RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000178385

Ensembl transcript IDs: ENST00000427836.8, ENST00000447645.5, ENST00000457206.1, ENST00000642765.2, ENST00000645881.1, ENST00000646350.1

Found 1305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCATCGGCTCTGCTTACGTGATTCCCCGCCTCCACAGGAGGAACTaGGGCGGGAGCGCCACGGACACCAGGTCCTGGAAGGACCCAGCA +
Preference number: 1 (lower is better)
Translates to: AIGSAYVIPRLHRRN*GGSATDTRSWKDPA
Trigger: TGCTGGGTCCTTCCAGGACCTGGTGTCCGTGGCGCTCCCGCCTCAGTTCCTCCTGTGGAGGCGGGGAATCACGTAAGCAGAGCCGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp CAGAGGGGGCTTGGCTCCTGTTTCCAGCCATCGGCTCTGCTTACGTaGTTCCCCGCCTCCACAGGAGGAACTGAGGCGGGAGCGCCACGG +
Preference number: 1 (lower is better)
Translates to: QRGLGSCFQPSALLT*FPASTGGTEAGAPR
Trigger: CCGTGGCGCTCCCGCCTCAGTTCCTCCTGTGGAGGCGGGGAATCACGTAAGCAGAGCCGATGGCTGGAAACAGGAGCCAAGCCCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp GCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTaGCTGCCACGTGCTCTTCCAAGGGCACTGCAGCTGGAGAACACT +
Preference number: 1 (lower is better)
Translates to: AVRVPGLSYLPFWSQ*LPRALPRALQLENT
Trigger: AGTGTTCTCCAGCTGCAGTGCCCTTGGAAGAGCACGTGGCAGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp TCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTaGCACGTGCTCTTCCAAGGGCACTGCAGCTGGAGAACACTACCT +
Preference number: 1 (lower is better)
Translates to: SGSQGCPTCRFGHSD*HVLFQGHCSWRTLP
Trigger: AGGTAGTGTTCTCCAGCTGCAGTGCCCTTGGAAGAGCACGTGGCAGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp CTTCCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTaGCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATCTGTG +
Preference number: 1 (lower is better)
Translates to: LPQKAVTLSLVPHIC*HIPCRAPPILQSSV
Trigger: CACAGATGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 90 bp TGGCTTCCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTaGTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATCT +
Preference number: 1 (lower is better)
Translates to: WLPQKAVTLSLVPHI*CHIPCRAPPILQSS
Trigger: AGATGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGGAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp TGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTaGCTCCTGGAATCCTTATCTCAACTGAGCTCCTTCTCACCTGGG +
Preference number: 1 (lower is better)
Translates to: CSLNRYCCLYLRGSS*LLESLSQLSSFSPG
Trigger: CCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp ACCAAGCTGTCAGGGTGGTACGAAAAGGAGAGGAAACAGGAGTGCTaGACATGGACCCAGCTCTGGGTAGCTGATGGTGATAACACATCG +
Preference number: 1 (lower is better)
Translates to: TKLSGWYEKERKQEC*TWTQLWVADGDNTS
Trigger: CGATGTGTTATCACCATCAGCTACCCAGAGCTGGGTCCATGTCCAGCACTCCTGTTTCCTCTCCTTTTCGTACCACCCTGACAGCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp CAAGGTGTGCAACATATGAAGCTCCTAATGCCCATCACTAACAAGTaGCACGGAGGCAGGGGAAACAGAGAGTGCCGCTACCGATTCAGG +
Preference number: 1 (lower is better)
Translates to: QGVQHMKLLMPITNK*HGGRGNRECRYRFR
Trigger: CCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTGCCTCCGTGTCACTTGTTAGTGATGGGCATTAGGAGCTTCATATGTTGCACACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp CATGTTACAAGGGGAGGAGATGGCACTGCACTTCAGGTCTCCAAATaGAGTGTGCTAGGAATGGCCTCGCTGACAGTTGGAATCACGGAT +
Preference number: 1 (lower is better)
Translates to: HVTRGGDGTALQVSK*SVLGMASLTVGITD
Trigger: ATCCGTGATTCCAACTGTCAGCGAGGCCATTCCTAGCACACTGCATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp GAGTTGGCTCCTGGAATCCTTATCTCAACTGAGCTCCTTCTCACCTaGGCAACAGGGCTCTCTATCCACCACTCACAACACACAGTCATC +
Preference number: 1 (lower is better)
Translates to: ELAPGILISTELLLT*ATGLSIHHSQHTVI
Trigger: GATGACTGTGTGTTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGATTCCAGGAGCCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 90 bp ATTCTGTATGCAGGGCAAACATGTTACAAGGGGAGGAGATGGCACTaGACTTCAGGTCTCCAAATGCAGTGTGCTAGGAATGGCCTCGCT +
Preference number: 1 (lower is better)
Translates to: ILYAGQTCYKGRRWH*TSGLQMQCARNGLA
Trigger: AGCGAGGCCATTCCTAGCACACTGCATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTAACATGTTTGCCCTGCATACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp GAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTaGCATAGGTTTCTACCACTGGCAAGACCGATGCTAACCTTACTC +
Preference number: 1 (lower is better)
Translates to: EEPERLLGPFHDGCW*HRFLPLARPMLTLL
Trigger: GAGTAAGGTTAGCATCGGTCTTGCCAGTGGTAGAAACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 90 bp AGAATTTCGCCCTTGACTCTCGGCAGGTATGACCCTGGGTGCCTGTaGGCTAGGAGAGGAAATTCTGTATGCAGGGCAAACATGTTACAA +
Preference number: 1 (lower is better)
Translates to: RISPLTLGRYDPGCL*ARRGNSVCRANMLQ
Trigger: TTGTAACATGTTTGCCCTGCATACAGAATTTCCTCTCCTAGCTCACAGGCACCCAGGGTCATACCTGCCGAGAGTCAAGGGCGAAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp CAATGGGTAGAGAACAAACTCCCAGGTTTGGAAGCCAAGCCTCTCTaGGGAGGCACAGAAAAGAACTATCCGATGTCCACGTTCAGTGTG +
Preference number: 1 (lower is better)
Translates to: QWVENKLPGLEAKPL*GGTEKNYPMSTFSV
Trigger: CACACTGAACGTGGACATCGGATAGTTCTTTTCTGTGCCTCCTCAGAGAGGCTTGGCTTCCAAACCTGGGAGTTTGTTCTCTACCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp TTAGTCACCCATCACTGGATTCGACCTCGAGCAGACAGCTCTACCTaGCTCAGGGTCGGAAGAGTGATACAAGGTGTGCAACATATGAAG +
Preference number: 1 (lower is better)
Translates to: LVTHHWIRPRADSST*LRVGRVIQGVQHMK
Trigger: CTTCATATGTTGCACACCTTGTATCACTCTTCCGACCCTGAGTCAGGTAGAGCTGTCTGCTCGAGGTCGAATCCAGTGATGGGTGACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp CCAGCAGGGAAGAAGCAAAGGGATCCAGATTTAGTTGAAGGGTCCTaGAGGCTTCAAGTGGTTCAGACTAGACTAGAAGCACGAGACAGT +
Preference number: 1 (lower is better)
Translates to: PAGKKQRDPDLVEGS*RLQVVQTRLEARDS
Trigger: ACTGTCTCGTGCTTCTAGTCTAGTCTGAACCACTTGAAGCCTGCAGGACCCTTCAACTAAATCTGGATCCCTTTGCTTCTTCCCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp CACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATaGACAGGCTCCAAGAGCATCTATATGAAGAGTAGCCAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: HTRLNKVRVLTCIME*TGSKSIYMKSSQQG
Trigger: TCCCTGCTGGCTACTCTTCATATAGATGCTCTTGGAGCCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp CCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTaGCTCTCTCATCAGACTGTGAGCTCAGTGAGGGAAGGAATTGTG +
Preference number: 1 (lower is better)
Translates to: PSTLGSTPLTSTMPI*LSHQTVSSVREGIV
Trigger: CACAATTCCTTCCCTCACTGAGCTCACAGTCTGATGAGAGAGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp CATGTGTACAGCCTGGAAAACACGGTGGAGCGTCACATCATTAGGTaGGTGATGGGATTAGTACCGAAAAACAGACCGACAACACGCAGT +
Preference number: 1 (lower is better)
Translates to: HVYSLENTVERHIIR*VMGLVPKNRPTTRS
Trigger: ACTGCGTGTTGTCGGTCTGTTTTTCGGTACTAATCCCATCACCCACCTAATGATGTGACGCTCCACCGTGTTTTCCAGGCTGTACACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp GAGGAAATTCTGTATGCAGGGCAAACATGTTACAAGGGGAGGAGATaGCACTGCACTTCAGGTCTCCAAATGCAGTGTGCTAGGAATGGC +
Preference number: 1 (lower is better)
Translates to: EEILYAGQTCYKGRR*HCTSGLQMQCARNG
Trigger: GCCATTCCTAGCACACTGCATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTAACATGTTTGCCCTGCATACAGAATTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp CTGTCAGGGTGGTACGAAAAGGAGAGGAAACAGGAGTGCTGGACATaGACCCAGCTCTGGGTAGCTGATGGTGATAACACATCGATTTTT +
Preference number: 1 (lower is better)
Translates to: LSGWYEKERKQECWT*TQLWVADGDNTSIF
Trigger: AAAAATCGATGTGTTATCACCATCAGCTACCCAGAGCTGGGTCCATGTCCAGCACTCCTGTTTCCTCTCCTTTTCGTACCACCCTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp CTCCATAATATCTGCAGCCTCATCTCTAGCCTAGGTGAGAAGACTTaGAGGCTAGCAGCTGGAATCATGTGGGGCTGTCTTCACTCATCT +
Preference number: 1 (lower is better)
Translates to: LHNICSLISSLGEKT*RLAAGIMWGCLHSS
Trigger: AGATGAGTGAAGACAGCCCCACATGATTCCAGCTGCTAGCCTTCAAGTCTTCTCACCTAGGCTAGAGATGAGGCTGCAGATATTATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp AGTGTGCGTGGCATCGTGCTAGTCCCACCTGGATATACTAATTTATaGACGGCCTTTTCTAGCCAATGGGTAGAGAACAAACTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: SVRGIVLVPPGYTNL*TAFSSQWVENKLPG
Trigger: ACCTGGGAGTTTGTTCTCTACCCATTGGCTAGAAAAGGCCGTCCATAAATTAGTATATCCAGGTGGGACTAGCACGATGCCACGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp GGGCTCTCTATCCACCACTCACAACACACAGTCATCTTTCTGATCTaGCTTCCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATT +
Preference number: 1 (lower is better)
Translates to: GLSIHHSQHTVIFLI*LPQKAVTLSLVPHI
Trigger: AATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGGAAGCCAGATCAGAAAGATGACTGTGTGTTGTGAGTGGTGGATAGAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTaGTGGCATAGGTTTCTACCACTGGCAAGACCGATGCTAACCTTA +
Preference number: 1 (lower is better)
Translates to: NEEPERLLGPFHDGC*WHRFLPLARPMLTL
Trigger: TAAGGTTAGCATCGGTCTTGCCAGTGGTAGAAACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 90 bp CACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATACCACTTGTGTTaGAAACCACAGATCCCAAGTATTAGACGTATTCCCTTCTTGGTG +
Preference number: 1 (lower is better)
Translates to: HGIVPFQESEGYHLC*KPQIPSIRRIPFLV
Trigger: CACCAAGAAGGGAATACGTCTAATACTTGGGATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGGACTATGCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp CTGAGGTTAAGGCACACCAGGCTGAACAAGGTGAGAGTTCTGACATaGATCATGGAATGCACAGGCTCCAAGAGCATCTATATGAAGAGT +
Preference number: 1 (lower is better)
Translates to: LRLRHTRLNKVRVLT*IMECTGSKSIYMKS
Trigger: ACTCTTCATATAGATGCTCTTGGAGCCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGCCTTAACCTCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp AGTGTAATCCAGCTATTGGTAGTTTCTCGAGCCACAGAGGTTCTGTaGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACG +
Preference number: 1 (lower is better)
Translates to: SVIQLLVVSRATEVL*IVWTMMYTEHTYRT
Trigger: CGTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCTGTGGCTCGAGAAACTACCAATAGCTGGATTACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp CCGATGACCCTCTCAGCGAATCCGATGTTAAAGCTCCTAACTAGGTaGCCCTTTAGCACTACAGACGTAAAAATGACTCTAATGCACTCC +
Preference number: 1 (lower is better)
Translates to: PMTLSANPMLKLLTR*PFSTTDVKMTLMHS
Trigger: GGAGTGCATTAGAGTCATTTTTACGTCTGTAGTGCTAAAGGGTCACCTAGTTAGGAGCTTTAACATCGGATTCGCTGAGAGGGTCATCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp ACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTaGATAGGAGGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGG +
Preference number: 1 (lower is better)
Translates to: TDLPKFGEKEHRSHY*IGGASKSQCKKDMW
Trigger: CCACATGTCTTTCTTACACTGTGACTTTGATGCTCCTCCTATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp CAGCTATTGGTAGTTTCTCGAGCCACAGAGGTTCTGTGGATCGTCTaGACAATGATGTACACAGAGCATACGTACAGGACGTATAGGTAT +
Preference number: 1 (lower is better)
Translates to: QLLVVSRATEVLWIV*TMMYTEHTYRTYRY
Trigger: ATACCTATACGTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCTGTGGCTCGAGAAACTACCAATAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp GTTGCAAACCACAGATCCCAAGTATTAGACGTATTCCCTTCTTGGTaGAGGCCTACTCTAGAAGAATCAAAAACCGATGACCCTCTCAGC +
Preference number: 1 (lower is better)
Translates to: VANHRSQVLDVFPSW*RPTLEESKTDDPLS
Trigger: GCTGAGAGGGTCATCGGTTTTTGATTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCTGTGGTTTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp TCAGGTCTCCAAATGCAGTGTGCTAGGAATGGCCTCGCTGACAGTTaGAATCACGGATACATTAATTACAGCGAAGGCAAAAGTAAGCTA +
Preference number: 1 (lower is better)
Translates to: SGLQMQCARNGLADS*NHGYINYSEGKSKL
Trigger: TAGCTTACTTTTGCCTTCGCTGTAATTAATGTATCCGTGATTCCAACTGTCAGCGAGGCCATTCCTAGCACACTGCATTTGGAGACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp TGTGTTGCAAACCACAGATCCCAAGTATTAGACGTATTCCCTTCTTaGTGGAGGCCTACTCTAGAAGAATCAAAAACCGATGACCCTCTC +
Preference number: 1 (lower is better)
Translates to: CVANHRSQVLDVFPS*WRPTLEESKTDDPL
Trigger: GAGAGGGTCATCGGTTTTTGATTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCTGTGGTTTGCAACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp GGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATaGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGAA +
Preference number: 1 (lower is better)
Translates to: GWSYITFYDLALEIT*HHFHSHRPAQIRGE
Trigger: TTCTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp ATCTCCAGACAGCACCAGGTTGGAGCTATATCACCTTTTATGACTTaGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTG +
Preference number: 1 (lower is better)
Translates to: ISRQHQVGAISPFMT*LWKSHGITSIVTDL
Trigger: CAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGCTGTCTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 90 bp AAGCCAATGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATaGTTCCCTTTACTCCTGAGGTTAAGGCACACCAGGCTGAACAAG +
Preference number: 1 (lower is better)
Translates to: KPMFVPFYFNDVFPT*FPLLLRLRHTRLNK
Trigger: CTTGTTCAGCCTGGTGTGCCTTAACCTCAGGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACATTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 90 bp AAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATaGCAAGGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACAC +
Preference number: 1 (lower is better)
Translates to: KQQKPNNNNSTQMTA*QGTPRKVISALTKH
Trigger: GTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 90 bp TTAGGAGTTGCTGTGAGTTGCTGTAGGTGCCTGAATCTTCTACTCTaGGCAACAACCAGCTTCATTCAAAGTCTGGAACTTCATTCAAAG +
Preference number: 1 (lower is better)
Translates to: LGVAVSCCRCLNLLL*ATTSFIQSLELHSK
Trigger: CTTTGAATGAAGTTCCAGACTTTGAATGAAGCTGGTTGTTGCCCAGAGTAGAAGATTCAGGCACCTACAGCAACTCACAGCAACTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp TCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTaGCTTGACTCTAAAGGAGGACCAGAATGTGTCTCTACTTCCACT +
Preference number: 1 (lower is better)
Translates to: STEMNNCAQIHEQQH*LDSKGGPECVSTST
Trigger: AGTGGAAGTAGAGACACATTCTGGTCCTCCTTTAGAGTCAAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp GGCACACAGAAAGCATTCAATCAATACACACTTGTTGAATCAAACTaGATAGAAATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATG +
Preference number: 1 (lower is better)
Translates to: GTQKAFNQYTLVESN*IEMKNQKDSWGPFM
Trigger: CATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATTTCTATTCAGTTTGATTCAACAAGTGTGTATTGATTGAATGCTTTCTGTGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 90 bp CTAATAGCAGCAAAACTACTAAACCATGAAGACATAGAAGGCATCTaGTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTGAG +
Preference number: 1 (lower is better)
Translates to: LIAAKLLNHEDIEGI*SARKLQNLLIKSTE
Trigger: CTCAGTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATGTCTTCATGGTTTAGTAGTTTTGCTGCTATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 90 bp GGCAACAACCAGCTTCATTCAAAGTCTGGAACTTCATTCAAAGTCTaGAACTTCATTCAAAGTCTTGTCTTTCTAACAAGACGAACAGGC +
Preference number: 1 (lower is better)
Translates to: GNNQLHSKSGTSFKV*NFIQSLVFLTRRTG
Trigger: GCCTGTTCGTCTTGTTAGAAAGACAAGACTTTGAATGAAGTTCCAGACTTTGAATGAAGTTCCAGACTTTGAATGAAGCTGGTTGTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp CAATTATGGATGGCTGGTTTTTATTTCTCTACCCATTGGCCTTGGTaGCATCATGACATTCCCCTGAGTTTGGTTAATGAAAGCAAACAA +
Preference number: 1 (lower is better)
Translates to: QLWMAGFYFSTHWPW*HHDIPLSLVNESKQ
Trigger: TTGTTTGCTTTCATTAACCAAACTCAGGGGAATGTCATGATGTCACCAAGGCCAATGGGTAGAGAAATAAAAACCAGCCATCCATAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 90 bp CATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTaGGAACTGTTCCATTATAAACATATTTTTCTTGCTCTAGGGAGA +
Preference number: 1 (lower is better)
Translates to: HLLSAKATESSHKVY*ELFHYKHIFLALGR
Trigger: TCTCCCTAGAGCAAGAAAAATATGTTTATAATGGAACAGTTCTCAGTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTCGGCTCTGCTTACGTaGTTCCCCGCCTCCACAGGA +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREASALLT*FPASTG
Trigger: TCCTGTGGAGGCGGGGAATCACGTAAGCAGAGCCGA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCACCTCGGATCTCACTaGAGCCGGAAGGAAGTCACG +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAHLGSH*SRKEVT
Trigger: CGTGACTTCCTTCCGGCTGCAGTGAGATCCGAGGTG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACATGAGTTGGGGTCTTaGGGAAGCGGCGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGHELGS*GSGVWG
Trigger: CCCCCACACGCCGCTTCCCCAAGACCCCAACTCATG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGGGCTGATGGATTGTTaGTTGGTGAATCCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTGLMDC*LVNPWP
Trigger: AGGCCAGGGATTCACCAATCAACAATCCATCAGCCC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCCGTTTTGGTCACAGTaGCTGCCACGTGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAPFWSQ*LPRALP
Trigger: TGGAAGAGCACGTGGCAGTCACTGTGACCAAAACGG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGACCCTGGGTGCCTGTaGGCTAGGAGAGGAAATTCT +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREADPGCL*ARRGNS
Trigger: AGAATTTCCTCTCCTAGCTCACAGGCACCCAGGGTC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTACAGTGACTGCCACGTaGTCTTCCAAGGGCACTGCA +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREATVTAT*SSKGTA
Trigger: TGCAGTGCCCTTGGAAGAGCACGTGGCAGTCACTGT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTACAGATGATGATGGGTaGCTGCCTCAGTTACCTCAG +
Preference number: 2 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTTDDDG*LPQLPQ
Trigger: CTGAGGTAACTGAGGCAGGCACCCATCATCATCTGT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATCCAGCCATCGGCTCTaGTTACGTGATTCCCCGCCT +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGSSHRL*LRDSPP
Trigger: AGGCGGGGAATCACGTAAGCAGAGCCGATGGCTGGA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGTAAGGGCGTTCATGTaGGCCAAGGTATTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAVRAFM*AKVFWA
Trigger: AGCCCAGAATACCTTGGCGCACATGAACGCCCTTAC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAAGTGCCGCACATTTGCTaGCACATCCCGTGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: STELLLTWATGLSIHHSQVPHIC*HIPCRA
Trigger: AGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCATGAGTTGGGGTCTTaGGGAAGCGGCGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRHELGS*GSGVWG
Trigger: CCCCCACACGCCGCTTCCCCAAGACCCCAACTCATG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTACAAGGGGAGGAGATaGCACTGCACTTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAYKGRR*HCTSGL
Trigger: GAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp CTGGCTTCCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTaGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATC +
Preference number: 2 (lower is better)
Translates to: LASTKGSDFVLSAAH*LPHPVPSSPDPSII
Trigger: GATGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGGAAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTCTGGGAGCAAGCAGCTaGAATTCTTGGCTAAGTGTA +
Preference number: 2 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTLGASS*NSWLSV
Trigger: TACACTTAGCCAAGAATTTCAGCTGCTTGCTCCCAG...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACTCCACAGGAGGAACTaGGGCGGGAGCGCCACGGAC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRLHRRN*GGSATD
Trigger: GTCCGTGGCGCTCCCGCCTCAGTTCCTCCTGTGGAG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAAAAGTAAGCTACAGTaGCAGGGAGCTGGGGGCGGA +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGKSKLQ*QGAGGG
Trigger: TCCGCCCCCAGCTCCCTGTCACTGTAGCTTACTTTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTACCCAACTCCTAAGCTaGCTCCACTCTGTCCTATCA +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREATQLLS*LHSVLS
Trigger: TGATAGGACAGAGTGGAGCCAGCTTAGGAGTTGGGT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTaGGCTCCTGGAATCCTTATCTCAACTGAGCTCCTTCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: LQPQPVLLSLPEGLE*APGILISTELLLTW
Trigger: CCAGGTGAGAAGGAGCTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATGGATTGTTGATTGGTaGATCCCTGGCCTTCGGGTC +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGWIVDW*IPGLRV
Trigger: GACCCGAAGGCCAGGGATTCACCAATCAACAATCCA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACTCCACAGGAGGAACTaGGGCGGGAGCGCCACGGAC +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEELHRRN*GGSATD
Trigger: GTCCGTGGCGCTCCCGCCTCAGTTCCTCCTGTGGAG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGACGATCTCACACATaGGTTTCTGGCACTTTTAGG +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGRSHT*VSGTFR
Trigger: CCTAAAAGTGCCAGAAACTCATGTGTGAGATCGTCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAGCAAAGGGGGCTGCTaGGAGTTTACATGGTTTTCA +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREASKGGC*EFTWFS
Trigger: TGAAAACCATGTAAACTCTCAGCAGCCCCCTTTGCT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTGTGCCGCACATTTGCTaGCACATCCCGTGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPVPHIC*HIPCRA
Trigger: AGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCTGTCAGAGGGGGCTTaGCTCCTGTTTCCAGCCATC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRLSEGA*LLFPAI
Trigger: GATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTCGGCTCTGCTTACGTaGTTCCCCGCCTCCACAGGA +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLSALLT*FPASTG
Trigger: TCCTGTGGAGGCGGGGAATCACGTAAGCAGAGCCGA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGACTCTCGGCAGGTATaGCCCTGGGTGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRDSRQV*PWVPVS
Trigger: GCTCACAGGCACCCAGGGTCATACCTGCCGAGAGTC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAAACAACCCCTGTGTTaGAACCAGGCAGTATTGGAA +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAKQPLC*NQAVLE
Trigger: TTCCAATACTGCCTGGTTTCAACACAGGGGTTGTTT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCTGGAGAACACTACCTaGCAAATAGCAAAGCAGATC +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALENTT*QIAKQI
Trigger: GATCTGCTTTGCTATTTGGCAGGTAGTGTTCTCCAG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCAGGGCTGTCCTACCTaGCGTTTTGGTCACAGTGAC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRQGCPT*RFGHSD
Trigger: GTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAGGGAGAAGGCACTTTaGCATGGGAGCACATCTGTT +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGREKAL*HGSTSV
Trigger: AACAGATGTGCTCCCATGGCAAAGTGCCTTCTCCCT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGCCATGTGTACAGCCTaGAAAACACGGTGGAGCGTC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRAMCTA*KTRWSV
Trigger: GACGCTCCACCGTGTTTTCCAGGCTGTACACATGGC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGCAGGGCCCTCTAAATaGGGACTGGTGAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGAGPSK*GLVKTK
Trigger: CTTTGTTTTCACCAGTCCCCATTTAGAGGGCCCTGC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAACATGGACCCAGCTCTaGGTAGCTGATGGTGATAAC +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGTWTQL*VADGDN
Trigger: GTTATCACCATCAGCTACCCAGAGCTGGGTCCATGT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGGAAACAGGAGTGCTaGACATGGACCCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRRKQEC*TWTQLW
Trigger: CCAGAGCTGGGTCCATGTCCAGCACTCCTGTTTCCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGCAGCTGGAATCATGTaGGGCTGTCTTCACTCATCT +
Preference number: 2 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDAAGIM*GCLHSS
Trigger: AGATGAGTGAAGACAGCCCCACATGATTCCAGCTGC...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 90 bp CACACAGTCATCTTTCTGATCTGGCTTCCACAAAAGGCAGTGACTTaGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: HTVIFLIWLPQKAVT*SLVPHICCHIPCRA
Trigger: AGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGGAAGCCAGATCAGAAAGATGACTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGGATCGTCTGGACAATaGTGTACACAGAGCATACGT +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGGSSGQ*CTQSIR
Trigger: ACGTATGCTCTGTGTACATCATTGTCCAGACGATCC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGAGGAGGAAAGGAGATaGTCAAATTTGTTTGCCTGT +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAEEERR*SNLFAC
Trigger: ACAGGCAAACAAATTTGATCATCTCCTTTCCTCCTC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGACTCTCGGCAGGTATaGCCCTGGGTGCCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEDSRQV*PWVPVS
Trigger: GCTCACAGGCACCCAGGGTCATACCTGCCGAGAGTC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAGAATCAAAAACCGATaGCCCTCTCAGCGAATCCGA +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGRIKNR*PSQRIR
Trigger: TCGGATTCGCTGAGAGGGTCATCGGTTTTTGATTCT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGATGATGATGGGTGCCTaGCTCAGTTACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRMMMGA*LSYLSL
Trigger: GAGGCTGAGGTAACTGAGGCAGGCACCCATCATCAT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATACTGCGGGGTTAGATaGCAACATTTCACCAGGGTT +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGYCGVR*QHFTRV
Trigger: AACCCTGGTGAAATGTTGGCATCTAACCCCGCAGTA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGTGCTGCCACATCCCGTaGCGAGCTCCCCCGATCCTT +
Preference number: 2 (lower is better)
Translates to: APGWSYITFYDLALEITWCCHIP*RAPPIL
Trigger: AAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCA...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATCAGCACTCAGATGACTaGATGCCAAGGGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHQHSDD*MPRDSQ
Trigger: CTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTG...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTACATCTCTAGATGGATaGAAGTATCATGAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREATSLDG*KYHELG
Trigger: CCCCAACTCATGATACTTCCATCCATCTAGAGATGT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCGAGCTCCTTCTCACCTaGGCAACAGGGCTCTCTATC +
Preference number: 2 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFELLLT*ATGLSI
Trigger: GATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTC...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAAAATAAGCAGAAAATaGTGTGGGTGGAAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAKISRK*CGWKVL
Trigger: GAGGACTTTCCACCCACATCATTTTCTGCTTATTTT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAACTGGCTTCTTTACTaGGGGGTTAGATGCCAACAT +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGNWLLY*GVRCQH
Trigger: ATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATTTAGTGCCGCACATTTaGTGCCACATCCCGTGCCGA +
Preference number: 2 (lower is better)
Translates to: SLISLVADDRCQLEQLPYLVPHI*CHIPCR
Trigger: TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAA...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR GCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCATCCAACTCCACAGCTaGAGCCTCAACCGGTATTGT +
Preference number: 2 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSIQLHS*SLNRYC
Trigger: ACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGGCCTCGCTGACAGTTaGAATCACGGATACATTAAT +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGGLADS*NHGYIN
Trigger: ATTAATGTATCCGTGATTCCAACTGTCAGCGAGGCC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTGGAAAAAGCGGGCCTaGAAAGAACACTACCCCCAT +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRWKKRA*KEHYPH
Trigger: ATGGGGGTAGTGTTCTTTCCAGGCCCGCTTTTTCCA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGACAAACTCCCAGGTTTaGAAGCCAAGCCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRTNSQV*KPSLSE
Trigger: CTCAGAGAGGCTTGGCTTCCAAACCTGGGAGTTTGT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACATGATGGCTGTTGGTaGCATAGGTTTCTACCACTG +
Preference number: 2 (lower is better)
Translates to: GLSSLISLVADDRCQLEQHDGCW*HRFLPL
Trigger: CAGTGGTAGAAACCTATGCCACCAACAGCCATCATG...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACCAGAATTTCGCCCTTaGCTCTCGGCAGGTATGACC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRPEFRP*LSAGMT
Trigger: GGTCATACCTGCCGAGAGTCAAGGGCGAAATTCTGG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAGGACACACTCTAGCTaGGCAAAGGCTGCATTCGGC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRRTHSS*AKAAFG
Trigger: GCCGAATGCAGCCTTTGCTCAGCTAGAGTGTGTCCT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACCCATCACTAACAAGTaGCACGGAGGCAGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRPITNK*HGGRGN
Trigger: GTTTCCCCTGCCTCCGTGTCACTTGTTAGTGATGGG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTCAGGGTCGGAAGAGTaGTACAAGGTGTGCAACATA +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSGSEE*YKVCNI
Trigger: TATGTTGCACACCTTGTATCACTCTTCCGACCCTGA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCCAAGAGCATCTATATaGAGAGTAGCCAGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRPRASI*RVASRE
Trigger: TTCCCTGCTGGCTACTCTTCATATAGATGCTCTTGG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTCCAGCCATCGGCTCTaGTTACGTGATTCCCCGCCT +
Preference number: 2 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFSSHRL*LRDSPP
Trigger: AGGCGGGGAATCACGTAAGCAGAGCCGATGGCTGGA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACAGGGCTGTCCTACCTaGCGTTTTGGTCACAGTGAC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRQGCPT*RFGHSD
Trigger: GTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGGGAGGAGATGGCACTaGACTTCAGGTCTCCAAATG +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLGRRWH*TSGLQM
Trigger: CATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGGAGTTCACAGGGACTaGTCGTATTTAGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRGVHRD*SYLAGP
Trigger: GGGCCCTGCTAAATACGAGCAGTCCCTGTGAACTCC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGTAATCCACAGATTTaGTTTTGTTTCGACAGTTTC +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGNPQI*FCFDSF
Trigger: GAAACTGTCGAAACAAAAGCAAATCTGTGGATTACC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTAGTGCCGCACATTTaGTGCCACATCCCGTGCCGA +
Preference number: 2 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKLVPHI*CHIPCR
Trigger: TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAA...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATACTCAGATGACTGCATaGCAAGGGACTCCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHTQMTA*QGTPRK
Trigger: TTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGT...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACTGTCAGAGGGGGCTTaGCTCCTGTTTCCAGCCATC +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEELSEGA*LLFPAI
Trigger: GATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCAAGGGCACTGCAGCTaGAGAACACTACCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLQGHCS*RTLPAK
Trigger: TTTGGCAGGTAGTGTTCTCCAGCTGCAGTGCCCTTG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTGGGGAAGCGGCGTGTaGGGGAAAGGAGCAATGGGG +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSWGSGV*GKGAMG
Trigger: CCCCATTGCTCCTTTCCCCCACACGCCGCTTCCCCA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTACAGTTTCTAAGCAGTaGAACAATTACCTAACAGTG +
Preference number: 2 (lower is better)
Translates to: QGKQRVPLPIQVTQRREATVSKQ*NNYLTV
Trigger: CACTGTTAGGTAATTGTTCCACTGCTTAGAAACTGT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGTCTATTTTAGGAACTaGCTTCTTTACTGCGGGGTT +
Preference number: 2 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGVYFRN*LLYCGV
Trigger: AACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGAC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAAGAGCTCCTTCTCACCTaGGCAACAGGGCTCTCTATC +
Preference number: 2 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKELLLT*ATGLSI
Trigger: GATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTC...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATCTGAGGGGCTCGAGTTaGCTCCTGGAATCCTTATCT +
Preference number: 2 (lower is better)
Translates to: SLISLVADDRCQLEQLPYLRGSS*LLESLS
Trigger: AGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAG...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 90 bp GTAAGCTACAGTGACAGGGAGCTGGGGGCGGAGGGAGAAGGCACTTaGCCATGGGAGCACATCTGTTTTATAATAAGCAGGTCTATAATT +
Preference number: 2 (lower is better)
Translates to: VSYSDRELGAEGEGT*PWEHICFIISRSII
Trigger: AATTATAGACCTGCTTATTATAAAACAGATGTGCTCCCATGGCAAAGTGCCTTCTCCCTCCGCCCCCAGCTCCCTGTCACTGTAGCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGTACCAAGTATGTTGTaGGCCACTGATCCTAATAGC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRVPSML*ATDPNS
Trigger: GCTATTAGGATCAGTGGCTCACAACATACTTGGTAC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACCAGAATTTCGCCCTTaGCTCTCGGCAGGTATGACC +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEPEFRP*LSAGMT
Trigger: GGTCATACCTGCCGAGAGTCAAGGGCGAAATTCTGG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAAACAACCCCTGTGTTaGAACCAGGCAGTATTGGAA +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRKQPLC*NQAVLE
Trigger: TTCCAATACTGCCTGGTTTCAACACAGGGGTTGTTT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCATTGTTGTCTCTACCTaGGGGGCTCGAGTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCIVVST*GARVGS
Trigger: GGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAAT...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCTTCAGGTCTCCAAATaGAGTGTGCTAGGAATGGCC +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLLQVSK*SVLGMA
Trigger: GGCCATTCCTAGCACACTGCATTTGGAGACCTGAAG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGCCACAGAGGTTCTGTaGATCGTCTGGACAATGATG +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLATEVL*IVWTMM
Trigger: CATCATTGTCCAGACGATCCACAGAACCTCTGTGGC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGCCATGTGTACAGCCTaGAAAACACGGTGGAGCGTC +
Preference number: 2 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFAMCTA*KTRWSV
Trigger: GACGCTCCACCGTGTTTTCCAGGCTGTACACATGGC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTTAAGGGGAAGGAATaGGAGCTGTCAGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVKGKE*ELSGSQ
Trigger: CTGGGACCCTGACAGCTCCCATTCCTTCCCCTTAAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGTGAAATGTGTGGCCTaGGGCCAAAGGAACTGGTGT +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRVKCVA*GQRNWC
Trigger: ACACCAGTTCCTTTGGCCCCAGGCCACACATTTCAC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATACAAGGGGAGGAGATaGCACTGCACTTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRYKGRR*HCTSGL
Trigger: GAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGACATGGACCCAGCTCTaGGTAGCTGATGGTGATAAC +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLTWTQL*VADGDN
Trigger: GTTATCACCATCAGCTACCCAGAGCTGGGTCCATGT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAATGTTCAGTGTGCGTaGCATCGTGCTAGTCCCACC +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRNVQCA*HRASPT
Trigger: GGTGGGACTAGCACGATGCCACGCACACTGAACATT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGTGAGCCACCAATCCTaGCCAAGTGGAACCCACTTT +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRVSHQS*PSGTHF
Trigger: AAAGTGGGTTCCACTTGGCCAGGATTGGTGGCTCAC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp ACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCACCAGGGTaGGACGATCTCACACATGAGTTTCTGGCACTTTTAGGAGGGATT +
Preference number: 2 (lower is better)
Translates to: TGFFTAGLDANISPG*DDLTHEFLALLGGI
Trigger: AATCCCTCCTAAAAGTGCCAGAAACTCATGTGTGAGATCGTCCAACCCTGGTGAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp GGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATACCACTaGTGTTGCAAACCACAGATCCCAAGTATTAGACGTATTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GSHGIVPFQESEGYH*CCKPQIPSIRRIPF
Trigger: GAAGGGAATACGTCTAATACTTGGGATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGACCATGGGCACCCGTTaGAAACTGTTAAGAAAGCCA +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLTMGTR*KLLRKP
Trigger: TGGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCTGTTGCCAAGTGTTTaGGATTTTCCACCCTTTTTC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRLLPSV*DFPPFF
Trigger: GAAAAAGGGTGGAAAATCTCAAACACTTGGCAACAG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAACAGATGATGATGGGTaGCTGCCTCAGTTACCTCAG +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRTDDDG*LPQLPQ
Trigger: CTGAGGTAACTGAGGCAGGCACCCATCATCATCTGT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTTTGGTCACAGTGACTaGCACGTGCTCTTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: HRRHLLSAKATESSHKVYFGHSD*HVLFQG
