Trigger: GCTGGGAGTGGGAGGGCAGCACGGGCGTGAAGGTCG...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCAAGGCCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCCCTCTGCCCGGGCCTTaGTCCCGGGTGACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRPITLDPQRTVAKASAGPLPGP*SRVTGC
Trigger: GCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGG...GCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACAGGCCCGGAGCCTCCTaGGGGCCTGAGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHRPGAS*GPEGHS
Trigger: ACTGTGTCCCTCAGGCCCCCAGGAGGCTCCGGGCCT...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCAGTCGCTGACATCCTaGCTGTGCTGGAACCGCAGC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVQSLTS*LCWNRS
Trigger: GCTGCGGTTCCAGCACAGCCAGGATGTCAGCGACTG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGAGTCCTTCCGAGCCGTaGGCCTGGAAGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVSPSEP*AWKYRW
Trigger: CCACCTGTACTTCCAGGCCCACGGCTCGGAAGGACT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGAGTGGGCCTGTGATCTaGAAGGCGTGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVSGPVI*KACSRD
Trigger: GTCCCGAGAGCACGCCTTCCAGATCACAGGCCCACT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGCCAGCTCGGCCCGGCTaGGGCAGAGCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEPARPG*GRAPGG
Trigger: CCCTCCTGGTGCTCTGCCCCAGCCGGGCCGAGCTGG...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCATCCGCAGGACCCCTGTaGGGGTGCCGAGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPSAGPL*GCRVAA
Trigger: CGCTGCCACTCGGCACCCCCACAGGGGTCCTGCGGA...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379409.6
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCGTAGTCCTCGTAGCTaGCGCACACCACGCGGATGG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAARSPRS*RTPRGW
Trigger: CCATCCGCGTGGTGTGCGCCAGCTACGAGGACTACG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCGTAGTCCTCGTAGCTaGCGCACACCACGCGGATGG +
Preference number: 4 (lower is better)
Translates to: GVNVSRAALWCAPGHTRTRSPRS*RTPRGW
Trigger: CCATCCGCGTGGTGTGCGCCAGCTACGAGGACTACG...GGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCACCCCGAGTCCCAGCTaGTCTGTCCGCCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAATPSPS*SVRLRR
Trigger: TCTCCTCAGGCGGACAGACCAGCTGGGACTCGGGGT...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAGTGGGCTCGAGGGCGTaGGTCCACGTGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEAVGSRA*VHVHSA
Trigger: TGCAGAGTGCACGTGGACCCACGCCCTCGAGCCCAC...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCAGGCACCGAGGGGAGTaGGCTCGAGGGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TWTSEGSEQQDTPAGALTRHRGE*ARGRGS
Trigger: GGACCCACGCCCTCGAGCCCACTCCCCTCGGTGCCT...GGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCTCCTCGGGGCACCCTaGCTTGTGCTCCTCACACCT +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAALLGAP*LVLLTP
Trigger: AGGTGTGAGGAGCACAAGCCAGGGTGCCCCGAGGAG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCAGGGTGGGGGTCTGTaGCAGAGCCGCGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAQGGGL*QSREPL
Trigger: GAGGGGCTCGCGGCTCTGCCACAGACCCCCACCCTG...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTGCAGCCCCTGCAGGGTaGGGGTCTGTGGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAAAPAG*GSVAEP
Trigger: CGGCTCTGCCACAGACCCCCACCCTGCAGGGGCTGC...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp ACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGGCCGCAGGGGGAGCTGAGTaGCAGGACAGGACTTGGACC +
Preference number: 4 (lower is better)
Translates to: TSEGSEQQDTPAGALTAAAGGAE*QDRTWT
Trigger: GGTCCAAGTCCTGTCCTGCCACTCAGCTCCCCCTGC...GGCCGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR TCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCGGGCAGTGGGCCTGTaGTCTGGAAGGCGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHRAVGL*SGRRAL
Trigger: GAGAGCACGCCTTCCAGATCACAGGCCCACTGCCCG...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379410.8
CDS-3UTR TCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACCGGGCAGTGGGCCTGTaGTCTGGAAGGCGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHRAVGL*SGRRAL
Trigger: GAGAGCACGCCTTCCAGATCACAGGCCCACTGCCCG...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGCACTCTGCATGGCACTaGGGAACTCCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WTSEGSEQQDTPAGALTAHSAWH*GTPPGP
Trigger: GGGGCCTGGAGGAGTTCCTCAGTGCCATGCAGAGTG...CGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR TCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCCAAGGAACAGGAGCTaGGGGACGGGCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAAPRNRS*GTGSEL
Trigger: GAGTTCAGAGCCCGTCCCTCAGCTCCTGTTCCTTGG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCTCCTCACACCTTGCTaGCCTGTGACCCTCATGCCC +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAALLTPC*PVTLMP
Trigger: GGGCATGAGGGTCACAGGTCAGCAAGGTGTGAGGAG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACAGGCACAGACAGCACTaGCGCCGGGTTCGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHRHRQH*RRVRAL
Trigger: CAGGGCACGAACCCGGCGGCAGTGCTGTCTGTGCCT...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGGCACAGACAGCACTaGCGCCGGGTTCGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGRHRQH*RRVRAL
Trigger: CAGGGCACGAACCCGGCGGCAGTGCTGTCTGTGCCT...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCTCCTCCGTCGGCCAATaGTGGCACGGTCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAASSVGQ*WHGQSW
Trigger: CCAACTCTGACCGTGCCAGCATTGGCCGACGGAGGA...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTGTCAACGTCTCCCGTaGTGCCCTGTGGTGCGCGCC +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHCQRLP*CPVVRA
Trigger: GGCGCGCACCACAGGGCAGCACGGGAGACGTTGACA...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCATCAGCGAGGGCTTTCTaGAGAAGGAGGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEASARAF*RRRPGA
Trigger: GGCTCCGGGCCTCCTTCTCCAGAAAGCCCTCGCTGA...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGAGGGGTGCGGGCAGTaGGCCTGTGATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHEGCGQ*ACDLEG
Trigger: GCCTTCCAGATCACAGGCCCACTGCCCGCACCCCTC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379410.8
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCTCCTCCAGGTTGATGTaGACGGCACGGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAASSRLM*TARSGS
Trigger: GCTCCCACTCCGTGCCGTCCACATCAACCTGGAGGA...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAGTGGGAGGTGGCGGGTaGTGTGTAGGGGTCGGCATA +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEAVGGGG*CVGVGI
Trigger: TATGCCGACCCCTACACACCACCCGCCACCTCCCAC...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTCTGTGACCCTGCGGTaGGAGGTGGCGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHSVTLR*EVAGGV
Trigger: CACACCACCCGCCACCTCCCACCGCAGGGTCACAGA...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAGGCACCGAGGGGAGTaGGCTCGAGGGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPERHRGE*ARGRGS
Trigger: GGACCCACGCCCTCGAGCCCACTCCCCTCGGTGCCT...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCACCGCAGGGCTCCCTTCTTaGAGAGCAAGTAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: STSPVLPCGARQATQGPTAGLPS*RASRGQ
Trigger: CTGGCCCCTACTTGCTCTCCAAGAAGGGAGCCCTGC...GGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGGTCCCGGCTCCTCCTaGGGGACCGACCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHGPGSS*GTDHLS
Trigger: TGACAGATGGTCGGTCCCCCAGGAGGAGCCGGGACC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGAGCTGGGGGCACTTCTaGTGGGAGGAAGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLSWGHF*WEEDKV
Trigger: GACTTTGTCTTCCTCCCACCAGAAGTGCCCCCAGCT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGAGGGGCAGGTACCCTaGAGCTTGGCGAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHEGQVP*SLARVV
Trigger: GACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCAAACACCTGTGATCTaGAAGGCGTGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLQTPVI*KACSRD
Trigger: GTCCCGAGAGCACGCCTTCCAGATCACAGGTGTTTG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTGGTCCGGTGTGTGCTaGGAGGAGCAGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHWSGVC*EEQPTV
Trigger: CACCGTGGGCTGCTCCTCCCAGCACACACCGGACCA...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCCTCAGCCTGTGCAGCTaGGTCAGGTCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAALSLCS*VRSRCS
Trigger: ACTGCACCTGGACCTGACCCAGCTGCACAGGCTGAG...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCCCTCAGATGGAGGGCTaGGCTCCTGGGGTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGPQMEG*APGVVP
Trigger: CGGGACAACCCCAGGAGCCCAGCCCTCCATCTGAGG...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTTCGGTGGCCTCAGATaGAGGGCTGGGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHFGGLR*RAGLLG
Trigger: CCCCAGGAGCCCAGCCCTCCATCTGAGGCCACCGAA...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCATCCTCACAGGTGGGCTaGGCTGGCAAGGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEASSQVG*AGKGSK
Trigger: CTTGGAGCCCTTGCCAGCCCAGCCCACCTGTGAGGA...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAGGGGGAGCTGAGTaGCAGGACAGGACTTGGACC +
Preference number: 4 (lower is better)
Translates to: GPRRGLSSKTLRLELWAEAGGAE*QDRTWT
Trigger: GGTCCAAGTCCTGTCCTGCCACTCAGCTCCCCCTGC...CTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGCCCCCTCCCTGTGGGTaGCAGCGCGAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEPPPCG*QREGTA
Trigger: TGCTGTGCCTTCGCGCTGTCACCCACAGGGAGGGGG...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGTGGCGAGGGTGGTCCTaGGAACCCACCTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEWRGWS*EPTSPR
Trigger: CCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCA...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTGAGGGACGGGCTCTaGACTCAGGGCCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPLRDGL*TQGPRD
Trigger: GTCTCTGGGGCCCTGAGTTCAGAGCCCGTCCCTCAG...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGCATCCCAAACACCTGTaGTCTGGAAGGCGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVHPKHL*SGRRAL
Trigger: GAGAGCACGCCTTCCAGATCACAGGTGTTTGGGATG...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR GCA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGACACTCAGGAATGGCTaGTCCAGGTTTTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: WRAELRADPVDGQDLPDLTLRNG*SRFSRW
Trigger: CCAGCGAGAAAACCTGGAGCAGCCATTCCTGAGTGT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACTCCTGTGCGGGCAGGTaGTGCAGCTTGACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHSCAGR*CSLTLE
Trigger: CTCGAGGGTCAAGCTGCAGCACCTGCCCGCACAGGA...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACGTCCCACTGCTCCTGTaGGGGCAGGTGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHVPLLL*GQVLQL
Trigger: AAGCTGCAGCACCTGCCCGCACAGGAGCAGTGGGAC...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGTCCCACTGCTCCTGTaGGGGCAGGTGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHVPLLL*GQVLQL
Trigger: AAGCTGCAGCACCTGCCCGCACAGGAGCAGTGGGAC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp ACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGGCCGGTCCACGTGCACTCTaGATGGCACTGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: TSEGSEQQDTPAGALTAAGPRAL*MALRNS
Trigger: GGAGTTCCTCAGTGCCATGCAGAGTGCACGTGGACC...GGCCGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGGGCGTGGGTCCACGTaGACTCTGCATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHGRGST*TLHGTE
Trigger: CTCAGTGCCATGCAGAGTGCACGTGGACCCACGCCC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCACTTCCCTGCCCCAGCTaGTGGCACCAAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEALPCPS*WHQGTG
Trigger: TCCTGTTCCTTGGTGCCAGCAGCTGGGGCAGGGAAG...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGCCTTCACGCCCGTGCTaGCCTCCCACTCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEPSRPC*PPTPSE
Trigger: CTCGCTGGGAGTGGGAGGGCAGCACGGGCGTGAAGG...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTGTGGCCAAGGCCTCTaGGGGCTCTGGCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHCGQGL*GLWPET
Trigger: TGTCTCAGGCCAGAGCCCGCAGAGGCCTTGGCCACA...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGTGGAAGAGCTTGTTaGCGGCGGCGTCCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGSGRAC*RRRPRF
Trigger: GAAGCGGGGACGCCGCCGCCAACAAGCTCTTCCACT...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCCTGGAAGTACAGGTaGGCGGGGAATAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPRRGLSSKTLRLELWAEAWKYR*AGNSSR
Trigger: CCTGGAGCTATTCCCCGCCCACCTGTACTTCCAGGC...CTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGTGGTCAGGGGCATCTaGGCTGCTCTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHVVRGI*AALQAQ
Trigger: CTGAGCCTGGAGAGCAGCCCAGATGCCCCTGACCAC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGATGTTTCCGAAGTGTaGTCAGGGGCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVDVSEV*SGASGL
Trigger: CAGCCCAGATGCCCCTGACCACACTTCGGAAACATC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAGGTCCCGGCTCCTCCTaGGGGACCGACCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPGPGSS*GTDHLS
Trigger: TGACAGATGGTCGGTCCCCCAGGAGGAGCCGGGACC...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTGGTCCCGGCTCCTCCTaGGGGACCGACCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAGPGSS*GTDHLS
Trigger: TGACAGATGGTCGGTCCCCCAGGAGGAGCCGGGACC...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAGTGACCCAGCCTCGCTaGCCAGGGCATCCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEAVTQPR*PGHPLD
Trigger: ATCCAAAGGATGCCCTGGCCAGCGAGGCTGGGTCAC...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGGTCAGGAGTGCCTCTaGGGGCCCGGGAAGCATCCC +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEGQECL*GPGKHP
Trigger: GGGATGCTTCCCGGGCCCCCAGAGGCACTCCTGACC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR CCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCATGGCACGGTCAGAGTTaGCCTGGTCCGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEAWHGQS*PGPVCA
Trigger: AGCACACACCGGACCAGGCCAACTCTGACCGTGCCA...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCACCAGAGGGAGAATTCGGTaGCCTCAGATGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: STSPVLPCGARQATQGPTRGRIR*PQMEGW
Trigger: CCAGCCCTCCATCTGAGGCCACCGAATTCTCCCTCT...GGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAGGCCTCTGCGGGCTCTaGCCTGAGACAGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPGLCGL*PETAKA
Trigger: AGCCTTCGCTGTCTCAGGCCAGAGCCCGCAGAGGCC...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGCAAGACACTCCGGCTaGAGCTCTGGGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHARHSG*SSGQRQ
Trigger: CTGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGACCCTGCGTTTCTTCTaGGGTGCAGGGGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: WTSEGSEQQDTPAGALTATLRFF*GAGGAE
Trigger: CTCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGT...CGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR TCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAGCAGGTGCTGCAGCTTaGCCCTCGAGGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPAGAAA*PSRHRQ
Trigger: CTGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGC...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGATAGAGGGGCGAGTGTaGTGTTTCCGAAGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVIEGRV*CFRSVV
Trigger: GACCACACTTCGGAAACATCACACTCGCCCCTCTAT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCCAAGGAACAGGAGCTaGGGGACGGGCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHPRNRS*GTGSEL
Trigger: GAGTTCAGAGCCCGTCCCTCAGCTCCTGTTCCTTGG...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCACCTTGCTGACCTGTaGCCCTCATGCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHHLADL*PSCPLT
Trigger: GGTCAGAGGGCATGAGGGTCACAGGTCAGCAAGGTG...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGACACTCAGGAATGGCTaGTCCAGGTTTTCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PASLLPDSWRAELRADPVTLRNG*SRFSRW
Trigger: CCAGCGAGAAAACCTGGAGCAGCCATTCCTGAGTGT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTGTGATCTGGAAGGCGTaGTCTCGGGACCCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAVIWKA*SRDPSS
Trigger: GCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCAC...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCGGGTTAGACGGCGCTaGAAAGTCCAGGGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHRVRRR*KVQGSS
Trigger: CGAACTCCCCTGGACTTTGCAGCGCCGTCTAACCCG...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379409.6
CDS-3UTR GCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCAGGAAGGAGCGGATCTaGTTCTCCTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAARKERI*FSFSSR
Trigger: CCTGGAGGAGAAGGAGAAGCAGATCCGCTCCTTCCT...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCACCAGGAAGGAGCGGATCTaGTTCTCCTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: STSPVLPCGARQATQGPTRKERI*FSFSSR
Trigger: CCTGGAGGAGAAGGAGAAGCAGATCCGCTCCTTCCT...GGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACCCACTGCCCATAACCTaGGACCCTGGGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHPLPIT*DPGKLS
Trigger: CGAGAGCTTCCCAGGGTCGCAGGTTATGGGCAGTGG...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGTGGGTCAGGTCCAGGTaGAGTGGGGTGACAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEWVRSR*SGVTGP
Trigger: CGGCCCTGTCACCCCACTGCACCTGGACCTGACCCA...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCATCCAGGCTCAGCCTGTaGAGCTGGGTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPSRLSL*SWVRSR