Trigger: CCCTTGGAAGAGCACGTGGCAGTCACTGTGACCAAA...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGGGAGGAGATGGCACTaGACTTCAGGTCTCCAAATG +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEGRRWH*TSGLQM
Trigger: CATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTAAGGGCGTTCATGTaGGCCAAGGTATTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVRAFM*AKVFWA
Trigger: AGCCCAGAATACCTTGGCGCACATGAACGCCCTTAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGCCTTCCTGCCGCGGTaGAAAATGAGGTCTATTTTA +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLAFLPR*KMRSIL
Trigger: TAAAATAGACCTCATTTTGCACCGCGGCAGGAAGGC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCACGGACACCAGGTCCTaGAAGGACCCAGCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSTDTRS*KDPAVS
Trigger: AGAGACTGCTGGGTCCTTCCAGGACCTGGTGTCCGT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGGAAGTATCATGAGTTaGGGTCTTGGGGAAGCGGCG +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEGSIMS*GLGEAA
Trigger: CGCCGCTTCCCCAAGACCCCAACTCATGATACTTCC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCAAGTTTTCAAGCCTTaGTTGCGGCTACTGTATAGT +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRQVFKP*LRLLYS
Trigger: ACTATACAGTAGCCGCAACCAAGGCTTGAAAACTTG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGAAGGCACTTTGCCATaGGAGCACATCTGTTTTATA +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHREGTLP*EHICFI
Trigger: TATAAAACAGATGTGCTCCCATGGCAAAGTGCCTTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGCAGGGCCCTCTAAATaGGGACTGGTGAAAACAAAG +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRAGPSK*GLVKTK
Trigger: CTTTGTTTTCACCAGTCCCCATTTAGAGGGCCCTGC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAATGTCATAGGCCTGTaGCTGGCACCGACCAAGCTG +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAENVIGL*LAPTKL
Trigger: CAGCTTGGTCGGTGCCAGCCACAGGCCTATGACATT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCTGAATCTTCTACTCTaGGCAACAACCAGCTTCATT +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRLNLLL*ATTSFI
Trigger: AATGAAGCTGGTTGTTGCCCAGAGTAGAAGATTCAG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAAAACCAGAAAGACTCCTaGGGCCCTTTCATGATGGCT +
Preference number: 2 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKNQKDS*GPFMMA
Trigger: AGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTT...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTAATCTGCCACACACTTaGTCAGATGTATTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVNLPHT*SDVFPK
Trigger: CTTGGGGAATACATCTGACCAAGTGTGTGGCAGATT...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTGGATTGTTGATTGGTaGATCCCTGGCCTTCGGGTC +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEWIVDW*IPGLRV
Trigger: GACCCGAAGGCCAGGGATTCACCAATCAACAATCCA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCCGTTTTGGTCACAGTaGCTGCCACGTGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLPFWSQ*LPRALP
Trigger: TGGAAGAGCACGTGGCAGTCACTGTGACCAAAACGG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGCACAAAAGTCAGTCTaGAATGTCACATCTCTAGAT +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRAQKSV*NVTSLD
Trigger: ATCTAGAGATGTGACATTTCAGACTGACTTTTGTGC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGACCCTGGGTGCCTGTaGGCTAGGAGAGGAAATTCT +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLDPGCL*ARRGNS
Trigger: AGAATTTCCTCTCCTAGCTCACAGGCACCCAGGGTC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAGGACACACTCTAGCTaGGCAAAGGCTGCATTCGGC +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLRTHSS*AKAAFG
Trigger: GCCGAATGCAGCCTTTGCTCAGCTAGAGTGTGTCCT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATACACAGTCATCTTTCTaGTCTGGCTTCCACAAAAGG +
Preference number: 2 (lower is better)
Translates to: SLISLVADDRCQLEQLPYTQSSF*SGFHKR
Trigger: CCTTTTGTGGAAGCCAGATCAGAAAGATGACTGTGT...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGGAGTTCACAGGGACTaGTCGTATTTAGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLGVHRD*SYLAGP
Trigger: GGGCCCTGCTAAATACGAGCAGTCCCTGTGAACTCC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGAGAGGAAACAGGAGTaGTGGACATGGACCCAGCTC +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSERKQE*WTWTQL
Trigger: GAGCTGGGTCCATGTCCAGCACTCCTGTTTCCTCTC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGACTCAGATGACTGCATaGCAAGGGACTCCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: APGWSYITFYDLALEITWTQMTA*QGTPRK
Trigger: TTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGT...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGTTAAGGGGAAGGAATaGGAGCTGTCAGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSVKGKE*ELSGSQ
Trigger: CTGGGACCCTGACAGCTCCCATTCCTTCCCCTTAAC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAGGAAACAGGAGTGCTaGACATGGACCCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLRKQEC*TWTQLW
Trigger: CCAGAGCTGGGTCCATGTCCAGCACTCCTGTTTCCT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAACCAAGCTGTCAGGGTaGTACGAAAAGGAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRTKLSG*YEKERK
Trigger: TTTCCTCTCCTTTTCGTACCACCCTGACAGCTTGGT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGACATTTCACCAGGGTTaGACGATCTCACACATGAGT +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLTFHQG*TISHMS
Trigger: ACTCATGTGTGAGATCGTCCAACCCTGGTGAAATGT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGACGTATTCCCTTCTTaGTGGAGGCCTACTCTAGAA +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRDVFPS*WRPTLE
Trigger: TTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAGTCTCCCAAGTAGCTaGGATTATAGGCATCCACCA +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRSLPSS*DYRHPP
Trigger: TGGTGGATGCCTATAATCCCAGCTACTTGGGAGACT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGGGCTGATGGATTGTTaGTTGGTGAATCCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSGLMDC*LVNPWP
Trigger: AGGCCAGGGATTCACCAATCAACAATCCATCAGCCC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTTACCTCAGCCTCTGTaGAGGCTAAAAATAAATAAC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRLPQPL*RLKINN
Trigger: GTTATTTATTTTTAGCCTTCACAGAGGCTGAGGTAA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGCCTCCACAGGATTCTaGGAAAAGAAACTAAAACGA +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLASTGF*EKKLKR
Trigger: TCGTTTTAGTTTCTTTTCTCAGAATCCTGTGGAGGC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGTTGAGCTATTAAGGTaGAATGTGTGGCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSVELLR*NVWPGA
Trigger: GGCCCCAGGCCACACATTTCACCTTAATAGCTCAAC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCCCTTTTCAGGAGTCTaGGGGATACCACTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEPFSGV*GIPLVL
Trigger: CAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTCAGATCAACGGAGATaGATAATTGTGCACAAATAC +
Preference number: 2 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSDQRR*IIVHKY
Trigger: GTATTTGTGCACAATTATTCATCTCCGTTGATCTGA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCTTCAGGTCTCCAAATaGAGTGTGCTAGGAATGGCC +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAELQVSK*SVLGMA
Trigger: GGCCATTCCTAGCACACTGCATTTGGAGACCTGAAG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTTGCAAAATACAATCTaGCACACACTTGGTCAGATG +
Preference number: 2 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVLQNTI*HTLGQM
Trigger: CATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAA...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGTGAAATGTGTGGCCTaGGGCCAAAGGAACTGGTGT +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSVKCVA*GQRNWC
Trigger: ACACCAGTTCCTTTGGCCCCAGGCCACACATTTCAC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGAAGGCACTTTGCCATaGGAGCACATCTGTTTTATA +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLEGTLP*EHICFI
Trigger: TATAAAACAGATGTGCTCCCATGGCAAAGTGCCTTC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp CATTGTGTATACCACGTTTTGTCTGGGAGCAAGCAGCTGAAATTCTaGGCTAAGTGTAATCCAGCTATTGGTAGTTTCTCGAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: HCVYHVLSGSKQLKF*AKCNPAIGSFSSHR
Trigger: TCTGTGGCTCGAGAAACTACCAATAGCTGGATTACACTTAGCCAAGAATTTCAGCTGCTTGCTCCCAGACAAAACGTGGTATACACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAGCCCTCCTCATAAATaGGGGGTGTATGCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAESPPHK*GVYAFC
Trigger: ACAGAAAGCATACACCCCTCATTTATGAGGAGGGCT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGACCATGGGCACCCGTTaGAAACTGTTAAGAAAGCCA +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAETMGTR*KLLRKP
Trigger: TGGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTACCAAGTATGTTGTaGGCCACTGATCCTAATAGC +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVPSML*ATDPNS
Trigger: GCTATTAGGATCAGTGGCTCACAACATACTTGGTAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGGACGATCTCACACATaGGTTTCTGGCACTTTTAGG +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEGRSHT*VSGTFR
Trigger: CCTAAAAGTGCCAGAAACTCATGTGTGAGATCGTCC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGGATCCAGATTTAGTTaGAGGGTCCTGCAGGCTTCA +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSGSRFS*RVLQAS
Trigger: TGAAGCCTGCAGGACCCTTCAACTAAATCTGGATCC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCTGGAGAACACTACCTaGCAAATAGCAAAGCAGATC +
Preference number: 2 (lower is better)
Translates to: HRRHLLSAKATESSHKVYLENTT*QIAKQI
Trigger: GATCTGCTTTGCTATTTGGCAGGTAGTGTTCTCCAG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATTTTCAAGCCTTGGTTaGGGCTACTGTATAGTCAGA +
Preference number: 2 (lower is better)
Translates to: LSHLSLAMLSITPAATLRFSSLG*GYCIVR
Trigger: TCTGACTATACAGTAGCCGCAACCAAGGCTTGAAAA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCTGCTAACGCCCCTCTaGAGAAAATGTTCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSLLTPL*RKCSVC
Trigger: GCACACTGAACATTTTCTGCAGAGGGGCGTTAGCAG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTTCTGTGGATCGTCTaGACAATGATGTACACAGAG +
Preference number: 2 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVLWIV*TMMYTE
Trigger: CTCTGTGTACATCATTGTCCAGACGATCCACAGAAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCCACAGAGGTTCTGTaGATCGTCTGGACAATGATG +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSATEVL*IVWTMM
Trigger: CATCATTGTCCAGACGATCCACAGAACCTCTGTGGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTGGGGCCAAAGGAACTaGTGTGGGTTGAGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLWGQRN*CGLRGK
Trigger: TTTACCTCTCAACCCACACCAGTTCCTTTGGCCCCA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCACCCAACTCCTAAGCTaGCTCCACTCTGTCCTATCA +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSTQLLS*LHSVLS
Trigger: TGATAGGACAGAGTGGAGCCAGCTTAGGAGTTGGGT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTACAAACTCCCAGGTTTaGAAGCCAAGCCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLTNSQV*KPSLSE
Trigger: CTCAGAGAGGCTTGGCTTCCAAACCTGGGAGTTTGT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGGTCATCTTTCTGATCTaGCTTCCACAAAAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: APGWSYITFYDLALEITWVIFLI*LPQKAV
Trigger: CACTGCCTTTTGTGGAAGCCAGATCAGAAAGATGAC...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTCATGATGGCTGTTGGTaGCATAGGTTTCTACCACTG +
Preference number: 2 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPHDGCW*HRFLPL
Trigger: CAGTGGTAGAAACCTATGCCACCAACAGCCATCATG...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 90 bp GCAGTGGAACAATTACCTAACAGTGCACCAAGTAATTTGTTAAAGTaGAAAACAGTAAGGGCGTTCATGTGCGCCAAGGTATTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: AVEQLPNSAPSNLLK*KTVRAFMCAKVFWA
Trigger: AGCCCAGAATACCTTGGCGCACATGAACGCCCTTACTGTTTTCAACTTTAACAAATTACTTGGTGCACTGTTAGGTAATTGTTCCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp AGACTTAACTGTCGAAACACCGTTCCACATGACAGAAATCAACACTaGTCTGTTTACATTAACCGAGCAGAGCTTAGTCACCCATCACTG +
Preference number: 2 (lower is better)
Translates to: RLNCRNTVPHDRNQH*SVYINRAELSHPSL
Trigger: CAGTGATGGGTGACTAAGCTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGTGTTTCGACAGTTAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCTGGGAGCAAGCAGCTaGAATTCTTGGCTAAGTGTA +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSLGASS*NSWLSV
Trigger: TACACTTAGCCAAGAATTTCAGCTGCTTGCTCCCAG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTGTTGCCAAGTGTTTaGGATTTTCCACCCTTTTTC +
Preference number: 2 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLLPSV*DFPPFF
Trigger: GAAAAAGGGTGGAAAATCTCAAACACTTGGCAACAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTACACAGTCATCTTTCTaGTCTGGCTTCCACAAAAGG +
Preference number: 2 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPTQSSF*SGFHKR
Trigger: CCTTTTGTGGAAGCCAGATCAGAAAGATGACTGTGT...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGAGAGGAAATTCTGTATaGAGGGCAAACATGTTACAA +
Preference number: 2 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLRGNSV*RANMLQ
Trigger: TTGTAACATGTTTGCCCTGCATACAGAATTTCCTCT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCATACCACGTTTTGTCTaGGAGCAAGCAGCTGAAATT +
Preference number: 2 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFIPRFV*EQAAEI
Trigger: AATTTCAGCTGCTTGCTCCCAGACAAAACGTGGTAT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGACAACACGCAGTTATTaGTCGCAGAGGTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAETTRSY*SQRFLL
Trigger: GAGAAGAAACCTCTGCGACCAATAACTGCGTGTTGT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGACATTTCACCAGGGTTaGACGATCTCACACATGAGT +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAETFHQG*TISHMS
Trigger: ACTCATGTGTGAGATCGTCCAACCCTGGTGAAATGT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCATTCGGCAACTAGGGTaGTGTAAACACCTCGGATCT +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSIRQLG*CKHLGS
Trigger: AGATCCGAGGTGTTTACACCACCCTAGTTGCCGAAT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGCCTTTTCTAGCCAATaGGTAGAGAACAAACTCCCA +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEAFSSQ*VENKLP
Trigger: TGGGAGTTTGTTCTCTACCCATTGGCTAGAAAAGGC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAAGACGAACAGGCAGTaGCTTCTCTTTTCACAGGGA +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSKTNRQ*LLFSQG
Trigger: TCCCTGTGAAAAGAGAAGCCACTGCCTGTTCGTCTT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTACCCCCATTCCAGTTaGCGGCTTTTTAAGTACTTT +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEYPHSS*RLFKYF
Trigger: AAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGGATACCACTTGTGTTaGAAACCACAGATCCCAAGT +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSGYHLC*KPQIPS
Trigger: ACTTGGGATCTGTGGTTTGCAACACAAGTGGTATCC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGTTCTGTGGATCGTCTaGACAATGATGTACACAGAG +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLVLWIV*TMMYTE
Trigger: CTCTGTGTACATCATTGTCCAGACGATCCACAGAAC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTACAACACGCAGTTATTaGTCGCAGAGGTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLTTRSY*SQRFLL
Trigger: GAGAAGAAACCTCTGCGACCAATAACTGCGTGTTGT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCATAAATATCAACCATaGGCACCCGTTGAAAACTGT +
Preference number: 2 (lower is better)
Translates to: HRRHLLSAKATESSHKVYHKYQP*APVENC
Trigger: ACAGTTTTCAACGGGTGCCCATGGTTGATATTTATG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCAAGTTTTCAAGCCTTaGTTGCGGCTACTGTATAGT +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEQVFKP*LRLLYS
Trigger: ACTATACAGTAGCCGCAACCAAGGCTTGAAAACTTG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGTATTCCCTTCTTGGTaGAGGCCTACTCTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSVFPSW*RPTLEE
Trigger: TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATAC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCCTCCACAGGATTCTaGGAAAAGAAACTAAAACGA +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSASTGF*EKKLKR
Trigger: TCGTTTTAGTTTCTTTTCTCAGAATCCTGTGGAGGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAAAACTACTAAACCATaGAGACATAGAAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFKTTKP*RHRRHL
Trigger: CAGATGCCTTCTATGTCTTCATGGTTTAGTAGTTTT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGAGGAGGAAAGGAGATaGTCAAATTTGTTTGCCTGT +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLEEERR*SNLFAC
Trigger: ACAGGCAAACAAATTTGATCATCTCCTTTCCTCCTC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp TTGCATTTCCTGGTAAAAGTGCTAATGGCACTAAGAAGCCAATGTTaGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTT +
Preference number: 2 (lower is better)
Translates to: LHFLVKVLMALRSQC*YHSTLTTCFRHDSL
Trigger: AAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACATTGGCTTCTTAGTGCCATTAGCACTTTTACCAGGAAATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCACAAAAGTCAGTCTaGAATGTCACATCTCTAGAT +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSAQKSV*NVTSLD
Trigger: ATCTAGAGATGTGACATTTCAGACTGACTTTTGTGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAAAATAAGCAGAAAATaGTGTGGGTGGAAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLKISRK*CGWKVL
Trigger: GAGGACTTTCCACCCACATCATTTTCTGCTTATTTT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTCAGATCAACGGAGATaGATAATTGTGCACAAATAC +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAESDQRR*IIVHKY
Trigger: GTATTTGTGCACAATTATTCATCTCCGTTGATCTGA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAGAGGAAATTCTGTATaGAGGGCAAACATGTTACAA +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAERGNSV*RANMLQ
Trigger: TTGTAACATGTTTGCCCTGCATACAGAATTTCCTCT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAAGCAGGTATTAGTTTaGTCTGAAAGAGGTGGTAAT +
Preference number: 2 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEKQVLV*SERGGN
Trigger: ATTACCACCTCTTTCAGACCAAACTAATACCTGCTT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAGTTTAACAATGACTTaGATTTTCCCTCAGCCATGC +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSSLTMT*IFPQPC
Trigger: GCATGGCTGAGGGAAAATCCAAGTCATTGTTAAACT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTATGCATGTATGGTGTTaGGCTATTAAGGTGAAATGT +
Preference number: 2 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLMHVWC*AIKVKC
Trigger: ACATTTCACCTTAATAGCTCAACACCATACATGCAT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCATGCATGTATGGTGTTaGGCTATTAAGGTGAAATGT +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSMHVWC*AIKVKC
Trigger: ACATTTCACCTTAATAGCTCAACACCATACATGCAT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 90 bp CAGCCAAAGCCTAATTTGATGGCTCAGTGGACACACAAAGCTAATTaGATAGCTCACGCCAAACAAAGAGACATTTTTATCACAATTTAT +
Preference number: 2 (lower is better)
Translates to: QPKPNLMAQWTHKAN*IAHAKQRDIFITIY
Trigger: ATAAATTGTGATAAAAATGTCTCTTTGTTTGGCGTGAGCTATCAAATTAGCTTTGTGTGTCCACTGAGCCATCAAATTAGGCTTTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAATTTGTTTGCCTGTTaGCAAGTGTTTGAGATTTTC +
Preference number: 2 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSNLFAC*QVFEIF
Trigger: GAAAATCTCAAACACTTGGCAACAGGCAAACAAATT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTTGTAAGAAAGACATGTaGGATGGAAGATACTGTTGC +
Preference number: 2 (lower is better)
Translates to: YITFYDLALEITWHHFHSCKKDM*DGRYCC
Trigger: GCAACAGTATCTTCCATCCCACATGTCTTTCTTACA...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 72 bp TCTGCTTACGTGATTCCCCGCCTCCACAGGAGGAACTaGGGCGGGAGCGCCACGGACACCAGGTCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: SAYVIPRLHRRN*GGSATDTRSWK
Trigger: CTTCCAGGACCTGGTGTCCGTGGCGCTCCCGCCTCAGTTCCTCCTGTGGAGGCGGGGAATCACGTAAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp CTTGGCTCCTGTTTCCAGCCATCGGCTCTGCTTACGTaGTTCCCCGCCTCCACAGGAGGAACTGAGGCGGGA +
Preference number: 3 (lower is better)
Translates to: LGSCFQPSALLT*FPASTGGTEAG
Trigger: TCCCGCCTCAGTTCCTCCTGTGGAGGCGGGGAATCACGTAAGCAGAGCCGATGGCTGGAAACAGGAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp AGAGGGGGCTTGGCTCCTGTTTCCAGCCATCGGCTCTaGTTACGTGATTCCCCGCCTCCACAGGAGGAACTG +
Preference number: 3 (lower is better)
Translates to: RGGLAPVSSHRL*LRDSPPPQEEL
Trigger: CAGTTCCTCCTGTGGAGGCGGGGAATCACGTAAGCAGAGCCGATGGCTGGAAACAGGAGCCAAGCCCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTCTTAGTGCCGCACATTaGCTGCCACATCCCGTGCCG +
Preference number: 3 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPLSAAH*LPHPVP
Trigger: CGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAG...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTGTGTATACCACGTTTaGTCTGGGAGCAAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTCVYHV*SGSKQL
Trigger: CAGCTGCTTGCTCCCAGACAAAACGTGGTATACACA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATCTGTCAGAGGGGGCTaGGCTCCTGTTTCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGSVRGG*APVSSH
Trigger: ATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAGA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTaGCACATCCCGTGCCGAGCTCCCCCGATCCTTCAA +
Preference number: 3 (lower is better)
Translates to: KAVTLSLVPHIC*HIPCRAPPILQ
Trigger: TTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 72 bp CAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTaGTGCCACATCCCGTGCCGAGCTCCCCCGATCCTT +
Preference number: 3 (lower is better)
Translates to: QKAVTLSLVPHI*CHIPCRAPPIL
Trigger: AAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 72 bp ATAGGCCTGTGGCTGGCACCGACCAAGCTGTCAGGGTaGTACGAAAAGGAGAGGAAACAGGAGTGCTGGACA +
Preference number: 3 (lower is better)
Translates to: IGLWLAPTKLSG*YEKERKQECWT
Trigger: TGTCCAGCACTCCTGTTTCCTCTCCTTTTCGTACCACCCTGACAGCTTGGTCGGTGCCAGCCACAGGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp CCCTTGACTCTCGGCAGGTATGACCCTGGGTGCCTGTaGGCTAGGAGAGGAAATTCTGTATGCAGGGCAAAC +
Preference number: 3 (lower is better)
Translates to: PLTLGRYDPGCL*ARRGNSVCRAN
Trigger: GTTTGCCCTGCATACAGAATTTCCTCTCCTAGCTCACAGGCACCCAGGGTCATACCTGCCGAGAGTCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp AGGGGAGGAGATGGCACTGCACTTCAGGTCTCCAAATaGAGTGTGCTAGGAATGGCCTCGCTGACAGTTGGA +
Preference number: 3 (lower is better)
Translates to: RGGDGTALQVSK*SVLGMASLTVG
Trigger: TCCAACTGTCAGCGAGGCCATTCCTAGCACACTGCATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp TTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTaGCGAGCTCCCCCGATCCTTCAATCATCTGTGGAT +
Preference number: 3 (lower is better)
Translates to: LSLVPHICCHIP*RAPPILQSSVD
Trigger: ATCCACAGATGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGTTTTCAAGCCTTGGTaGCGGCTACTGTATAGTCAG +
Preference number: 3 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAVFKPW*RLLYSQ
Trigger: CTGACTATACAGTAGCCGCAACCAAGGCTTGAAAAC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTCTTAGTGCCGCACATTaGCTGCCACATCCCGTGCCG +
Preference number: 3 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPLSAAH*LPHPVP
Trigger: CGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAG...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 72 bp ACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTaGGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTC +
Preference number: 3 (lower is better)
Translates to: TAAASTGIVVST*GARVGSWNPYL
Trigger: GAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 72 bp TCTGGACTTCCTTACAACATGGCCACTGGGTTGCCATaGGTGAGCATCTCCAGACAGCACCAGGTTGGAGCT +
Preference number: 3 (lower is better)
Translates to: SGLPYNMATGLP*VSISRQHQVGA
Trigger: AGCTCCAACCTGGTGCTGTCTGGAGATGCTCACTCATGGCAACCCAGTGGCCATGTTGTAAGGAAGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 72 bp GTGGGTGGAAAGTCCTCCTTAGGAGTTCACAGGGACTaGTCGTATTTAGCAGGGCCCTCTAAATGGGGACTG +
Preference number: 3 (lower is better)
Translates to: VGGKSSLGVHRD*SYLAGPSKWGL
Trigger: CAGTCCCCATTTAGAGGGCCCTGCTAAATACGAGCAGTCCCTGTGAACTCCTAAGGAGGACTTTCCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAGACGTATTCCCTTCTaGGTGGAGGCCTACTCTAGA +
Preference number: 3 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGRRIPF*VEAYSR
Trigger: TCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp AAAGATGTTTTGAACGGGGATCCAGAATTTCGCCCTTaGCTCTCGGCAGGTATGACCCTGGGTGCCTGTGAG +
Preference number: 3 (lower is better)
Translates to: KDVLNGDPEFRP*LSAGMTLGACE
Trigger: CTCACAGGCACCCAGGGTCATACCTGCCGAGAGTCAAGGGCGAAATTCTGGATCCCCGTTCAAAACATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp CATCACTGGATTCGACCTCGAGCAGACAGCTCTACCTaGCTCAGGGTCGGAAGAGTGATACAAGGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: HHWIRPRADSST*LRVGRVIQGVQ
Trigger: TTGCACACCTTGTATCACTCTTCCGACCCTGAGTCAGGTAGAGCTGTCTGCTCGAGGTCGAATCCAGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp CCTGGAATCCTTATCTCAACTGAGCTCCTTCTCACCTaGGCAACAGGGCTCTCTATCCACCACTCACAACAC +
Preference number: 3 (lower is better)
Translates to: PGILISTELLLT*ATGLSIHHSQH
Trigger: GTGTTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGATTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 72 bp GAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTaGCATAGGTTTCTACCACTGGCAAGACCGATGCTA +
Preference number: 3 (lower is better)
Translates to: ERLLGPFHDGCW*HRFLPLARPML
Trigger: TAGCATCGGTCTTGCCAGTGGTAGAAACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAACATTTCACCAGGGTaGGACGATCTCACACATGAG +
Preference number: 3 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGNISPG*DDLTHE
Trigger: CTCATGTGTGAGATCGTCCAACCCTGGTGAAATGTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGGGGGTTTCACCATGTaGGCCAGGCTGGCCTCAAAC +
Preference number: 3 (lower is better)
Translates to: LSHLSLAMLSITPAATLRGGFTM*ARLASN
Trigger: GTTTGAGGCCAGCCTGGCCAACATGGTGAAACCCCC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGCAACAGCATTGGCTaGACTCTAAAGGAGGACCAG +
Preference number: 3 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSNSIG*TLKEDQ
Trigger: CTGGTCCTCCTTTAGAGTCAAGCCAATGCTGTTGCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp GGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTaGGGGATACCACTTGTGTTGCAAACCACAGATCCC +
Preference number: 3 (lower is better)
Translates to: GRKSRHSPFSGV*GIPLVLQTTDP
Trigger: GGGATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp CAACATATGAAGCTCCTAATGCCCATCACTAACAAGTaGCACGGAGGCAGGGGAAACAGAGAGTGCCGCTAC +
Preference number: 3 (lower is better)
Translates to: QHMKLLMPITNK*HGGRGNRECRY
Trigger: GTAGCGGCACTCTCTGTTTCCCCTGCCTCCGTGTCACTTGTTAGTGATGGGCATTAGGAGCTTCATATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp ATCTGCAGCCTCATCTCTAGCCTAGGTGAGAAGACTTaGAGGCTAGCAGCTGGAATCATGTGGGGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: ICSLISSLGEKT*RLAAGIMWGCL
Trigger: AAGACAGCCCCACATGATTCCAGCTGCTAGCCTTCAAGTCTTCTCACCTAGGCTAGAGATGAGGCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 72 bp GCAGGGCAAACATGTTACAAGGGGAGGAGATGGCACTaGACTTCAGGTCTCCAAATGCAGTGTGCTAGGAAT +
Preference number: 3 (lower is better)
Translates to: AGQTCYKGRRWH*TSGLQMQCARN
Trigger: ATTCCTAGCACACTGCATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTAACATGTTTGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp AACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTaGCTCCTGGAATCCTTATCTCAACTGAGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: NRYCCLYLRGSS*LLESLSQLSSF
Trigger: GAAGGAGCTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAATCTGTCAGAGGGGGCTaGGCTCCTGTTTCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEESVRGG*APVSSH
Trigger: ATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAGA...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGTCCTACCTGCCGTTTaGGTCACAGTGACTGCCACG +
Preference number: 3 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFVLPAV*VTVTAT
Trigger: CGTGGCAGTCACTGTGACCAAAACGGCAGGTAGGAC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAAAGGAGCAATGGGGTaGAATGTACCAAGTATGTTG +
Preference number: 3 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGKGAMG*NVPSML
Trigger: CAACATACTTGGTACATTCAACCCCATTGCTCCTTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATGGAAGTATCATGAGTaGGGGTCTTGGGGAAGCGGC +
Preference number: 3 (lower is better)
Translates to: LSHLSLAMLSITPAATLRWKYHE*GSWGSG
Trigger: GCCGCTTCCCCAAGACCCCAACTCATGATACTTCCA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGAGGGAGAAGGCACTTaGCCATGGGAGCACATCTGT +
Preference number: 3 (lower is better)
Translates to: LSHLSLAMLSITPAATLREGEGT*PWEHIC
Trigger: ACAGATGTGCTCCCATGGCAAAGTGCCTTCTCCCTC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp CTCGAGCCACAGAGGTTCTGTGGATCGTCTGGACAATaGTGTACACAGAGCATACGTACAGGACGTATAGGT +
Preference number: 3 (lower is better)
Translates to: LEPQRFCGSSGQ*CTQSIRTGRIG
Trigger: ACCTATACGTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCTGTGGCTCGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp AGGCACACCAGGCTGAACAAGGTGAGAGTTCTGACATaGATCATGGAATGCACAGGCTCCAAGAGCATCTAT +
Preference number: 3 (lower is better)
Translates to: RHTRLNKVRVLT*IMECTGSKSIY
Trigger: ATAGATGCTCTTGGAGCCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp CTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTaGCTCTCTCATCAGACTGTGAGCTCAGTGAGGGAA +
Preference number: 3 (lower is better)
Translates to: LGSTPLTSTMPI*LSHQTVSSVRE
Trigger: TTCCCTCACTGAGCTCACAGTCTGATGAGAGAGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 72 bp GTAGTTTCTCGAGCCACAGAGGTTCTGTGGATCGTCTaGACAATGATGTACACAGAGCATACGTACAGGACG +
Preference number: 3 (lower is better)
Translates to: VVSRATEVLWIV*TMMYTEHTYRT
Trigger: CGTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCTGTGGCTCGAGAAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp AGCCTGGAAAACACGGTGGAGCGTCACATCATTAGGTaGGTGATGGGATTAGTACCGAAAAACAGACCGACA +
Preference number: 3 (lower is better)
Translates to: SLENTVERHIIR*VMGLVPKNRPT
Trigger: TGTCGGTCTGTTTTTCGGTACTAATCCCATCACCCACCTAATGATGTGACGCTCCACCGTGTTTTCCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTCTGGGGCTGATGGATaGTTGATTGGTGAATCCCTG +
Preference number: 3 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLSGADG*LIGESL
Trigger: CAGGGATTCACCAATCAACAATCCATCAGCCCCAGA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGCAAGAATGGTCACATaGACAAAGGTCGAAATGAAA +
Preference number: 3 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGARMVT*TKVEMK
Trigger: TTTCATTTCGACCTTTGTCAATGTGACCATTCTTGC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTGGAAGTATCATGAGTaGGGGTCTTGGGGAAGCGGC +
Preference number: 3 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFWKYHE*GSWGSG
Trigger: GCCGCTTCCCCAAGACCCCAACTCATGATACTTCCA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGGAACTGGTGTGGGTaGAGAGGTAAAATGCTTACA +
Preference number: 3 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRRNWCG*RGKMLT
Trigger: TGTAAGCATTTTACCTCTCAACCCACACCAGTTCCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp GGCCTCCAGCAGCCAAAGCCTAATTTGATGGCTCAGTaGACACACAAAGCTAATTTGATAGCTCACGCCAAA +
Preference number: 3 (lower is better)
Translates to: GLQQPKPNLMAQ*THKANLIAHAK
Trigger: TTTGGCGTGAGCTATCAAATTAGCTTTGTGTGTCCACTGAGCCATCAAATTAGGCTTTGGCTGCTGGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACTGAACTATAAAGCATaGTGTATACCACGTTTTGTC +
Preference number: 3 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGLNYKA*CIPRFV
Trigger: GACAAAACGTGGTATACACAATGCTTTATAGTTCAG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACTAAAACGACCCTCTTaGGGAATATACTTACTAGAT +
Preference number: 3 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGLKRPS*GIYLLD
Trigger: ATCTAGTAAGTATATTCCCAAAGAGGGTCGTTTTAG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAACCTCAACCGGTATTGTaGTCTCTACCTGAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQPQPVL*SLPEGL
Trigger: GAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGG...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATCAATCTGCCACACACTaGGTCAGATGTATTCCCCAA +
Preference number: 3 (lower is better)
Translates to: SLISLVADDRCQLEQLPYQSATH*VRCIPQ
Trigger: TTGGGGAATACATCTGACCAAGTGTGTGGCAGATTG...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGTTTTCAAGCCTTGGTaGCGGCTACTGTATAGTCAG +
Preference number: 3 (lower is better)
Translates to: LSHLSLAMLSITPAATLRVFKPW*RLLYSQ
Trigger: CTGACTATACAGTAGCCGCAACCAAGGCTTGAAAAC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACTGTCCTATCAGATTTaGGTGGTGGTGGCAGAGAAT +
Preference number: 3 (lower is better)
Translates to: LSHLSLAMLSITPAATLRLSYQI*VVVAEN
Trigger: ATTCTCTGCCACCACCACCAAAATCTGATAGGACAG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp ATCAAACTGAATAGAAATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATCAGCCTCAACCGGTATaGTTGTCTCTACCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: IKLNRNEEPERLLGPFHDQPQPV*LSLPEG
Trigger: CCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTG...ATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATTTCTATTCAGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 72 bp TGCCAACATTTCACCAGGGTTGGACGATCTCACACATaGGTTTCTGGCACTTTTAGGAGGGATTTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: CQHFTRVGRSHT*VSGTFRRDFLK
Trigger: CTTGAGGAAATCCCTCCTAAAAGTGCCAGAAACTCATGTGTGAGATCGTCCAACCCTGGTGAAATGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp GTCCCTTTTCAGGAGTCTGAGGGATACCACTTGTGTTaGAAACCACAGATCCCAAGTATTAGACGTATTCCC +
Preference number: 3 (lower is better)
Translates to: VPFQESEGYHLC*KPQIPSIRRIP
Trigger: GGGAATACGTCTAATACTTGGGATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp GCTGTGAGTTGCTGTAGGTGCCTGAATCTTCTACTCTaGGCAACAACCAGCTTCATTCAAAGTCTGGAACTT +
Preference number: 3 (lower is better)
Translates to: AVSCCRCLNLLL*ATTSFIQSLEL
Trigger: AAGTTCCAGACTTTGAATGAAGCTGGTTGTTGCCCAGAGTAGAAGATTCAGGCACCTACAGCAACTCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAGTGTAATCCAGCTATaGGTAGTTTCTCGAGCCACA +
Preference number: 3 (lower is better)
Translates to: LSHLSLAMLSITPAATLRSVIQL*VVSRAT
Trigger: TGTGGCTCGAGAAACTACCAATAGCTGGATTACACT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGACAACACGCAGTTATaGGTCGCAGAGGTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEDNTQL*VAEVSS
Trigger: AGAAGAAACCTCTGCGACCAATAACTGCGTGTTGTC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTCCACCCTTTTTCTTTaGTGTGCAACATTCTCTTTA +
Preference number: 3 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSTLFL*CATFSL
Trigger: TAAAGAGAATGTTGCACACAAAAGAAAAAGGGTGGA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGACAGAAATCAACACTaGTCTGTTTACATTAACCGA +
Preference number: 3 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRDRNQH*SVYINR
Trigger: TCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCAAAAGGCAGTGACTTaGTCCTTAGTGCCGCACATT +
Preference number: 3 (lower is better)
Translates to: APGWSYITFYDLALEITWQKAVT*SLVPHI
Trigger: AATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTG...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 72 bp CCAGACAGCACCAGGTTGGAGCTATATCACCTTTTATaGCTTGGCTTTGGAAATCACATGGCATCACTTCCA +
Preference number: 3 (lower is better)
Translates to: PDSTRLELYHLL*LGFGNHMASLP
Trigger: TGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGCTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR GCA 72 bp TATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATaGCAACATTTCACCAGGGTTGGACGATCTCACACA +
Preference number: 3 (lower is better)
Translates to: YFRNWLLYCGVR*QHFTRVGRSHT
Trigger: TGTGTGAGATCGTCCAACCCTGGTGAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp CAGGTCACGCAAAGGAGGGAGGCTCTTTCAAGGTCTTaGTCCAACTTCACGTTTTCACATTATTTCAGAGTA +
Preference number: 3 (lower is better)
Translates to: QVTQRREALSRS*SNFTFSHYFRV
Trigger: TACTCTGAAATAATGTGAAAACGTGAAGTTGGAGCAAGACCTTGAAAGAGCCTCCCTCCTTTGCGTGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp CTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATaGACAGGCTCCAAGAGCATCTATATGAAGAGTAGC +