Trigger: CCTGGACCTGACCCAGCTGCACAGGCTGAGCCTGGA...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAAGTGGAAGAGCTTGTTaGCGGCGGCGTCCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPSGRAC*RRRPRF
Trigger: GAAGCGGGGACGCCGCCGCCAACAAGCTCTTCCACT...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGAACACACTCAGGAATaGCTGCTCCAGGTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: DSWRAELRADPVDGQDLPEHTQE*LLQVFS
Trigger: CGAGAAAACCTGGAGCAGCCATTCCTGAGTGTGTTC...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCTTTCTCGTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCACAGTCGCTGACATCCTaGCTGTGCTGGAACCGCAGC +
Preference number: 4 (lower is better)
Translates to: SFSSGGVNVSRAALWCAPQSLTS*LCWNRS
Trigger: GCTGCGGTTCCAGCACAGCCAGGATGTCAGCGACTG...TGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGAGAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACCATAACCTGCGACCCTaGGAAGCTCTCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHHNLRP*EALGTR
Trigger: CCTGGTGCCGAGAGCTTCCCAGGGTCGCAGGTTATG...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGTGCAGCGGTGTGTGCTaGGAGGAGCAGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPECSGVC*EEQPTV
Trigger: CACCGTGGGCTGCTCCTCCCAGCACACACCGCTGCA...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379407.7
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGTGGGAGGTGGCGGGTaGTGTGTAGGGGTCGGCATA +
Preference number: 4 (lower is better)
Translates to: TWTSEGSEQQDTPAGALTVGGGG*CVGVGI
Trigger: TATGCCGACCCCTACACACCACCCGCCACCTCCCAC...GGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGTCTGTGACCCTGCGGTaGGAGGTGGCGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPESVTLR*EVAGGV
Trigger: CACACCACCCGCCACCTCCCACCGCAGGGTCACAGA...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCAGCTGGGGGCACTTCTaGTGGGAGGAAGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: GVNVSRAALWCAPGHTRTSWGHF*WEEDKV
Trigger: GACTTTGTCTTCCTCCCACCAGAAGTGCCCCCAGCT...GGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGTGACCCAGCCTCGCTaGCCAGGGCATCCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHVTQPR*PGHPLD
Trigger: ATCCAAAGGATGCCCTGGCCAGCGAGGCTGGGTCAC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACTGGCACGGTCAGAGTTaGCCTGGTCCGGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHWHGQS*PGPVCA
Trigger: AGCACACACCGGACCAGGCCAACTCTGACCGTGCCA...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCATCCGTCGGCCAATGCTaGCACGGTCAGAGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGPRRGLSSKTLRLELWASVGQC*HGQSWP
Trigger: AGGCCAACTCTGACCGTGCCAGCATTGGCCGACGGA...TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGGGTCCTCAAGACTGTaGGAGACCCTGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGPRRGLSSKTLRLELWAGSSRL*ETLAAE
Trigger: CTCAGCAGCCAGGGTCTCCCACAGTCTTGAGGACCC...TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAACCCTGCGTTTCTTCTaGGGTGCAGGGGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGPRRGLSSKTLRLELWATLRFF*GAGGAE
Trigger: CTCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGT...TGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACTCCGCCGCCCCTTCTTaGACACACTCAGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHSAAPS*THSGMA
Trigger: AGCCATTCCTGAGTGTGTTCAAGAAGGGGCGGCGGA...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAACAGCCCCTGAAATGTaGGTCCTTCCGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPTAPEM*VLPSRG
Trigger: CCCACGGCTCGGAAGGACTCACATTTCAGGGGCTGT...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTTCTCCTCCAGGTTaGTGTGGACGGCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPPSPPG*CGRHGV
Trigger: CACTCCGTGCCGTCCACATCAACCTGGAGGAGAAGG...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGCACTCTGCATGGCACTaGGGAACTCCTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEHSAWH*GTPPGP
Trigger: GGGGCCTGGAGGAGTTCCTCAGTGCCATGCAGAGTG...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACACCTTGCTGACCTGTaGCCCTCATGCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPHLADL*PSCPLT
Trigger: GGTCAGAGGGCATGAGGGTCACAGGTCAGCAAGGTG...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTGACATCCTGGCTGTaGTGGAACCGCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPLTSWL*WNRSWT
Trigger: GGTCCAGCTGCGGTTCCAGCACAGCCAGGATGTCAG...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGTGATCTGGAAGGCGTaGTCTCGGGACCCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEVIWKA*SRDPSS
Trigger: GCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCAC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGTCCTGTGCGGGCAGGTaGTGCAGCTTGACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPESCAGR*CSLTLE
Trigger: CTCGAGGGTCAAGCTGCAGCACCTGCCCGCACAGGA...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCACTGCCCATAACCTaGGACCCTGGGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPPLPIT*DPGKLS
Trigger: CGAGAGCTTCCCAGGGTCGCAGGTTATGGGCAGTGG...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TCTTTCTCGTCCGGTGGTGTCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGTCCACGTGCACTCTaGATGGCACTGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SFSSGGVNVSRAALWCAPGPRAL*MALRNS
Trigger: GGAGTTCCTCAGTGCCATGCAGAGTGCACGTGGACC...TGGCGCGCACCACAGGGCAGCACGGGAGACGTTGACACCACCGGACGAGAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp CCAAGGCCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCTCCAGGCTCAGCCTGTaGAGCTGGGTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRPITLDPQRTVAKASAGSRLSL*SWVRSR
Trigger: CCTGGACCTGACCCAGCTGCACAGGCTGAGCCTGGA...GCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTAGCCCTGGGTGCAGGTaGAGAGGGAGAATTCGGTGG +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGASPGCR*RGRIRW
Trigger: CCACCGAATTCTCCCTCTGCACCTGCACCCAGGGCT...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACAGTGGCTGTTCCCCATaGCCAGAGTCGTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHSGCSP*PESYRS
Trigger: CGACCTGTACGACTCTGGCCATGGGGAACAGCCACT...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCTCCAGGTTTTCTCGCTaGTTCTCCAGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: QVPWSLARVVLRTHLTAASRFSR*FSRSRM
Trigger: CATCCTGGACCTGGAGAACCAGCGAGAAAACCTGGA...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGTGGACGGCACGGAGTaGGAGCTCCCCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEVDGTE*ELPLEA
Trigger: TGCTTCAAGGGGGAGCTCCCACTCCGTGCCGTCCAC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACATAACCTGCGACCCTaGGAAGCTCTCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPHNLRP*EALGTR
Trigger: CCTGGTGCCGAGAGCTTCCCAGGGTCGCAGGTTATG...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGTGGGAGGTGGCGGGTaGTGTGTAGGGGTCGGCATA +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEVGGGG*CVGVGI
Trigger: TATGCCGACCCCTACACACCACCCGCCACCTCCCAC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAGCAGGGCTCCCTTCTTaGAGAGCAAGTAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPAGLPS*RASRGQ
Trigger: CTGGCCCCTACTTGCTCTCCAAGAAGGGAGCCCTGC...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCAGGGCTCCCTTCTTaGAGAGCAAGTAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TWTSEGSEQQDTPAGALTAGLPS*RASRGQ
Trigger: CTGGCCCCTACTTGCTCTCCAAGAAGGGAGCCCTGC...GGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGCGGTCAGAGTTGGCCTaGTCCGGTGTGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPERSELA*SGVCWE
Trigger: CTCCCAGCACACACCGGACCAGGCCAACTCTGACCG...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCATCCGTCGGCCAATGCTaGCACGGTCAGAGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPSVGQC*HGQSWP
Trigger: AGGCCAACTCTGACCGTGCCAGCATTGGCCGACGGA...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTACAGGTCGGCAAGTCTaGGTCCCTGTCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGATGRQV*VPVHSL
Trigger: GAGGCTGTGGACAGGGACCCAGACTTGCCGACCTGT...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGCCAGGTAGCAGTCGCTaGCATCCTGGCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEPGSSR*HPGCAG
Trigger: TCCAGCACAGCCAGGATGTCAGCGACTGCTACCTGG...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp AAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTTGGCGAGGGTGGTCCTaGGAACCCACCTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: KSNATAPCVSSGVQGELSWRGWS*EPTSPR
Trigger: CCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCA...ACTCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACAAGAGGAGTCAGAGATaGGGTGGGAAGGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHKRSQR*GGKVGE
Trigger: CTCACCGACCTTCCCACCTCATCTCTGACTCCTCTT...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAGGTCCAGGATGTCCGTaGCCGGGATGTAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPGPGCP*PGCSGR
Trigger: TCTTCCACTACATCCCGGGCACGGACATCCTGGACC...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAACACATACACACACGTaGTCCGCAGCCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPTHTHT*SAATGQ
Trigger: CTGCCCTGTGGCTGCGGAGCACGTGTGTGTATGTGT...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAAGTGGCTGTTCCCCATaGCCAGAGTCGTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPSGCSP*PESYRS
Trigger: CGACCTGTACGACTCTGGCCATGGGGAACAGCCACT...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAACATCCTGGCTGTGCTaGAACCGCAGCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPTSWLC*NRSWTL
Trigger: CAAGGTCCAGCTGCGGTTCCAGCACAGCCAGGATGT...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAGTCCTTCCGAGCCGTaGGCCTGGAAGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPESPSEP*AWKYRW
Trigger: CCACCTGTACTTCCAGGCCCACGGCTCGGAAGGACT...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCAAGGCCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCAGTGGGCCTGTGATCTaGAAGGCGTGCTCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: PRPITLDPQRTVAKASAGSGPVI*KACSRD
Trigger: GTCCCGAGAGCACGCCTTCCAGATCACAGGCCCACT...GCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGCATAACCTGCGACCCTaGGAAGCTCTCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEHNLRP*EALGTR
Trigger: CCTGGTGCCGAGAGCTTCCCAGGGTCGCAGGTTATG...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACGATGTTTCCGAAGTGTaGTCAGGGGCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHDVSEV*SGASGL
Trigger: CAGCCCAGATGCCCCTGACCACACTTCGGAAACATC...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGTCTCTGAGCGGCTCTaGACTGCAGGGCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEVSERL*TAGLPS
Trigger: AGAAGGGAGCCCTGCAGTCCAGAGCCGCTCAGAGAC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp ACCCTGCTGACCTTTCTCTGTCCTCCGACCTTCACGCCCGTGCTGCCCTCCCACTTCTTTCTCGTCCGGTaGTGTCAACGTCTCCCGTGC +
Preference number: 4 (lower is better)
Translates to: TLLTFLCPPTFTPVLPSHFFLVR*CQRLPC
Trigger: GCACGGGAGACGTTGACACCACCGGACGAGAAAGAA...GTGGGAGGGCAGCACGGGCGTGAAGGTCGGAGGACAGAGAAAGGTCAGCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTGACTGTGGGAGACCCTaGCTGCTGAGCAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGADCGRP*LLSREH
Trigger: GTGTTCTCTGCTCAGCAGCCAGGGTCTCCCACAGTC...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTATCCTCAAAGGACTGTaGCCAAGGCCTCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAILKGL*PRPLRA
Trigger: AGCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGAT...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGTCCGCCGCCCCTTCTTaGACACACTCAGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPESAAPS*THSGMA
Trigger: AGCCATTCCTGAGTGTGTTCAAGAAGGGGCGGCGGA...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGGCCCCGGACATCTGTaGCCCTGCGGTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGGPGHL*PCGGRW
Trigger: CCACCTCCCACCGCAGGGTCACAGATGTCCGGGGCC...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR TCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACCTGGCGGGCTGAGCTaGGGGCCGACCCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAPGGLS*GPTLWT
Trigger: CGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGCCTTGCTCCCGGGTaGCCGGCTGCTGCCACTGCG +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAGLAPG*PAAATA
Trigger: CGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCC...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGGTCCAGGATGTCCGTaGCCGGGATGTAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEGPGCP*PGCSGR
Trigger: TCTTCCACTACATCCCGGGCACGGACATCCTGGACC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAAGGAAGGAGCGGATCTaGTTCTCCTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPRKERI*FSFSSR
Trigger: CCTGGAGGAGAAGGAGAAGCAGATCCGCTCCTTCCT...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGGTCCACGTGCACTCTaGATGGCACTGAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEGPRAL*MALRNS
Trigger: GGAGTTCCTCAGTGCCATGCAGAGTGCACGTGGACC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACTCCAGGTTTTCTCGCTaGTTCTCCAGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHSRFSR*FSRSRM
Trigger: CATCCTGGACCTGGAGAACCAGCGAGAAAACCTGGA...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp AAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTGAGGGGTGCGGGCAGTaGGCCTGTGATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KSNATAPCVSSGVQGELSEGCGQ*ACDLEG
Trigger: GCCTTCCAGATCACAGGCCCACTGCCCGCACCCCTC...ACTCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAGATGTTTCCGAAGTGTaGTCAGGGGCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPDVSEV*SGASGL
Trigger: CAGCCCAGATGCCCCTGACCACACTTCGGAAACATC...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp AAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTGTGGGCTCGAGGGCGTaGGTCCACGTGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSNATAPCVSSGVQGELSVGSRA*VHVHSA
Trigger: TGCAGAGTGCACGTGGACCCACGCCCTCGAGCCCAC...ACTCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTAGCTGGGGGCACTTCTaGTGGGAGGAAGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGASWGHF*WEEDKV
Trigger: GACTTTGTCTTCCTCCCACCAGAAGTGCCCCCAGCT...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR TCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGCAGAGGAGACAAGCTaGGGGGCGTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGAEETS*GASGGC
Trigger: GCAGCCCCCAGACGCCCCTCAGCTTGTCTCCTCTGC...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR GCA 90 bp AAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTAGACAGCGAAGGCTCTaGCTGCCCCTCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: KSNATAPCVSSGVQGELSRQRRL*LPLPSA
Trigger: TGCACTGGGGAGGGGCAGGCAGAGCCTTCGCTGTCT...ACTCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGAGGCCCGGAGCCTCCTaGGGGCCTGAGGGACACAGT +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGRPGAS*GPEGHS
Trigger: ACTGTGTCCCTCAGGCCCCCAGGAGGCTCCGGGCCT...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCATCCAGGTTTTCTCGCTaGTTCTCCAGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPSRFSR*FSRSRM
Trigger: CATCCTGGACCTGGAGAACCAGCGAGAAAACCTGGA...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCAGCTCCTCGGAGAAAATaGCCAAGGACGTTGGGTACA +
Preference number: 4 (lower is better)
Translates to: WVRGAGTLELGEGGPENPAPRRK*PRTLGT
Trigger: TGTACCCAACGTCCTTGGCCATTTTCTCCGAGGAGC...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGGGCCCCCTCCCTGTaGGTGACAGCGCGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAGAPSL*VTARRH
Trigger: GTGCCTTCGCGCTGTCACCCACAGGGAGGGGGCCCC...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACCCCCTCCCTGTGGGTaGCAGCGCGAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAPPPCG*QREGTA
Trigger: TGCTGTGCCTTCGCGCTGTCACCCACAGGGAGGGGG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTCCCCCTCCCTGTGGGTaGCAGCGCGAAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGPPPCG*QREGTA
Trigger: TGCTGTGCCTTCGCGCTGTCACCCACAGGGAGGGGG...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGGGCCTTGCTCCCGGGTaGCCGGCTGCTGCCACTGCG +
Preference number: 4 (lower is better)
Translates to: VVVYLKSNATAPCVSSGVGLAPG*PAAATA
Trigger: CGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCC...CACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTCGACCTTCACGCCCGTaGTGCCCTCCCACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGRPSRP*CPPTPS
Trigger: GCTGGGAGTGGGAGGGCAGCACGGGCGTGAAGGTCG...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACGACCTTCACGCCCGTaGTGCCCTCCCACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGARPSRP*CPPTPS
Trigger: GCTGGGAGTGGGAGGGCAGCACGGGCGTGAAGGTCG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGCTCCTCGGAGAAAATaGCCAAGGACGTTGGGTACA +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEAPRRK*PRTLGT
Trigger: TGTACCCAACGTCCTTGGCCATTTTCTCCGAGGAGC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGCTCCTGTGGGGCAGCTaGGGACCCACAGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGLLWGS*GPTAKR
Trigger: CCTCTTGGCTGTGGGTCCCCAGCTGCCCCACAGGAG...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGACAGGTGGGCTGGGCTaGCAAGGGCTCCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGTGGLG*QGLQGP
Trigger: TGGGCCTTGGAGCCCTTGCCAGCCCAGCCCACCTGT...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTAGCCTCCTGGGGGCCTaGGGGACACAGTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGSLLGA*GTQWLF
Trigger: GAACAGCCACTGTGTCCCTCAGGCCCCCAGGAGGCT...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTCTGAGGGACGGGCTCTaGACTCAGGGCCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGLRDGL*TQGPRD
Trigger: GTCTCTGGGGCCCTGAGTTCAGAGCCCGTCCCTCAG...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAAAGAGCCGGTCCCACTaGTCCTGTGCGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAKSRSH*SCAGRC