Preference number: 3 (lower is better)
Translates to: LNKVRVLTCIME*TGSKSIYMKSS
Trigger: GCTACTCTTCATATAGATGCTCTTGGAGCCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp ATTAAGGTGAAATGTGTGGCCTGGGGCCAAAGGAACTaGTGTGGGTTGAGAGGTAAAATGCTTACATCTAAC +
Preference number: 3 (lower is better)
Translates to: IKVKCVAWGQRN*CGLRGKMLTSN
Trigger: GTTAGATGTAAGCATTTTACCTCTCAACCCACACCAGTTCCTTTGGCCCCAGGCCACACATTTCACCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp CAAATGCAGTGTGCTAGGAATGGCCTCGCTGACAGTTaGAATCACGGATACATTAATTACAGCGAAGGCAAA +
Preference number: 3 (lower is better)
Translates to: QMQCARNGLADS*NHGYINYSEGK
Trigger: TTTGCCTTCGCTGTAATTAATGTATCCGTGATTCCAACTGTCAGCGAGGCCATTCCTAGCACACTGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTCTGGGGCTGATGGATaGTTGATTGGTGAATCCCTG +
Preference number: 3 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSSGADG*LIGESL
Trigger: CAGGGATTCACCAATCAACAATCCATCAGCCCCAGA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGGACCCAGCAGTCTCTaGTGTTTTGAAGGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEGPSSL*CFEGFL
Trigger: AAGAAAACCTTCAAAACACAAGAGACTGCTGGGTCC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAACCATGGGCACCCGTaGAAAACTGTTAAGAAAGCC +
Preference number: 3 (lower is better)
Translates to: TVPHDRNQHLSVYINRAENHGHP*KTVKKA
Trigger: GGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGTT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAAGGAACTGGTGTGGGTaGAGAGGTAAAATGCTTACA +
Preference number: 3 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEERNWCG*RGKMLT
Trigger: TGTAAGCATTTTACCTCTCAACCCACACCAGTTCCT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp TTTGTACCATTCTACTTTAACGACGTGTTTCCGACATaGTTCCCTTTACTCCTGAGGTTAAGGCACACCAGG +
Preference number: 3 (lower is better)
Translates to: FVPFYFNDVFPT*FPLLLRLRHTR
Trigger: CCTGGTGTGCCTTAACCTCAGGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp CCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTaGATAGGAGGAGCATCAAAGTCACAGTGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: PKFGEKEHRSHY*IGGASKSQCKK
Trigger: TTTCTTACACTGTGACTTTGATGCTCCTCCTATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CCA 72 bp CACAGATCCCAAGTATTAGACGTATTCCCTTCTTGGTaGAGGCCTACTCTAGAAGAATCAAAAACCGATGAC +
Preference number: 3 (lower is better)
Translates to: HRSQVLDVFPSW*RPTLEESKTDD
Trigger: GTCATCGGTTTTTGATTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp GGATATACTAATTTATGGACGGCCTTTTCTAGCCAATaGGTAGAGAACAAACTCCCAGGTTTGGAAGCCAAG +
Preference number: 3 (lower is better)
Translates to: GYTNLWTAFSSQ*VENKLPGLEAK
Trigger: CTTGGCTTCCAAACCTGGGAGTTTGTTCTCTACCCATTGGCTAGAAAAGGCCGTCCATAAATTAGTATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAGTGTAATCCAGCTATaGGTAGTTTCTCGAGCCACA +
Preference number: 3 (lower is better)
Translates to: TVPHDRNQHLSVYINRAESVIQL*VVSRAT
Trigger: TGTGGCTCGAGAAACTACCAATAGCTGGATTACACT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGACAACACGCAGTTATaGGTCGCAGAGGTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLDNTQL*VAEVSS
Trigger: AGAAGAAACCTCTGCGACCAATAACTGCGTGTTGTC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAACCATGGGCACCCGTaGAAAACTGTTAAGAAAGCC +
Preference number: 3 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLNHGHP*KTVKKA
Trigger: GGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGTT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACCTGTTGCCAAGTGTTaGAGATTTTCCACCCTTTTT +
Preference number: 3 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEPVAKC*RFSTLF
Trigger: AAAAAGGGTGGAAAATCTCAAACACTTGGCAACAGG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGAAAACAAAGATGTTTaGAACGGGGATCCAGAATTT +
Preference number: 3 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLENKDV*NGDPEF
Trigger: AAATTCTGGATCCCCGTTCAAAACATCTTTGTTTTC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTCTGAGGGATACCACTaGTGTTGCAAACCACAGATC +
Preference number: 3 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLSEGYH*CCKPQI
Trigger: GATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp AACCACAGATCCCAAGTATTAGACGTATTCCCTTCTTaGTGGAGGCCTACTCTAGAAGAATCAAAAACCGAT +
Preference number: 3 (lower is better)
Translates to: NHRSQVLDVFPS*WRPTLEESKTD
Trigger: ATCGGTTTTTGATTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCTGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp CAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTaGAAATCACATGGCATCACTTCCATAGTCACAGAC +
Preference number: 3 (lower is better)
Translates to: QVGAISPFMTWL*KSHGITSIVTD
Trigger: GTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR TCA 72 bp ATTGTGTATACCACGTTTTGTCTGGGAGCAAGCAGCTaGAATTCTTGGCTAAGTGTAATCCAGCTATTGGTA +
Preference number: 3 (lower is better)
Translates to: IVYTTFCLGASS*NSWLSVIQLLV
Trigger: TACCAATAGCTGGATTACACTTAGCCAAGAATTTCAGCTGCTTGCTCCCAGACAAAACGTGGTATACACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp ATGGCTGGTTTTTATTTCTCTACCCATTGGCCTTGGTaGCATCATGACATTCCCCTGAGTTTGGTTAATGAA +
Preference number: 3 (lower is better)
Translates to: MAGFYFSTHWPW*HHDIPLSLVNE
Trigger: TTCATTAACCAAACTCAGGGGAATGTCATGATGTCACCAAGGCCAATGGGTAGAGAAATAAAAACCAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp GCAAAACTACTAAACCATGAAGACATAGAAGGCATCTaGTCAGCGCGAAAGCTACAGAATCTTCTCATAAAG +
Preference number: 3 (lower is better)
Translates to: AKLLNHEDIEGI*SARKLQNLLIK
Trigger: CTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATGTCTTCATGGTTTAGTAGTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp ATGAATAATTGTGCACAAATACACGAGCAACAGCATTaGCTTGACTCTAAAGGAGGACCAGAATGTGTCTCT +
Preference number: 3 (lower is better)
Translates to: MNNCAQIHEQQH*LDSKGGPECVS
Trigger: AGAGACACATTCTGGTCCTCCTTTAGAGTCAAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCTGAACTATAAAGCATaGTGTATACCACGTTTTGTC +
Preference number: 3 (lower is better)
Translates to: HRRHLLSAKATESSHKVYLNYKA*CIPRFV
Trigger: GACAAAACGTGGTATACACAATGCTTTATAGTTCAG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACTAAAACGACCCTCTTaGGGAATATACTTACTAGAT +
Preference number: 3 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEELKRPS*GIYLLD
Trigger: ATCTAGTAAGTATATTCCCAAAGAGGGTCGTTTTAG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAATCCAAAGTTGGTATTTaGAAGTTCCACATTACTCTG +
Preference number: 3 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEESKVGI*KFHITL
Trigger: CAGAGTAATGTGGAACTTCAAAATACCAACTTTGGA...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAAAGGAGCAATGGGGTaGAATGTACCAAGTATGTTG +
Preference number: 3 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSKGAMG*NVPSML
Trigger: CAACATACTTGGTACATTCAACCCCATTGCTCCTTT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGATGATCAAATTTGTTaGCCTGTTGCCAAGTGTTTG +
Preference number: 3 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEDDQIC*PVAKCL
Trigger: CAAACACTTGGCAACAGGCAAACAAATTTGATCATC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCAATCTGCCACACACTaGGTCAGATGTATTCCCCAA +
Preference number: 3 (lower is better)
Translates to: YITFYDLALEITWHHFHSQSATH*VRCIPQ
Trigger: TTGGGGAATACATCTGACCAAGTGTGTGGCAGATTG...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGGGATGGAAGATACTGTaGCAGCTATTTTTGCAAAAT +
Preference number: 3 (lower is better)
Translates to: APGWSYITFYDLALEITWGWKIL*QLFLQN
Trigger: ATTTTGCAAAAATAGCTGCAACAGTATCTTCCATCC...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCAAGAATGGTCACATaGACAAAGGTCGAAATGAAA +
Preference number: 3 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSARMVT*TKVEMK
Trigger: TTTCATTTCGACCTTTGTCAATGTGACCATTCTTGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR TCA 72 bp AAAGGAGCAATGGGGTTGAATGTACCAAGTATGTTGTaGGCCACTGATCCTAATAGCAGCAAAACTACTAAA +
Preference number: 3 (lower is better)
Translates to: KGAMGLNVPSML*ATDPNSSKTTK
Trigger: TTTAGTAGTTTTGCTGCTATTAGGATCAGTGGCTCACAACATACTTGGTACATTCAACCCCATTGCTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTCCACCCTTTTTCTTTaGTGTGCAACATTCTCTTTA +
Preference number: 3 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLSTLFL*CATFSL
Trigger: TAAAGAGAATGTTGCACACAAAAGAAAAAGGGTGGA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCACTAAGGAAAGACCCTaGAGTCAGAGATTTTTGAAT +
Preference number: 3 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSTKERP*SQRFLN
Trigger: ATTCAAAAATCTCTGACTCAAGGGTCTTTCCTTAGT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR GCA 72 bp AATTTGTTAAAGTTGAAAACAGTAAGGGCGTTCATGTaGGCCAAGGTATTCTGGGCTGAAAACAGCAATTTT +
Preference number: 3 (lower is better)
Translates to: NLLKLKTVRAFM*AKVFWAENSNF
Trigger: AAAATTGCTGTTTTCAGCCCAGAATACCTTGGCGCACATGAACGCCCTTACTGTTTTCAACTTTAACAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CCA 72 bp CACAGATTTGCTTTTGTTTCGACAGTTTCTAAGCAGTaGAACAATTACCTAACAGTGCACCAAGTAATTTGT +
Preference number: 3 (lower is better)
Translates to: HRFAFVSTVSKQ*NNYLTVHQVIC
Trigger: ACAAATTACTTGGTGCACTGTTAGGTAATTGTTCCACTGCTTAGAAACTGTCGAAACAAAAGCAAATCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGCGGCCAGCGGCTCTaGGTGGTGGTACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGGQRL*VVVQHG
Trigger: GCCATGCTGTACCACCACGCAGAGCCGCTGGCCGCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGCGGCGGAGATCCTCTaGCACCGCTGCCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPAAEIL*HRCPAA
Trigger: AGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGC...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGCCTGCCTCTGGGCTaGGGCTCAGAACTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGLPLG*GSELGA
Trigger: TGCCCCTAGTTCTGAGCCCCAGCCCAGAGGCAGGCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGGCGGCCAGCGGCTCTaGGTGGTGGTACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRGGQRL*VVVQHG
Trigger: GCCATGCTGTACCACCACGCAGAGCCGCTGGCCGCC...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATCCGCTGCCCGGCAGCTaGACAAATAGGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDPLPGS*TNRLGA
Trigger: CGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGG...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCCCGCTGCCCGGCAGCTaGACAAATAGGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGPLPGS*TNRLGA
Trigger: CGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGG...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATACTCTCCATTCACCTaGGGGGCCTTCAGTCCGCTC +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSYSPFT*GAFSPL
Trigger: GAGCGGACTGAAGGCCCCGCAGGTGAATGGAGAGTA...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACAGCGACTTCAGCCGCTaGCGCAGCCGCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHSDFSR*RSRSTA
Trigger: CGCCGTGCTGCGGCTGCGGCAGCGGCTGAAGTCGCT...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGAGCGACTTCAGCCGCTaGCGCAGCCGCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTESDFSR*RSRSTA
Trigger: CGCCGTGCTGCGGCTGCGGCAGCGGCTGAAGTCGCT...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCCAGGTTGTCCATCTaGACAGCCAGACACACGTCC +
Preference number: 4 (lower is better)
Translates to: VLSAAHLLPHPVPSSPDPSRLSI*TARHTS
Trigger: GGACGTGTGTCTGGCTGTCCAGATGGACAACCTGGA...AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTCGTGGTGGTACAGCATaGCGTTCTCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VLSAAHLLPHPVPSSPDPRGGTA*RSPAGC
Trigger: ACATCCAGCAGGAGAACGCCATGCTGTACCACCACG...AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATGCTCCTGGAGGGGCTTaGCTCCCGCAGCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYAPGGA*LPQPAA
Trigger: GGCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGC...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAGCAAAGGCGTGGTTTTaGGGACTACCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSAKAWF*GLPSSP
Trigger: TGGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGC...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCTCCACAGGAGGAACTaGGGCGGGAGCGCCACGGAC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRLHRRN*GGSATD
Trigger: GTCCGTGGCGCTCCCGCCTCAGTTCCTCCTGTGGAG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGACTCTCGGCAGGTATaGCCCTGGGTGCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGDSRQV*PWVPVS
Trigger: GCTCACAGGCACCCAGGGTCATACCTGCCGAGAGTC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGGGCGGCCAGCGGCTCTaGGTGGTGGTACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTEGGQRL*VVVQHG
Trigger: GCCATGCTGTACCACCACGCAGAGCCGCTGGCCGCC...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATA +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTILCHR*PAAEQI
Trigger: TATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGAT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATGCGGCGGAGATCCTCTaGCACCGCTGCCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHAAEIL*HRCPAA
Trigger: AGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGC...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTCAGGGCTGTCCTACCTaGCGTTTTGGTCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTQGCPT*RFGHSD
Trigger: GTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTG...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCACAGCACTCAGATGACTaGATGCCAAGGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSQHSDD*MPRDSQ
Trigger: CTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTG...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCACTTCATTGGGCTCCCTaGAGCAGGCCAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSLHWAP*SRPNPK
Trigger: CTTTGGGTTTGGCCTGCTCCAGGGAGCCCAATGAAG...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTCCAGGTTGTCCATCTaGACAGCCAGACACACGTCC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTSRLSI*TARHTS
Trigger: GGACGTGTGTCTGGCTGTCCAGATGGACAACCTGGA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTATGGCGTTCTCCTGCTaGATGTCGATGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTMAFSC*MSMSGS
Trigger: AGAGCCGCTCATCGACATCCAGCAGGAGAACGCCAT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGCCAGCGGCTCTGCGTaGTGGTACAGCATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGASGSA*WYSMAF
Trigger: GAACGCCATGCTGTACCACCACGCAGAGCCGCTGGC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAGAGCATGCCCTGGCTTaGAAGTTGAGGTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSEHALA*KLRSHP
Trigger: TGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTC...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCCTGCAGGTCGGCAAGTaGATACAGGTGGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSILQVGK*IQVDLL
Trigger: CAACAGATCCACCTGTATTCACTTGCCGACCTGCAG...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGAAGCCAAGCCTCTCTaGGGAGGCACAGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTEAKPL*GGTEKN
Trigger: GTTCTTTTCTGTGCCTCCTCAGAGAGGCTTGGCTTC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTATGATGATGGGTGCCTaGCTCAGTTACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTMMMGA*LSYLSL
Trigger: GAGGCTGAGGTAACTGAGGCAGGCACCCATCATCAT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGAGAGGAAACAGGAGTaGTGGACATGGACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAERKQE*WTWTQL
Trigger: GAGCTGGGTCCATGTCCAGCACTCCTGTTTCCTCTC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAACAGGTGTGAGCCGCTaGGGCCAACCACTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGTGVSR*GQPLSL
Trigger: GAGGGAAAGTGGTTGGCCGCAGCGGCTCACACCTGT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTCAGTATCCACCATCCTaGCCTCCAGGTTGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: VLSAAHLLPHPVPSSPDPQYPPS*PPGCLK
Trigger: TTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTG...AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGTGAAATGTGTGGCCTaGGGCCAAAGGAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTVKCVA*GQRNWC
Trigger: ACACCAGTTCCTTTGGCCCCAGGCCACACATTTCAC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTACAAGGGGAGGAGATaGCACTGCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTYKGRR*HCTSGL
Trigger: GAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGACGTGTTTCCGACATaGTTCCCTTTACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTDVFPT*FPLLLR
Trigger: CCTCAGGAGTAAAGGGAATCATGTCGGAAACACGTC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTACCCATTGGCCTTGGTaGCATCATGACATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREATHWPW*HHDIPL
Trigger: CAGGGGAATGTCATGATGTCACCAAGGCCAATGGGT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTCTTCTAAGGCTGGGCTaGTATCATCCACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VLSAAHLLPHPVPSSPDPLLRLG*YHPLPK
Trigger: CTTTGGAAGTGGATGATATCAGCCCAGCCTTAGAAG...AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGAGCATGCCCTGGCTTaGAAGTTGAGGTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAEHALA*KLRSHP
Trigger: TGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTATGGCCAAGCCCTGGTaGGATTGTCAGCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAMAKPW*DCQLIL
Trigger: CAGAATGAGCTGACAATCTCACCAGGGCTTGGCCAT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTCATGCCCACCCATTTaGTCCTTGGGTTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTSCPPI*SLGLFL
Trigger: GAGGAACAAACCCAAGGATCAAATGGGTGGGCATGA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCCTATGCGTGCTGGAATaGGAAAGCTGTCATCCACGT +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSILCVLE*ESCHPR
Trigger: ACGTGGATGACAGCTTTCTCATTCCAGCACGCATAG...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTACAGGTGGATCTGTTaGAGGAGGTATTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTYRWIC*RRYSLG
Trigger: CCCCAGAGAATACCTCCTTCAACAGATCCACCTGTA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCTGCAGGTCGGCAAGTaGATACAGGTGGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALQVGK*IQVDLL
Trigger: CAACAGATCCACCTGTATTCACTTGCCGACCTGCAG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGGCTGATGGATTGTTaGTTGGTGAATCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGLMDC*LVNPWP
Trigger: AGGCCAGGGATTCACCAATCAACAATCCATCAGCCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGTTGAGCTATTAAGGTaGAATGTGTGGCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAVELLR*NVWPGA
Trigger: GGCCCCAGGCCACACATTTCACCTTAATAGCTCAAC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTCCCTTTTCAGGAGTCTaGGGGATACCACTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTPFSGV*GIPLVL
Trigger: CAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGG...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTACTCTCCATTCACCTaGGGGGCCTTCAGTCCGCTC +
Preference number: 4 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGYSPFT*GAFSPL
Trigger: GAGCGGACTGAAGGCCCCGCAGGTGAATGGAGAGTA...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAGATCGTGATCGAGCATaGCCTGGCTTGAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSDRDRA*PGLKVE
Trigger: CTCAACTTTCAAGCCAGGGCATGCTCGATCACGATC...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTGCTGTTGCTGCTGCTaGAAAGGCGTGGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREACCCCC*KGVVLR
Trigger: CCTCAAAACCACGCCTTTGCAGCAGCAGCAACAGCA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTGCTGCTGTTGCTGCTaGTGCAAAGGCGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREACCCCC*CKGVVL
Trigger: CAAAACCACGCCTTTGCAGCAGCAGCAACAGCAGCA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGGCTGCTGCTGTTGCTaGTGCTGCAAAGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGGCCCC*CCKGVV
Trigger: AACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGATCGCTGGCAGCCTaGACATTTGAAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGSLAA*TFETLS
Trigger: GCTCAGAGTTTCAAATGTGCAGGCTGCCAGCGATCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTACCACCCACTGTAGTTaGACACCTTGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTTTHCS*TPWLSH
Trigger: ATGGGAAAGCCAAGGTGTGCAACTACAGTGGGTGGT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTTTGGTCACAGTGACTaGCACGTGCTCTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAFGHSD*HVLFQG
Trigger: CCCTTGGAAGAGCACGTGGCAGTCACTGTGACCAAA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAGAGAGAGGCTGGTTTaGAGCTTCACGGCCAATAGG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREARERLV*SFTANR
Trigger: CCTATTGGCCGTGAAGCTGCAAACCAGCCTCTCTCT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATGACTAATGCATGCTaGTGGTCATTTCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIMTNAC*WSFLRR
Trigger: CCGCCGCAGAAATGACCAGCAGCATGCATTAGTCAT...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGTGCTGCCACATCCCGTaGCGAGCTCCCCCGATCCTT +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTECCHIP*RAPPIL
Trigger: AAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCA...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCGGGCAACAGAAAAGATaGCCTGGTGACATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGGQQKR*PGDMRA
Trigger: GGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCC...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCGCCAGCGGCTCTGCGTaGTGGTACAGCATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSASGSA*WYSMAF
Trigger: GAACGCCATGCTGTACCACCACGCAGAGCCGCTGGC...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGCAGGGCCCTCTAAATaGGGACTGGTGAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTAGPSK*GLVKTK
Trigger: CTTTGTTTTCACCAGTCCCCATTTAGAGGGCCCTGC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTACAAACTCCCAGGTTTaGAAGCCAAGCCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTTNSQV*KPSLSE
Trigger: CTCAGAGAGGCTTGGCTTCCAAACCTGGGAGTTTGT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTTAGTCACCCATCACTaGATTCGACCTCGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTLVTHH*IRPRAD
Trigger: GTCTGCTCGAGGTCGAATCCAGTGATGGGTGACTAA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAAGGGAAGGCCAACATaGAGAAGGAGCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGKGRPT*RRSHRP
Trigger: GGGCCTGTGGCTCCTTCTCCATGTTGGCCTTCCCTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAAACCAGAAAGACTCCTaGGGCCCTTTCATGATGGCT +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSNQKDS*GPFMMA
Trigger: AGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTT...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp ACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTaGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCT +
Preference number: 4 (lower is better)
Translates to: TKGSDFVLSAAH*LPHPVPSSPDP
Trigger: AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp CATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTaGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HPTPQLQPQPVL*SLPEGLELAPG
Trigger: TCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAAGCTCCTGGAGGGGCTTaGCTCCCGCAGCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQAPGGA*LPQPAA
Trigger: GGCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGC...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATTGCCACGCCAATCCTTaGTTTCCTGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHCHANP*FPGPRL
Trigger: CAGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCA...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGAAAAGATGGCCTGGTaGCATGCGGGCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGEKMAW*HAGLEA
Trigger: TGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCATGGCCAAGCCCTGGTaGGATTGTCAGCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLMAKPW*DCQLIL
Trigger: CAGAATGAGCTGACAATCTCACCAGGGCTTGGCCAT...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGGCCTCCATCCATTCCTaGGCCCTCTGTCGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTEASIHS*ALCRVS
Trigger: TGAGACCCGACAGAGGGCTCAGGAATGGATGGAGGC...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGCAGGTCGGCAAGTaGATACAGGTGGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLLQVGK*IQVDLL
Trigger: CAACAGATCCACCTGTATTCACTTGCCGACCTGCAG...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACCGTTTTGGTCACAGTaGCTGCCACGTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGPFWSQ*LPRALP
Trigger: TGGAAGAGCACGTGGCAGTCACTGTGACCAAAACGG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTAAGCTCCTAACTAGGTaGCCCTTTAGCACTACAGAC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTKLLTR*PFSTTD
Trigger: GTCTGTAGTGCTAAAGGGTCACCTAGTTAGGAGCTT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTACAACAGCACTCAGATaGCTGCATGCCAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPTTALR*LHAKGL
Trigger: GAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTGT...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAAGCCACTGGGTTGCCATaGGTGAGCATCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: GLSSLISLVADDRCQLEQATGLP*VSISRQ
Trigger: CTGTCTGGAGATGCTCACTCATGGCAACCCAGTGGC...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTACATGCATCATGGAATaGACAGGCTCCAAGAGCATC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTTCIME*TGSKSI
Trigger: GATGCTCTTGGAGCCTGTGCATTCCATGATGCATGT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGTGAGAGTTCTGACATaGATCATGGAATGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTVRVLT*IMECTG
Trigger: GCCTGTGCATTCCATGATGCATGTCAGAACTCTCAC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCCCAACCAAGAGGGGTaGTTCAGCAATAGAGCTATG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAPNQEG*FSNRAM
Trigger: CATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTTACTGAGTACCTCATaGCCCACCAGTTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALLSTS*PTSSGT
Trigger: AGTCCCTGAACTGGTGGGGCATGAGGTACTCAGTAA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCTGCTGCTGTTGCTGCTaGTGCAAAGGCGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLCCCCC*CKGVVL
Trigger: CAAAACCACGCCTTTGCAGCAGCAGCAACAGCAGCA...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTCCTGGCCTCCAGGTTaGCTAAAACAGATATGCTCT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTSWPPG*LKQICS
Trigger: AGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCTCCTGGCCTCCAGGTTaGCTAAAACAGATATGCTCT +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSISWPPG*LKQICS
Trigger: AGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGA...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGATCGCTGGCAGCCTaGACATTTGAAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPGSLAA*TFETLS
Trigger: GCTCAGAGTTTCAAATGTGCAGGCTGCCAGCGATCC...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCGTTGTGGACTATGCGTaGTGGAATGAGAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIVVDYA*WNEKAV
Trigger: GACAGCTTTCTCATTCCAGCACGCATAGTCCACAAC...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAAAGCATGGCGTTCTCCTaGTGGATGTCGATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GLSSLISLVADDRCQLEQSMAFS*WMSMSG
Trigger: GCCGCTCATCGACATCCAGCAGGAGAACGCCATGCT...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAAAGCATGGCGTTCTCCTaGTGGATGTCGATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQSMAFS*WMSMSG
Trigger: GCCGCTCATCGACATCCAGCAGGAGAACGCCATGCT...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAGCGACTTCAGCCGCTaGCGCAGCCGCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFSDFSR*RSRSTA
Trigger: CGCCGTGCTGCGGCTGCGGCAGCGGCTGAAGTCGCT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATA +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDILCHR*PAAEQI
Trigger: TATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGAT...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGCGGCGGAGATCCTCTaGCACCGCTGCCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYAAEIL*HRCPAA
Trigger: AGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAACAGTGACTGCCACGTaGTCTTCCAAGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGTVTAT*SSKGTA
Trigger: TGCAGTGCCCTTGGAAGAGCACGTGGCAGTCACTGT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTTAGTTGAAGGGTCCTaGAGGCTTCAAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTLVEGS*RLQVVQ
Trigger: CTGAACCACTTGAAGCCTGCAGGACCCTTCAACTAA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTTGCTGCCACATCCCGTaGCGAGCTCCCCCGATCCTT +
Preference number: 4 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPCCHIP*RAPPIL
Trigger: AAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCA...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGACAATCCTTGATTTCCTaGGCCCCGGCTGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRQSLIS*APAATL
Trigger: GAGAGTAGCAGCCGGGGCCCAGGAAATCAAGGATTG...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGACTTCATTGGGCTCCCTaGAGCAGGCCAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRLHWAP*SRPNPK
Trigger: CTTTGGGTTTGGCCTGCTCCAGGGAGCCCAATGAAG...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTACTCCAGAAACTCCTTaGCCTGCTTCGACACCTTAT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTTPETP*PASTPY
Trigger: ATAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACGTGGTGGTACAGCATaGCGTTCTCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGRGGTA*RSPAGC
Trigger: ACATCCAGCAGGAGAACGCCATGCTGTACCACCACG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGCGGCTCTGCGTGGTaGTACAGCATGGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSGSAW*YSMAFS
Trigger: GGAGAACGCCATGCTGTACCACCACGCAGAGCCGCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGGCCAGCGGCTCTGCGTaGTGGTACAGCATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQASGSA*WYSMAF
Trigger: GAACGCCATGCTGTACCACCACGCAGAGCCGCTGGC...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCAGATGAACCCCTTCTaGCTACAAAGACTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAQMNPF*LQRLQL
Trigger: CAGCTGCAGTCTTTGTAGCCAGAAGGGGTTCATCTG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGCCTGGAAAACACGGTaGAGCGTCACATCATTAGGT +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAAWKTR*SVTSLG
Trigger: ACCTAATGATGTGACGCTCCACCGTGTTTTCCAGGC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTGGGGCCAAAGGAACTaGTGTGGGTTGAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAWGQRN*CGLRGK
Trigger: TTTACCTCTCAACCCACACCAGTTCCTTTGGCCCCA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGCAGGGCCCTCTAAATaGGGACTGGTGAAAACAAAG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAAGPSK*GLVKTK
Trigger: CTTTGTTTTCACCAGTCCCCATTTAGAGGGCCCTGC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTGGAAAAAGCGGGCCTaGAAAGAACACTACCCCCAT +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAWKKRA*KEHYPH
Trigger: ATGGGGGTAGTGTTCTTTCCAGGCCCGCTTTTTCCA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTAGTCTCCCAAGTAGCTaGGATTATAGGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTSLPSS*DYRHPP
Trigger: TGGTGGATGCCTATAATCCCAGCTACTTGGGAGACT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGGCCTGCCTCTGGGCTaGGGCTCAGAACTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDGLPLG*GSELGA
Trigger: TGCCCCTAGTTCTGAGCCCCAGCCCAGAGGCAGGCC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTATTGCACAGGCTCCTaGGCTCAAGCAATCTACCCA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAYCTGS*AQAIYP
Trigger: TGGGTAGATTGCTTGAGCCCAGGAGCCTGTGCAATA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCTCCTGGAGGGGCTTaGCTCCCGCAGCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSAPGGA*LPQPAA
Trigger: GGCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGCTCCTGGAGGGGCTTaGCTCCCGCAGCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLAPGGA*LPQPAA
Trigger: GGCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTGCCACGCCAATCCTTaGTTTCCTGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLCHANP*FPGPRL
Trigger: CAGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCTTCTAAGGCTGGGCTaGTATCATCCACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALLRLG*YHPLPK
Trigger: CTTTGGAAGTGGATGATATCAGCCCAGCCTTAGAAG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAATGGCCAAGCCCTGGTaGGATTGTCAGCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGMAKPW*DCQLIL
Trigger: CAGAATGAGCTGACAATCTCACCAGGGCTTGGCCAT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTCCTGTAGAGAGTCCCTaGTTTGAGGATGTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTPVESP*FEDVLV
Trigger: TACCAAAACATCCTCAAATCAGGGACTCTCTACAGG...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCCTGCTGGATGTCGATaGGCGGCTCTTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRPAGCR*AALRTR
Trigger: ACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCCTGCTGGATGTCGATaGGCGGCTCTTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHPAGCR*AALRTR
Trigger: ACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGG...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACTGCAGGTCGGCAAGTaGATACAGGTGGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGLQVGK*IQVDLL
Trigger: CAACAGATCCACCTGTATTCACTTGCCGACCTGCAG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCTGGGAGCAAGCAGCTaGAATTCTTGGCTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALGASS*NSWLSV
Trigger: TACACTTAGCCAAGAATTTCAGCTGCTTGCTCCCAG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGACTCTCGGCAGGTATaGCCCTGGGTGCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDDSRQV*PWVPVS
Trigger: GCTCACAGGCACCCAGGGTCATACCTGCCGAGAGTC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAAATTGTTGTCTCTACCTaGGGGGCTCGAGTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQIVVST*GARVGS
Trigger: GGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAAT...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAATTGACTCCCGCAGCCTaGCGCCCGCCTCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEELTPAA*RPPHGD
Trigger: GTCACCGTGAGGCGGGCGGCAGGCTGCGGGAGTCAA...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTGCTGTTGCTGCTGCTaGAAAGGCGTGGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGCCCCC*KGVVLR
Trigger: CCTCAAAACCACGCCTTTGCAGCAGCAGCAACAGCA...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACGGCTGCTGCTGTTGCTaGTGCTGCAAAGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHGCCCC*CCKGVV
Trigger: AACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCC...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTGGCTGCTGCTGTTGCTaGTGCTGCAAAGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGGCCCC*CCKGVV
Trigger: AACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCC...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAAAATGGCTGCTGCTGTTaGTGCTGCTGCAAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: GLSSLISLVADDRCQLEQNGCCC*CCCKGV
Trigger: CACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATT...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGGCGGCCAGCGGCTCTaGGTGGTGGTACAGCATGGC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFGGQRL*VVVQHG
Trigger: GCCATGCTGTACCACCACGCAGAGCCGCTGGCCGCC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATGTGCCGCACATTTGCTaGCACATCCCGTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHVPHIC*HIPCRA
Trigger: AGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCCTGCTCCATAATATCTaGAGCCTCATCTCTAGCCTA +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSILLHNI*SLISSL
Trigger: TAGGCTAGAGATGAGGCTGCAGATATTATGGAGCAG...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTGAGATGGTTTGTTTCTaGTCCATAATATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VLSAAHLLPHPVPSSPDPEMVCF*SIISAA
Trigger: GGCTGCAGATATTATGGAGCAGAAACAAACCATCTC...AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGGGTTGTCCCTCTCTaGACCATAAACTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGVVPL*TINCSL
Trigger: CAAAGAACAGTTTATGGTCCAGAGAGGGACAACCCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAATCCAGGTTGTCCATCTaGACAGCCAGACACACGTCC +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQSRLSI*TARHTS