Trigger: GCACCTGCCCGCACAGGAGCAGTGGGACCGGCTCTT...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGGGCGTGGGTCCACGTaGACTCTGCATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGGRGST*TLHGTE
Trigger: CTCAGTGCCATGCAGAGTGCACGTGGACCCACGCCC...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR GCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAACCGGCTGCTGCCACTaGGTCTCAGCTCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGATGCCH*VSARSS
Trigger: GGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGT...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp TGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTCACCGCGTTATCTGAAATCAAATaGAACCGCACCCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: WTSEGSEQQDTPAGALTALSEIK*NRTLRF
Trigger: GAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAA...CGCGGTGAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR CCA 90 bp TTGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGGAACACACTCAGGAATaGCTGCTCCAGGTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LKWVRGAGTLELGEGGPEEHTQE*LLQVFS
Trigger: CGAGAAAACCTGGAGCAGCCATTCCTGAGTGTGTTC...CTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGTGGACGGCACGGAGTaGGAGCTCCCCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGVDGTE*ELPLEA
Trigger: TGCTTCAAGGGGGAGCTCCCACTCCGTGCCGTCCAC...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTTCTGTGACCCTGCGGTaGGAGGTGGCGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGSVTLR*EVAGGV
Trigger: CACACCACCCGCCACCTCCCACCGCAGGGTCACAGA...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTTGGTCCGGTGTGTGCTaGGAGGAGCAGCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGWSGVC*EEQPTV
Trigger: CACCGTGGGCTGCTCCTCCCAGCACACACCGGACCA...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGTGCCTGGCTGGGTGCTaGGTGGGGGTCCTCAAGACT +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGCLAGC*VGVLKT
Trigger: AGTCTTGAGGACCCCCACCCAGCACCCAGCCAGGCA...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGGCAGAGGAGACAAGCTaGGGGGCGTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VVVYLKSNATAPCVSSGVAEETS*GASGGC
Trigger: GCAGCCCCCAGACGCCCCTCAGCTTGTCTCCTCTGC...CACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR TCA 90 bp GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGAGGTGGGAAGGTCGGTaGGGGGCCCGAGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: VVVYLKSNATAPCVSSGVRWEGR*GARGGR
Trigger: TCTGCCACCTCGGGCCCCTCACCGACCTTCCCACCT...CACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGCTGACATCCTGGCTGTaGTGGAACCGCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGLTSWL*WNRSWT
Trigger: GGTCCAGCTGCGGTTCCAGCACAGCCAGGATGTCAG...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGCCACTGCCCATAACCTaGGACCCTGGGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGPLPIT*DPGKLS
Trigger: CGAGAGCTTCCCAGGGTCGCAGGTTATGGGCAGTGG...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp TCAACGTCTCCCGTGCTGCCCTGTGGTGCGCGCCAGGCCACACAAGGACCCACCCAGAGAACACATGGATaGAGCACCAATAAAATTCTA +
Preference number: 4 (lower is better)
Translates to: STSPVLPCGARQATQGPTQRTHG*STNKIL
Trigger: TAGAATTTTATTGGTGCTGCATCCATGTGTTCTCTG...GGTGGGTCCTTGTGTGGCCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCATCAGCGAGGGCTTTCTaGAGAAGGAGGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGASARAF*RRRPGA
Trigger: GGCTCCGGGCCTCCTTCTCCAGAAAGCCCTCGCTGA...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTAGTGGAAGAGCTTGTTaGCGGCGGCGTCCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGSGRAC*RRRPRF
Trigger: GAAGCGGGGACGCCGCCGCCAACAAGCTCTTCCACT...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTGTGGACGGCACGGAGTaGGAGCTCCCCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGVDGTE*ELPLEA
Trigger: TGCTTCAAGGGGGAGCTCCCACTCCGTGCCGTCCAC...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTCGTAGTCCTCGTAGCTaGCGCACACCACGCGGATGG +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGRSPRS*RTPRGW
Trigger: CCATCCGCGTGGTGTGCGCCAGCTACGAGGACTACG...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGTGGTCAGGGGCATCTaGGCTGCTCTCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAVVRGI*AALQAQ
Trigger: CTGAGCCTGGAGAGCAGCCCAGATGCCCCTGACCAC...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGTCTCTGAGCGGCTCTaGACTGCAGGGCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGVSERL*TAGLPS
Trigger: AGAAGGGAGCCCTGCAGTCCAGAGCCGCTCAGAGAC...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR CCA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTACTTGTAATTTGAAGTaGGTTAGAGGGGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGATCNLK*VRGAGT
Trigger: GGTACCTGCCCCTCTAACCCACTTCAAATTACAAGT...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACCAGGTAGCAGTCGCTaGCATCCTGGCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAPGSSR*HPGCAG
Trigger: TCCAGCACAGCCAGGATGTCAGCGACTGCTACCTGG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTACAGCCCCTGAAATGTaGGTCCTTCCGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGTAPEM*VLPSRG
Trigger: CCCACGGCTCGGAAGGACTCACATTTCAGGGGCTGT...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACCTTCTCCTCCAGGTTaGTGTGGACGGCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAPSPPG*CGRHGV
Trigger: CACTCCGTGCCGTCCACATCAACCTGGAGGAGAAGG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR TCA 90 bp AAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGAGCTGAGTATAGAGGGGCGAGTGTaGTGTTTCCGAAGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: KSNATAPCVSSGVQGELSIEGRV*CFRSVV
Trigger: GACCACACTTCGGAAACATCACACTCGCCCCTCTAT...ACTCAGCTCCCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR TCA 90 bp CCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGAGGCAAAGTTGTTGTTTATCTaGAATCAAATGCAACCGCAC +
Preference number: 4 (lower is better)
Translates to: PRRGLSSKTLRLELWAEAKLLFI*NQMQPH
Trigger: GTGCGGTTGCATTTGATTTCAGATAAACAACAACTT...TGCCTCTGCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACTTCCCTGCCCCAGCTaGTGGCACCAAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGALPCPS*WHQGTG
Trigger: TCCTGTTCCTTGGTGCCAGCAGCTGGGGCAGGGAAG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTCAACGTCTCCCGTGCTaGCCTGTGGTGCGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGQRLPC*PVVRAR
Trigger: CCTGGCGCGCACCACAGGGCAGCACGGGAGACGTTG...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTCAGTCGCTGACATCCTaGCTGTGCTGGAACCGCAGC +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGQSLTS*LCWNRS
Trigger: GCTGCGGTTCCAGCACAGCCAGGATGTCAGCGACTG...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGCCTGGAAGTACAGGTaGGCGGGGAATAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAAWKYR*AGNSSR
Trigger: CCTGGAGCTATTCCCCGCCCACCTGTACTTCCAGGC...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTAGTCCTTCCGAGCCGTaGGCCTGGAAGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGSPSEP*AWKYRW
Trigger: CCACCTGTACTTCCAGGCCCACGGCTCGGAAGGACT...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCATCCTCCAGGTTGATGTaGACGGCACGGAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGASSRLM*TARSGS
Trigger: GCTCCCACTCCGTGCCGTCCACATCAACCTGGAGGA...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTGCAGGGCTCCCTTCTTaGAGAGCAAGTAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGAGLPS*RASRGQ
Trigger: CTGGCCCCTACTTGCTCTCCAAGAAGGGAGCCCTGC...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTGTCTCTGAGCGGCTCTaGACTGCAGGGCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGVSERL*TAGLPS
Trigger: AGAAGGGAGCCCTGCAGTCCAGAGCCGCTCAGAGAC...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTGTGACCCAGCCTCGCTaGCCAGGGCATCCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGVTQPR*PGHPLD
Trigger: ATCCAAAGGATGCCCTGGCCAGCGAGGCTGGGTCAC...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGCCTCAAAGAGGGGATaGGCAGCCTCCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAASKRG*AASSQV
Trigger: CACCTGTGAGGAGGCTGCCCATCCCCTCTTTGAGGC...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGAGAGGACACAGGGTaGCCTCAAAGAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAGEDTG*PQRGDG
Trigger: CCCATCCCCTCTTTGAGGCCACCCTGTGTCCTCTCC...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
3UTR CAA 72 bp CCCCCATCACACTGGGTTCAGACCCTGACTTGTAATTaGAAGTGGGTTAGAGGGGCAGGTACCCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPSHWVQTLTCN*KWVRGAGTLEL
Trigger: AAGCTCCAGGGTACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR GCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGAGCACCAGGAGGGGTaGGGGCAGTGGGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGEHQEG*GQWACD