Trigger: GGACGTGTGTCTGGCTGTCCAGATGGACAACCTGGA...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTAACTCCTCGCCACATTaGCAGCTATCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPNSSPH*QLSSEP
Trigger: AGGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTT...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGAAGTATCCCAGTTGTaGACTATGCGTGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAEVSQL*TMRAGM
Trigger: CATTCCAGCACGCATAGTCCACAACTGGGATACTTC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGCGTGGTGGTACAGCATaGCGTTCTCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPRGGTA*RSPAGC
Trigger: ACATCCAGCAGGAGAACGCCATGCTGTACCACCACG...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTAGCGGCTCTGCGTGGTaGTACAGCATGGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPSGSAW*YSMAFS
Trigger: GGAGAACGCCATGCTGTACCACCACGCAGAGCCGCT...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGCCAGCGGCTCTGCGTaGTGGTACAGCATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDASGSA*WYSMAF
Trigger: GAACGCCATGCTGTACCACCACGCAGAGCCGCTGGC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTGGGGAAGCGGCGTGTaGGGGAAAGGAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLWGSGV*GKGAMG
Trigger: CCCCATTGCTCCTTTCCCCCACACGCCGCTTCCCCA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTGGGGAAGCGGCGTGTaGGGGAAAGGAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDWGSGV*GKGAMG
Trigger: CCCCATTGCTCCTTTCCCCCACACGCCGCTTCCCCA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTACCAAGCTGTCAGGGTaGTACGAAAAGGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREATKLSG*YEKERK
Trigger: TTTCCTCTCCTTTTCGTACCACCCTGACAGCTTGGT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGCCTTTTCTAGCCAATaGGTAGAGAACAAACTCCCA +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTAFSSQ*VENKLP
Trigger: TGGGAGTTTGTTCTCTACCCATTGGCTAGAAAAGGC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATCTTCACTCATCTCTCTaGTGGCTGATGATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDLHSSL*WLMIAA
Trigger: GGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAG...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCGCAAAGGCGTGGTTTTaGGGACTACCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSAKAWF*GLPSSP
Trigger: TGGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGC...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGGTGACATGCGGGCCTTaGAGCAATGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGEVTCGP*SNGCCC
Trigger: ACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCAC...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTTATGCTCTGGAAGTGTaGAAGCTGGTACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPYALEV*KLVRGI
Trigger: TATGCCACGTACCAGCTTTCACACTTCCAGAGCATA...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCTATGCTCTGGAAGTGTaGAAGCTGGTACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLYALEV*KLVRGI
Trigger: TATGCCACGTACCAGCTTTCACACTTCCAGAGCATA...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTAGAGAGTCCCTGATTTaGGGATGTTTTGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTRESLI*GCFGTV
Trigger: AACAGTACCAAAACATCCTCAAATCAGGGACTCTCT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCCTGTAGAGAGTCCCTaGTTTGAGGATGTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAPVESP*FEDVLV
Trigger: TACCAAAACATCCTCAAATCAGGGACTCTCTACAGG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGCCTCCATCCATTCCTaGGCCCTCTGTCGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDASIHS*ALCRVS
Trigger: TGAGACCCGACAGAGGGCTCAGGAATGGATGGAGGC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGATCATGCCCACCCATTTaGTCCTTGGGTTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRSCPPI*SLGLFL
Trigger: GAGGAACAAACCCAAGGATCAAATGGGTGGGCATGA...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCCGCTGCCCGGCAGCTaGACAAATAGGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYPLPGS*TNRLGA
Trigger: CGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCCGCTGCCCGGCAGCTaGACAAATAGGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFPLPGS*TNRLGA
Trigger: CGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTACAGATTTCACAGATaGACCCCTTCTGGCTACAAA +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTYRFHR*TPSGYK
Trigger: TTTGTAGCCAGAAGGGGTTCATCTGTGAAATCTGTA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCCGTTTTGGTCACAGTaGCTGCCACGTGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRPFWSQ*LPRALP
Trigger: TGGAAGAGCACGTGGCAGTCACTGTGACCAAAACGG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTCTGTTGCCAAGTGTTTaGGATTTTCCACCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTLLPSV*DFPPFF
Trigger: GAAAAAGGGTGGAAAATCTCAAACACTTGGCAACAG...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCCAGAATTTCGCCCTTaGCTCTCGGCAGGTATGACC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRPEFRP*LSAGMT
Trigger: GGTCATACCTGCCGAGAGTCAAGGGCGAAATTCTGG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTAAACACCGTTCCACATaGCAGAAATCAACACTTGTC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTKHRST*QKSTLV
Trigger: GACAAGTGTTGATTTCTGTCATGTGGAACGGTGTTT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCGCCACTGGGTTGCCATaGGTGAGCATCTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFATGLP*VSISRQ
Trigger: CTGTCTGGAGATGCTCACTCATGGCAACCCAGTGGC...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCCTAGGTGAGAAGACTTaGAGGCTAGCAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGLGEKT*RLAAGI
Trigger: GATTCCAGCTGCTAGCCTTCAAGTCTTCTCACCTAG...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGATCGTGATCGAGCATaGCCTGGCTTGAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDDRDRA*PGLKVE
Trigger: CTCAACTTTCAAGCCAGGGCATGCTCGATCACGATC...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGAATGGCTGCTGCTGTTaGTGCTGCTGCAAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTENGCCC*CCCKGV
Trigger: CACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATT...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCCGGGCACAGCAGCATaGACTACTTCCCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRPGTAA*TTSQSF
Trigger: GAAGCTTTGGGAAGTAGTGCATGCTGCTGTGCCCGG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGCCGGGCACAGCAGCATaGACTACTTCCCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTEPGTAA*TTSQSF
Trigger: GAAGCTTTGGGAAGTAGTGCATGCTGCTGTGCCCGG...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAGCGACTTCAGCCGCTaGCGCAGCCGCAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLSDFSR*RSRSTA
Trigger: CGCCGTGCTGCGGCTGCGGCAGCGGCTGAAGTCGCT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCGGCGGAGATCCTCTaGCACCGCTGCCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSAAEIL*HRCPAA
Trigger: AGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGACATAGAAGGCATCTaGTCAGCGCGAAAGCTACAG +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGDIEGI*SARKLQ
Trigger: CTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATGTC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGCTCTTTCAAGGTCTTaGTCCAACTTCACGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTALSRS*SNFTFS
Trigger: TGAAAACGTGAAGTTGGAGCAAGACCTTGAAAGAGC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGCAGCACTCAGATGACTaGATGCCAAGGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTEQHSDD*MPRDSQ
Trigger: CTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTG...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCCAATCCTTGATTTCCTaGGCCCCGGCTGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSQSLIS*APAATL
Trigger: GAGAGTAGCAGCCGGGGCCCAGGAAATCAAGGATTG...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGTGAAAGCTGGTACGTaGCATAAAGGTTTTGATTCC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTVKAGT*HKGFDS
Trigger: GGAATCAAAACCTTTATGCCACGTACCAGCTTTCAC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCGTGAAAGCTGGTACGTaGCATAAAGGTTTTGATTCC +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIVKAGT*HKGFDS
Trigger: GGAATCAAAACCTTTATGCCACGTACCAGCTTTCAC...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAGATTTGAGGATGTTTTaGTACTGTTTGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSDLRMF*YCLELS
Trigger: GGACAGCTCCAAACAGTACCAAAACATCCTCAAATC...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGAAGTATCCCAGTTGTaGACTATGCGTGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPEVSQL*TMRAGM
Trigger: CATTCCAGCACGCATAGTCCACAACTGGGATACTTC...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTATACCACGTTTTGTCTaGGAGCAAGCAGCTGAAATT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTIPRFV*EQAAEI
Trigger: AATTTCAGCTGCTTGCTCCCAGACAAAACGTGGTAT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGTATTCCCTTCTTGGTaGAGGCCTACTCTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAVFPSW*RPTLEE
Trigger: TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATAC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATACTAATGCATGCTGCTaGTCATTTCTGCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDTNACC*SFLRRR
Trigger: TCTCCGCCGCAGAAATGACCAGCAGCATGCATTAGT...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp ATAAATGAGGGGTGTATGCTTTCTGTCAGAGGGGGCTaGGCTCCTGTTTCCAGCCATCGGCTCTGCTTACGT +
Preference number: 4 (lower is better)
Translates to: INEGCMLSVRGG*APVSSHRLCLR
Trigger: ACGTAAGCAGAGCCGATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAGAAAGCATACACCCCTCATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGAGATTATTCTTCAGTaGGACCTCTGTGAAGACAAC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAEIILQ*DLCEDN
Trigger: GTTGTCTTCACAGAGGTCTCACTGAAGAATAATCTC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACTTCTAAGGCTGGGCTaGTATCATCCACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGLLRLG*YHPLPK
Trigger: CTTTGGAAGTGGATGATATCAGCCCAGCCTTAGAAG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATTGTCTGTTATGTTACTaGGTACCTCATGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDCLLCY*VPHAPP
Trigger: TGGTGGGGCATGAGGTACTCAGTAACATAACAGACA...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGTGACATGCGGGCCTTaGAGCAATGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLVTCGP*SNGCCC
Trigger: ACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCAC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGGAAAAGATGGCCTGGTaGCATGCGGGCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGEEKMAW*HAGLEA
Trigger: TGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTC...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTGAAAAGATGGCCTGGTaGCATGCGGGCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVEKMAW*HAGLEA
Trigger: TGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTC...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGCCTTTAGCTGTAGCTaGGTGTTGTCATACAAAACA +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAAFSCS*VLSYKT
Trigger: TGTTTTGTATGACAACACTCAGCTACAGCTAAAGGC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAGAGAGTCCCTGATTTaGGGATGTTTTGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREARESLI*GCFGTV
Trigger: AACAGTACCAAAACATCCTCAAATCAGGGACTCTCT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGCTATGCGTGCTGGAATaGGAAAGCTGTCATCCACGT +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPLCVLE*ESCHPR
Trigger: ACGTGGATGACAGCTTTCTCATTCCAGCACGCATAG...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTCGACACCTTATACTTTaGAGTATCCCAGTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPRHLIL*SIPVVD
Trigger: GTCCACAACTGGGATACTTCAAAGTATAAGGTGTCG...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCCTGCTGGATGTCGATaGGCGGCTCTTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDPAGCR*AALRTR
Trigger: ACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGCAGCTGTACACGTGTaGGGTGGCAAATTTAATGAC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGAAVHV*GGKFND
Trigger: GTCATTAAATTTGCCACCTCACACGTGTACAGCTGC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACTGGGAGCAAGCAGCTaGAATTCTTGGCTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGLGASS*NSWLSV
Trigger: TACACTTAGCCAAGAATTTCAGCTGCTTGCTCCCAG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATCAGGGTCGGAAGAGTaGTACAAGGTGTGCAACATA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGSGSEE*YKVCNI
Trigger: TATGTTGCACACCTTGTATCACTCTTCCGACCCTGA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAAACACCGTTCCACATaGCAGAAATCAACACTTGTC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAKHRST*QKSTLV
Trigger: GACAAGTGTTGATTTCTGTCATGTGGAACGGTGTTT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGACTGTGGCTAGCTCAATaGTTGGCACACAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRLWLAQ*LAHRKH
Trigger: ATGCTTTCTGTGTGCCAATCATTGAGCTAGCCACAG...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCCAGCACAAATGTAAATaGCTTCCAGTTGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIQHKCK*LPVVLD
Trigger: GTCCAAAACAACTGGAAGGCATTTACATTTGTGCTG...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGAGCATGGCGTTCTCCTaGTGGATGTCGATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLSMAFS*WMSMSG
Trigger: GCCGCTCATCGACATCCAGCAGGAGAACGCCATGCT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATA +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHILCHR*PAAEQI
Trigger: TATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGAT...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGACTTCTGCTTCTTCTaGAGCTCTCGGCGAACACAC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRDFCFF*SSRRTH
Trigger: GTGTGTTCGCCGAGAGCTGCAGAAGAAGCAGAAGTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCACCTCGGATCTCACTaGAGCCGGAAGGAAGTCACG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLHLGSH*SRKEVT
Trigger: CGTGACTTCCTTCCGGCTGCAGTGAGATCCGAGGTG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGAGTGCCTGGGTCTGCTaGAGGTCGGCAAGTGAATAC +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQSAWVC*RSASEY
Trigger: GTATTCACTTGCCGACCTGCAGCAGACCCAGGCACT...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAAGTGCCGCACATTTGCTaGCACATCCCGTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKVPHIC*HIPCRA
Trigger: AGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATTTAGTGCCGCACATTTaGTGCCACATCCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHLVPHI*CHIPCR
Trigger: TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAA...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGTTAGTGCCGCACATTTaGTGCCACATCCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQLVPHI*CHIPCR
Trigger: TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAA...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGATCCAACTCCACAGCTaGAGCCTCAACCGGTATTGT +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPIQLHS*SLNRYC
Trigger: ACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTCAGCAATAGAGCTATaGAAACAACTGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTSAIEL*KQLEET
Trigger: GGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATGGGCAACAGAAAAGATaGCCTGGTGACATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYGQQKR*PGDMRA
Trigger: GGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCC...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGTGGCAGCAGCCCACTaGTTTTCTTCTGGAAACTAT +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGVAAAH*FSSGNY
Trigger: ATAGTTTCCAGAAGAAAACCAGTGGGCTGCTGCCAC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCATTGGAAAGACCTATaGATCGCTGGCAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRHWKDL*IAGSLH
Trigger: GTGCAGGCTGCCAGCGATCCATAGGTCTTTCCAATG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATACTCCAGAAACTCCTTaGCCTGCTTCGACACCTTAT +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDTPETP*PASTPY
Trigger: ATAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGT...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATATGGCGTTCTCCTGCTaGATGTCGATGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHMAFSC*MSMSGS
Trigger: AGAGCCGCTCATCGACATCCAGCAGGAGAACGCCAT...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAGCGGCTCTGCGTGGTaGTACAGCATGGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRSGSAW*YSMAFS
Trigger: GGAGAACGCCATGCTGTACCACCACGCAGAGCCGCT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACACGGACACCAGGTCCTaGAAGGACCCAGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDTDTRS*KDPAVS
Trigger: AGAGACTGCTGGGTCCTTCCAGGACCTGGTGTCCGT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGACGGACACCAGGTCCTaGAAGGACCCAGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLTDTRS*KDPAVS
Trigger: AGAGACTGCTGGGTCCTTCCAGGACCTGGTGTCCGT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCAAGGGCACTGCAGCTaGAGAACACTACCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRQGHCS*RTLPAK
Trigger: TTTGGCAGGTAGTGTTCTCCAGCTGCAGTGCCCTTG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACATGAGTTGGGGTCTTaGGGAAGCGGCGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEHELGS*GSGVWG
Trigger: CCCCCACACGCCGCTTCCCCAAGACCCCAACTCATG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTACAAGGGGAGGAGATaGCACTGCACTTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRYKGRR*HCTSGL
Trigger: GAGACCTGAAGTGCAGTGCCATCTCCTCCCCTTGTA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTAGTTTAACAATGACTTaGATTTTCCCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTSLTMT*IFPQPC
Trigger: GCATGGCTGAGGGAAAATCCAAGTCATTGTTAAACT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCATTTTTGGCCCGGCTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRHFWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGCCGGGCCAAAAATG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAGAAGGAGGTATTCTCTaGGGAAAATTCTCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSEGGIL*GKFSKN
Trigger: GTTTTTGGAGAATTTTCCCCAGAGAATACCTCCTTC...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATCCTTCAATCATCTGTaGATCAGGTTAGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSSFNHL*IRLDLA
Trigger: AGCCAAATCTAACCTGATCCACAGATGATTGAAGGA...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGATCAGTGAGACCTCTGTaGAGACAACAGCAAGTACTT +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRSVRPL*RQQQVL
Trigger: AAGTACTTGCTGTTGTCTTCACAGAGGTCTCACTGA...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGGAGCATGCCCTGGCTTaGAAGTTGAGGTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQEHALA*KLRSHP
Trigger: TGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTC...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAAGTGACATGCGGGCCTTaGAGCAATGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKVTCGP*SNGCCC
Trigger: ACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCAC...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGCCTCCATCCATTCCTaGGCCCTCTGTCGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYASIHS*ALCRVS
Trigger: TGAGACCCGACAGAGGGCTCAGGAATGGATGGAGGC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGTTGCAGGTTTTGCTCTaGACTCCTCGCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQLQVLL*TPRHIG
Trigger: GCCAATGTGGCGAGGAGTTCAGAGCAAAACCTGCAA...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTCGGCTCTGCTTACGTaGTTCCCCGCCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYSALLT*FPASTG
Trigger: TCCTGTGGAGGCGGGGAATCACGTAAGCAGAGCCGA...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTATGCATGTATGGTGTTaGGCTATTAAGGTGAAATGT +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTMHVWC*AIKVKC
Trigger: ACATTTCACCTTAATAGCTCAACACCATACATGCAT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCCAGAATTTCGCCCTTaGCTCTCGGCAGGTATGACC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDPEFRP*LSAGMT
Trigger: GGTCATACCTGCCGAGAGTCAAGGGCGAAATTCTGG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAAACAACCCCTGTGTTaGAACCAGGCAGTATTGGAA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGKQPLC*NQAVLE
Trigger: TTCCAATACTGCCTGGTTTCAACACAGGGGTTGTTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATATTGTTGTCTCTACCTaGGGGGCTCGAGTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYIVVST*GARVGS
Trigger: GGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAAT...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGACAACAGCACTCAGATaGCTGCATGCCAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGETTALR*LHAKGL
Trigger: GAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTGT...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGATCCCATAAACCTCTaGCTGCTGCACAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRDPINL*LLHSLF
Trigger: GAAAAGGCTGTGCAGCAGGCAGAGGTTTATGGGATC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGTGCTGCTGTTGCTGCTaGTGCAAAGGCGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGECCCCC*CKGVVL
Trigger: CAAAACCACGCCTTTGCAGCAGCAGCAACAGCAGCA...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAATGGCTGCTGCTGTTaGTGCTGCTGCAAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDNGCCC*CCCKGV
Trigger: CACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAATGTTTGGGAATGTCTaGTTGTGTTCAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: VPHICCHIPCRAPPILQSMFGNV*LCSVFP
Trigger: AGGAAATACTGAACACAAGCAGACATTCCCAAACAT...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAAGGTTTTGATTCCCACTaGTGTCGAGGCTGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQGFDSH*CRGCRS
Trigger: ACTTCTACAGCCTCGACAGCAGTGGGAATCAAAACC...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTCCTGGCCTCCAGGTTaGCTAAAACAGATATGCTCT +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPSWPPG*LKQICS
Trigger: AGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGA...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATCCGGGCACAGCAGCATaGACTACTTCCCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNPGTAA*TTSQSF
Trigger: GAAGCTTTGGGAAGTAGTGCATGCTGCTGTGCCCGG...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCCGGGCACAGCAGCATaGACTACTTCCCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLPGTAA*TTSQSF
Trigger: GAAGCTTTGGGAAGTAGTGCATGCTGCTGTGCCCGG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATTCCTCAGTGTGACTTaGAGGTTTTGCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGFLSVT*RFCSEL
Trigger: GAGTTCAGAGCAAAACCTGCAAGTCACACTGAGGAA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTGGATCGCTGGCAGCCTaGACATTTGAAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPGSLAA*TFETLS
Trigger: GCTCAGAGTTTCAAATGTGCAGGCTGCCAGCGATCC...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTCACCACCCACTGTAGTTaGACACCTTGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SPSTLGSTPLTSTMPICLTTHCS*TPWLSH
Trigger: ATGGGAAAGCCAAGGTGTGCAACTACAGTGGGTGGT...GAGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATCCACGTGGCAGCTACTaGAGTAATACCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHPRGSY*SNTTHC
Trigger: ACAGTGGGTGGTATTACTGCAGTAGCTGCCACGTGG...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTCCACGTGGCAGCTACTaGAGTAATACCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVPRGSY*SNTTHC
Trigger: ACAGTGGGTGGTATTACTGCAGTAGCTGCCACGTGG...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGACAGACTTTTCTTTaGATTCAGAATGGAAAACGG +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGQTFL*IQNGKR
Trigger: CCGTTTTCCATTCTGAATGCAAAGAAAAGTCTGTCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCTGCTAACGCCCCTCTaGAGAAAATGTTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRLLTPL*RKCSVC
Trigger: GCACACTGAACATTTTCTGCAGAGGGGCGTTAGCAG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAACAGGTGTGAGCCGCTaGGGCCAACCACTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEETGVSR*GQPLSL
Trigger: GAGGGAAAGTGGTTGGCCGCAGCGGCTCACACCTGT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTCATCCAACTCCACAGCTaGAGCCTCAACCGGTATTGT +
Preference number: 4 (lower is better)
Translates to: SPSTLGSTPLTSTMPICLIQLHS*SLNRYC
Trigger: ACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT...GAGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCTTCATTGGGCTCCCTaGAGCAGGCCAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLLHWAP*SRPNPK
Trigger: CTTTGGGTTTGGCCTGCTCCAGGGAGCCCAATGAAG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCCCAGGAAAGATTATCTaGGGTTGTCCCTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSPGKII*GCPSLD
Trigger: GTCCAGAGAGGGACAACCCCAGATAATCTTTCCTGG...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAAAACAGATATGCTCTaGAAGTGTGAAAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAKTDML*KCESWY
Trigger: GTACCAGCTTTCACACTTCCAGAGCATATCTGTTTT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGGTGGCAGCAGCCCACTaGTTTTCTTCTGGAAACTAT +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPVAAAH*FSSGNY
Trigger: ATAGTTTCCAGAAGAAAACCAGTGGGCTGCTGCCAC...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTGTTTTGGTACTGTTTaGAGCTGTCCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRCFGTV*SCPGQG
Trigger: CCCCTGTCCTGGACAGCTCCAAACAGTACCAAAACA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAACCTTGGCTTTCCCATTaGAAAGACCTATGGATCGCT +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQPWLSH*KDLWIA
Trigger: AGCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGG...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGAAGGAGGTATTCTCTaGGGAAAATTCTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHREGGIL*GKFCGG
Trigger: TCCGCCGCAGAATTTTCCCCAGAGAATACCTCCTTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACTGTCAGAGGGGGCTTaGCTCCTGTTTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRLSEGA*LLFPAI
Trigger: GATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGTTAAGGGGAAGGAATaGGAGCTGTCAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDVKGKE*ELSGSQ
Trigger: CTGGGACCCTGACAGCTCCCATTCCTTCCCCTTAAC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGGAAGTATCATGAGTTaGGGTCTTGGGGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLGSIMS*GLGEAA
Trigger: CGCCGCTTCCCCAAGACCCCAACTCATGATACTTCC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGAGGAAACAGGAGTGCTaGACATGGACCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLRKQEC*TWTQLW
Trigger: CCAGAGCTGGGTCCATGTCCAGCACTCCTGTTTCCT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGAATGTCATAGGCCTGTaGCTGGCACCGACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLNVIGL*LAPTKL
Trigger: CAGCTTGGTCGGTGCCAGCCACAGGCCTATGACATT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTACAGTTTCTAAGCAGTaGAACAATTACCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTTVSKQ*NNYLTV
Trigger: CACTGTTAGGTAATTGTTCCACTGCTTAGAAACTGT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATGAGCTCCTTCTCACCTaGGCAACAGGGCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYELLLT*ATGLSI
Trigger: GATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTC...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCAACCAGAAAGACTCCTaGGGCCCTTTCATGATGGCT +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSNQKDS*GPFMMA
Trigger: AGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTT...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp CAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTaGGCTCCTGGAATCCTTATCTCAACTGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QPVLLSLPEGLE*APGILISTELL
Trigger: AAGGAGCTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGCCAAAGCCTAATTTaGTGGCTCAGTGGACACACA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSQSLI*WLSGHT
Trigger: TGTGTGTCCACTGAGCCATCAAATTAGGCTTTGGCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTGCCACGCCAATCCTTaGTTTCCTGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSCHANP*FPGPRL
Trigger: CAGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ATCAAACTGAATAGAAATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATTGCCACGCCAATCCTTaGTTTCCTGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: IKLNRNEEPERLLGPFHDCHANP*FPGPRL
Trigger: CAGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCA...ATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATTTCTATTCAGTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCGGTCCCTCCGACGCTaGCAGATATTGAAGAAATTA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRRSLRR*QILKKL
Trigger: TAATTTCTTCAATATCTGTCAGCGTCGGAGGGACCG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTCGGTCCCTCCGACGCTaGCAGATATTGAAGAAATTA +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGRSLRR*QILKKL
Trigger: TAATTTCTTCAATATCTGTCAGCGTCGGAGGGACCG...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTGACATGCGGGCCTTaGAGCAATGGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVTCGP*SNGCCC
Trigger: ACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATTTGCAGGTTTTGCTCTaGACTCCTCGCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYLQVLL*TPRHIG
Trigger: GCCAATGTGGCGAGGAGTTCAGAGCAAAACCTGCAA...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGGCACATTTGAAACTCTaGGCAGTGAGTCCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQAHLKL*AVSPRS
Trigger: GGAACGAGGACTCACTGCTCAGAGTTTCAAATGTGC...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTGCACATTTGAAACTCTaGGCAGTGAGTCCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPAHLKL*AVSPRS
Trigger: GGAACGAGGACTCACTGCTCAGAGTTTCAAATGTGC...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTGGATTGTTGATTGGTaGATCCCTGGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDWIVDW*IPGLRV
Trigger: GACCCGAAGGCCAGGGATTCACCAATCAACAATCCA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGGATCGTCTGGACAATaGTGTACACAGAGCATACGT +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRGSSGQ*CTQSIR
Trigger: ACGTATGCTCTGTGTACATCATTGTCCAGACGATCC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTTACCTCAGCCTCTGTaGAGGCTAAAAATAAATAAC +
Preference number: 4 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALPQPL*RLKINN
Trigger: GTTATTTATTTTTAGCCTTCACAGAGGCTGAGGTAA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAAAAGTAAGCTACAGTaGCAGGGAGCTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRKSKLQ*QGAGGG
Trigger: TCCGCCCCCAGCTCCCTGTCACTGTAGCTTACTTTT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGGACGATCTCACACATaGGTTTCTGGCACTTTTAGG +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRGRSHT*VSGTFR
Trigger: CCTAAAAGTGCCAGAAACTCATGTGTGAGATCGTCC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGAATCAAAAACCGATaGCCCTCTCAGCGAATCCGA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRRIKNR*PSQRIR
Trigger: TCGGATTCGCTGAGAGGGTCATCGGTTTTTGATTCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTCTAGGTGAGAAGACTTaGAGGCTAGCAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPLGEKT*RLAAGI
Trigger: GATTCCAGCTGCTAGCCTTCAAGTCTTCTCACCTAG...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGACATGCATCATGGAATaGACAGGCTCCAAGAGCATC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRTCIME*TGSKSI
Trigger: GATGCTCTTGGAGCCTGTGCATTCCATGATGCATGT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTGATCCCATAAACCTCTaGCTGCTGCACAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPDPINL*LLHSLF
Trigger: GAAAAGGCTGTGCAGCAGGCAGAGGTTTATGGGATC...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATTGCTGTTGCTGCTGCTaGAAAGGCGTGGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYCCCCC*KGVVLR
Trigger: CCTCAAAACCACGCCTTTGCAGCAGCAGCAACAGCA...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTGCTGCTGTTGCTGCTaGTGCAAAGGCGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDCCCCC*CKGVVL
Trigger: CAAAACCACGCCTTTGCAGCAGCAGCAACAGCAGCA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGGCTGCTGCTGTTGCTaGTGCTGCAAAGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFGCCCC*CCKGVV
Trigger: AACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTCCTGGCCTCCAGGTTaGCTAAAACAGATATGCTCT +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSWPPG*LKQICS
Trigger: AGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCCACGTGGCAGCTACTaGAGTAATACCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLPRGSY*SNTTHC
Trigger: ACAGTGGGTGGTATTACTGCAGTAGCTGCCACGTGG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACGTTGTGGACTATGCGTaGTGGAATGAGAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHVVDYA*WNEKAV
Trigger: GACAGCTTTCTCATTCCAGCACGCATAGTCCACAAC...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATAGAAACTCCTTGGCCTaGTTCGACACCTTATACTTT +
Preference number: 4 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDRNSLA*FDTLYF
Trigger: AAAGTATAAGGTGTCGAAGCAGGCCAAGGAGTTTCT...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAGCATGGCGTTCTCCTaGTGGATGTCGATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYSMAFS*WMSMSG
Trigger: GCCGCTCATCGACATCCAGCAGGAGAACGCCATGCT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGACTTCTGCTTCTTCTaGAGCTCTCGGCGAACACAC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDDFCFF*SSRRTH
Trigger: GTGTGTTCGCCGAGAGCTGCAGAAGAAGCAGAAGTC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTTTGGTCACAGTGACTaGCACGTGCTCTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLFGHSD*HVLFQG
Trigger: CCCTTGGAAGAGCACGTGGCAGTCACTGTGACCAAA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATTTTCAAGCCTTGGTTaGGGCTACTGTATAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGFSSLG*GYCIVR
Trigger: TCTGACTATACAGTAGCCGCAACCAAGGCTTGAAAA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGTGAGTTGCTGTAGGTaGCTGAATCTTCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRVSCCR*LNLLLW
Trigger: CCAGAGTAGAAGATTCAGGCACCTACAGCAACTCAC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGACTCAGATGACTGCATaGCAAGGGACTCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGETQMTA*QGTPRK
Trigger: TTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGT...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACAATCCTTGATTTCCTaGGCCCCGGCTGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRQSLIS*APAATL
Trigger: GAGAGTAGCAGCCGGGGCCCAGGAAATCAAGGATTG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAACTTAGCCTCCTAAGCTaGTTCCAGAAATGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQLSLLS*FQKWLH
Trigger: ATGAAGCCATTTCTGGAACCAGCTTAGGAGGCTAAG...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGACCCTCCAGTCCACTTaGGTAATATCTGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPTLQST*VISDRD
Trigger: ATCACGATCAGATATTACCCAAGTGGACTGGAGGGT...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGGGCAACAGAAAAGATaGCCTGGTGACATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYGQQKR*PGDMRA
Trigger: GGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGTGAAAGCTGGTACGTaGCATAAAGGTTTTGATTCC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGVKAGT*HKGFDS
Trigger: GGAATCAAAACCTTTATGCCACGTACCAGCTTTCAC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCAAAACAGATATGCTCTaGAAGTGTGAAAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLKTDML*KCESWY
Trigger: GTACCAGCTTTCACACTTCCAGAGCATATCTGTTTT...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGCAGTATCCACCATCCTaGCCTCCAGGTTGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGEQYPPS*PPGCLK
Trigger: TTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTG...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTGTGGCAGCAGCCCACTaGTTTTCTTCTGGAAACTAT +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGVAAAH*FSSGNY
Trigger: ATAGTTTCCAGAAGAAAACCAGTGGGCTGCTGCCAC...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCTGTTTTGGTACTGTTTaGAGCTGTCCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFCFGTV*SCPGQG
Trigger: CCCCTGTCCTGGACAGCTCCAAACAGTACCAAAACA...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGAACTCCTCGCCACATTaGCAGCTATCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQNSSPH*QLSSEP
Trigger: AGGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTT...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGACCTATGGATCGCTaGCAGCCTGCACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRRPMDR*QPAHLK
Trigger: TTTCAAATGTGCAGGCTGCCAGCGATCCATAGGTCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCATTGGAAAGACCTATaGATCGCTGGCAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDHWKDL*IAGSLH
Trigger: GTGCAGGCTGCCAGCGATCCATAGGTCTTTCCAATG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCCTTGGCTTTCCCATTaGAAAGACCTATGGATCGCT +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHPWLSH*KDLWIA
Trigger: AGCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGG...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCGTGGACTATGCGTGCTaGAATGAGAAAGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSVDYAC*NEKAVI
Trigger: GATGACAGCTTTCTCATTCCAGCACGCATAGTCCAC...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGAAGTATCCCAGTTGTaGACTATGCGTGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHREVSQL*TMRAGM
Trigger: CATTCCAGCACGCATAGTCCACAACTGGGATACTTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTGAAGTATCCCAGTTGTaGACTATGCGTGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGEVSQL*TMRAGM
Trigger: CATTCCAGCACGCATAGTCCACAACTGGGATACTTC...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAAATGGCGTTCTCCTGCTaGATGTCGATGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKMAFSC*MSMSGS
Trigger: AGAGCCGCTCATCGACATCCAGCAGGAGAACGCCAT...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACGTGGTGGTACAGCATaGCGTTCTCCTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRRGGTA*RSPAGC
Trigger: ACATCCAGCAGGAGAACGCCATGCTGTACCACCACG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTGTCAGAGGGGGCTTaGCTCCTGTTTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLSEGA*LLFPAI
Trigger: GATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCAAGGGCACTGCAGCTaGAGAACACTACCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDQGHCS*RTLPAK
Trigger: TTTGGCAGGTAGTGTTCTCCAGCTGCAGTGCCCTTG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGAAGGCACTTTGCCATaGGAGCACATCTGTTTTATA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGEGTLP*EHICFI
Trigger: TATAAAACAGATGTGCTCCCATGGCAAAGTGCCTTC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCACGAGCAACAGCATTaGCTTGACTCTAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRHEQQH*LDSKGG
Trigger: TCCTCCTTTAGAGTCAAGCCAATGCTGTTGCTCGTG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAAGACGAACAGGCAGTaGCTTCTCTTTTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRKTNRQ*LLFSQG
Trigger: TCCCTGTGAAAAGAGAAGCCACTGCCTGTTCGTCTT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAAGGGAAGGCCAACATaGAGAAGGAGCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYKGRPT*RRSHRP
Trigger: GGGCCTGTGGCTCCTTCTCCATGTTGGCCTTCCCTT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTACTAATGCATGCTGCTaGTCATTTCTGCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVTNACC*SFLRRR
Trigger: TCTCCGCCGCAGAAATGACCAGCAGCATGCATTAGT...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTCATGATGGCTGTTGGTaGCATAGGTTTCTACCACTG +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGHDGCW*HRFLPL
Trigger: CAGTGGTAGAAACCTATGCCACCAACAGCCATCATG...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGCCAGGAAGGACACTGTaGAGATGGTTTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTEPGRTL*RWFVSA
Trigger: AGCAGAAACAAACCATCTCCACAGTGTCCTTCCTGG...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp ATCTTTCTGATCTGGCTTCCACAAAAGGCAGTGACTTaGTCCTTAGTGCCGCACATTTGCTGCCACATCCCG +
Preference number: 4 (lower is better)
Translates to: IFLIWLPQKAVT*SLVPHICCHIP
Trigger: CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGGAAGCCAGATCAGAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATTCTGCATTGTTTATTaGGAGAGAGAGAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGFCIVY*EREREN
Trigger: GTTCTCTCTCTCTCTCTCTCAATAAACAATGCAGAA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTCAGTGAGACCTCTGTaGAGACAACAGCAAGTACTT +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSVRPL*RQQQVL
Trigger: AAGTACTTGCTGTTGTCTTCACAGAGGTCTCACTGA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAAGAGATTATTCTTCAGTaGGACCTCTGTGAAGACAAC +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQEIILQ*DLCEDN
Trigger: GTTGTCTTCACAGAGGTCTCACTGAAGAATAATCTC...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCTGTCTGTTATGTTACTaGGTACCTCATGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFCLLCY*VPHAPP
Trigger: TGGTGGGGCATGAGGTACTCAGTAACATAACAGACA...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGCAAAGGCGTGGTTTTaGGGACTACCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYAKAWF*GLPSSP
Trigger: TGGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGCAAAGGCGTGGTTTTaGGGACTACCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFAKAWF*GLPSSP
Trigger: TGGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGGCCTTTAGCTGTAGCTaGGTGTTGTCATACAAAACA +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPAFSCS*VLSYKT
Trigger: TGTTTTGTATGACAACACTCAGCTACAGCTAAAGGC...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CCACAAAAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGAGAGAGTCCCTGATTTaGGGATGTTTTGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: PQKAVTLSLVPHICCHIPRESLI*GCFGTV
Trigger: AACAGTACCAAAACATCCTCAAATCAGGGACTCTCT...CGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTCCTGTAGAGAGTCCCTaGTTTGAGGATGTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGPVESP*FEDVLV
Trigger: TACCAAAACATCCTCAAATCAGGGACTCTCTACAGG...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGCACATTTGAAACTCTaGGCAGTGAGTCCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLAHLKL*AVSPRS
Trigger: GGAACGAGGACTCACTGCTCAGAGTTTCAAATGTGC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCTATGCGTGCTGGAATaGGAAAGCTGTCATCCACGT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLLCVLE*ESCHPR
Trigger: ACGTGGATGACAGCTTTCTCATTCCAGCACGCATAG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTCCTGCTGGATGTCGATaGGCGGCTCTTCGTACACGT +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPPAGCR*AALRTR
Trigger: ACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGG...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATTACAGGTGGATCTGTTaGAGGAGGTATTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYYRWIC*RRYSLG
Trigger: CCCCAGAGAATACCTCCTTCAACAGATCCACCTGTA...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCCCATCACTAACAAGTaGCACGGAGGCAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFPITNK*HGGRGN
Trigger: GTTTCCCCTGCCTCCGTGTCACTTGTTAGTGATGGG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACCCATCACTAACAAGTaGCACGGAGGCAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEPITNK*HGGRGN
Trigger: GTTTCCCCTGCCTCCGTGTCACTTGTTAGTGATGGG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGGATCCAGATTTAGTTaGAGGGTCCTGCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDGSRFS*RVLQAS
Trigger: TGAAGCCTGCAGGACCCTTCAACTAAATCTGGATCC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCAAAAACATTTAACATaGCTAATGCATGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLQKHLT*LMHAAG
Trigger: ACCAGCAGCATGCATTAGTCATGTTAAATGTTTTTG...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTACACAGTCATCTTTCTaGTCTGGCTTCCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGTQSSF*SGFHKR
Trigger: CCTTTTGTGGAAGCCAGATCAGAAAGATGACTGTGT...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCCACAGATCTCACTACTaGATAGGAGGAGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSHRSHY*IGGASK
Trigger: CTTTGATGCTCCTCCTATTCAGTAGTGAGATCTGTG...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTTACTGAGTACCTCATaGCCCACCAGTTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDLLSTS*PTSSGT
Trigger: AGTCCCTGAACTGGTGGGGCATGAGGTACTCAGTAA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAAATGGCTGCTGCTGTTaGTGCTGCTGCAAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEENGCCC*CCCKGV
Trigger: CACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTCTGGCTACAAAGACTaGAGCTGTACACGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLSGYKD*SCTRVR
Trigger: CCTCACACGTGTACAGCTGCAGTCTTTGTAGCCAGA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCAGGGCTGTCCTACCTaGCGTTTTGGTCACAGTGAC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFQGCPT*RFGHSD
Trigger: GTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGGGAGGAGATGGCACTaGACTTCAGGTCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRGRRWH*TSGLQM
Trigger: CATTTGGAGACCTGAAGTGCAGTGCCATCTCCTCCC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGGAGTTCACAGGGACTaGTCGTATTTAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEGVHRD*SYLAGP
Trigger: GGGCCCTGCTAAATACGAGCAGTCCCTGTGAACTCC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGGATACCACTTGTGTTaGAAACCACAGATCCCAAGT +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRGYHLC*KPQIPS
Trigger: ACTTGGGATCTGTGGTTTGCAACACAAGTGGTATCC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGAGTGCCTGGGTCTGCTaGAGGTCGGCAAGTGAATAC +
Preference number: 4 (lower is better)
Translates to: APGWSYITFYDLALEITWSAWVC*RSASEY
Trigger: GTATTCACTTGCCGACCTGCAGCAGACCCAGGCACT...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTTCATTGGGCTCCCTaGAGCAGGCCAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLHWAP*SRPNPK
Trigger: CTTTGGGTTTGGCCTGCTCCAGGGAGCCCAATGAAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATCAGCAATAGAGCTATaGAAACAACTGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGSAIEL*KQLEET
Trigger: GGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGAGCTGGTTCCAGAAATaGCTTCATGAACATTCACCC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSWFQK*LHEHSP
Trigger: GGGTGAATGTTCATGAAGCCATTTCTGGAACCAGCT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTCCAGGTTGTCCATCTaGACAGCCAGACACACGTCC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFSRLSI*TARHTS
Trigger: GGACGTGTGTCTGGCTGTCCAGATGGACAACCTGGA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAACTCCTCGCCACATTaGCAGCTATCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDNSSPH*QLSSEP
Trigger: AGGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCAGACCTATGGATCGCTaGCAGCCTGCACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFRPMDR*QPAHLK
Trigger: TTTCAAATGTGCAGGCTGCCAGCGATCCATAGGTCT...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAACATTGGAAAGACCTATaGATCGCTGGCAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKHWKDL*IAGSLH
Trigger: GTGCAGGCTGCCAGCGATCCATAGGTCTTTCCAATG...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGGTGGACTATGCGTGCTaGAATGAGAAAGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGEVDYAC*NEKAVI
Trigger: GATGACAGCTTTCTCATTCCAGCACGCATAGTCCAC...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGACCTTGCCCAAGAATaGAGCCAGCTTTCCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLDLAQE*SQLSLY
Trigger: ATAGAGGGAAAGCTGGCTCCATTCTTGGGCAAGGTC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGCCTGGAAAACACGGTaGAGCGTCACATCATTAGGT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLAWKTR*SVTSLG
Trigger: ACCTAATGATGTGACGCTCCACCGTGTTTTCCAGGC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGTTAAGGGGAAGGAATaGGAGCTGTCAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYVKGKE*ELSGSQ
Trigger: CTGGGACCCTGACAGCTCCCATTCCTTCCCCTTAAC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGAAACCAGGCAGTATTaGAATCAGGAGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRETRQY*NQEVKI
Trigger: GATCTTCACCTCCTGATTCCAATACTGCCTGGTTTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGATCCTTCAATCATCTGTaGATCAGGTTAGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRSFNHL*IRLDLA
Trigger: AGCCAAATCTAACCTGATCCACAGATGATTGAAGGA...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACGTCATCTTTCTGATCTaGCTTCCACAAAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHVIFLI*LPQKAV
Trigger: CACTGCCTTTTGTGGAAGCCAGATCAGAAAGATGAC...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGAATCTGCCACACACTTaGTCAGATGTATTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTENLPHT*SDVFPK
Trigger: CTTGGGGAATACATCTGACCAAGTGTGTGGCAGATT...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGATGTAAGAAAGACATGTaGGATGGAAGATACTGTTGC +
Preference number: 4 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRCKKDM*DGRYCC
Trigger: GCAACAGTATCTTCCATCCCACATGTCTTTCTTACA...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATGCAGCTGGAATCATGTaGGGCTGTCTTCACTCATCT +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNAAGIM*GCLHSS
Trigger: AGATGAGTGAAGACAGCCCCACATGATTCCAGCTGC...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTCCAGGAAGGACACTGTaGAGATGGTTTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVPGRTL*RWFVSA
Trigger: AGCAGAAACAAACCATCTCCACAGTGTCCTTCCTGG...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAGCCAAAGCCTAATTTaGTGGCTCAGTGGACACACA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDSQSLI*WLSGHT
Trigger: TGTGTGTCCACTGAGCCATCAAATTAGGCTTTGGCT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCGGTCCCTCCGACGCTaGCAGATATTGAAGAAATTA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDRSLRR*QILKKL
Trigger: TAATTTCTTCAATATCTGTCAGCGTCGGAGGGACCG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATCGGTCCCTCCGACGCTaGCAGATATTGAAGAAATTA +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYRSLRR*QILKKL
Trigger: TAATTTCTTCAATATCTGTCAGCGTCGGAGGGACCG...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGAGCATGCCCTGGCTTaGAAGTTGAGGTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEEHALA*KLRSHP
Trigger: TGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTATGCTCTGGAAGTGTaGAAGCTGGTACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDYALEV*KLVRGI
Trigger: TATGCCACGTACCAGCTTTCACACTTCCAGAGCATA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGGCCTTTAGCTGTAGCTaGGTGTTGTCATACAAAACA +
Preference number: 4 (lower is better)
Translates to: LSLPEGLELAPGILISTEAFSCS*VLSYKT
Trigger: TGTTTTGTATGACAACACTCAGCTACAGCTAAAGGC...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTTGCAGGTTTTGCTCTaGACTCCTCGCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYLQVLL*TPRHIG
Trigger: GCCAATGTGGCGAGGAGTTCAGAGCAAAACCTGCAA...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATCATGCCCACCCATTTaGTCCTTGGGTTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRSCPPI*SLGLFL
Trigger: GAGGAACAAACCCAAGGATCAAATGGGTGGGCATGA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGCAGCTGTACACGTGTaGGGTGGCAAATTTAATGAC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDAAVHV*GGKFND
Trigger: GTCATTAAATTTGCCACCTCACACGTGTACAGCTGC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAGCCCTCCTCATAAATaGGGGGTGTATGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDSPPHK*GVYAFC
Trigger: ACAGAAAGCATACACCCCTCATTTATGAGGAGGGCT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGAGGAGGAAAGGAGATaGTCAAATTTGTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHREEERR*SNLFAC
Trigger: ACAGGCAAACAAATTTGATCATCTCCTTTCCTCCTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAAGCTCCTAACTAGGTaGCCCTTTAGCACTACAGAC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDKLLTR*PFSTTD
Trigger: GTCTGTAGTGCTAAAGGGTCACCTAGTTAGGAGCTT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGAAGCCAAGCCTCTCTaGGGAGGCACAGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYEAKPL*GGTEKN
Trigger: GTTCTTTTCTGTGCCTCCTCAGAGAGGCTTGGCTTC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCCAAAAACATTTAACATaGCTAATGCATGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGQKHLT*LMHAAG
Trigger: ACCAGCAGCATGCATTAGTCATGTTAAATGTTTTTG...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTACTCTCCATTCACCTaGGGGGCCTTCAGTCCGCTC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSYSPFT*GAFSPL
Trigger: GAGCGGACTGAAGGCCCCGCAGGTGAATGGAGAGTA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGATCGTGATCGAGCATaGCCTGGCTTGAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRDRDRA*PGLKVE
Trigger: CTCAACTTTCAAGCCAGGGCATGCTCGATCACGATC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAATGTTTGGGAATGTCTaGTTGTGTTCAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGMFGNV*LCSVFP
Trigger: AGGAAATACTGAACACAAGCAGACATTCCCAAACAT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGGATCGCTGGCAGCCTaGACATTTGAAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYGSLAA*TFETLS
Trigger: GCTCAGAGTTTCAAATGTGCAGGCTGCCAGCGATCC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACCACGTGGCAGCTACTaGAGTAATACCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEPRGSY*SNTTHC
Trigger: ACAGTGGGTGGTATTACTGCAGTAGCTGCCACGTGG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEILCHR*PAAEQI
Trigger: TATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGAT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACCCTCTATTACCTGCTaGAGGTCGGCAAGTGAATAC +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRPSITC*RSASEY
Trigger: GTATTCACTTGCCGACCTGCAGCAGGTAATAGAGGG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAATGATGATGGGTGCCTaGCTCAGTTACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEMMMGA*LSYLSL
Trigger: GAGGCTGAGGTAACTGAGGCAGGCACCCATCATCAT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTTTTCAAGCCTTGGTTaGGGCTACTGTATAGTCAGA +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRFSSLG*GYCIVR
Trigger: TCTGACTATACAGTAGCCGCAACCAAGGCTTGAAAA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAGGGAGAAGGCACTTTaGCATGGGAGCACATCTGTT +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRREKAL*HGSTSV
Trigger: AACAGATGTGCTCCCATGGCAAAGTGCCTTCTCCCT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAGAGGAAATTCTGTATaGAGGGCAAACATGTTACAA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGRGNSV*RANMLQ
Trigger: TTGTAACATGTTTGCCCTGCATACAGAATTTCCTCT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGGAGTTCACAGGGACTaGTCGTATTTAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEGVHRD*SYLAGP
Trigger: GGGCCCTGCTAAATACGAGCAGTCCCTGTGAACTCC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGTAAGGGCGTTCATGTaGGCCAAGGTATTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYVRAFM*AKVFWA
Trigger: AGCCCAGAATACCTTGGCGCACATGAACGCCCTTAC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGCCTTCCTGCCGCGGTaGAAAATGAGGTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDAFLPR*KMRSIL
Trigger: TAAAATAGACCTCATTTTGCACCGCGGCAGGAAGGC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACTGCTAACGCCCCTCTaGAGAAAATGTTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRLLTPL*RKCSVC
Trigger: GCACACTGAACATTTTCTGCAGAGGGGCGTTAGCAG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAGGGGAAACAGAGAGTaGCGCTACCGATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFRGNRE*RYRFRS
Trigger: TGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGGAGTTGCTGTGAGTTaGTGTAGGTGCCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDGVAVS*CRCLNL
Trigger: AAGATTCAGGCACCTACAGCAACTCACAGCAACTCC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAATTTGATGGCTCAGTaGACACACAAAGCTAATTTG +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGNLMAQ*THKANL
Trigger: CAAATTAGCTTTGTGTGTCCACTGAGCCATCAAATT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCAATCCTTGATTTCCTaGGCCCCGGCTGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEQSLIS*APAATL
Trigger: GAGAGTAGCAGCCGGGGCCCAGGAAATCAAGGATTG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATGGGGTTGTCCCTCTCTaGACCATAAACTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNGVVPL*TINCSL
Trigger: CAAAGAACAGTTTATGGTCCAGAGAGGGACAACCCC...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGGGCAACAGAAAAGATaGCCTGGTGACATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLGQQKR*PGDMRA
Trigger: GGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAAAAAACAGATATGCTCTaGAAGTGTGAAAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GLSSLISLVADDRCQLEQKTDML*KCESWY
Trigger: GTACCAGCTTTCACACTTCCAGAGCATATCTGTTTT...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAACTCCTCGCCACATTaGCAGCTATCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRNSSPH*QLSSEP
Trigger: AGGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATTGGAAAGACCTATaGATCGCTGGCAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: APGWSYITFYDLALEITWHWKDL*IAGSLH
Trigger: GTGCAGGCTGCCAGCGATCCATAGGTCTTTCCAATG...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCCTTGGCTTTCCCATTaGAAAGACCTATGGATCGCT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLPWLSH*KDLWIA
Trigger: AGCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTTGTAGTTGCACACCTTaGCTTTCCCATTGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPCSCTP*LSHWKD
Trigger: GTCTTTCCAATGGGAAAGCCAAGGTGTGCAACTACA...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGTGGACTATGCGTGCTaGAATGAGAAAGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDVDYAC*NEKAVI
Trigger: GATGACAGCTTTCTCATTCCAGCACGCATAGTCCAC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATACTCCAGAAACTCCTTaGCCTGCTTCGACACCTTAT +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNTPETP*PASTPY
Trigger: ATAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGT...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGTGAAATGTGTGGCCTaGGGCCAAAGGAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYVKCVA*GQRNWC
Trigger: ACACCAGTTCCTTTGGCCCCAGGCCACACATTTCAC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACACCAAGCTGTCAGGGTaGTACGAAAAGGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDTKLSG*YEKERK
Trigger: TTTCCTCTCCTTTTCGTACCACCCTGACAGCTTGGT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAAGCAGGTATTAGTTTaGTCTGAAAGAGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGKQVLV*SERGGN
Trigger: ATTACCACCTCTTTCAGACCAAACTAATACCTGCTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGACGTATTCCCTTCTTaGTGGAGGCCTACTCTAGAA +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLDVFPS*WRPTLE
Trigger: TTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAATGTTCAGTGTGCGTaGCATCGTGCTAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFNVQCA*HRASPT
Trigger: GGTGGGACTAGCACGATGCCACGCACACTGAACATT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTGAGCCACCAATCCTaGCCAAGTGGAACCCACTTT +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVSHQS*PSGTHF
Trigger: AAAGTGGGTTCCACTTGGCCAGGATTGGTGGCTCAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAGTCTCCCAAGTAGCTaGGATTATAGGCATCCACCA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDSLPSS*DYRHPP
Trigger: TGGTGGATGCCTATAATCCCAGCTACTTGGGAGACT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGGTCATCTTTCTGATCTaGCTTCCACAAAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQVIFLI*LPQKAV
Trigger: CACTGCCTTTTGTGGAAGCCAGATCAGAAAGATGAC...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAATCACCTTTTATGACTTaGCTTTGGAAATCACATGGC +
Preference number: 4 (lower is better)
Translates to: GLSSLISLVADDRCQLEQSPFMT*LWKSHG
Trigger: GCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGA...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTCAGTGAGACCTCTGTaGAGACAACAGCAAGTACTT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDSVRPL*RQQQVL
Trigger: AAGTACTTGCTGTTGTCTTCACAGAGGTCTCACTGA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATTCAGTGAGACCTCTGTaGAGACAACAGCAAGTACTT +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNSVRPL*RQQQVL
Trigger: AAGTACTTGCTGTTGTCTTCACAGAGGTCTCACTGA...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGGAGATTATTCTTCAGTaGGACCTCTGTGAAGACAAC +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGEEIILQ*DLCEDN
Trigger: GTTGTCTTCACAGAGGTCTCACTGAAGAATAATCTC...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCTTCTATCTTATTTGGTaGGGGCAACAGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSFYLIW*GQQKRW
Trigger: CCATCTTTTCTGTTGCCCTCACCAAATAAGATAGAA...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTATGGCCAAGCCCTGGTaGGATTGTCAGCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPMAKPW*DCQLIL
Trigger: CAGAATGAGCTGACAATCTCACCAGGGCTTGGCCAT...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTTGCAGGTTTTGCTCTaGACTCCTCGCCACATTGGC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAELQVLL*TPRHIG
Trigger: GCCAATGTGGCGAGGAGTTCAGAGCAAAACCTGCAA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCTATGCGTGCTGGAATaGGAAAGCTGTCATCCACGT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYLCVLE*ESCHPR
Trigger: ACGTGGATGACAGCTTTCTCATTCCAGCACGCATAG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTACAGGTGGATCTGTTaGAGGAGGTATTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFYRWIC*RRYSLG
Trigger: CCCCAGAGAATACCTCCTTCAACAGATCCACCTGTA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAACCATGGGCACCCGTTaGAAACTGTTAAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRTMGTR*KLLRKP
Trigger: TGGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGTTGAGCTATTAAGGTaGAATGTGTGGCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEVELLR*NVWPGA
Trigger: GGCCCCAGGCCACACATTTCACCTTAATAGCTCAAC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAAAAGTAAGCTACAGTaGCAGGGAGCTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSKSKLQ*QGAGGG
Trigger: TCCGCCCCCAGCTCCCTGTCACTGTAGCTTACTTTT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGTTGCTGTAGGTGCCTaGATCTTCTACTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYVAVGA*IFYSGQ
Trigger: TTGCCCAGAGTAGAAGATTCAGGCACCTACAGCAAC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTTGCTGTAGGTGCCTaGATCTTCTACTCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVAVGA*IFYSGQ
Trigger: TTGCCCAGAGTAGAAGATTCAGGCACCTACAGCAAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGGATCCAGATTTAGTTaGAGGGTCCTGCAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFGSRFS*RVLQAS
Trigger: TGAAGCCTGCAGGACCCTTCAACTAAATCTGGATCC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCCCAACCAAGAGGGGTaGTTCAGCAATAGAGCTATG +
Preference number: 4 (lower is better)
Translates to: APGWSYITFYDLALEITWPNQEG*FSNRAM
Trigger: CATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGG...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTGGTTTCTAAGAGCCTaGTCTTACAGTGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDWFLRA*SYSGPK
Trigger: TTTGGGACCACTGTAAGAGCAGGCTCTTAGAAACCA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATTGGTTTCTAAGAGCCTaGTCTTACAGTGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNWFLRA*SYSGPK
Trigger: TTTGGGACCACTGTAAGAGCAGGCTCTTAGAAACCA...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGGTTTTGATTCCCACTaGTGTCGAGGCTGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRGFDSH*CRGCRS
Trigger: ACTTCTACAGCCTCGACAGCAGTGGGAATCAAAACC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCACCACCCACTGTAGTTaGACACCTTGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFTTHCS*TPWLSH
Trigger: ATGGGAAAGCCAAGGTGTGCAACTACAGTGGGTGGT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGAGAAACTCCTTGGCCTaGTTCGACACCTTATACTTT +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQRNSLA*FDTLYF
Trigger: AAAGTATAAGGTGTCGAAGCAGGCCAAGGAGTTTCT...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACACAGATGATGATGGGTaGCTGCCTCAGTTACCTCAG +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYTDDDG*LPQLPQ
Trigger: CTGAGGTAACTGAGGCAGGCACCCATCATCATCTGT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAACAGATGATGATGGGTaGCTGCCTCAGTTACCTCAG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEETDDDG*LPQLPQ
Trigger: CTGAGGTAACTGAGGCAGGCACCCATCATCATCTGT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCTGGAGAACACTACCTaGCAAATAGCAAAGCAGATC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDLENTT*QIAKQI
Trigger: GATCTGCTTTGCTATTTGGCAGGTAGTGTTCTCCAG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAATTTGTTTGCCTGTTaGCAAGTGTTTGAGATTTTC +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGNLFAC*QVFEIF
Trigger: GAAAATCTCAAACACTTGGCAACAGGCAAACAAATT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCTTCAGGTCTCCAAATaGAGTGTGCTAGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYLQVSK*SVLGMA
Trigger: GGCCATTCCTAGCACACTGCATTTGGAGACCTGAAG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGTAAGGGCGTTCATGTaGGCCAAGGTATTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEVRAFM*AKVFWA
Trigger: AGCCCAGAATACCTTGGCGCACATGAACGCCCTTAC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATACTGCGGGGTTAGATaGCAACATTTCACCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRYCGVR*QHFTRV
Trigger: AACCCTGGTGAAATGTTGGCATCTAACCCCGCAGTA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATTAGTTGAAGGGTCCTaGAGGCTTCAAGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRLVEGS*RLQVVQ
Trigger: CTGAACCACTTGAAGCCTGCAGGACCCTTCAACTAA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCATGACTAATGCATGCTaGTGGTCATTTCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCMTNAC*WSFLRR
Trigger: CCGCCGCAGAAATGACCAGCAGCATGCATTAGTCAT...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATAACATGACTAATGCATaGTGCTGGTCATTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYNMTNA*CWSFLR
Trigger: CCGCAGAAATGACCAGCAGCATGCATTAGTCATGTT...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACTTGCAAAATACAATCTaGCACACACTTGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHLQNTI*HTLGQM
Trigger: CATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAA...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATTCCCACTTCTTATTTaGAAAACAGGTGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGFPLLI*KTGGKI
Trigger: TATTTTGCCACCTGTTTTCCAAATAAGAAGTGGGAA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTTCAGCAATAGAGCTATaGAAACAACTGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGSAIEL*KQLEET
Trigger: GGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGA...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATAGCTGGTTCCAGAAATaGCTTCATGAACATTCACCC +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYSWFQK*LHEHSP
Trigger: GGGTGAATGTTCATGAAGCCATTTCTGGAACCAGCT...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCTTAGCCTCCTAAGCTaGTTCCAGAAATGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLLSLLS*FQKWLH
Trigger: ATGAAGCCATTTCTGGAACCAGCTTAGGAGGCTAAG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGACCCTCCAGTCCACTTaGGTAATATCTGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLTLQST*VISDRD
Trigger: ATCACGATCAGATATTACCCAAGTGGACTGGAGGGT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCGTGAAAGCTGGTACGTaGCATAAAGGTTTTGATTCC +
Preference number: 4 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFVKAGT*HKGFDS
Trigger: GGAATCAAAACCTTTATGCCACGTACCAGCTTTCAC...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATCTGGTAGTCACAGATTaGCGTTTGTTCTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLISLVADDRCQLEQLPYLVVTD*RLFFLS
Trigger: ACTCAGGAAGAACAAACGCCAATCTGTGACTACCAG...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAAGACCTATGGATCGCTaGCAGCCTGCACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRRPMDR*QPAHLK
Trigger: TTTCAAATGTGCAGGCTGCCAGCGATCCATAGGTCT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCATGGCGTTCTCCTGCTaGATGTCGATGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSMAFSC*MSMSGS
Trigger: AGAGCCGCTCATCGACATCCAGCAGGAGAACGCCAT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTAGCGGCTCTGCGTGGTaGTACAGCATGGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSSGSAW*YSMAFS
Trigger: GGAGAACGCCATGCTGTACCACCACGCAGAGCCGCT...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGACCTTGCCCAAGAATaGAGCCAGCTTTCCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEDLAQE*SQLSLY
Trigger: ATAGAGGGAAAGCTGGCTCCATTCTTGGGCAAGGTC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGCCACAGAGGTTCTGTaGATCGTCTGGACAATGATG +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYATEVL*IVWTMM
Trigger: CATCATTGTCCAGACGATCCACAGAACCTCTGTGGC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGGCCTCGCTGACAGTTaGAATCACGGATACATTAAT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLGLADS*NHGYIN
Trigger: ATTAATGTATCCGTGATTCCAACTGTCAGCGAGGCC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCACCCAACTCCTAAGCTaGCTCCACTCTGTCCTATCA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFTQLLS*LHSVLS
Trigger: TGATAGGACAGAGTGGAGCCAGCTTAGGAGTTGGGT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTGGAAAAAGCGGGCCTaGAAAGAACACTACCCCCAT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFWKKRA*KEHYPH
Trigger: ATGGGGGTAGTGTTCTTTCCAGGCCCGCTTTTTCCA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCAGCTGTCCTCTAGCTaGTTTATTAGCCATGAGGCC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYQLSSS*FISHEA
Trigger: GGCCTCATGGCTAATAAACCAGCTAGAGGACAGCTG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCAGCTGTCCTCTAGCTaGTTTATTAGCCATGAGGCC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFQLSSS*FISHEA
Trigger: GGCCTCATGGCTAATAAACCAGCTAGAGGACAGCTG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTCTGAGGGGCTCGAGTTaGCTCCTGGAATCCTTATCT +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPLRGSS*LLESLS
Trigger: AGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAG...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAATTTATGACTTGGCTTTaGAAATCACATGGCATCACT +
Preference number: 4 (lower is better)
Translates to: STELLLTWATGLSIHHSQFMTWL*KSHGIT
Trigger: AGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAA...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAACTTCACTCATCTCTCTaGTGGCTGATGATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQLHSSL*WLMIAA
Trigger: GGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAG...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp GGCATAGTCCCTTTTCAGGAGTCTGAGGGATACCACTaGTGTTGCAAACCACAGATCCCAAGTATTAGACGT +
Preference number: 4 (lower is better)
Translates to: GIVPFQESEGYH*CCKPQIPSIRR
Trigger: ACGTCTAATACTTGGGATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGGACTATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp CAGGGAAAATCCAAAGCAAAACAGCAGTTGTCTCACTaGAGTTTAGCAATGCTTTCCATCACACCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: QGKSKAKQQLSH*SLAMLSITPAA
Trigger: GGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAACTGCTGTTTTGCTTTGGATTTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp GTGCAAAACAACCATTTTATTATGGGCTCACACATTTaGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTG +
Preference number: 4 (lower is better)
Translates to: VQNNHFIMGSHI*SVGQDSRKDTV
Trigger: CACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCCATAATAAAATGGTTGTTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCCAAGAGCATCTATATaGAGAGTAGCCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFPRASI*RVASRE
Trigger: TTCCCTGCTGGCTACTCTTCATATAGATGCTCTTGG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGCCTTGGTGACATCATaGCATTCCCCTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEALVTS*HSPEFG
Trigger: ACCAAACTCAGGGGAATGTCATGATGTCACCAAGGC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTACCCATTGGCCTTGGTaGCATCATGACATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLTHWPW*HHDIPL
Trigger: CAGGGGAATGTCATGATGTCACCAAGGCCAATGGGT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTGACCAAATGTTCCTTTaGGATTATTCTTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGDQMFL*DYSSVR
Trigger: TCTCACTGAAGAATAATCTCAAAGGAACATTTGGTC...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTGTCTGTTATGTTACTaGGTACCTCATGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFCLLCY*VPHAPP