Trigger: ATCACAGGCCCACTGCCCGCACCCCTCCTGGTGCTC...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTAAGAGCCGGTCCCACTaGTCCTGTGCGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGKSRSH*SCAGRC
Trigger: GCACCTGCCCGCACAGGAGCAGTGGGACCGGCTCTT...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTACCGGCTGCTGCCACTaGGTCTCAGCTCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGTGCCH*VSARSS
Trigger: GGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGT...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp CCAAGGCCCATCACTCTTGATCCTCAAAGGACTGTGGCCAAGGCCTCTGCGGGCTTATCTGAAATCAAATaGAACCGCACCCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: PRPITLDPQRTVAKASAGLSEIK*NRTLRF
Trigger: GAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAA...GCCCGCAGAGGCCTTGGCCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAGGGGGATGTTTCCGAAGTGTaGTCAGGGGCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VYLKSNATAPCVSSGVQGDVSEV*SGASGL
Trigger: CAGCCCAGATGCCCCTGACCACACTTCGGAAACATC...CCCCTGCACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR CCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTTCTGTGACCCTGCGGTaGGAGGTGGCGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGSVTLR*EVAGGV
Trigger: CACACCACCCGCCACCTCCCACCGCAGGGTCACAGA...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS-3UTR TCA 90 bp GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCTCCTCACACCTTGCTaGCCTGTGACCCTCATGCCC +
Preference number: 4 (lower is better)
Translates to: VVVYLKSNATAPCVSSGVLLTPC*PVTLMP
Trigger: GGGCATGAGGGTCACAGGTCAGCAAGGTGTGAGGAG...CACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGTCCCACTGCTCCTGTaGGGGCAGGTGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGVPLLL*GQVLQL
Trigger: AAGCTGCAGCACCTGCCCGCACAGGAGCAGTGGGAC...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR GCA 90 bp GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGTCCTCCGTCGGCCAATaGTGGCACGGTCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VVVYLKSNATAPCVSSGVSSVGQ*WHGQSW
Trigger: CCAACTCTGACCGTGCCAGCATTGGCCGACGGAGGA...CACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTAGCTGGGGGCACTTCTaGTGGGAGGAAGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGSWGHF*WEEDKV
Trigger: GACTTTGTCTTCCTCCCACCAGAAGTGCCCCCAGCT...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTCGGTCAGAGTTGGCCTaGTCCGGTGTGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGRSELA*SGVCWE
Trigger: CTCCCAGCACACACCGGACCAGGCCAACTCTGACCG...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCAAGACACTCCGGCTaGAGCTCTCACCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGARHSG*SSHRGH
Trigger: ATGGCCGCGGTGAGAGCTCCAGCCGGAGTGTCTTGC...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491024.1
CDS-3UTR TCA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTATAGAGGGGCGAGTGTaGTGTTTCCGAAGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGIEGRV*CFRSVV
Trigger: GACCACACTTCGGAAACATCACACTCGCCCCTCTAT...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CCA 90 bp GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGACATCCTGGCTGTGCTaGAACCGCAGCTGGACCTTG +
Preference number: 4 (lower is better)
Translates to: VVVYLKSNATAPCVSSGVTSWLC*NRSWTL
Trigger: CAAGGTCCAGCTGCGGTTCCAGCACAGCCAGGATGT...CACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTCTCAGCCTGTGCAGCTaGGTCAGGTCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGLSLCS*VRSRCS
Trigger: ACTGCACCTGGACCTGACCCAGCTGCACAGGCTGAG...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR TCA 90 bp AGTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTAAGTTGTTGTTTATCTaGAATCAAATGCAACCGCAC +
Preference number: 4 (lower is better)
Translates to: SCCLSEIKCNRTLRFFWGKLLFI*NQMQPH
Trigger: GTGCGGTTGCATTTGATTTCAGATAAACAACAACTT...ACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379410.8
ENST00000491024.1
CDS GCA 90 bp GGCCGCGGCCCTCTGCCCGGGCCTTGCTCCCGGGTGACCGGCTGCTaGCACTGCGTCTCAGCTCGGTCCTCCGTCGGCCAATGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GRGPLPGPCSRVTGC*HCVSARSSVGQCWH
Trigger: GTGCCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGGCCGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS GCA 90 bp CAGGGCCGCGGCCCTCTGCCCGGGCCTTGCTCCCGGGTGACCGGCTaGTGCCACTGCGTCTCAGCTCGGTCCTCCGTCGGCCAATGCTGG +
Preference number: 5 (lower is better)
Translates to: QGRGPLPGPCSRVTG*CHCVSARSSVGQCW
Trigger: CCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGGCCGCGGCCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS TCA 90 bp CCAGGCTCAGCCTGTGCAGCTGGGTCAGGTCCAGGTGCAGTGGGGTaGCAGGGCCGCGGCCCTCTGCCCGGGCCTTGCTCCCGGGTGACC +
Preference number: 5 (lower is better)
Translates to: PGSACAAGSGPGAVG*QGRGPLPGPCSRVT
Trigger: GGTCACCCGGGAGCAAGGCCCGGGCAGAGGGCCGCGGCCCTGTCACCCCACTGCACCTGGACCTGACCCAGCTGCACAGGCTGAGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS GCA 90 bp GGCCCTCTGCCCGGGCCTTGCTCCCGGGTGACCGGCTGCTGCCACTaGGTCTCAGCTCGGTCCTCCGTCGGCCAATGCTGGCACGGTCAG +
Preference number: 5 (lower is better)
Translates to: GPLPGPCSRVTGCCH*VSARSSVGQCWHGQ
Trigger: CTGACCGTGCCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS CCA 90 bp CCAGGTCCAGGATGTCCGTGCCCGGGATGTAGTGGAAGAGCTTGTTaGCGGCGGCGTCCCCGCTTCGAGCAGCCTCGGGGCCCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PGPGCPCPGCSGRAC*RRRPRFEQPRGPAG
Trigger: GCCTGCCGGGCCCCGAGGCTGCTCGAAGCGGGGACGCCGCCGCCAACAAGCTCTTCCACTACATCCCGGGCACGGACATCCTGGACCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS TCA 90 bp GGAAGCTCTCGGCACCAGGCAGCGGCGGGGCCCCCTCCCTGTGGGTaGCAGCGCGAAGGCACAGCAGCCAGTGACCGTAGTCCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: GSSRHQAAAGPPPCG*QREGTAASDRSPRS
Trigger: GCTACGAGGACTACGGTCACTGGCTGCTGTGCCTTCGCGCTGTCACCCACAGGGAGGGGGCCCCGCCGCTGCCTGGTGCCGAGAGCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS GCA 90 bp TGCAGCTTGACCCTCGAGGCACAGACAGCACTGCCGCCGGGTTCGTaGCCTGACGCCGTCCGCAGCCGGGTTAGACGGCGCTGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: CSLTLEAQTALPPGS*PDAVRSRVRRRCGG
Trigger: ACCCCCACAGCGCCGTCTAACCCGGCTGCGGACGGCGTCAGGGCACGAACCCGGCGGCAGTGCTGTCTGTGCCTCGAGGGTCAAGCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CAA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCTGGCACGGTCAGAGTaGGCCTGGTCCGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: WRAELRADPVDGQDLPDLLARSE*AWSGVC
Trigger: GCACACACCGGACCAGGCCAACTCTGACCGTGCCAG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGGCAGGTGCTGCAGCTaGACCCTCGAGGCACAGACA +
Preference number: 5 (lower is better)
Translates to: DSWRAELRADPVDGQDLPGRCCS*TLEAQT
Trigger: TGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGCC...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACGCTGGGCTCCTGGGGTaGTCCCGGGGGCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHAGLLG*SRGLLW
Trigger: CCACAGGAGCCCCCGGGACAACCCCAGGAGCCCAGC...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS GCA 90 bp TGCAGCTTGACCCTCGAGGCACAGACAGCACTGCCGCCGGGTTCGTaGCCTGACGCCGTCCGCAGCCGGGTTAGACGGCGCTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: CSLTLEAQTALPPGS*PDAVRSRVRRRCKV
Trigger: GACTTTGCAGCGCCGTCTAACCCGGCTGCGGACGGCGTCAGGGCACGAACCCGGCGGCAGTGCTGTCTGTGCCTCGAGGGTCAAGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000480267.1
CDS GCA 90 bp ACCGGCTGCTGCCACTGCGTCTCAGCTCGGTCCTCCGTCGGCCAATaGTGGCACGGTCAGAGTTGGCCTGGTCCGGTGTGTGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: TGCCHCVSARSSVGQ*WHGQSWPGPVCAGR
Trigger: CCTCCCAGCACACACCGGACCAGGCCAACTCTGACCGTGCCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS CCA 90 bp CACACACGTGCTCCGCAGCCACAGGGCAGGCCCCTCTCCAAGTCCTaGGTCAGGAGTGCCTCTGGGGGCCCGGGAAGCATCCCAAACACC +
Preference number: 5 (lower is better)
Translates to: HTRAPQPQGRPLSKS*VRSASGGPGSIPNT
Trigger: GGTGTTTGGGATGCTTCCCGGGCCCCCAGAGGCACTCCTGACCCAGGACTTGGAGAGGGGCCTGCCCTGTGGCTGCGGAGCACGTGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS CCA 90 bp GGCTGCTGCCACTGCGTCTCAGCTCGGTCCTCCGTCGGCCAATGCTaGCACGGTCAGAGTTGGCCTGGTCCGGTGTGTGCTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GCCHCVSARSSVGQC*HGQSWPGPVCAGRS
Trigger: GCTCCTCCCAGCACACACCGGACCAGGCCAACTCTGACCGTGCCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGCTCCGCCGCCCCTTCTaGAACACACTCAGGAATGGC +
Preference number: 5 (lower is better)
Translates to: WRAELRADPVDGQDLPDLLRRPF*NTLRNG
Trigger: GCCATTCCTGAGTGTGTTCAAGAAGGGGCGGCGGAG...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGGCAGGTGCTGCAGCTaGACCCTCGAGGCACAGACA +
Preference number: 5 (lower is better)
Translates to: PASLLPDSWRAELRADPVGRCCS*TLEAQT
Trigger: TGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGCC...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS TCA 90 bp GGTCAGGAGTGCCTCTGGGGGCCCGGGAAGCATCCCAAACACCTGTaGTCTGGAAGGCGTGCTCTCGGGACCCCTCGAGCGGGCAGACAC +