Trigger: TGGTGGGGCATGAGGTACTCAGTAACATAACAGACA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTTCATGCCCACCCATTTaGTCCTTGGGTTTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPSCPPI*SLGLFL
Trigger: GAGGAACAAACCCAAGGATCAAATGGGTGGGCATGA...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTGGATTGTTGATTGGTaGATCCCTGGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLWIVDW*IPGLRV
Trigger: GACCCGAAGGCCAGGGATTCACCAATCAACAATCCA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAGCCCTCCTCATAAATaGGGGGTGTATGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFSPPHK*GVYAFC
Trigger: ACAGAAAGCATACACCCCTCATTTATGAGGAGGGCT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGGACGATCTCACACATaGGTTTCTGGCACTTTTAGG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEGRSHT*VSGTFR
Trigger: CCTAAAAGTGCCAGAAACTCATGTGTGAGATCGTCC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTACCCCCATTCCAGTTaGCGGCTTTTTAAGTACTTT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLYPHSS*RLFKYF
Trigger: AAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAGCAAAGGGGGCTGCTaGGAGTTTACATGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFSKGGC*EFTWFS
Trigger: TGAAAACCATGTAAACTCTCAGCAGCCCCCTTTGCT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAAGCAAAGGGGGCTGCTaGGAGTTTACATGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEESKGGC*EFTWFS
Trigger: TGAAAACCATGTAAACTCTCAGCAGCCCCCTTTGCT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTCAGGGTCGGAAGAGTaGTACAAGGTGTGCAACATA +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFSGSEE*YKVCNI
Trigger: TATGTTGCACACCTTGTATCACTCTTCCGACCCTGA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATGGTTTCTAAGAGCCTaGTCTTACAGTGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRWFLRA*SYSGPK
Trigger: TTTGGGACCACTGTAAGAGCAGGCTCTTAGAAACCA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTGCTGTTGCTGCTGCTaGAAAGGCGTGGTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSCCCCC*KGVVLR
Trigger: CCTCAAAACCACGCCTTTGCAGCAGCAGCAACAGCA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGATGTTTGGGAATGTCTaGTTGTGTTCAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRMFGNV*LCSVFP
Trigger: AGGAAATACTGAACACAAGCAGACATTCCCAAACAT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTACCACCCACTGTAGTTaGACACCTTGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPTTHCS*TPWLSH
Trigger: ATGGGAAAGCCAAGGTGTGCAACTACAGTGGGTGGT...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTCTGGCTACAAAGACTaGAGCTGTACACGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAESGYKD*SCTRVR
Trigger: CCTCACACGTGTACAGCTGCAGTCTTTGTAGCCAGA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGACAGCTCGAACATGGTaGAAGCCTCCTCTAGACTCT +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAETARTW*KPPLDS
Trigger: AGAGTCTAGAGGAGGCTTGCACCATGTTCGAGCTGT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAGGGAGAAGGCACTTTaGCATGGGAGCACATCTGTT +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEREKAL*HGSTSV
Trigger: AACAGATGTGCTCCCATGGCAAAGTGCCTTCTCCCT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGCCTTCCTGCCGCGGTaGAAAATGAGGTCTATTTTA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYAFLPR*KMRSIL
Trigger: TAAAATAGACCTCATTTTGCACCGCGGCAGGAAGGC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAGGGGAAACAGAGAGTaGCGCTACCGATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLRGNRE*RYRFRS
Trigger: TGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTGAGTTGCTGTAGGTaGCTGAATCTTCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVSCCR*LNLLLW
Trigger: CCAGAGTAGAAGATTCAGGCACCTACAGCAACTCAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAGAGAGAGGCTGGTTTaGAGCTTCACGGCCAATAGG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSRERLV*SFTANR
Trigger: CCTATTGGCCGTGAAGCTGCAAACCAGCCTCTCTCT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATTTGCAAAATACAATCTaGCACACACTTGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHLQNTI*HTLGQM
Trigger: CATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAA...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCAGTATCCACCATCCTaGCCTCCAGGTTGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEQYPPS*PPGCLK
Trigger: TTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTTGTTTTGGTACTGTTTaGAGCTGTCCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPCFGTV*SCPGQG
Trigger: CCCCTGTCCTGGACAGCTCCAAACAGTACCAAAACA...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGATTTGAGGATGTTTTaGTACTGTTTGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDDLRMF*YCLELS
Trigger: GGACAGCTCCAAACAGTACCAAAACATCCTCAAATC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCAGACCTATGGATCGCTaGCAGCCTGCACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCRPMDR*QPAHLK
Trigger: TTTCAAATGTGCAGGCTGCCAGCGATCCATAGGTCT...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCCTTGGCTTTCCCATTaGAAAGACCTATGGATCGCT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFPWLSH*KDLWIA
Trigger: AGCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATGTAGTTGCACACCTTaGCTTTCCCATTGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKCSCTP*LSHWKD
Trigger: GTCTTTCCAATGGGAAAGCCAAGGTGTGCAACTACA...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAGGACAGCTCGAACATaGTGCAAGCCTCCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLRTART*CKPPLD
Trigger: GTCTAGAGGAGGCTTGCACCATGTTCGAGCTGTCCT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAACAACACGCAGTTATTaGTCGCAGAGGTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRTTRSY*SQRFLL
Trigger: GAGAAGAAACCTCTGCGACCAATAACTGCGTGTTGT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACGTCACATCATTAGGTaGGTGATGGGATTAGTACCG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEERHIIR*VMGLVP
Trigger: CGGTACTAATCCCATCACCCACCTAATGATGTGACG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGACCCAACTCCTAAGCTaGCTCCACTCTGTCCTATCA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAETQLLS*LHSVLS
Trigger: TGATAGGACAGAGTGGAGCCAGCTTAGGAGTTGGGT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGTCTATTTTAGGAACTaGCTTCTTTACTGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDVYFRN*LLYCGV
Trigger: AACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGAC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGACGTATTCCCTTCTTaGTGGAGGCCTACTCTAGAA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYDVFPS*WRPTLE
Trigger: TTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAATTCGGCAACTAGGGTaGTGTAAACACCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEIRQLG*CKHLGS
Trigger: AGATCCGAGGTGTTTACACCACCCTAGTTGCCGAAT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGACAAACTCCCAGGTTTaGAAGCCAAGCCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAETNSQV*KPSLSE
Trigger: CTCAGAGAGGCTTGGCTTCCAAACCTGGGAGTTTGT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAATGTTCAGTGTGCGTaGCATCGTGCTAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSNVQCA*HRASPT
Trigger: GGTGGGACTAGCACGATGCCACGCACACTGAACATT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACACGAGCAACAGCATTaGCTTGACTCTAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEHEQQH*LDSKGG
Trigger: TCCTCCTTTAGAGTCAAGCCAATGCTGTTGCTCGTG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTTAGTCACCCATCACTaGATTCGACCTCGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAELVTHH*IRPRAD
Trigger: GTCTGCTCGAGGTCGAATCCAGTGATGGGTGACTAA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCATTTTTGGCCCGGCTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLHFWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGCCGGGCCAAAAATG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCTGAATCTTCTACTCTaGGCAACAACCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLLNLLL*ATTSFI
Trigger: AATGAAGCTGGTTGTTGCCCAGAGTAGAAGATTCAG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCCATGATGGCTGTTGGTaGCATAGGTTTCTACCACTG +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCHDGCW*HRFLPL
Trigger: CAGTGGTAGAAACCTATGCCACCAACAGCCATCATG...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGTCACCTTTTATGACTTaGCTTTGGAAATCACATGGC +
Preference number: 4 (lower is better)
Translates to: WKSHGITSIVTDLPKFGESPFMT*LWKSHG
Trigger: GCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGA...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTGCAGCTGGAATCATGTaGGGCTGTCTTCACTCATCT +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPAAGIM*GCLHSS
Trigger: AGATGAGTGAAGACAGCCCCACATGATTCCAGCTGC...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ATCCTTATCTCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACACAACCATTTTATTATaGGCTCACACATTTTGTCGG +
Preference number: 4 (lower is better)
Translates to: ILISTELLLTWATGLSIHTTILL*AHTFCR
Trigger: CCGACAAAATGTGTGAGCCCATAATAAAATGGTTGT...GTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGAGATAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp AAATGTGTGGCCTGGGGCCAAAGGAACTGGTGTGGGTaGAGAGGTAAAATGCTTACATCTAACTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: KCVAWGQRNWCG*RGKMLTSNCTK
Trigger: TTTTGTGCAGTTAGATGTAAGCATTTTACCTCTCAACCCACACCAGTTCCTTTGGCCCCAGGCCACACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp TTTACTGCGGGGTTAGATGCCAACATTTCACCAGGGTaGGACGATCTCACACATGAGTTTCTGGCACTTTTA +
Preference number: 4 (lower is better)
Translates to: FTAGLDANISPG*DDLTHEFLALL
Trigger: TAAAAGTGCCAGAAACTCATGTGTGAGATCGTCCAACCCTGGTGAAATGTTGGCATCTAACCCCGCAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp TCAGGTCACGCAAAGGAGGGAGGCTCTTTCAAGGTCTaGCTCCAACTTCACGTTTTCACATTATTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGHAKEGGSFKV*LQLHVFTLFQS
Trigger: ACTCTGAAATAATGTGAAAACGTGAAGTTGGAGCAAGACCTTGAAAGAGCCTCCCTCCTTTGCGTGACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGACGTGTTTCCGACATaGTTCCCTTTACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSDVFPT*FPLLLR
Trigger: CCTCAGGAGTAAAGGGAATCATGTCGGAAACACGTC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGCCTTGGTGACATCATaGCATTCCCCTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLALVTS*HSPEFG
Trigger: ACCAAACTCAGGGGAATGTCATGATGTCACCAAGGC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATGACCAAATGTTCCTTTaGGATTATTCTTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHDQMFL*DYSSVR
Trigger: TCTCACTGAAGAATAATCTCAAAGGAACATTTGGTC...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAACTTCTAAGGCTGGGCTaGTATCATCCACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQLLRLG*YHPLPK
Trigger: CTTTGGAAGTGGATGATATCAGCCCAGCCTTAGAAG...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTTCTATCTTATTTGGTaGGGGCAACAGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDFYLIW*GQQKRW
Trigger: CCATCTTTTCTGTTGCCCTCACCAAATAAGATAGAA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCACATTTGAAACTCTaGGCAGTGAGTCCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSAHLKL*AVSPRS
Trigger: GGAACGAGGACTCACTGCTCAGAGTTTCAAATGTGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACGACACCTTATACTTTaGAGTATCCCAGTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEERHLIL*SIPVVD
Trigger: GTCCACAACTGGGATACTTCAAAGTATAAGGTGTCG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGTACCAAGTATGTTGTaGGCCACTGATCCTAATAGC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFVPSML*ATDPNS
Trigger: GCTATTAGGATCAGTGGCTCACAACATACTTGGTAC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGAAAATAAGCAGAAAATaGTGTGGGTGGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLKISRK*CGWKVL
Trigger: GAGGACTTTCCACCCACATCATTTTCTGCTTATTTT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCCCTTTTCAGGAGTCTaGGGGATACCACTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLPFSGV*GIPLVL
Trigger: CAACACAAGTGGTATCCCTCAGACTCCTGAAAAGGG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCACACAGTCATCTTTCTaGTCTGGCTTCCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCTQSSF*SGFHKR
Trigger: CCTTTTGTGGAAGCCAGATCAGAAAGATGACTGTGT...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTCTGTGGCTAGCTCAATaGTTGGCACACAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPLWLAQ*LAHRKH
Trigger: ATGCTTTCTGTGTGCCAATCATTGAGCTAGCCACAG...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGTGAGAGTTCTGACATaGATCATGGAATGCACAGGC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEVRVLT*IMECTG
Trigger: GCCTGTGCATTCCATGATGCATGTCAGAACTCTCAC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCCCAACCAAGAGGGGTaGTTCAGCAATAGAGCTATG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSPNQEG*FSNRAM
Trigger: CATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGATCCCATAAACCTCTaGCTGCTGCACAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLDPINL*LLHSLF
Trigger: GAAAAGGCTGTGCAGCAGGCAGAGGTTTATGGGATC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ATCAAACTGAATAGAAATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATTTACTGAGTACCTCATaGCCCACCAGTTCAGGGACT +
Preference number: 4 (lower is better)
Translates to: IKLNRNEEPERLLGPFHDLLSTS*PTSSGT
Trigger: AGTCCCTGAACTGGTGGGGCATGAGGTACTCAGTAA...ATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATTTCTATTCAGTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCTGGTTTCTAAGAGCCTaGTCTTACAGTGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCWFLRA*SYSGPK
Trigger: TTTGGGACCACTGTAAGAGCAGGCTCTTAGAAACCA...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGATCGTGATCGAGCATaGCCTGGCTTGAAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLDRDRA*PGLKVE
Trigger: CTCAACTTTCAAGCCAGGGCATGCTCGATCACGATC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGATGTTTGGGAATGTCTaGTTGTGTTCAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQMFGNV*LCSVFP
Trigger: AGGAAATACTGAACACAAGCAGACATTCCCAAACAT...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAAGGTTTTGATTCCCACTaGTGTCGAGGCTGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQGFDSH*CRGCRS
Trigger: ACTTCTACAGCCTCGACAGCAGTGGGAATCAAAACC...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGCAGCACAAATGTAAATaGCTTCCAGTTGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLQHKCK*LPVVLD
Trigger: GTCCAAAACAACTGGAAGGCATTTACATTTGTGCTG...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATCAGCACAAATGTAAATaGCTTCCAGTTGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNQHKCK*LPVVLD
Trigger: GTCCAAAACAACTGGAAGGCATTTACATTTGTGCTG...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGTTGTGGACTATGCGTaGTGGAATGAGAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEVVDYA*WNEKAV
Trigger: GACAGCTTTCTCATTCCAGCACGCATAGTCCACAAC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCCCTCTATTACCTGCTaGAGGTCGGCAAGTGAATAC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLPSITC*RSASEY
Trigger: GTATTCACTTGCCGACCTGCAGCAGGTAATAGAGGG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTTTCCCTCTATTACCTaGTGCAGGTCGGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEFPSIT*CRSASE
Trigger: TTCACTTGCCGACCTGCAGCAGGTAATAGAGGGAAA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCACAGCTCGAACATGGTaGAAGCCTCCTCTAGACTCT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSTARTW*KPPLDS
Trigger: AGAGTCTAGAGGAGGCTTGCACCATGTTCGAGCTGT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGACATAGAAGGCATCTaGTCAGCGCGAAAGCTACAG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSDIEGI*SARKLQ
Trigger: CTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATGTC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCTTCAGGTCTCCAAATaGAGTGTGCTAGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLLQVSK*SVLGMA
Trigger: GGCCATTCCTAGCACACTGCATTTGGAGACCTGAAG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAAACTGGCTTCTTTACTaGGGGGTTAGATGCCAACAT +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEENWLLY*GVRCQH
Trigger: ATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCAACATGACTAATGCATaGTGCTGGTCATTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCNMTNA*CWSFLR
Trigger: CCGCAGAAATGACCAGCAGCATGCATTAGTCATGTT...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp GCACCAGGTTGGAGCTATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCTGCTCCATAATATCTaGAGCCTCATCTCTAGCCTA +
Preference number: 4 (lower is better)
Translates to: APGWSYITFYDLALEITWLLHNI*SLISSL
Trigger: TAGGCTAGAGATGAGGCTGCAGATATTATGGAGCAG...CCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAGCTGGTTCCAGAAATaGCTTCATGAACATTCACCC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYSWFQK*LHEHSP
Trigger: GGGTGAATGTTCATGAAGCCATTTCTGGAACCAGCT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCAGCTGGTTCCAGAAATaGCTTCATGAACATTCACCC +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCSWFQK*LHEHSP
Trigger: GGGTGAATGTTCATGAAGCCATTTCTGGAACCAGCT...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTTAGCCTCCTAAGCTaGTTCCAGAAATGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLSLLS*FQKWLH
Trigger: ATGAAGCCATTTCTGGAACCAGCTTAGGAGGCTAAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCCAGGAAAGATTATCTaGGGTTGTCCCTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSPGKII*GCPSLD
Trigger: GTCCAGAGAGGGACAACCCCAGATAATCTTTCCTGG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCCAGGAAAGATTATCTaGGGTTGTCCCTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLPGKII*GCPSLD
Trigger: GTCCAGAGAGGGACAACCCCAGATAATCTTTCCTGG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCAGTATCCACCATCCTaGCCTCCAGGTTGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLQYPPS*PPGCLK
Trigger: TTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTGTTTTGGTACTGTTTaGAGCTGTCCAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSCFGTV*SCPGQG
Trigger: CCCCTGTCCTGGACAGCTCCAAACAGTACCAAAACA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAAGATTTGAGGATGTTTTaGTACTGTTTGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKDLRMF*YCLELS
Trigger: GGACAGCTCCAAACAGTACCAAAACATCCTCAAATC...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTGGTAGTCACAGATTaGCGTTTGTTCTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLVVTD*RLFFLS
Trigger: ACTCAGGAAGAACAAACGCCAATCTGTGACTACCAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGAAGGAGGTATTCTCTaGGGAAAATTCTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSEGGIL*GKFCGG
Trigger: TCCGCCGCAGAATTTTCCCCAGAGAATACCTCCTTC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGTTCTGTGGATCGTCTaGACAATGATGTACACAGAG +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFVLWIV*TMMYTE
Trigger: CTCTGTGTACATCATTGTCCAGACGATCCACAGAAC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAACAACACGCAGTTATTaGTCGCAGAGGTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEETTRSY*SQRFLL
Trigger: GAGAAGAAACCTCTGCGACCAATAACTGCGTGTTGT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGGCCTCGCTGACAGTTaGAATCACGGATACATTAAT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYGLADS*NHGYIN
Trigger: ATTAATGTATCCGTGATTCCAACTGTCAGCGAGGCC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCACATGGACCCAGCTCTaGGTAGCTGATGGTGATAAC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSTWTQL*VADGDN
Trigger: GTTATCACCATCAGCTACCCAGAGCTGGGTCCATGT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTACATGGACCCAGCTCTaGGTAGCTGATGGTGATAAC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLTWTQL*VADGDN
Trigger: GTTATCACCATCAGCTACCCAGAGCTGGGTCCATGT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCACATTTCACCAGGGTTaGACGATCTCACACATGAGT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFTFHQG*TISHMS
Trigger: ACTCATGTGTGAGATCGTCCAACCCTGGTGAAATGT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGCCTTTTCTAGCCAATaGGTAGAGAACAAACTCCCA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYAFSSQ*VENKLP
Trigger: TGGGAGTTTGTTCTCTACCCATTGGCTAGAAAAGGC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGAAACCAGGCAGTATTaGAATCAGGAGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEETRQY*NQEVKI
Trigger: GATCTTCACCTCCTGATTCCAATACTGCCTGGTTTC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTATTGCACAGGCTCCTaGGCTCAAGCAATCTACCCA +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSYCTGS*AQAIYP
Trigger: TGGGTAGATTGCTTGAGCCCAGGAGCCTGTGCAATA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATGAAGGAGGTATTCTCTaGGGAAAATTCTCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNEGGIL*GKFSKN
Trigger: GTTTTTGGAGAATTTTCCCCAGAGAATACCTCCTTC...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGTTTATGACTTGGCTTTaGAAATCACATGGCATCACT +
Preference number: 4 (lower is better)
Translates to: GTPRKVISALTKHHPTPQFMTWL*KSHGIT
Trigger: AGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAA...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCCAAGAGCATCTATATaGAGAGTAGCCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLPRASI*RVASRE
Trigger: TTCCCTGCTGGCTACTCTTCATATAGATGCTCTTGG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTATTTTTCAAAGAGATaGGGGTCTCGCTATCTTGCC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFYFSKR*GSRYLA
Trigger: GGCAAGATAGCGAGACCCTCATCTCTTTGAAAAATA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGAGATTATTCTTCAGTaGGACCTCTGTGAAGACAAC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFEIILQ*DLCEDN
Trigger: GTTGTCTTCACAGAGGTCTCACTGAAGAATAATCTC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGGACCAAATGTTCCTTTaGGATTATTCTTCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLDQMFL*DYSSVR
Trigger: TCTCACTGAAGAATAATCTCAAAGGAACATTTGGTC...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTGTCTGTTATGTTACTaGGTACCTCATGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLCLLCY*VPHAPP
Trigger: TGGTGGGGCATGAGGTACTCAGTAACATAACAGACA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTATGCTCTGGAAGTGTaGAAGCTGGTACGTGGCATA +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSYALEV*KLVRGI
Trigger: TATGCCACGTACCAGCTTTCACACTTCCAGAGCATA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCGACACCTTATACTTTaGAGTATCCCAGTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAERHLIL*SIPVVD
Trigger: GTCCACAACTGGGATACTTCAAAGTATAAGGTGTCG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTCGACACCTTATACTTTaGAGTATCCCAGTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPRHLIL*SIPVVD
Trigger: GTCCACAACTGGGATACTTCAAAGTATAAGGTGTCG...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAATACAGATTTCACAGATaGACCCCTTCTGGCTACAAA +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEYRFHR*TPSGYK
Trigger: TTTGTAGCCAGAAGGGGTTCATCTGTGAAATCTGTA...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATTCACACCTGCTTGTTaGAATATCCTCAAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRFTPAC*NILKRV
Trigger: TACCCTTTTGAGGATATTTCAACAAGCAGGTGTGAA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGGATCGTCTGGACAATaGTGTACACAGAGCATACGT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSGSSGQ*CTQSIR
Trigger: ACGTATGCTCTGTGTACATCATTGTCCAGACGATCC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCACCATGGGCACCCGTTaGAAACTGTTAAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSTMGTR*KLLRKP
Trigger: TGGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGCCTCCACAGGATTCTaGGAAAAGAAACTAAAACGA +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEASTGF*EKKLKR
Trigger: TCGTTTTAGTTTCTTTTCTCAGAATCCTGTGGAGGC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGAAAACTACTAAACCATaGAGACATAGAAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLKTTKP*RHRRHL
Trigger: CAGATGCCTTCTATGTCTTCATGGTTTAGTAGTTTT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAACACAGATCTCACTACTaGATAGGAGGAGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQHRSHY*IGGASK
Trigger: CTTTGATGCTCCTCCTATTCAGTAGTGAGATCTGTG...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGGTTTTGATTCCCACTaGTGTCGAGGCTGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSGFDSH*CRGCRS
Trigger: ACTTCTACAGCCTCGACAGCAGTGGGAATCAAAACC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGTTGTGGACTATGCGTaGTGGAATGAGAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLVVDYA*WNEKAV
Trigger: GACAGCTTTCTCATTCCAGCACGCATAGTCCACAAC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAGAAACTCCTTGGCCTaGTTCGACACCTTATACTTT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYRNSLA*FDTLYF
Trigger: AAAGTATAAGGTGTCGAAGCAGGCCAAGGAGTTTCT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTTTCCCTCTATTACCTaGTGCAGGTCGGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSFPSIT*CRSASE
Trigger: TTCACTTGCCGACCTGCAGCAGGTAATAGAGGGAAA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAACTGGCTTCTTTACTaGGGGGTTAGATGCCAACAT +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAENWLLY*GVRCQH
Trigger: ATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATCAGCAATAGAGCTATaGAAACAACTGGAAGAAACC +
Preference number: 4 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKSAIEL*KQLEET
Trigger: GGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGA...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGGGGTTGTCCCTCTCTaGACCATAAACTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSGVVPL*TINCSL
Trigger: CAAAGAACAGTTTATGGTCCAGAGAGGGACAACCCC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGTGGCAGCAGCCCACTaGTTTTCTTCTGGAAACTAT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSVAAAH*FSSGNY
Trigger: ATAGTTTCCAGAAGAAAACCAGTGGGCTGCTGCCAC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTCTGGTAGTCACAGATTaGCGTTTGTTCTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPLVVTD*RLFFLS
Trigger: ACTCAGGAAGAACAAACGCCAATCTGTGACTACCAG...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTACTCCAGAAACTCCTTaGCCTGCTTCGACACCTTAT +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLTPETP*PASTPY
Trigger: ATAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGTTCTGTGGATCGTCTaGACAATGATGTACACAGAG +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEVLWIV*TMMYTE
Trigger: CTCTGTGTACATCATTGTCCAGACGATCCACAGAAC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAACATCTCTAGATGGATaGAAGTATCATGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEETSLDG*KYHELG
Trigger: CCCCAACTCATGATACTTCCATCCATCTAGAGATGT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGTCTATTTTAGGAACTaGCTTCTTTACTGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFVYFRN*LLYCGV
Trigger: AACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGAC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGTATTCCCTTCTTGGTaGAGGCCTACTCTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEVFPSW*RPTLEE
Trigger: TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATAC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTATTCGGCAACTAGGGTaGTGTAAACACCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLIRQLG*CKHLGS
Trigger: AGATCCGAGGTGTTTACACCACCCTAGTTGCCGAAT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAAGACGAACAGGCAGTaGCTTCTCTTTTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLKTNRQ*LLFSQG
Trigger: TCCCTGTGAAAAGAGAAGCCACTGCCTGTTCGTCTT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTGAATCTTCTACTCTaGGCAACAACCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLNLLL*ATTSFI
Trigger: AATGAAGCTGGTTGTTGCCCAGAGTAGAAGATTCAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCTGAGGGGCTCGAGTTaGCTCCTGGAATCCTTATCT +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSLRGSS*LLESLS
Trigger: AGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAG...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp AAACCACAGATCCCAAGTATTAGACGTATTCCCTTCTaGGTGGAGGCCTACTCTAGAAGAATCAAAAACCGA +
Preference number: 4 (lower is better)
Translates to: KPQIPSIRRIPF*VEAYSRRIKNR
Trigger: TCGGTTTTTGATTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCTGTGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp TGTCGAAACACCGTTCCACATGACAGAAATCAACACTaGTCTGTTTACATTAACCGAGCAGAGCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: CRNTVPHDRNQH*SVYINRAELSH
Trigger: GTGACTAAGCTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGTGTTTCGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp ACAGCACCAGGTTGGAGCTATATCACCTTTTATGACTaGGCTTTGGAAATCACATGGCATCACTTCCATAGT +
Preference number: 4 (lower is better)
Translates to: TAPGWSYITFYD*ALEITWHHFHS
Trigger: ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAGCTCCAACCTGGTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAATTCTGCATTGTTTATTaGGAGAGAGAGAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEFCIVY*EREREN
Trigger: GTTCTCTCTCTCTCTCTCTCAATAAACAATGCAGAA...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAAAGAGAGTCCCTGATTTaGGGATGTTTTGGTACTGTT +
Preference number: 4 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQRESLI*GCFGTV
Trigger: AACAGTACCAAAACATCCTCAAATCAGGGACTCTCT...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTTACAGGTGGATCTGTTaGAGGAGGTATTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSYRWIC*RRYSLG
Trigger: CCCCAGAGAATACCTCCTTCAACAGATCCACCTGTA...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGCCTCCACAGGATTCTaGGAAAAGAAACTAAAACGA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEASTGF*EKKLKR
Trigger: TCGTTTTAGTTTCTTTTCTCAGAATCCTGTGGAGGC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGTACCAAGTATGTTGTaGGCCACTGATCCTAATAGC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSVPSML*ATDPNS
Trigger: GCTATTAGGATCAGTGGCTCACAACATACTTGGTAC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGCACAAAAGTCAGTCTaGAATGTCACATCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFAQKSV*NVTSLD
Trigger: ATCTAGAGATGTGACATTTCAGACTGACTTTTGTGC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGAGGAGGAAAGGAGATaGTCAAATTTGTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEEEERR*SNLFAC
Trigger: ACAGGCAAACAAATTTGATCATCTCCTTTCCTCCTC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAAAAATAAGCAGAAAATaGTGTGGGTGGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEKISRK*CGWKVL
Trigger: GAGGACTTTCCACCCACATCATTTTCTGCTTATTTT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACAGTGCCACAAAACATaGTCATTTGGAACTTACTTT +
Preference number: 4 (lower is better)
Translates to: LSHLSLAMLSITPAATLRQCHKT*SFGTYF
Trigger: AAAGTAAGTTCCAAATGATCATGTTTTGTGGCACTG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCCCAACCAAGAGGGGTaGTTCAGCAATAGAGCTATG +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSPNQEG*FSNRAM
Trigger: CATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGG...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTGATCCCATAAACCTCTaGCTGCTGCACAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSDPINL*LLHSLF
Trigger: GAAAAGGCTGTGCAGCAGGCAGAGGTTTATGGGATC...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCAGCACAAATGTAAATaGCTTCCAGTTGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYQHKCK*LPVVLD
Trigger: GTCCAAAACAACTGGAAGGCATTTACATTTGTGCTG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTTCCTCAGTGTGACTTaGAGGTTTTGCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLFLSVT*RFCSEL
Trigger: GAGTTCAGAGCAAAACCTGCAAGTCACACTGAGGAA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCACAGCTTTCACACCTaGTTGTTGAAATATCCTCAA +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYHSFHT*LLKYPQ
Trigger: TTGAGGATATTTCAACAAGCAGGTGTGAAAGCTGTG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGGACAGACTTTTCTTTaGATTCAGAATGGAAAACGG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEGQTFL*IQNGKR
Trigger: CCGTTTTCCATTCTGAATGCAAAGAAAAGTCTGTCC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGCTCTTTCAAGGTCTTaGTCCAACTTCACGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEALSRS*SNFTFS
Trigger: TGAAAACGTGAAGTTGGAGCAAGACCTTGAAAGAGC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTGAGATGGTTTGTTTCTaGTCCATAATATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPEMVCF*SIISAA
Trigger: GGCTGCAGATATTATGGAGCAGAAACAAACCATCTC...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTCAATTATGGATGGCTaGTTTTTATTTCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLSIMDG*FLFLYP
Trigger: TGGGTAGAGAAATAAAAACCAGCCATCCATAATTGA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCACCCTCCAGTCCACTTaGGTAATATCTGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSTLQST*VISDRD
Trigger: ATCACGATCAGATATTACCCAAGTGGACTGGAGGGT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ATCAAACTGAATAGAAATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATACCCTCCAGTCCACTTaGGTAATATCTGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: IKLNRNEEPERLLGPFHDTLQST*VISDRD
Trigger: ATCACGATCAGATATTACCCAAGTGGACTGGAGGGT...ATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATTTCTATTCAGTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTGTAGTTGCACACCTTaGCTTTCCCATTGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSCSCTP*LSHWKD
Trigger: GTCTTTCCAATGGGAAAGCCAAGGTGTGCAACTACA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTGTAGTTGCACACCTTaGCTTTCCCATTGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLCSCTP*LSHWKD
Trigger: GTCTTTCCAATGGGAAAGCCAAGGTGTGCAACTACA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAGTTTAACAATGACTTaGATTTTCCCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYSLTMT*IFPQPC
Trigger: GCATGGCTGAGGGAAAATCCAAGTCATTGTTAAACT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGATCATGACATTCCCCTaGGTTTGGTTAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEIMTFP*VWLMKA
Trigger: TGCTTTCATTAACCAAACTCAGGGGAATGTCATGAT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTATTTTTCAAAGAGATaGGGGTCTCGCTATCTTGCC +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLYFSKR*GSRYLA
Trigger: GGCAAGATAGCGAGACCCTCATCTCTTTGAAAAATA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAATTCTATCTTATTTGGTaGGGGCAACAGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQFYLIW*GQQKRW
Trigger: CCATCTTTTCTGTTGCCCTCACCAAATAAGATAGAA...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGCCTTTAGCTGTAGCTaGGTGTTGTCATACAAAACA +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLAFSCS*VLSYKT
Trigger: TGTTTTGTATGACAACACTCAGCTACAGCTAAAGGC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAAAAACTACTAAACCATaGAGACATAGAAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEKTTKP*RHRRHL
Trigger: CAGATGCCTTCTATGTCTTCATGGTTTAGTAGTTTT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACATGCATGTATGGTGTTaGGCTATTAAGGTGAAATGT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYMHVWC*AIKVKC
Trigger: ACATTTCACCTTAATAGCTCAACACCATACATGCAT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCTGTTGCCAAGTGTTTaGGATTTTCCACCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSLLPSV*DFPPFF
Trigger: GAAAAAGGGTGGAAAATCTCAAACACTTGGCAACAG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTCAGATCAACGGAGATaGATAATTGTGCACAAATAC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFSDQRR*IIVHKY
Trigger: GTATTTGTGCACAATTATTCATCTCCGTTGATCTGA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCCTATATCACCTTTTATaGCTTGGCTTTGGAAATCAC +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCLYHLL*LGFGNH
Trigger: GTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAG...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCAGAAACTCCTTGGCCTaGTTCGACACCTTATACTTT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSRNSLA*FDTLYF
Trigger: AAAGTATAAGGTGTCGAAGCAGGCCAAGGAGTTTCT...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCACAGCTTTCACACCTaGTTGTTGAAATATCCTCAA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEHSFHT*LLKYPQ
Trigger: TTGAGGATATTTCAACAAGCAGGTGTGAAAGCTGTG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGGTAATCCACAGATTTaGTTTTGTTTCGACAGTTTC +