Preference number: 5 (lower is better)
Translates to: GQECLWGPGKHPKHL*SGRRALGTPRAGRH
Trigger: GTGTCTGCCCGCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCACAGGTGTTTGGGATGCTTCCCGGGCCCCCAGAGGCACTCCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS GCA 90 bp AGACACAGGCACCGAGGGGAGTGGGCTCGAGGGCGTGGGTCCACGTaGACTCTGCATGGCACTGAGGAACTCCTCCAGGCCCCGGACATC +
Preference number: 5 (lower is better)
Translates to: RHRHRGEWARGRGST*TLHGTEELLQAPDI
Trigger: GATGTCCGGGGCCTGGAGGAGTTCCTCAGTGCCATGCAGAGTGCACGTGGACCCACGCCCTCGAGCCCACTCCCCTCGGTGCCTGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000491024.1
CDS GCA 90 bp CTGGGGGCCCGGGAAGCATCCCAAACACCTGTGATCTGGAAGGCGTaGTCTCGGGACCCCTCGAGCGGGCAGACACTCAGCTCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: LGAREASQTPVIWKA*SRDPSSGQTLSSVS
Trigger: GCTGACGGAGCTGAGTGTCTGCCCGCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCACAGGTGTTTGGGATGCTTCCCGGGCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS CCA 90 bp GGAGTGCCTCTGGGGGCCCGGGAAGCATCCCAAACACCTGTGATCTaGAAGGCGTGCTCTCGGGACCCCTCGAGCGGGCAGACACTCAGC +
Preference number: 5 (lower is better)
Translates to: GVPLGAREASQTPVI*KACSRDPSSGQTLS
Trigger: GCTGAGTGTCTGCCCGCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCACAGGTGTTTGGGATGCTTCCCGGGCCCCCAGAGGCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS-3UTR CAA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGACCACGCGGATGGTGTaGATGAGGGGGCCTTCAATC +
Preference number: 5 (lower is better)
Translates to: WRAELRADPVDGQDLPDLTTRMV*MRGPSI
Trigger: GATTGAAGGCCCCCTCATCAACACCATCCGCGTGGT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS CCA 90 bp TTCCCTTCAGCGAGGGCTTTCTGGAGAAGGAGGCCCGGAGCCTCCTaGGGGCCTGAGGGACACAGTGGCTGTTCCCCATGGCCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: FPSARAFWRRRPGAS*GPEGHSGCSPWPES
Trigger: CGACTCTGGCCATGGGGAACAGCCACTGTGTCCCTCAGGCCCCCAGGAGGCTCCGGGCCTCCTTCTCCAGAAAGCCCTCGCTGAAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp TGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTGACCTGAAATGGCCAAGGACGTaGGGTACAGGACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: WRAELRADPVDGQDLPDLKWPRT*GTGPRA
Trigger: GGCTCTTGGTCCTGTACCCAACGTCCTTGGCCATTT...CAGGTCAGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS GCA 90 bp GGGGCGAGTGTGATGTTTCCGAAGTGTGGTCAGGGGCATCTGGGCTaGTCTCCAGGCTCAGCCTGTGCAGCGGTGTGTGCTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GASVMFPKCGQGHLG*SPGSACAAVCAGRS
Trigger: GCTCCTCCCAGCACACACCGCTGCACAGGCTGAGCCTGGAGAGCAGCCCAGATGCCCCTGACCACACTTCGGAAACATCACACTCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379407.7
CDS CCA 90 bp ACATCCGCGCGCTGTCCTCTCTGTTTCCCTTCAGCGAGGGCTTTCTaGAGAAGGAGGCCCGGAGCCTCCTGGGGGCCTGAGGGACACAGT +
Preference number: 5 (lower is better)
Translates to: TSARCPLCFPSARAF*RRRPGASWGPEGHS
Trigger: ACTGTGTCCCTCAGGCCCCCAGGAGGCTCCGGGCCTCCTTCTCCAGAAAGCCCTCGCTGAAGGGAAACAGAGAGGACAGCGCGCGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CCAGCGAGTCTCCTCCCTGACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGAAATGGCCAAGGACGTaGGGTACAGGACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: PASLLPDSWRAELRADPVKWPRT*GTGPRA
Trigger: GGCTCTTGGTCCTGTACCCAACGTCCTTGGCCATTT...CACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTCAGGGAGGAGACTCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp ACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCTGGGCAGTGGGAGCTCCCCCTaGAAGCAAAGCCCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TWTSEGSEQQDTPAGALGSGSSP*KQSPSS
Trigger: GCTGGACGGGCTTTGCTTCAAGGGGGAGCTCCCACT...GCCCAGAGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS GCA 90 bp GGGGCGAGTGTGATGTTTCCGAAGTGTGGTCAGGGGCATCTGGGCTaGTCTCCAGGCTCAGCCTGTGCAGCTGGGTCAGGTCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: GASVMFPKCGQGHLG*SPGSACAAGSGPGA
Trigger: TGCACCTGGACCTGACCCAGCTGCACAGGCTGAGCCTGGAGAGCAGCCCAGATGCCCCTGACCACACTTCGGAAACATCACACTCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCTGTGCTCCTCACACCTaGCTGACCTGTGACCCTCAT +
Preference number: 5 (lower is better)
Translates to: QVPWSLARVVLRTHLTAACAPHT*LTCDPH
Trigger: ATGAGGGTCACAGGTCAGCAAGGTGTGAGGAGCACA...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACACCACGCGGATGGTGTaGATGAGGGGGCCTTCAATC +
Preference number: 5 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHTTRMV*MRGPSI
Trigger: GATTGAAGGCCCCCTCATCAACACCATCCGCGTGGT...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp GACTCCTGGCGGGCTGAGCTGAGGGCCGACCCTGTGGACGGCCAGGACCTCCCTACCCTGACTTGTAATTaGAAGTGGGTTAGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: DSWRAELRADPVDGQDLPTLTCN*KWVRGA
Trigger: TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGT...AGGGAGGTCCTGGCCGTCCACAGGGTCGGCCCTCAGCTCAGCCCGCCAGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp GGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACAAATGGCCAAGGACGTaGGGTACAGGACCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: GLEGQVPWSLARVVLRTHKWPRT*GTGPRA
Trigger: GGCTCTTGGTCCTGTACCCAACGTCCTTGGCCATTT...GTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACCCTCTGCCCGGGCCTaGCTCCCGGGTGACCGGCTG +
Preference number: 5 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGAPSARA*LPGDRL
Trigger: CAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS GCA 90 bp ACAGGCACCCTCCGCCGCCCCTTCTTGAACACACTCAGGAATGGCTaGTCCAGGTTTTCTCGCTGGTTCTCCAGGTCCAGGATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: TGTLRRPFLNTLRNG*SRFSRWFSRSRMSV
Trigger: CACGGACATCCTGGACCTGGAGAACCAGCGAGAAAACCTGGAGCAGCCATTCCTGAGTGTGTTCAAGAAGGGGCGGCGGAGGGTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS CCA 90 bp CCTCACAGGCACCCTCCGCCGCCCCTTCTTGAACACACTCAGGAATaGCTGCTCCAGGTTTTCTCGCTGGTTCTCCAGGTCCAGGATGTC +
Preference number: 5 (lower is better)
Translates to: PHRHPPPPLLEHTQE*LLQVFSLVLQVQDV
Trigger: GACATCCTGGACCTGGAGAACCAGCGAGAAAACCTGGAGCAGCCATTCCTGAGTGTGTTCAAGAAGGGGCGGCGGAGGGTGCCTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS CCA 90 bp ATCAGGAAGGAGCGGATCTGCTTCTCCTTCTCCTCCAGGTTGATGTaGACGGCACGGAGTGGGAGCTCCCCCTTGAAGCAAAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: IRKERICFSFSSRLM*TARSGSSPLKQSPS
Trigger: GGACGGGCTTTGCTTCAAGGGGGAGCTCCCACTCCGTGCCGTCCACATCAACCTGGAGGAGAAGGAGAAGCAGATCCGCTCCTTCCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCACCTCACCGCGGCCACCCTGACTTGTAATTaGAAGTGGGTTAGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: QVPWSLARVVLRTHLTAATLTCN*KWVRGA
Trigger: TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGT...GGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp TGGGTTAGAGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTGAGAACCCATGTGCTCCTCACACCTaGCTGACCTGTGACCCTCAT +
Preference number: 5 (lower is better)
Translates to: WVRGAGTLELGEGGPENPCAPHT*LTCDPH
Trigger: ATGAGGGTCACAGGTCAGCAAGGTGTGAGGAGCACA...TGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCTCTAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS GCA 90 bp CGGATGGTGTTGATGAGGGGGCCTTCAATCAGGAAGGAGCGGATCTaGTTCTCCTTCTCCTCCAGGTTGATGTGGACGGCACGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RMVLMRGPSIRKERI*FSFSSRLMWTARSG
Trigger: CCCACTCCGTGCCGTCCACATCAACCTGGAGGAGAAGGAGAAGCAGATCCGCTCCTTCCTGATTGAAGGCCCCCTCATCAACACCATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp GTTGTTGTTTATCTGAAATCAAATGCAACCGCACCCTGCGTTTCTTCTGGGGTGCCCTCTGCCCGGGCCTaGCTCCCGGGTGACCGGCTG +
Preference number: 5 (lower is better)
Translates to: VVVYLKSNATAPCVSSGVPSARA*LPGDRL
Trigger: CAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGG...CACCCCAGAAGAAACGCAGGGTGCGGTTGCATTTGATTTCAGATAAACAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CAA 90 bp GACAGGACTTGGACCTCGGAGGGGTCTGAGCAGCAAGACACTCCGGCTGGAGCTCAAGGCCCATCACTCTaGATCCTCAAAGGACTGTGG +
Preference number: 5 (lower is better)
Translates to: DRTWTSEGSEQQDTPAGAQGPSL*ILKGLW
Trigger: CCACAGTCCTTTGAGGATCAAGAGTGATGGGCCTTG...AGCTCCAGCCGGAGTGTCTTGCTGCTCAGACCCCTCCGAGGTCCAAGTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379410.8
CDS-3UTR CAA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTCTGGCACGGTCAGAGTaGGCCTGGTCCGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGLARSE*AWSGVC
Trigger: GCACACACCGGACCAGGCCAACTCTGACCGTGCCAG...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp TCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAGGTGGCAGGTGCTGCAGCTaGACCCTCGAGGCACAGACA +
Preference number: 5 (lower is better)
Translates to: SHWVQTLTCNLKWVRGAGGRCCS*TLEAQT
Trigger: TGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGCC...ACCTGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAAGTGGGAGCTCCCCCTaGAAGCAAAGCCCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGASGSSP*KQSPSS
Trigger: GCTGGACGGGCTTTGCTTCAAGGGGGAGCTCCCACT...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCACTCCGCCGCCCCTTCTaGAACACACTCAGGAATGGC +
Preference number: 5 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGALRRPF*NTLRNG
Trigger: GCCATTCCTGAGTGTGTTCAAGAAGGGGCGGCGGAG...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS-3UTR CAA 90 bp CCATCACACTGGGTTCAGACCCTGACTTGTAATTTGAAGTGGGTTAGAGGGGCAACCACGCGGATGGTGTaGATGAGGGGGCCTTCAATC +
Preference number: 5 (lower is better)
Translates to: PSHWVQTLTCNLKWVRGATTRMV*MRGPSI
Trigger: GATTGAAGGCCCCCTCATCAACACCATCCGCGTGGT...TGCCCCTCTAACCCACTTCAAATTACAAGTCAGGGTCTGAACCCAGTGTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS GCA 72 bp GGCCCTCTGCCCGGGCCTTGCTCCCGGGTGACCGGCTaGTGCCACTGCGTCTCAGCTCGGTCCTCCGTCGGC +
Preference number: 6 (lower is better)
Translates to: GPLPGPCSRVTG*CHCVSARSSVG
Trigger: GCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS CAA 72 bp AGTGGGGTGACAGGGCCGCGGCCCTCTGCCCGGGCCTaGCTCCCGGGTGACCGGCTGCTGCCACTGCGTCTC +
Preference number: 6 (lower is better)
Translates to: SGVTGPRPSARA*LPGDRLLPLRL
Trigger: GAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGGCCGCGGCCCTGTCACCCCACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS CAA 90 bp TCCAGGTGCAGTGGGGTGACAGGGCCGCGGCCCTCTGCCCGGGCCTaGCTCCCGGGTGACCGGCTGCTGCCACTGCGTCTCAGCTCGGTC +
Preference number: 6 (lower is better)
Translates to: SRCSGVTGPRPSARA*LPGDRLLPLRLSSV
Trigger: GACCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGGGCCGCGGCCCTGTCACCCCACTGCACCTGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS TCA 72 bp CGGCACCAGGCAGCGGCGGGGCCCCCTCCCTGTGGGTaGCAGCGCGAAGGCACAGCAGCCAGTGACCGTAGT +
Preference number: 6 (lower is better)
Translates to: RHQAAAGPPPCG*QREGTAASDRS
Trigger: ACTACGGTCACTGGCTGCTGTGCCTTCGCGCTGTCACCCACAGGGAGGGGGCCCCGCCGCTGCCTGGTGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS GCA 72 bp ACCCTCGAGGCACAGACAGCACTGCCGCCGGGTTCGTaGCCTGACGCCGTCCGCAGCCGGGTTAGACGGCGC +
Preference number: 6 (lower is better)
Translates to: TLEAQTALPPGS*PDAVRSRVRRR
Trigger: GCGCCGTCTAACCCGGCTGCGGACGGCGTCAGGGCACGAACCCGGCGGCAGTGCTGTCTGTGCCTCGAGGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000480267.1
CDS GCA 72 bp CCCGGGCCTTGCTCCCGGGTGACCGGCTGCTGCCACTaGGTCTCAGCTCGGTCCTCCGTCGGCCAATGCTGG +
Preference number: 6 (lower is better)
Translates to: PGPCSRVTGCCH*VSARSSVGQCW
Trigger: CCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS GCA 72 bp CCTCTGCCCGGGCCTTGCTCCCGGGTGACCGGCTGCTaGCACTGCGTCTCAGCTCGGTCCTCCGTCGGCCAA +
Preference number: 6 (lower is better)
Translates to: PLPGPCSRVTGC*HCVSARSSVGQ
Trigger: TTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCAGCAGCCGGTCACCCGGGAGCAAGGCCCGGGCAGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS GCA 72 bp AGGGGTGCGGGCAGTGGGCCTGTGATCTGGAAGGCGTaGTCTCGGGACCCCTCGAGCGGGCAGACACTCAGC +
Preference number: 6 (lower is better)
Translates to: RGAGSGPVIWKA*SRDPSSGQTLS
Trigger: GCTGAGTGTCTGCCCGCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCACAGGCCCACTGCCCGCACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379407.7
ENST00000379410.8
CDS GCA 72 bp TGCCCTGACGCCGTCCGCAGCCGGGTTAGACGGCGCTaGAAAGTCCAGGGGAGTTCGTCTCCGCAGGACCCC +
Preference number: 6 (lower is better)
Translates to: CPDAVRSRVRRR*KVQGSSSPQDP
Trigger: GGGGTCCTGCGGAGACGAACTCCCCTGGACTTTGCAGCGCCGTCTAACCCGGCTGCGGACGGCGTCAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000480267.1
CDS CCA 72 bp GGATGTCCGTGCCCGGGATGTAGTGGAAGAGCTTGTTaGCGGCGGCGTCCCCGCTTCGAGCAGCCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: GCPCPGCSGRAC*RRRPRFEQPRG
Trigger: GCCCCGAGGCTGCTCGAAGCGGGGACGCCGCCGCCAACAAGCTCTTCCACTACATCCCGGGCACGGACATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS CCA 72 bp CCCAGAGGTGGTCGTAGCCGGGGTCCCGGCTCCTCCTaGGGGACCGACCATCTGTCAGAGGCAGCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: PRGGRSRGPGSS*GTDHLSEAARV
Trigger: AACCCTGGCTGCCTCTGACAGATGGTCGGTCCCCCAGGAGGAGCCGGGACCCCGGCTACGACCACCTCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000491024.1
CDS CAA 72 bp CGGTCCCACTGCTCCTGTGCGGGCAGGTGCTGCAGCTaGACCCTCGAGGCACAGACAGCACTGCCGCCGGGT +
Preference number: 6 (lower is better)
Translates to: RSHCSCAGRCCS*TLEAQTALPPG
Trigger: ACCCGGCGGCAGTGCTGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGCCCGCACAGGAGCAGTGGGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000480267.1
CDS TCA 72 bp GGTCCCACTGCTCCTGTGCGGGCAGGTGCTGCAGCTTaGCCCTCGAGGCACAGACAGCACTGCCGCCGGGTT +
Preference number: 6 (lower is better)
Translates to: GPTAPVRAGAAA*PSRHRQHCRRV
Trigger: AACCCGGCGGCAGTGCTGTCTGTGCCTCGAGGGTCAAGCTGCAGCACCTGCCCGCACAGGAGCAGTGGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000480267.1
CDS GCA 72 bp GGGAGTGGGCTCGAGGGCGTGGGTCCACGTGCACTCTaGATGGCACTGAGGAACTCCTCCAGGCCCCGGACA +
Preference number: 6 (lower is better)
Translates to: GSGLEGVGPRAL*MALRNSSRPRT
Trigger: TGTCCGGGGCCTGGAGGAGTTCCTCAGTGCCATGCAGAGTGCACGTGGACCCACGCCCTCGAGCCCACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000491024.1
CDS GCA 72 bp CACCGAGGGGAGTGGGCTCGAGGGCGTGGGTCCACGTaGACTCTGCATGGCACTGAGGAACTCCTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: HRGEWARGRGST*TLHGTEELLQA
Trigger: GGCCTGGAGGAGTTCCTCAGTGCCATGCAGAGTGCACGTGGACCCACGCCCTCGAGCCCACTCCCCTCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000491024.1
CDS CCA 72 bp CTGGGGGCCCGGGAAGCATCCCAAACACCTGTGATCTaGAAGGCGTGCTCTCGGGACCCCTCGAGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: LGAREASQTPVI*KACSRDPSSGQ
Trigger: CTGCCCGCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCACAGGTGTTTGGGATGCTTCCCGGGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS TCA 72 bp TGCCTCTGGGGGCCCGGGAAGCATCCCAAACACCTGTaGTCTGGAAGGCGTGCTCTCGGGACCCCTCGAGCG +
Preference number: 6 (lower is better)
Translates to: CLWGPGKHPKHL*SGRRALGTPRA
Trigger: CGCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCACAGGTGTTTGGGATGCTTCCCGGGCCCCCAGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS TCA 72 bp AGGGGCAGGTACCCTGGAGCTTGGCGAGGGTGGTCCTaGGAACCCACCTCACCGCGGCCATCAGATCCACTG +
Preference number: 6 (lower is better)
Translates to: RGRYPGAWRGWS*EPTSPRPSDPL
Trigger: CAGTGGATCTGATGGCCGCGGTGAGGTGGGTTCTCAGGACCACCCTCGCCAAGCTCCAGGGTACCTGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS GCA 72 bp TGCCACTGCGTCTCAGCTCGGTCCTCCGTCGGCCAATaGTGGCACGGTCAGAGTTGGCCTGGTCCGGTGTGT +
Preference number: 6 (lower is better)
Translates to: CHCVSARSSVGQ*WHGQSWPGPVC
Trigger: ACACACCGGACCAGGCCAACTCTGACCGTGCCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTGGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS CCA 72 bp CACTGCGTCTCAGCTCGGTCCTCCGTCGGCCAATGCTaGCACGGTCAGAGTTGGCCTGGTCCGGTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: HCVSARSSVGQC*HGQSWPGPVCA
Trigger: AGCACACACCGGACCAGGCCAACTCTGACCGTGCCAGCATTGGCCGACGGAGGACCGAGCTGAGACGCAGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379409.6
ENST00000379410.8
CDS GCA 72 bp CGGGAAGCATCCCAAACACCTGTGATCTGGAAGGCGTaGTCTCGGGACCCCTCGAGCGGGCAGACACTCAGC +
Preference number: 6 (lower is better)
Translates to: REASQTPVIWKA*SRDPSSGQTLS
Trigger: GCTGAGTGTCTGCCCGCTCGAGGGGTCCCGAGAGCACGCCTTCCAGATCACAGGTGTTTGGGATGCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379409.6
CDS CCA 72 bp CCCGTCCAGCTCCTCGGAGAAAATGGCCAAGGACGTTaGGTACAGGACCAAGAGCCGGTCCCACTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: PVQLLGENGQGR*VQDQEPVPLLL
Trigger: CAGGAGCAGTGGGACCGGCTCTTGGTCCTGTACCCAACGTCCTTGGCCATTTTCTCCGAGGAGCTGGACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000480267.1
CDS CCA 72 bp CATCCTTGGCTGAGCCCCGGTGTCTCTGAGCGGCTCTaGACTGCAGGGCTCCCTTCTTGGAGAGCAAGTAGG +
Preference number: 6 (lower is better)
Translates to: HPWLSPGVSERL*TAGLPSWRASR
Trigger: CCTACTTGCTCTCCAAGAAGGGAGCCCTGCAGTCCAGAGCCGCTCAGAGACACCGGGGCTCAGCCAAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
ENST00000491024.1
CDS CAA 90 bp CCTTCAATCAGGAAGGAGCGGATCTGCTTCTCCTTCTCCTCCAGGTaGATGTGGACGGCACGGAGTGGGAGCTCCCCCTTGAAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: PSIRKERICFSFSSR*MWTARSGSSPLKQS
Trigger: GCTTTGCTTCAAGGGGGAGCTCCCACTCCGTGCCGTCCACATCAACCTGGAGGAGAAGGAGAAGCAGATCCGCTCCTTCCTGATTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8
CDS GCA 72 bp TTGATGAGGGGGCCTTCAATCAGGAAGGAGCGGATCTaGTTCTCCTTCTCCTCCAGGTTGATGTGGACGGCA +
Preference number: 6 (lower is better)
Translates to: LMRGPSIRKERI*FSFSSRLMWTA
Trigger: TGCCGTCCACATCAACCTGGAGGAGAAGGAGAAGCAGATCCGCTCCTTCCTGATTGAAGGCCCCCTCATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379407.7
ENST00000379409.6
ENST00000379410.8