Preference number: 4 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFGNPQI*FCFDSF
Trigger: GAAACTGTCGAAACAAAAGCAAATCTGTGGATTACC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTGGGGTTGTCCCTCTCTaGACCATAAACTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSGVVPL*TINCSL
Trigger: CAAAGAACAGTTTATGGTCCAGAGAGGGACAACCCC...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAAAACAGATATGCTCTaGAAGTGTGAAAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEKTDML*KCESWY
Trigger: GTACCAGCTTTCACACTTCCAGAGCATATCTGTTTT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGATTTGAGGATGTTTTaGTACTGTTTGGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSDLRMF*YCLELS
Trigger: GGACAGCTCCAAACAGTACCAAAACATCCTCAAATC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTCTTTGCATTCAGAATaGAAAACGGCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLSLHSE*KTAPQL
Trigger: AAGCTGTGGAGCCGTTTTCCATTCTGAATGCAAAGA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTCTTTGCATTCAGAATaGAAAACGGCTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSSLHSE*KTAPQL
Trigger: AAGCTGTGGAGCCGTTTTCCATTCTGAATGCAAAGA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTATACCACGTTTTGTCTaGGAGCAAGCAGCTGAAATT +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLIPRFV*EQAAEI
Trigger: AATTTCAGCTGCTTGCTCCCAGACAAAACGTGGTAT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCAAGTTTTCAAGCCTTaGTTGCGGCTACTGTATAGT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSQVFKP*LRLLYS
Trigger: ACTATACAGTAGCCGCAACCAAGGCTTGAAAACTTG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAAGCAGGTATTAGTTTaGTCTGAAAGAGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: HRRHLLSAKATESSHKVYKQVLV*SERGGN
Trigger: ATTACCACCTCTTTCAGACCAAACTAATACCTGCTT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCACAACCATTTTATTATaGGCTCACACATTTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCTTILL*AHTFCR
Trigger: CCGACAAAATGTGTGAGCCCATAATAAAATGGTTGT...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTTCTATCTTATTTGGTaGGGGCAACAGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSFYLIW*GQQKRW
Trigger: CCATCTTTTCTGTTGCCCTCACCAAATAAGATAGAA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTTCACACCTGCTTGTTaGAATATCCTCAAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLFTPAC*NILKRV
Trigger: TACCCTTTTGAGGATATTTCAACAAGCAGGTGTGAA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCAGTGCCACAAAACATaGTCATTTGGAACTTACTTT +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEQCHKT*SFGTYF
Trigger: AAAGTAAGTTCCAAATGATCATGTTTTGTGGCACTG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTTTCCTCAGTGTGACTTaGAGGTTTTGCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSFLSVT*RFCSEL
Trigger: GAGTTCAGAGCAAAACCTGCAAGTCACACTGAGGAA...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGGTAATCCACAGATTTaGTTTTGTTTCGACAGTTTC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEGNPQI*FCFDSF
Trigger: GAAACTGTCGAAACAAAAGCAAATCTGTGGATTACC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCTTAGCCTCCTAAGCTaGTTCCAGAAATGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSLSLLS*FQKWLH
Trigger: ATGAAGCCATTTCTGGAACCAGCTTAGGAGGCTAAG...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCATAAATATCAACCATaGGCACCCGTTGAAAACTGT +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSHKYQP*APVENC
Trigger: ACAGTTTTCAACGGGTGCCCATGGTTGATATTTATG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTAATCTGCCACACACTTaGTCAGATGTATTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSNLPHT*SDVFPK
Trigger: CTTGGGGAATACATCTGACCAAGTGTGTGGCAGATT...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CCA 90 bp ATCAAACTGAATAGAAATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATTGTAAGAAAGACATGTaGGATGGAAGATACTGTTGC +
Preference number: 4 (lower is better)
Translates to: IKLNRNEEPERLLGPFHDCKKDM*DGRYCC
Trigger: GCAACAGTATCTTCCATCCCACATGTCTTTCTTACA...ATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATTTCTATTCAGTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
3UTR CAA 72 bp GCAGTGGAACAATTACCTAACAGTGCACCAAGTAATTaGTTAAAGTTGAAAACAGTAAGGGCGTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: AVEQLPNSAPSN*LKLKTVRAFMC
Trigger: GCACATGAACGCCCTTACTGTTTTCAACTTTAACAAATTACTTGGTGCACTGTTAGGTAATTGTTCCACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp CTGGTAAAAGTGCTAATGGCACTAAGAAGCCAATGTTaGTACCATTCTACTTTAACGACGTGTTTCCGACAT +
Preference number: 4 (lower is better)
Translates to: LVKVLMALRSQC*YHSTLTTCFRH
Trigger: ATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACATTGGCTTCTTAGTGCCATTAGCACTTTTACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTTACCTCAGCCTCTGTaGAGGCTAAAAATAAATAAC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSLPQPL*RLKINN
Trigger: GTTATTTATTTTTAGCCTTCACAGAGGCTGAGGTAA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTCAGATCAACGGAGATaGATAATTGTGCACAAATAC +
Preference number: 4 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSSDQRR*IIVHKY
Trigger: GTATTTGTGCACAATTATTCATCTCCGTTGATCTGA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR GCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAATTTGTTTGCCTGTTaGCAAGTGTTTGAGATTTTC +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAENLFAC*QVFEIF
Trigger: GAAAATCTCAAACACTTGGCAACAGGCAAACAAATT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTCAATTATGGATGGCTaGTTTTTATTTCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAESIMDG*FLFLYP
Trigger: TGGGTAGAGAAATAAAAACCAGCCATCCATAATTGA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CCA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTTCCCACTTCTTATTTaGAAAACAGGTGGCAAAATA +
Preference number: 4 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEFPLLI*KTGGKI
Trigger: TATTTTGCCACCTGTTTTCCAAATAAGAAGTGGGAA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp GCCATGCACCCATTAAAACGCACTAAGGAAAGACCCTaGAGTCAGAGATTTTTGAATCCAATGAAATTAGAA +
Preference number: 4 (lower is better)
Translates to: AMHPLKRTKERP*SQRFLNPMKLE
Trigger: TTCTAATTTCATTGGATTCAAAAATCTCTGACTCAAGGGTCTTTCCTTAGTGCGTTTTAATGGGTGCATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
3UTR CAA 72 bp CCTAATTTGATGGCTCAGTGGACACACAAAGCTAATTaGATAGCTCACGCCAAACAAAGAGACATTTTTATC +
Preference number: 4 (lower is better)
Translates to: PNLMAQWTHKAN*IAHAKQRDIFI
Trigger: GATAAAAATGTCTCTTTGTTTGGCGTGAGCTATCAAATTAGCTTTGTGTGTCCACTGAGCCATCAAATTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR TCA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCTATATCACCTTTTATaGCTTGGCTTTGGAAATCAC +
Preference number: 4 (lower is better)
Translates to: YITFYDLALEITWHHFHSLYHLL*LGFGNH
Trigger: GTGATTTCCAAAGCCAAGTCATAAAAGGTGATATAG...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 90 bp CTCTCCATTCACCTGCGGGGCCTTCAGTCCGCTCCTGGAGGGGCTTaGCTCCCGCAGCCTGCCGCCCGCCTCACGGTGACAGCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: LSIHLRGLQSAPGGA*LPQPAARLTVTARP
Trigger: CGGGCGGGCTGTCACCGTGAGGCGGGCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGCGGACTGAAGGCCCCGCAGGTGAATGGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS GCA 90 bp CGACTTCAGCCGCTGCCGCAGCCGCAGCACGGCGGCCAGCGGCTCTaGGTGGTGGTACAGCATGGCGTTCTCCTGCTGGATGTCGATGAG +
Preference number: 5 (lower is better)
Translates to: RLQPLPQPQHGGQRL*VVVQHGVLLLDVDE
Trigger: CTCATCGACATCCAGCAGGAGAACGCCATGCTGTACCACCACGCAGAGCCGCTGGCCGCCGTGCTGCGGCTGCGGCAGCGGCTGAAGTCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 90 bp GGTCATTTCTGCGGCGGAGATCCTCTGCCACCGCTGCCCGGCAGCTaGACAAATAGGCTCGGAGCGACTTCAGCCGCTGCCGCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GHFCGGDPLPPLPGS*TNRLGATSAAAAAA
Trigger: TGCGGCTGCGGCAGCGGCTGAAGTCGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAAATGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 90 bp GGAAAATTCTGCGGCGGAGATCCTCTGCCACCGCTGCCCGGCAGCTaGACAAATAGGCTCGGAGCGACTTCAGCCGCTGCCGCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GKFCGGDPLPPLPGS*TNRLGATSAAAAAA
Trigger: TGCGGCTGCGGCAGCGGCTGAAGTCGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAATTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS-3UTR CAA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCGCTCCTGGAGGGGCTaGACTCCCGCAGCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLRSWRG*TPAACR
Trigger: GCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGCG...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCCGCTCCTGGAGGGGCTaGACTCCCGCAGCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGRSWRG*TPAACR
Trigger: GCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGCG...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 90 bp TGCATGCTGCTGGTCATTTCTGCGGCGGAGATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATAGGCTCGGAGCGACTTCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: CMLLVISAAEILCHR*PAAEQIGSERLQPL
Trigger: CAGCGGCTGAAGTCGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAAATGACCAGCAGCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 90 bp ACGGCGGCCAGCGGCTCTGCGTGGTGGTACAGCATGGCGTTCTCCTaGTGGATGTCGATGAGCGGCTCTTCGTACACGTACTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: TAASGSAWWYSMAFS*WMSMSGSSYTYSRN
Trigger: GTTTCTGGAGTACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGGAGAACGCCATGCTGTACCACCACGCAGAGCCGCTGGCCGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 90 bp GCGGCCAGCGGCTCTGCGTGGTGGTACAGCATGGCGTTCTCCTGCTaGATGTCGATGAGCGGCTCTTCGTACACGTACTCCAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: AASGSAWWYSMAFSC*MSMSGSSYTYSRNS
Trigger: GGAGTTTCTGGAGTACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGGAGAACGCCATGCTGTACCACCACGCAGAGCCGCTGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCGCTCCTGGAGGGGCTaGACTCCCGCAGCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRRSWRG*TPAACR
Trigger: GCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGCG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATGCCACGCCAATCCTaGATTTCCTGGGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIMPRQS*ISWAPA
Trigger: AGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCAT...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 90 bp CTCCTCGCCACATTGGCAGCTATCTTCAGAGCCTCCATCCATTCCTaGGCCCTCTGTCGGGTCTCAGCTCGGAGGCGAAGGACATCCTGG +
Preference number: 5 (lower is better)
Translates to: LLATLAAIFRASIHS*ALCRVSARRRRTSW
Trigger: CCAGGATGTCCTTCGCCTCCGAGCTGAGACCCGACAGAGGGCTCAGGAATGGATGGAGGCTCTGAAGATAGCTGCCAATGTGGCGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 90 bp GTATTCTCTGGGGAAAATTCTGCGGCGGAGATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATAGGCTCGGAGCGACTTCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: VFSGENSAAEILCHR*PAAEQIGSERLQPL
Trigger: CAGCGGCTGAAGTCGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAATTTTCCCCAGAGAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS-3UTR CAA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCTCGCAGCCATCCAGGTaGTCCATCTGGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSISQPSR*SIWTAR
Trigger: TCTGGCTGTCCAGATGGACAACCTGGATGGCTGCGA...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGAACTCCTCGCCACATaGGCAGCTATCTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTELLAT*AAIFRA
Trigger: GGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTTC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCGAACTCCTCGCCACATaGGCAGCTATCTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIELLAT*AAIFRA
Trigger: GGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTTC...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGTCCTACCTGCCGTTTaGGTCACAGTGACTGCCACG +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAVLPAV*VTVTAT
Trigger: CGTGGCAGTCACTGTGACCAAAACGGCAGGTAGGAC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS TCA 90 bp GCTCTGCGTGGTGGTACAGCATGGCGTTCTCCTGCTGGATGTCGATaGGCGGCTCTTCGTACACGTACTCCAGAAACTCCTTGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ALRGGTAWRSPAGCR*AALRTRTPETPWPA
Trigger: AGCAGGCCAAGGAGTTTCTGGAGTACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGGAGAACGCCATGCTGTACCACCACGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 90 bp GCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCATCTGTaGATCAGGTTAGATTTGGCTGTAGTGCCTGGGTCTGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: AATSRAELPRSFNHL*IRLDLAVVPGSAAG
Trigger: ACCTGCAGCAGACCCAGGCACTACAGCCAAATCTAACCTGATCCACAGATGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTTGCCCAGACTTGTCTaGAACTCCTGGGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALPRLV*NSWAPV
Trigger: CACTGGAGCCCAGGAGTTCAAGACAAGTCTGGGCAA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATATGCCACGCCAATCCTaGATTTCCTGGGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDMPRQS*ISWAPA
Trigger: AGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCAT...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTGACATGCGGGCCTaGAAGCAATGGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDGDMRA*KQWLLL
Trigger: CAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACC...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTGGAAGTATCATGAGTaGGGGTCTTGGGGAAGCGGC +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAWKYHE*GSWGSG
Trigger: GCCGCTTCCCCAAGACCCCAACTCATGATACTTCCA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS GCA 90 bp GGGTCGGCTGGAGTCAGGTGTTCTGGTAGGACAGCTCGAACATGGTaGAAGCCTCCTCTAGACTCTCGTCCATGTTCAGTCTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: GSAGVRCSGRTARTW*KPPLDSRPCSVSAR
Trigger: TCTGGCAGAGACTGAACATGGACGAGAGTCTAGAGGAGGCTTGCACCATGTTCGAGCTGTCCTACCAGAACACCTGACTCCAGCCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS CCA 90 bp GGGCAACAGAAAAGATGGCCTGGTGACATGCGGGCCTTGAAGCAATaGCTGCTGCTGTTGCTGCTGCTGCAAAGGCGTGGTTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: GQQKRWPGDMRALKQ*LLLLLLLQRRGFED
Trigger: GTCCTCAAAACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CCA 90 bp TTCGGGTCGGCTGGAGTCAGGTGTTCTGGTAGGACAGCTCGAACATaGTGCAAGCCTCCTCTAGACTCTCGTCCATGTTCAGTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: FGSAGVRCSGRTART*CKPPLDSRPCSVSA
Trigger: GGCAGAGACTGAACATGGACGAGAGTCTAGAGGAGGCTTGCACCATGTTCGAGCTGTCCTACCAGAACACCTGACTCCAGCCGACCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCGCTCCTGGAGGGGCTaGACTCCCGCAGCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYRSWRG*TPAACR
Trigger: GCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGCG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAGACAACAGCAAGTACTaGTCAAAGCAATGCCACGCC +
Preference number: 5 (lower is better)
Translates to: VPHICCHIPCRAPPILQSDNSKY*SKQCHA
Trigger: GGCGTGGCATTGCTTTGACAAGTACTTGCTGTTGTC...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTCGAGCATGCCCTGGCTaGAAAGTTGAGGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPRACPG*KVEVSS
Trigger: GGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCG...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATCGCAGCCATCCAGGTaGTCCATCTGGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGSQPSR*SIWTAR
Trigger: TCTGGCTGTCCAGATGGACAACCTGGATGGCTGCGA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCTGGGGGAAAATGACTaGAAAGCAAGAGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALGEND*KARVAA
Trigger: GGCTGCGACTCTTGCTTTCAAGTCATTTTCCCCCAG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTTCATGCCCACCCATTaGATCCTTGGGTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: VLSAAHLLPHPVPSSPDPFMPTH*ILGFVP
Trigger: AGGAACAAACCCAAGGATCAAATGGGTGGGCATGAA...AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCGCTGGTAGTCACAGATaGGCGTTTGTTCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIAGSHR*AFVLPE
Trigger: CTCAGGAAGAACAAACGCCAATCTGTGACTACCAGC...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAACCTTGGCTTTCCCATaGGAAAGACCTATGGATCGC +
Preference number: 5 (lower is better)
Translates to: VPHICCHIPCRAPPILQSTLAFP*ERPMDR
Trigger: GCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGGT...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTCCAGAATTTCGCCCTaGACTCTCGGCAGGTATGAC +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREASRISP*TLGRYD
Trigger: GTCATACCTGCCGAGAGTCAAGGGCGAAATTCTGGA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGGCTTTTTAAGTACTTaGTGGCCTTCCTGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAGFLST*WPSCRG
Trigger: ACCGCGGCAGGAAGGCCACAAAGTACTTAAAAAGCC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS TCA 90 bp TTTGGTGAGGGCAACAGAAAAGATGGCCTGGTGACATGCGGGCCTTaGAGCAATGGCTGCTGCTGTTGCTGCTGCTGCAAAGGCGTGGTT +
Preference number: 5 (lower is better)
Translates to: FGEGNRKDGLVTCGP*SNGCCCCCCCKGVV
Trigger: AACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCCTCACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS TCA 90 bp TCTGTCGGGTCTCAGCTCGGAGGCGAAGGACATCCTGGGGGAAAATaGCTTGAAAGCAAGAGTCGCAGCCATCCAGGTTGTCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: SVGSQLGGEGHPGGK*LESKSRSHPGCPSG
Trigger: TCCAGATGGACAACCTGGATGGCTGCGACTCTTGCTTTCAAGTCATTTTCCCCCAGGATGTCCTTCGCCTCCGAGCTGAGACCCGACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 90 bp TCCTCTAGACTCTCGTCCATGTTCAGTCTCTGCCAGAAAGACTTCTaGTTCTTCTGCAGCTCTCGGCGAACACACCTCGGGCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: SSRLSSMFSLCQKDF*FFCSSRRTHLGQGT
Trigger: TGTCCCCTGCCCGAGGTGTGTTCGCCGAGAGCTGCAGAAGAAGCAGAAGTCTTTCTGGCAGAGACTGAACATGGACGAGAGTCTAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACGAGCATGCCCTGGCTaGAAAGTTGAGGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGRACPG*KVEVSS
Trigger: GGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCGGTGACATGCGGGCCTaGAAGCAATGGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSGDMRA*KQWLLL
Trigger: CAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACC...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTATCCTGGCCTCCAGGTaGCCTAAAACAGATATGCTC +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAILASR*PKTDML
Trigger: GAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGAT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCAATACAGGTGGATCTGTaGAAGGAGGTATTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VPHICCHIPCRAPPILQSIQVDL*KEVFSG
Trigger: CCCAGAGAATACCTCCTTCAACAGATCCACCTGTAT...TGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTGTGTATACCACGTTTaGTCTGGGAGCAAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREACVYHV*SGSKQL
Trigger: CAGCTGCTTGCTCCCAGACAAAACGTGGTATACACA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTAACCATGGGCACCCGTaGAAAACTGTTAAGAAAGCC +
Preference number: 5 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTNHGHP*KTVKKA
Trigger: GGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGTT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTAACATTTCACCAGGGTaGGACGATCTCACACATGAG +
Preference number: 5 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTNISPG*DDLTHE
Trigger: CTCATGTGTGAGATCGTCCAACCCTGGTGAAATGTT...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTCAATCCAATCTGCCACACACTaGGTCAGATGTATTCCCCAA +
Preference number: 5 (lower is better)
Translates to: SAAHLLPHPVPSSPDPSIQSATH*VRCIPQ
Trigger: TTGGGGAATACATCTGACCAAGTGTGTGGCAGATTG...GATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 90 bp CTCTCGTCCATGTTCAGTCTCTGCCAGAAAGACTTCTGCTTCTTCTaGAGCTCTCGGCGAACACACCTCGGGCAGGGGACAGACTTTTCT +
Preference number: 5 (lower is better)
Translates to: LSSMFSLCQKDFCFF*SSRRTHLGQGTDFS
Trigger: AGAAAAGTCTGTCCCCTGCCCGAGGTGTGTTCGCCGAGAGCTGCAGAAGAAGCAGAAGTCTTTCTGGCAGAGACTGAACATGGACGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS GCA 90 bp GCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTaGCGAGCTCCCCCGATCCTTCAATCATCTGTGGATCAGGTTAGA +
Preference number: 5 (lower is better)
Translates to: AVTLSLVPHICCHIP*RAPPILQSSVDQVR
Trigger: TCTAACCTGATCCACAGATGATTGAAGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS CCA 90 bp CGTGGCAGCTACTGCAGTAATACCACCCACTGTAGTTGCACACCTTaGCTTTCCCATTGGAAAGACCTATGGATCGCTGGCAGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RGSYCSNTTHCSCTP*LSHWKDLWIAGSLH
Trigger: GTGCAGGCTGCCAGCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGGTGTGCAACTACAGTGGGTGGTATTACTGCAGTAGCTGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS-3UTR CAA 90 bp CTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTCGTGGCATAAAGGTTTaGATTCCCACTGCTGTCGAG +
Preference number: 5 (lower is better)
Translates to: LQPQPVLLSLPEGLELAPRGIKV*IPTAVE
Trigger: CTCGACAGCAGTGGGAATCAAAACCTTTATGCCACG...AGGAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTCAAGCCCTGGTGAGATaGTCAGCTCATTCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGQALVR*SAHSAA
Trigger: GGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTG...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTTCATGCCCACCCATTaGATCCTTGGGTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAFMPTH*ILGFVP
Trigger: AGGAACAAACCCAAGGATCAAATGGGTGGGCATGAA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTGTCACAGATTGGCGTTaGTTCTTCCTGAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAVTDWR*FFLSSC
Trigger: GCATGAACTCAGGAAGAACAAACGCCAATCTGTGAC...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGTCCTACCTGCCGTTTaGGTCACAGTGACTGCCACG +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRVLPAV*VTVTAT
Trigger: CGTGGCAGTCACTGTGACCAAAACGGCAGGTAGGAC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTCTGAGGGATACCACTaGTGTTGCAAACCACAGATC +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREASEGYH*CCKPQI
Trigger: GATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTCTTAGTGCCGCACATTaGCTGCCACATCCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVLSAAH*LPHPVP
Trigger: CGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAG...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACAGCCTCAACCGGTATaGTTGTCTCTACCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GLSSLISLVADDRCQLEQQPQPV*LSLPEG
Trigger: CCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTG...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTTGCAAAGGCGTGGTTTaGAGGACTACCCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGCKGVV*RTTLQS
Trigger: GGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGCA...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGGTGACATGCGGGCCTaGAAGCAATGGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDGDMRA*KQWLLL
Trigger: CAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACGTGGCATAAAGGTTTaGATTCCCACTGCTGTCGAG +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGRGIKV*IPTAVE
Trigger: CTCGACAGCAGTGGGAATCAAAACCTTTATGCCACG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCGCAGCCATCCAGGTaGTCCATCTGGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVSQPSR*SIWTAR
Trigger: TCTGGCTGTCCAGATGGACAACCTGGATGGCTGCGA...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAACCTTGGCTTTCCCATaGGAAAGACCTATGGATCGC +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGTLAFP*ERPMDR
Trigger: GCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGGT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATACTCCAGAAACTCCTaGGCCTGCTTCGACACCTTA +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGYSRNS*ACFDTL
Trigger: TAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGTA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAGTGTAATCCAGCTATaGGTAGTTTCTCGAGCCACA +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREASVIQL*VVSRAT
Trigger: TGTGGCTCGAGAAACTACCAATAGCTGGATTACACT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGAGGGAGAAGGCACTTaGCCATGGGAGCACATCTGT +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHREGEGT*PWEHIC
Trigger: ACAGATGTGCTCCCATGGCAAAGTGCCTTCTCCCTC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGATGGGTCTCACCATATaGCACAGGCTCCTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRMGLTI*HRLLGS
Trigger: TGAGCCCAGGAGCCTGTGCAATATGGTGAGACCCAT...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATCTTAGTGCCGCACATTaGCTGCCACATCCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNLSAAH*LPHPVP
Trigger: CGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAG...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCAATCTGCCACACACTaGGTCAGATGTATTCCCCAA +
Preference number: 5 (lower is better)
Translates to: SCSLNRYCCLYLRGSSWLQSATH*VRCIPQ
Trigger: TTGGGGAATACATCTGACCAAGTGTGTGGCAGATTG...GAGCCAACTCGAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 90 bp AACATGGTGCAAGCCTCCTCTAGACTCTCGTCCATGTTCAGTCTCTaGCAGAAAGACTTCTGCTTCTTCTGCAGCTCTCGGCGAACACAC +
Preference number: 5 (lower is better)
Translates to: NMVQASSRLSSMFSL*QKDFCFFCSSRRTH
Trigger: GTGTGTTCGCCGAGAGCTGCAGAAGAAGCAGAAGTCTTTCTGGCAGAGACTGAACATGGACGAGAGTCTAGAGGAGGCTTGCACCATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS CCA 90 bp AAAGCTTCCATGTCACAGGCTCCAGGAGGCCTTAGCCTCCTAAGCTaGTTCCAGAAATGGCTTCATGAACATTCACCCAACCAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: KASMSQAPGGLSLLS*FQKWLHEHSPNQEG
Trigger: CCCCTCTTGGTTGGGTGAATGTTCATGAAGCCATTTCTGGAACCAGCTTAGGAGGCTAAGGCCTCCTGGAGCCTGTGACATGGAAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS-3UTR CAA 90 bp GTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAGCTCCCCCGATCCTTTTCTCATAGCACCATaGTCTGTTATGTTACTGAGT +
Preference number: 5 (lower is better)
Translates to: VLSAAHLLPHPVPSSPDPFLIAP*SVMLLS
Trigger: ACTCAGTAACATAACAGACAATGGTGCTATGAGAAA...AGGATCGGGGGAGCTCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTCGAGCATGCCCTGGCTaGAAAGTTGAGGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVRACPG*KVEVSS
Trigger: GGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCG...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATTGCAAAGGCGTGGTTTaGAGGACTACCCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHCKGVV*RTTLQS
Trigger: GGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGCA...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCAAGCCCTGGTGAGATaGTCAGCTCATTCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDQALVR*SAHSAA
Trigger: GGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGTAAATGCCTTCCAGTaGTTTTGGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGVNAFQ*FWTVSL
Trigger: CAGGCTGACTGTCCAAAACAACTGGAAGGCATTTAC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTGAACTCCTCGCCACATaGGCAGCTATCTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPELLAT*AAIFRA
Trigger: GGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTTC...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAAACCTTGGCTTTCCCATaGGAAAGACCTATGGATCGC +
Preference number: 5 (lower is better)
Translates to: GLSSLISLVADDRCQLEQTLAFP*ERPMDR
Trigger: GCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGGT...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGACAACACGCAGTTATaGGTCGCAGAGGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGDNTQL*VAEVSS
Trigger: AGAAGAAACCTCTGCGACCAATAACTGCGTGTTGTC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGATGATCAAATTTGTTaGCCTGTTGCCAAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTDDQIC*PVAKCL
Trigger: CAAACACTTGGCAACAGGCAAACAAATTTGATCATC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTCCAGAATTTCGCCCTaGACTCTCGGCAGGTATGAC +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRSRISP*TLGRYD
Trigger: GTCATACCTGCCGAGAGTCAAGGGCGAAATTCTGGA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATCTGAGGGATACCACTaGTGTTGCAAACCACAGATC +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGSEGYH*CCKPQI
Trigger: GATCTGTGGTTTGCAACACAAGTGGTATCCCTCAGA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS TCA 90 bp GAAACTATGATTCTGTGTATAGTCATCATGATGGCCAAGCCCTGGTaGGATTGTCAGCTCATTCTGCCGCCCCATGTAACCGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: ETMILCIVIMMAKPW*DCQLILPPHVTGHS
Trigger: GCTGTGCCCGGTTACATGGGGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTGGCCATCATGATGACTATACACAGAATCATAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 90 bp TGCTGCTGCAAAGGCGTGGTTTTGAGGACTACCCTCCAGTCCACTTaGGTAATATCTGATCGTGATCGAGCATGCCCTGGCTTGAAAGTT +
Preference number: 5 (lower is better)
Translates to: CCCKGVVLRTTLQST*VISDRDRACPGLKV
Trigger: AACTTTCAAGCCAGGGCATGCTCGATCACGATCAGATATTACCCAAGTGGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTACACACAAAGCTAATTaGATAGCTCACGCCAAACAA +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREATHKAN*IAHAKQ
Trigger: TTGTTTGGCGTGAGCTATCAAATTAGCTTTGTGTGT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCAGCCAAAGCCTAATTaGATGGCTCAGTGGACACAC +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRQPKPN*MAQWTH
Trigger: GTGTGTCCACTGAGCCATCAAATTAGGCTTTGGCTG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTTGCCCAGACTTGTCTaGAACTCCTGGGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLLPRLV*NSWAPV
Trigger: CACTGGAGCCCAGGAGTTCAAGACAAGTCTGGGCAA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCATGCCACGCCAATCCTaGATTTCCTGGGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFMPRQS*ISWAPA
Trigger: AGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCAT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTTTCTCATAGCACCATaGTCTGTTATGTTACTGAGT +
Preference number: 5 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTFLIAP*SVMLLS
Trigger: ACTCAGTAACATAACAGACAATGGTGCTATGAGAAA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGATCCTGGCCTCCAGGTaGCCTAAAACAGATATGCTC +
Preference number: 5 (lower is better)
Translates to: LSLPEGLELAPGILISTEILASR*PKTDML
Trigger: GAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGAT...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGACAAGCCCTGGTGAGATaGTCAGCTCATTCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: LSHLSLAMLSITPAATLRQALVR*SAHSAA
Trigger: GGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTG...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGATGTTTTGGTACTGTTaGGAGCTGTCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: LSLPEGLELAPGILISTEMFWYC*ELSRTG
Trigger: CCCTGTCCTGGACAGCTCCAAACAGTACCAAAACAT...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAATTCATGCCCACCCATTaGATCCTTGGGTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: GLSSLISLVADDRCQLEQFMPTH*ILGFVP
Trigger: AGGAACAAACCCAAGGATCAAATGGGTGGGCATGAA...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGCTGGTAGTCACAGATaGGCGTTTGTTCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRAGSHR*AFVLPE
Trigger: CTCAGGAAGAACAAACGCCAATCTGTGACTACCAGC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGCTGTCTTCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAATTTGAAGTATCCCAGTaGTGGACTATGCGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GLSSLISLVADDRCQLEQFEVSQ*WTMRAG
Trigger: TCCAGCACGCATAGTCCACAACTGGGATACTTCAAA...TTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGAAGACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CAACAGCACTCAGATGACTGCATGCCAAGGGACTCCCAGGAAAGTGATTTCAGCTACTCCAGAAACTCCTaGGCCTGCTTCGACACCTTA +
Preference number: 5 (lower is better)
Translates to: QQHSDDCMPRDSQESDFSYSRNS*ACFDTL
Trigger: TAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGTA...GCTGAAATCACTTTCCTGGGAGTCCCTTGGCATGCAGTCATCTGAGTGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGGACCCAGCAGTCTCTaGTGTTTTGAAGGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGGPSSL*CFEGFL
Trigger: AAGAAAACCTTCAAAACACAAGAGACTGCTGGGTCC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATCTGTCAGAGGGGGCTaGGCTCCTGTTTCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: LSHLSLAMLSITPAATLRSVRGG*APVSSH
Trigger: ATGGCTGGAAACAGGAGCCAAGCCCCCTCTGACAGA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAGGAACTGGTGTGGGTaGAGAGGTAAAATGCTTACA +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGRNWCG*RGKMLT
Trigger: TGTAAGCATTTTACCTCTCAACCCACACCAGTTCCT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTTCCACCCTTTTTCTTTaGTGTGCAACATTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTSTLFL*CATFSL
Trigger: TAAAGAGAATGTTGCACACAAAAGAAAAAGGGTGGA...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGAGCTGTCAGGGTCCCAGGGCTGTCCTACCTGCCGTTTTGGTCACAGTGACTGAAAACAAAGATGTTTaGAACGGGGATCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: GSCQGPRAVLPAVLVTVTENKDV*NGDPEF
Trigger: AAATTCTGGATCCCCGTTCAAAACATCTTTGTTTTC...AGTCACTGTGACCAAAACGGCAGGTAGGACAGCCCTGGGACCCTGACAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGGGGGTTTCACCATGTaGGCCAGGCTGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFGGFTM*ARLASN
Trigger: GTTTGAGGCCAGCCTGGCCAACATGGTGAAACCCCC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTAAAGCAAAACAGCAGTaGTCTCACTTGAGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAKAKQQ*SHLSLA
Trigger: TGCTAAACTCAAGTGAGACAACTGCTGTTTTGCTTT...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAACCTGAGGGGCTCGAGTaGGCTCCTGGAATCCTTATC +
Preference number: 5 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKPEGLE*APGILI
Trigger: GATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGG...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 90 bp TTGATCCTTGGGTTTGTTCCTCAGTGTGACTTGCAGGTTTTGCTCTaGACTCCTCGCCACATTGGCAGCTATCTTCAGAGCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: LILGFVPQCDLQVLL*TPRHIGSYLQSLHP
Trigger: TGGATGGAGGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTTCAGAGCAAAACCTGCAAGTCACACTGAGGAACAAACCCAAGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 90 bp TCTATTACCTGCTGCAGGTCGGCAAGTGAATACAGGTGGATCTGTTaGAGGAGGTATTCTCTGGGGAAAATTCTGCGGCGGAGATCCTCT +
Preference number: 5 (lower is better)
Translates to: SITCCRSASEYRWIC*RRYSLGKILRRRSS
Trigger: AGAGGATCTCCGCCGCAGAATTTTCCCCAGAGAATACCTCCTTCAACAGATCCACCTGTATTCACTTGCCGACCTGCAGCAGGTAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS CCA 90 bp ATGAACATTCACCCAACCAAGAGGGGTGCTTCAGCAATAGAGCTATaGAAACAACTGGAAGAAACCTTCATTGGGCTCCCTGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: MNIHPTKRGASAIEL*KQLEETFIGLPGAG
Trigger: GCCTGCTCCAGGGAGCCCAATGAAGGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGGTGAATGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CCA 90 bp TCCTTGGCCTGCTTCGACACCTTATACTTTGAAGTATCCCAGTTGTaGACTATGCGTGCTGGAATGAGAAAGCTGTCATCCACGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SLACFDTLYFEVSQL*TMRAGMRKLSSTWQ
Trigger: CTGCCACGTGGATGACAGCTTTCTCATTCCAGCACGCATAGTCCACAACTGGGATACTTCAAAGTATAAGGTGTCGAAGCAGGCCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTTTTCTGCATTGTTTATaGAGAGAGAGAGAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREAFLHCL*RERERE
Trigger: TTCTCTCTCTCTCTCTCTCAATAAACAATGCAGAAA...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTGACAACAGCAAGTACTaGTCAAAGCAATGCCACGCC +
Preference number: 5 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVDNSKY*SKQCHA
Trigger: GGCGTGGCATTGCTTTGACAAGTACTTGCTGTTGTC...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCCGTGGCATAAAGGTTTaGATTCCCACTGCTGTCGAG +
Preference number: 5 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFRGIKV*IPTAVE
Trigger: CTCGACAGCAGTGGGAATCAAAACCTTTATGCCACG...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATTGCCTTCCAGTTGTTTaGGACAGTCAGCCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHCLPVV*DSQPVE
Trigger: CTCTACAGGCTGACTGTCCAAAACAACTGGAAGGCA...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCTGCCTTCCAGTTGTTTaGGACAGTCAGCCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFCLPVV*DSQPVE
Trigger: CTCTACAGGCTGACTGTCCAAAACAACTGGAAGGCA...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TCACTCATCTCTCTGGTGGCTGATGATCGCTGCCAGCTAGAACAACTACCATATCTGGGGGAAAATGACTaGAAAGCAAGAGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: SLISLVADDRCQLEQLPYLGEND*KARVAA
Trigger: GGCTGCGACTCTTGCTTTCAAGTCATTTTCCCCCAG...ATATGGTAGTTGTTCTAGCTGGCAGCGATCATCAGCCACCAGAGAGATGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATGCTGGTAGTCACAGATaGGCGTTTGTTCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHAGSHR*AFVLPE
Trigger: CTCAGGAAGAACAAACGCCAATCTGTGACTACCAGC...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TTGTCTCTACCTGAGGGGCTCGAGTTGGCTCCTGGAATCCTTATCTCAACTGAGTTTGAAGTATCCCAGTaGTGGACTATGCGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LSLPEGLELAPGILISTEFEVSQ*WTMRAG
Trigger: TCCAGCACGCATAGTCCACAACTGGGATACTTCAAA...CTCAGTTGAGATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGGTAGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGCAAATTTAATGACCTaGCCCAAGAATGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRANLMT*PKNGAS
Trigger: GCTGGCTCCATTCTTGGGCAAGGTCATTAAATTTGC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CAGGGGAAACAGAGAGTGCCGCTACCGATTCAGGTCACGCAAAGGAGGGAGGCTCTAAAACGACCCTCTTaGGGAATATACTTACTAGAT +
Preference number: 5 (lower is better)
Translates to: QGKQRVPLPIQVTQRREALKRPS*GIYLLD
Trigger: ATCTAGTAAGTATATTCCCAAAGAGGGTCGTTTTAG...AGCCTCCCTCCTTTGCGTGACCTGAATCGGTAGCGGCACTCTCTGTTTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGGTTTTCAAGCCTTGGTaGCGGCTACTGTATAGTCAG +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRVFKPW*RLLYSQ
Trigger: CTGACTATACAGTAGCCGCAACCAAGGCTTGAAAAC...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAACCTCAACCGGTATTGTaGTCTCTACCTGAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKPQPVL*SLPEGL
Trigger: GAGCCCCTCAGGTAGAGACAACAATACCGGTTGAGG...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 90 bp ACAGATGAACCCCTTCTGGCTACAAAGACTGCAGCTGTACACGTGTaGGGTGGCAAATTTAATGACCTTGCCCAAGAATGGAGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TDEPLLATKTAAVHV*GGKFNDLAQEWSQL
Trigger: AAGCTGGCTCCATTCTTGGGCAAGGTCATTAAATTTGCCACCTCACACGTGTACAGCTGCAGTCTTTGTAGCCAGAAGGGGTTCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGACTTCCCACTTCTTATTaGGAAAACAGGTGGCAAAAT +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGLPTSY*ENRWQN
Trigger: ATTTTGCCACCTGTTTTCCAAATAAGAAGTGGGAAG...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTATGCCACGCCAATCCTaGATTTCCTGGGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLMPRQS*ISWAPA
Trigger: AGCCGGGGCCCAGGAAATCAAGGATTGGCGTGGCAT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAACGAGCATGCCCTGGCTaGAAAGTTGAGGTCTCATCC +
Preference number: 5 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEERACPG*KVEVSS
Trigger: GGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCG...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAATGCAAAGGCGTGGTTTaGAGGACTACCCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEECKGVV*RTTLQS
Trigger: GGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGCA...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATAGGTTTCTGCATAACAGCTTaGCCAGTAACTGTCATGGTC +
Preference number: 5 (lower is better)
Translates to: KNQKDSWGPFMMAVGGIGFCITA*PVTVMV
Trigger: GACCATGACAGTTACTGGCAAAGCTGTTATGCAGAA...ACCTATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTGCCTTCCAGTTGTTTaGGACAGTCAGCCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDCLPVV*DSQPVE
Trigger: CTCTACAGGCTGACTGTCCAAAACAACTGGAAGGCA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTGTAAATGCCTTCCAGTaGTTTTGGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TFCRSVRTPGRTLWRWFVVNAFQ*FWTVSL
Trigger: CAGGCTGACTGTCCAAAACAACTGGAAGGCATTTAC...AACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TTCCCCAAGTACCCTAGGTTCAACTCCGCTGACTTCAACAATGCCTATCTGCCTGTAAATGCCTTCCAGTaGTTTTGGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: FPKYPRFNSADFNNAYLPVNAFQ*FWTVSL
Trigger: CAGGCTGACTGTCCAAAACAACTGGAAGGCATTTAC...AGGCAGATAGGCATTGTTGAAGTCAGCGGAGTTGAACCTAGGGTACTTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCGGGGAGGTCACAGATTGGCGTTaGTTCTTCCTGAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: WKSHGITSIVTDLPKFGEVTDWR*FFLSSC
Trigger: GCATGAACTCAGGAAGAACAAACGCCAATCTGTGAC...CTCCCCGAATTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGACCTTGGCTTTCCCATaGGAAAGACCTATGGATCGC +
Preference number: 5 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLTLAFP*ERPMDR
Trigger: GCGATCCATAGGTCTTTCCAATGGGAAAGCCAAGGT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGAGGGAGAAGGCACTTaGCCATGGGAGCACATCTGT +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYEGEGT*PWEHIC
Trigger: ACAGATGTGCTCCCATGGCAAAGTGCCTTCTCCCTC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGGGGGTTTCACCATGTaGGCCAGGCTGGCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLGGFTM*ARLASN
Trigger: GTTTGAGGCCAGCCTGGCCAACATGGTGAAACCCCC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAAAAGCAAAACAGCAGTaGTCTCACTTGAGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGKAKQQ*SHLSLA
Trigger: TGCTAAACTCAAGTGAGACAACTGCTGTTTTGCTTT...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGACTCCCAGGAAAGTGATTTCAGCACTGACTAAACACCATCCAACTCCACAGCAAAAGGCAGTGACTTaGTCCTTAGTGCCGCACATT +
Preference number: 5 (lower is better)
Translates to: GTPRKVISALTKHHPTPQQKAVT*SLVPHI
Trigger: AATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTG...CTGTGGAGTTGGATGGTGTTTAGTCAGTGCTGAAATCACTTTCCTGGGAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAACCTGAGGGGCTCGAGTaGGCTCCTGGAATCCTTATC +
Preference number: 5 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQPEGLE*APGILI
Trigger: GATAAGGATTCCAGGAGCCAACTCGAGCCCCTCAGG...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 90 bp AAATGCCTTCCAGTTGTTTTGGACAGTCAGCCTGTAGAGAGTCCCTaGTTTGAGGATGTTTTGGTACTGTTTGGAGCTGTCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: KCLPVVLDSQPVESP*FEDVLVLFGAVQDR
Trigger: CCTGTCCTGGACAGCTCCAAACAGTACCAAAACATCCTCAAATCAGGGACTCTCTACAGGCTGACTGTCCAAAACAACTGGAAGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 90 bp GTCACAGATTGGCGTTTGTTCTTCCTGAGTTCATGCCCACCCATTTaGTCCTTGGGTTTGTTCCTCAGTGTGACTTGCAGGTTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: VTDWRLFFLSSCPPI*SLGLFLSVTCRFCS
Trigger: AGAGCAAAACCTGCAAGTCACACTGAGGAACAAACCCAAGGATCAAATGGGTGGGCATGAACTCAGGAAGAACAAACGCCAATCTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 90 bp CCTTATACTTTGAAGTATCCCAGTTGTGGACTATGCGTGCTGGAATaGGAAAGCTGTCATCCACGTGGCAGCTACTGCAGTAATACCACC +
Preference number: 5 (lower is better)
Translates to: PYTLKYPSCGLCVLE*ESCHPRGSYCSNTT
Trigger: GGTGGTATTACTGCAGTAGCTGCCACGTGGATGACAGCTTTCTCATTCCAGCACGCATAGTCCACAACTGGGATACTTCAAAGTATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 90 bp GAGTGTTGTCATACAAAACAGTATCCACCATCCTGGCCTCCAGGTTaGCTAAAACAGATATGCTCTGGAAGTGTGAAAGCTGGTACGTGG +
Preference number: 5 (lower is better)
Translates to: ECCHTKQYPPSWPPG*LKQICSGSVKAGTW
Trigger: CCACGTACCAGCTTTCACACTTCCAGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTGTTTTGTATGACAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 90 bp TGCTTCAGCAATAGAGCTATGGAAACAACTGGAAGAAACCTTCATTaGGCTCCCTGGAGCAGGCCAAACCCAAAGTGGTTGATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CFSNRAMETTGRNLH*APWSRPNPKWLMFS
Trigger: GGAAAACATCAACCACTTTGGGTTTGGCCTGCTCCAGGGAGCCCAATGAAGGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATTTCTGCATTGTTTATaGAGAGAGAGAGAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGFLHCL*RERERE
Trigger: TTCTCTCTCTCTCTCTCTCAATAAACAATGCAGAAA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAGACAACAGCAAGTACTaGTCAAAGCAATGCCACGCC +
Preference number: 5 (lower is better)
Translates to: LSHLSLAMLSITPAATLRDNSKY*SKQCHA
Trigger: GGCGTGGCATTGCTTTGACAAGTACTTGCTGTTGTC...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGCTCACACATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATAGACCAAATGTTCCTTaGAGATTATTCTTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GLTHFVGRSGLQEGHCGDRPNVP*RLFFSE
Trigger: CTCACTGAAGAATAATCTCAAAGGAACATTTGGTCT...ATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAATGTGTGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AAGGCAGTGACTTTGTCCTTAGTGCCGCACATTTGCTGCCACATCCCGTGCCGAAGACCAAATGTTCCTTaGAGATTATTCTTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: KAVTLSLVPHICCHIPCRRPNVP*RLFFSE
Trigger: CTCACTGAAGAATAATCTCAAAGGAACATTTGGTCT...TCGGCACGGGATGTGGCAGCAAATGTGCGGCACTAAGGACAAAGTCACTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ATCCAACTCCACAGCTGCAGCCTCAACCGGTATTGTTGTCTCTACCTGAGGGGCTTTCTCATAGCACCATaGTCTGTTATGTTACTGAGT +
Preference number: 5 (lower is better)
Translates to: IQLHSCSLNRYCCLYLRGFLIAP*SVMLLS
Trigger: ACTCAGTAACATAACAGACAATGGTGCTATGAGAAA...GCCCCTCAGGTAGAGACAACAATACCGGTTGAGGCTGCAGCTGTGGAGTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAATGTTTTGGTACTGTTaGGAGCTGTCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: LSHLSLAMLSITPAATLRMFWYC*ELSRTG
Trigger: CCCTGTCCTGGACAGCTCCAAACAGTACCAAAACAT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTCGCAGCCATCCAGGTaGTCCATCTGGACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSSQPSR*SIWTAR
Trigger: TCTGGCTGTCCAGATGGACAACCTGGATGGCTGCGA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCTGGGGGAAAATGACTaGAAAGCAAGAGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYLGEND*KARVAA
Trigger: GGCTGCGACTCTTGCTTTCAAGTCATTTTCCCCCAG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTTTGAAGTATCCCAGTaGTGGACTATGCGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLFEVSQ*WTMRAG
Trigger: TCCAGCACGCATAGTCCACAACTGGGATACTTCAAA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGATCCAAAGTTGGTATTTaGAAGTTCCACATTACTCTG +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGSKVGI*KFHITL
Trigger: CAGAGTAATGTGGAACTTCAAAATACCAACTTTGGA...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGTTTTCAAGCCTTGGTaGCGGCTACTGTATAGTCAG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDVFKPW*RLLYSQ
Trigger: CTGACTATACAGTAGCCGCAACCAAGGCTTGAAAAC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCCTGTTGCCAAGTGTTaGAGATTTTCCACCCTTTTT +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRPVAKC*RFSTLF
Trigger: AAAAAGGGTGGAAAATCTCAAACACTTGGCAACAGG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAACATTTCACCAGGGTaGGACGATCTCACACATGAG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDNISPG*DDLTHE
Trigger: CTCATGTGTGAGATCGTCCAACCCTGGTGAAATGTT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGGCTTTTTAAGTACTTaGTGGCCTTCCTGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYGFLST*WPSCRG
Trigger: ACCGCGGCAGGAAGGCCACAAAGTACTTAAAAAGCC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCACTGCAGCCGGAAGGAAGTCACGGCATAGTCCCTTTTCAGGAGTCTGAGGGAGACAGAAATCAACACTaGTCTGTTTACATTAACCGA +
Preference number: 5 (lower is better)
Translates to: SLQPEGSHGIVPFQESEGDRNQH*SVYINR
Trigger: TCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTC...TCCCTCAGACTCCTGAAAAGGGACTATGCCGTGACTTCCTTCCGGCTGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS TCA 90 bp GTCCCTCTCTGGACCATAAACTGTTCTTTGGCAGGGAAGACATTTTaGGCTTTGGTTTCTAAGAGCCTGCTCTTACAGTGGTCCCAAATC +
Preference number: 5 (lower is better)
Translates to: VPLWTINCSLAGKTF*ALVSKSLLLQWSQI
Trigger: GATTTGGGACCACTGTAAGAGCAGGCTCTTAGAAACCAAAGCTCAAAATGTCTTCCCTGCCAAAGAACAGTTTATGGTCCAGAGAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS GCA 90 bp ACTACCCTCCAGTCCACTTGGGTAATATCTGATCGTGATCGAGCATaGCCTGGCTTGAAAGTTGAGGTCTCATCCAGTAAGTCATTTACA +
Preference number: 5 (lower is better)
Translates to: TTLQSTWVISDRDRA*PGLKVEVSSSKSFT
Trigger: TGTAAATGACTTACTGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCGATCACGATCAGATATTACCCAAGTGGACTGGAGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CCA 90 bp GGTTGCCTAAAACAGATATGCTCTGGAAGTGTGAAAGCTGGTACGTaGCATAAAGGTTTTGATTCCCACTGCTGTCGAGGCTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: GCLKQICSGSVKAGT*HKGFDSHCCRGCRS
Trigger: ACTTCTACAGCCTCGACAGCAGTGGGAATCAAAACCTTTATGCCACGTACCAGCTTTCACACTTCCAGAGCATATCTGTTTTAGGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCAGCCAAAGCCTAATTaGATGGCTCAGTGGACACAC +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFQPKPN*MAQWTH
Trigger: GTGTGTCCACTGAGCCATCAAATTAGGCTTTGGCTG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTGCAAAGGCGTGGTTTaGAGGACTACCCTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLCKGVV*RTTLQS
Trigger: GGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGCA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACTTCTGCATAACAGCTTaGCCAGTAACTGTCATGGTC +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDFCITA*PVTVMV
Trigger: GACCATGACAGTTACTGGCAAAGCTGTTATGCAGAA...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACATCCTGGCCTCCAGGTaGCCTAAAACAGATATGCTC +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYILASR*PKTDML
Trigger: GAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGAT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAATGTTTTGGTACTGTTaGGAGCTGTCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEMFWYC*ELSRTG
Trigger: CCCTGTCCTGGACAGCTCCAAACAGTACCAAAACAT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTCTGGGGGAAAATGACTaGAAAGCAAGAGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPLGEND*KARVAA
Trigger: GGCTGCGACTCTTGCTTTCAAGTCATTTTCCCCCAG...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGAACTCCTCGCCACATaGGCAGCTATCTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSELLAT*AAIFRA
Trigger: GGCTCTGAAGATAGCTGCCAATGTGGCGAGGAGTTC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTACTCCAGAAACTCCTaGGCCTGCTTCGACACCTTA +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYYSRNS*ACFDTL
Trigger: TAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGTA...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAAATACAGGTGGATCTGTaGAAGGAGGTATTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKIQVDL*KEVFSG
Trigger: CCCAGAGAATACCTCCTTCAACAGATCCACCTGTAT...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTCTGGGGCTGATGGATaGTTGATTGGTGAATCCCTG +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYSGADG*LIGESL
Trigger: CAGGGATTCACCAATCAACAATCCATCAGCCCCAGA...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAGGAACTGGTGTGGGTaGAGAGGTAAAATGCTTACA +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDRNWCG*RGKMLT
Trigger: TGTAAGCATTTTACCTCTCAACCCACACCAGTTCCT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAGACGTATTCCCTTCTaGGTGGAGGCCTACTCTAGA +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYRRIPF*VEAYSR
Trigger: TCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCAGCAGTTGTCTCACTaGAGTTTAGCAATGCTTTCC +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDQQLSH*SLAMLS
Trigger: GGAAAGCATTGCTAAACTCAAGTGAGACAACTGCTG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TCAACTGAGCTCCTTCTCACCTGGGCAACAGGGCTCTCTATCCACCACTCACAAGGATGGAAGATACTGTaGCAGCTATTTTTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: STELLLTWATGLSIHHSQGWKIL*QLFLQN
Trigger: ATTTTGCAAAAATAGCTGCAACAGTATCTTCCATCC...TTGTGAGTGGTGGATAGAGAGCCCTGTTGCCCAGGTGAGAAGGAGCTCAGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 90 bp AGGCCGGTCCCTCCGACGCTGACAGATATTGAAGAAATTAAAGGTTaGTGCTTCCTTTTGTTCCATCCAGGAAAGATTATCTGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: RPVPPTLTDIEEIKG*CFLLFHPGKIIWGC
Trigger: ACAACCCCAGATAATCTTTCCTGGATGGAACAAAAGGAAGCATCAACCTTTAATTTCTTCAATATCTGTCAGCGTCGGAGGGACCGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGTTCAATACTCTCCATTaGCAACCTAAGCATTTTCTC +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRFNTLH*QPKHFL
Trigger: GAGAAAATGCTTAGGTTGCAAATGGAGAGTATTGAA...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGACAACAGCAAGTACTaGTCAAAGCAATGCCACGCC +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEDNSKY*SKQCHA
Trigger: GGCGTGGCATTGCTTTGACAAGTACTTGCTGTTGTC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ATTTTGTCGGTCGGTCAGGACTCCAGGAAGGACACTGTGGAGATGGTTTGTTTCCATCTTCTATCTTATTaGGTGAGGGCAACAGAAAAG +
Preference number: 5 (lower is better)
Translates to: ILSVGQDSRKDTVEMVCFHLLSY*VRATEK
Trigger: CTTTTCTGTTGCCCTCACCAAATAAGATAGAAGATG...GAAACAAACCATCTCCACAGTGTCCTTCCTGGAGTCCTGACCGACCGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AATGAAGAACCAGAAAGACTCCTGGGGCCCTTTCATGATGGCTGTTGGTGGCATCCTTCTTTAGAATGTTaGGGAATGTCTGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: NEEPERLLGPFHDGCWWHPSLEC*GMSACV
Trigger: AACACAAGCAGACATTCCCAAACATTCTAAAGAAGG...ATGCCACCAACAGCCATCATGAAAGGGCCCCAGGAGTCTTTCTGGTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCACAGACCTGCCCAAATTCTGCATAACAGCTTaGCCAGTAACTGTCATGGTC +
Preference number: 5 (lower is better)
Translates to: TWLWKSHGITSIVTDLPKFCITA*PVTVMV
Trigger: GACCATGACAGTTACTGGCAAAGCTGTTATGCAGAA...TTTGGGCAGGTCTGTGACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCGTGGCATAAAGGTTTaGATTCCCACTGCTGTCGAG +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAERGIKV*IPTAVE
Trigger: CTCGACAGCAGTGGGAATCAAAACCTTTATGCCACG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCAAGCCCTGGTGAGATaGTCAGCTCATTCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: YITFYDLALEITWHHFHSQALVR*SAHSAA
Trigger: GGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTG...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TTTGCAAAATACAATCTGCCACACACTTGGTCAGATGTATTCCCCAAGTACCCTATGTTTTGGTACTGTTaGGAGCTGTCCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: FAKYNLPHTWSDVFPKYPMFWYC*ELSRTG
Trigger: CCCTGTCCTGGACAGCTCCAAACAGTACCAAAACAT...AGGGTACTTGGGGAATACATCTGACCAAGTGTGTGGCAGATTGTATTTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTGCCTTCCAGTTGTTTaGGACAGTCAGCCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAECLPVV*DSQPVE
Trigger: CTCTACAGGCTGACTGTCCAAAACAACTGGAAGGCA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGTAAATGCCTTCCAGTaGTTTTGGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFVNAFQ*FWTVSL
Trigger: CAGGCTGACTGTCCAAAACAACTGGAAGGCATTTAC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGTCACAGATTGGCGTTaGTTCTTCCTGAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEVTDWR*FFLSSC
Trigger: GCATGAACTCAGGAAGAACAAACGCCAATCTGTGAC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACTTTGAAGTATCCCAGTaGTGGACTATGCGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYFEVSQ*WTMRAG
Trigger: TCCAGCACGCATAGTCCACAACTGGGATACTTCAAA...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAATACAGGTGGATCTGTaGAAGGAGGTATTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEIQVDL*KEVFSG
Trigger: CCCAGAGAATACCTCCTTCAACAGATCCACCTGTAT...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCGCAAATTTAATGACCTaGCCCAAGAATGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFANLMT*PKNGAS
Trigger: GCTGGCTCCATTCTTGGGCAAGGTCATTAAATTTGC...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAACCATGGGCACCCGTaGAAAACTGTTAAGAAAGCC +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFNHGHP*KTVKKA
Trigger: GGCTTTCTTAACAGTTTTCAACGGGTGCCCATGGTT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GCACACCAGGCTGAACAAGGTGAGAGTTCTGACATGCATCATGGAATGCACAGGCTAAAACGACCCTCTTaGGGAATATACTTACTAGAT +
Preference number: 5 (lower is better)
Translates to: AHQAEQGESSDMHHGMHRLKRPS*GIYLLD
Trigger: ATCTAGTAAGTATATTCCCAAAGAGGGTCGTTTTAG...CCTGTGCATTCCATGATGCATGTCAGAACTCTCACCTTGTTCAGCCTGGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTGTCCTATCAGATTTaGGTGGTGGTGGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLSYQI*VVVAEN
Trigger: ATTCTCTGCCACCACCACCAAAATCTGATAGGACAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGAGCAACAGCATTGGCTaGACTCTAAAGGAGGACCAG +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAESNSIG*TLKEDQ
Trigger: CTGGTCCTCCTTTAGAGTCAAGCCAATGCTGTTGCT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGAGTTTAACAATGACTaGGATTTTCCCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDEFNND*DFPSAM
Trigger: CATGGCTGAGGGAAAATCCAAGTCATTGTTAAACTC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGAGCATCAAAGTCACAGTGTAAGAAAGACATGTGGGATGGAAGATACTGTTGCCAAAAGGCAGTGACTTaGTCCTTAGTGCCGCACATT +
Preference number: 5 (lower is better)
Translates to: GASKSQCKKDMWDGRYCCQKAVT*SLVPHI
Trigger: AATGTGCGGCACTAAGGACAAAGTCACTGCCTTTTG...GCAACAGTATCTTCCATCCCACATGTCTTTCTTACACTGTGACTTTGATGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 90 bp TGGTTCCAGAAATGGCTTCATGAACATTCACCCAACCAAGAGGGGTaGTTCAGCAATAGAGCTATGGAAACAACTGGAAGAAACCTTCAT +
Preference number: 5 (lower is better)
Translates to: WFQKWLHEHSPNQEG*FSNRAMETTGRNLH
Trigger: ATGAAGGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGGTGAATGTTCATGAAGCCATTTCTGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS GCA 90 bp GGAAGTGTGAAAGCTGGTACGTGGCATAAAGGTTTTGATTCCCACTaGTGTCGAGGCTGTAGAAGTATAAGTTGTAAGGTGAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: GSVKAGTWHKGFDSH*CRGCRSISCKVKVL
Trigger: CAGAACTTTCACCTTACAACTTATACTTCTACAGCCTCGACAGCAGTGGGAATCAAAACCTTTATGCCACGTACCAGCTTTCACACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CCA 90 bp TTAGCTGTAGCTGAGTGTTGTCATACAAAACAGTATCCACCATCCTaGCCTCCAGGTTGCCTAAAACAGATATGCTCTGGAAGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LAVAECCHTKQYPPS*PPGCLKQICSGSVK
Trigger: TTTCACACTTCCAGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTGTTTTGTATGACAACACTCAGCTACAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACGACATTCCCCTGAGTTaGGTTAATGAAAGCAAACAA +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDDIPLS*VNESKQ
Trigger: TTGTTTGCTTTCATTAACCAAACTCAGGGGAATGTC...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGACACACAAAGCTAATTaGATAGCTCACGCCAAACAA +
Preference number: 5 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLTHKAN*IAHAKQ
Trigger: TTGTTTGGCGTGAGCTATCAAATTAGCTTTGTGTGT...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCATCTTCTATCTTATTaGGTGAGGGCAACAGAAAAG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDHLLSY*VRATEK
Trigger: CTTTTCTGTTGCCCTCACCAAATAAGATAGAAGATG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGCTGGTAGTCACAGATaGGCGTTTGTTCTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSAGSHR*AFVLPE
Trigger: CTCAGGAAGAACAAACGCCAATCTGTGACTACCAGC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGATACAGGTGGATCTGTaGAAGGAGGTATTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEIQVDL*KEVFSG
Trigger: CCCAGAGAATACCTCCTTCAACAGATCCACCTGTAT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAGTGTAATCCAGCTATaGGTAGTTTCTCGAGCCACA +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYSVIQL*VVSRAT
Trigger: TGTGGCTCGAGAAACTACCAATAGCTGGATTACACT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCTGTGTATACCACGTTTaGTCTGGGAGCAAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSCVYHV*SGSKQL
Trigger: CAGCTGCTTGCTCCCAGACAAAACGTGGTATACACA...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGGGATACCACTTGTGTaGCAAACCACAGATCCCAAG +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSGIPLV*QTTDPK
Trigger: CTTGGGATCTGTGGTTTGCAACACAAGTGGTATCCC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAAAACAACCCCTGTGTaGAAACCAGGCAGTATTGGA +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFKTTPV*KPGSIG
Trigger: TCCAATACTGCCTGGTTTCAACACAGGGGTTGTTTT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACCTAAGAAGCCAATGTTaGTACCATTCTACTTTAACG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDLRSQC*YHSTLT
Trigger: CGTTAAAGTAGAATGGTACAAACATTGGCTTCTTAG...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GGGCCTGGAAAGAACACTACCCCCATTCCAGTTGACGGCTTTTTAAGTACTTTGTTCAATACTCTCCATTaGCAACCTAAGCATTTTCTC +
Preference number: 5 (lower is better)
Translates to: GPGKNTTPIPVDGFLSTLFNTLH*QPKHFL
Trigger: GAGAAAATGCTTAGGTTGCAAATGGAGAGTATTGAA...CAAAGTACTTAAAAAGCCGTCAACTGGAATGGGGGTAGTGTTCTTTCCAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGAGGTTCTGTGGATCGTCTGGACAATGATGTACACAGAGCATACGTACAGGACAGACCAAATGTTCCTTaGAGATTATTCTTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RGSVDRLDNDVHRAYVQDRPNVP*RLFFSE
Trigger: CTCACTGAAGAATAATCTCAAAGGAACATTTGGTCT...GTCCTGTACGTATGCTCTGTGTACATCATTGTCCAGACGATCCACAGAACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGTTCTGCATAACAGCTTaGCCAGTAACTGTCATGGTC +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEFCITA*PVTVMV
Trigger: GACCATGACAGTTACTGGCAAAGCTGTTATGCAGAA...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTTCATGCCCACCCATTaGATCCTTGGGTTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLFMPTH*ILGFVP
Trigger: AGGAACAAACCCAAGGATCAAATGGGTGGGCATGAA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCGACAACACGCAGTTATaGGTCGCAGAGGTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSDNTQL*VAEVSS
Trigger: AGAAGAAACCTCTGCGACCAATAACTGCGTGTTGTC...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCAAAGGAGCAATGGGGTaGAATGTACCAAGTATGTTG +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFKGAMG*NVPSML
Trigger: CAACATACTTGGTACATTCAACCCCATTGCTCCTTT...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACAAAGGAGCAATGGGGTaGAATGTACCAAGTATGTTG +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYKGAMG*NVPSML
Trigger: CAACATACTTGGTACATTCAACCCCATTGCTCCTTT...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCCTGTTGCCAAGTGTTaGAGATTTTCCACCCTTTTT +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYPVAKC*RFSTLF
Trigger: AAAAAGGGTGGAAAATCTCAAACACTTGGCAACAGG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTCTGTCCTATCAGATTTaGGTGGTGGTGGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLLSYQI*VVVAEN
Trigger: ATTCTCTGCCACCACCACCAAAATCTGATAGGACAG...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGCAGCAGTTGTCTCACTaGAGTTTAGCAATGCTTTCC +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEQQLSH*SLAMLS
Trigger: GGAAAGCATTGCTAAACTCAAGTGAGACAACTGCTG...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGTCACAGACCTGCCCAAATTCGGGGAGAAGGAACACAGATCTCACTACTGAATGGATGGAAGATACTGTaGCAGCTATTTTTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: SHRPAQIRGEGTQISLLNGWKIL*QLFLQN
Trigger: ATTTTGCAAAAATAGCTGCAACAGTATCTTCCATCC...ATTCAGTAGTGAGATCTGTGTTCCTTCTCCCCGAATTTGGGCAGGTCTGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACCCTTCTTTAGAATGTTaGGGAATGTCTGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYPSLEC*GMSACV
Trigger: AACACAAGCAGACATTCCCAAACATTCTAAAGAAGG...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTTACTCCAGAAACTCCTaGGCCTGCTTCGACACCTTA +
Preference number: 5 (lower is better)
Translates to: YITFYDLALEITWHHFHSYSRNS*ACFDTL
Trigger: TAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGTA...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAATTTCACACCTGCTTGTaGAAATATCCTCAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEFHTCL*KYPQKG
Trigger: ACCCTTTTGAGGATATTTCAACAAGCAGGTGTGAAA...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp CATAGAAGGCATCTGCTCAGCGCGAAAGCTACAGAATCTTCTCATAAAGTCTACGCAAGAATGGTCACATaGACAAAGGTCGAAATGAAA +
Preference number: 5 (lower is better)
Translates to: HRRHLLSAKATESSHKVYARMVT*TKVEMK
Trigger: TTTCATTTCGACCTTTGTCAATGTGACCATTCTTGC...GTAGACTTTATGAGAAGATTCTGTAGCTTTCGCGCTGAGCAGATGCCTTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGATCCACCCTTTTTCTTTaGTGTGCAACATTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: LSHLSLAMLSITPAATLRSTLFL*CATFSL
Trigger: TAAAGAGAATGTTGCACACAAAAGAAAAAGGGTGGA...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAAAACAACCCCTGTGTaGAAACCAGGCAGTATTGGA +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLKTTPV*KPGSIG
Trigger: TCCAATACTGCCTGGTTTCAACACAGGGGTTGTTTT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TTGTCTCACTTGAGTTTAGCAATGCTTTCCATCACACCAGCGGCCACTTTACGAACTAAGGAAAGACCCTaGAGTCAGAGATTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: LSHLSLAMLSITPAATLRTKERP*SQRFLN
Trigger: ATTCAAAAATCTCTGACTCAAGGGTCTTTCCTTAGT...TCGTAAAGTGGCCGCTGGTGTGATGGAAAGCATTGCTAAACTCAAGTGAGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGGAGTTTAACAATGACTaGGATTTTCCCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAEEFNND*DFPSAM
Trigger: CATGGCTGAGGGAAAATCCAAGTCATTGTTAAACTC...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTAAGAAGCCAATGTTaGTACCATTCTACTTTAACG +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLRSQC*YHSTLT
Trigger: CGTTAAAGTAGAATGGTACAAACATTGGCTTCTTAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCTTTCTCATAGCACCATaGTCTGTTATGTTACTGAGT +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFFLIAP*SVMLLS
Trigger: ACTCAGTAACATAACAGACAATGGTGCTATGAGAAA...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGGAAACAACAAAAACCCAACAACAACAACAGCACTCAGATGACTGCATGCCAACCTTCTTTAGAATGTTaGGGAATGTCTGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: RKQQKPNNNNSTQMTACQPSLEC*GMSACV
Trigger: AACACAAGCAGACATTCCCAAACATTCTAAAGAAGG...TTGGCATGCAGTCATCTGAGTGCTGTTGTTGTTGTTGGGTTTTTGTTGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTGTCACAGATTGGCGTTaGTTCTTCCTGAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: YITFYDLALEITWHHFHSVTDWR*FFLSSC
Trigger: GCATGAACTCAGGAAGAACAAACGCCAATCTGTGAC...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS-3UTR CAA 90 bp GAGGTCTATTTTAGGAACTGGCTTCTTTACTGCGGGGTTAGATGCCAACATTTCCTGAACTATAAAGCATaGTGTATACCACGTTTTGTC +
Preference number: 5 (lower is better)
Translates to: EVYFRNWLLYCGVRCQHFLNYKA*CIPRFV
Trigger: GACAAAACGTGGTATACACAATGCTTTATAGTTCAG...GAAATGTTGGCATCTAACCCCGCAGTAAAGAAGCCAGTTCCTAAAATAGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCCCAAGTATTAGACGTATTCCCTTCTTGGTGGAGGCCTACTCTAGAAGAAGACAGAAATCAACACTaGTCTGTTTACATTAACCGA +
Preference number: 5 (lower is better)
Translates to: RSQVLDVFPSWWRPTLEEDRNQH*SVYINR
Trigger: TCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTC...TTCTTCTAGAGTAGGCCTCCACCAAGAAGGGAATACGTCTAATACTTGGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGACATTCCCCTGAGTTaGGTTAATGAAAGCAAACAA +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLDIPLS*VNESKQ
Trigger: TTGTTTGCTTTCATTAACCAAACTCAGGGGAATGTC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCATCTTCTATCTTATTaGGTGAGGGCAACAGAAAAG +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSHLLSY*VRATEK
Trigger: CTTTTCTGTTGCCCTCACCAAATAAGATAGAAGATG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCCTTCTTTAGAATGTTaGGGAATGTCTGCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSPSLEC*GMSACV
Trigger: AACACAAGCAGACATTCCCAAACATTCTAAAGAAGG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTTTCACACCTGCTTGTaGAAATATCCTCAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLFHTCL*KYPQKG
Trigger: ACCCTTTTGAGGATATTTCAACAAGCAGGTGTGAAA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTGATGATCAAATTTGTTaGCCTGTTGCCAAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLDDQIC*PVAKCL
Trigger: CAAACACTTGGCAACAGGCAAACAAATTTGATCATC...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp ACCGTTCCACATGACAGAAATCAACACTTGTCTGTTTACATTAACCGAGCAGAGACTAAGGAAAGACCCTaGAGTCAGAGATTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: TVPHDRNQHLSVYINRAETKERP*SQRFLN
Trigger: ATTCAAAAATCTCTGACTCAAGGGTCTTTCCTTAGT...CTCTGCTCGGTTAATGTAAACAGACAAGTGTTGATTTCTGTCATGTGGAACGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTAGACCAAATGTTCCTTaGAGATTATTCTTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLRPNVP*RLFFSE
Trigger: CTCACTGAAGAATAATCTCAAAGGAACATTTGGTCT...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TGTTTGTACCATTCTACTTTAACGACGTGTTTCCGACATGATTCCCTTTACTCCCTGAACTATAAAGCATaGTGTATACCACGTTTTGTC +
Preference number: 5 (lower is better)
Translates to: CLYHSTLTTCFRHDSLYSLNYKA*CIPRFV
Trigger: GACAAAACGTGGTATACACAATGCTTTATAGTTCAG...GGAGTAAAGGGAATCATGTCGGAAACACGTCGTTAAAGTAGAATGGTACAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp AGATCAACGGAGATGAATAATTGTGCACAAATACACGAGCAACAGCATTGGCTTTCCAAAGTTGGTATTTaGAAGTTCCACATTACTCTG +
Preference number: 5 (lower is better)
Translates to: RSTEMNNCAQIHEQQHWLSKVGI*KFHITL
Trigger: CAGAGTAATGTGGAACTTCAAAATACCAACTTTGGA...AAGCCAATGCTGTTGCTCGTGTATTTGTGCACAATTATTCATCTCCGTTGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS-3UTR CAA 90 bp TATATCACCTTTTATGACTTGGCTTTGGAAATCACATGGCATCACTTCCATAGTCATCTTCTATCTTATTaGGTGAGGGCAACAGAAAAG +
Preference number: 5 (lower is better)
Translates to: YITFYDLALEITWHHFHSHLLSY*VRATEK
Trigger: CTTTTCTGTTGCCCTCACCAAATAAGATAGAAGATG...ACTATGGAAGTGATGCCATGTGATTTCCAAAGCCAAGTCATAAAAGGTGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 72 bp TCAGTCCGCTCCTGGAGGGGCTTGACTCCCGCAGCCTaGCGCCCGCCTCACGGTGACAGCCCGCCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: SVRSWRGLTPAA*RPPHGDSPPGR
Trigger: GCGCCCGGGCGGGCTGTCACCGTGAGGCGGGCGGCAGGCTGCGGGAGTCAAGCCCCTCCAGGAGCGGACTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS GCA 72 bp CCGCTGCCGCAGCCGCAGCACGGCGGCCAGCGGCTCTaGGTGGTGGTACAGCATGGCGTTCTCCTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: PLPQPQHGGQRL*VVVQHGVLLLD
Trigger: ATCCAGCAGGAGAACGCCATGCTGTACCACCACGCAGAGCCGCTGGCCGCCGTGCTGCGGCTGCGGCAGCGG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 72 bp TGCGGCGGAGATCCTCTGCCACCGCTGCCCGGCAGCTaGACAAATAGGCTCGGAGCGACTTCAGCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: CGGDPLPPLPGS*TNRLGATSAAA
Trigger: GGCAGCGGCTGAAGTCGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 72 bp GGGGAAAATTCTGCGGCGGAGATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATAGGCTCGGAGCGACTT +
Preference number: 6 (lower is better)
Translates to: GENSAAEILCHR*PAAEQIGSERL
Trigger: AAGTCGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAATTTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS GCA 72 bp CTGGTCATTTCTGCGGCGGAGATCCTCTGCCACCGCTaGCCGGCAGCTGAACAAATAGGCTCGGAGCGACTT +
Preference number: 6 (lower is better)
Translates to: LVISAAEILCHR*PAAEQIGSERL
Trigger: AAGTCGCTCCGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAAATGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 72 bp TGCATGCTGCTGGTCATTTCTGCGGCGGAGATCCTCTaGCACCGCTGCCCGGCAGCTGAACAAATAGGCTCG +
Preference number: 6 (lower is better)
Translates to: CMLLVISAAEIL*HRCPAAEQIGS
Trigger: CGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAAATGACCAGCAGCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 72 bp AGCGGCTCTGCGTGGTGGTACAGCATGGCGTTCTCCTaGTGGATGTCGATGAGCGGCTCTTCGTACACGTAC +
Preference number: 6 (lower is better)
Translates to: SGSAWWYSMAFS*WMSMSGSSYTY
Trigger: GTACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGGAGAACGCCATGCTGTACCACCACGCAGAGCCGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 72 bp GGCTCTGCGTGGTGGTACAGCATGGCGTTCTCCTGCTaGATGTCGATGAGCGGCTCTTCGTACACGTACTCC +
Preference number: 6 (lower is better)
Translates to: GSAWWYSMAFSC*MSMSGSSYTYS
Trigger: GGAGTACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGGAGAACGCCATGCTGTACCACCACGCAGAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 90 bp AGATGGCCTGGTGACATGCGGGCCTTGAAGCAATGGCTGCTGCTGTaGCTGCTGCTGCAAAGGCGTGGTTTTGAGGACTACCCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: RWPGDMRALKQWLLL*LLLQRRGFEDYPPV
Trigger: GACTGGAGGGTAGTCCTCAAAACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACCAGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS TCA 72 bp ACATTGGCAGCTATCTTCAGAGCCTCCATCCATTCCTaGGCCCTCTGTCGGGTCTCAGCTCGGAGGCGAAGG +
Preference number: 6 (lower is better)
Translates to: TLAAIFRASIHS*ALCRVSARRRR
Trigger: CCTTCGCCTCCGAGCTGAGACCCGACAGAGGGCTCAGGAATGGATGGAGGCTCTGAAGATAGCTGCCAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 72 bp GTATTCTCTGGGGAAAATTCTGCGGCGGAGATCCTCTaGCACCGCTGCCCGGCAGCTGAACAAATAGGCTCG +
Preference number: 6 (lower is better)
Translates to: VFSGENSAAEIL*HRCPAAEQIGS
Trigger: CGAGCCTATTTGTTCAGCTGCCGGGCAGCGGTGGCAGAGGATCTCCGCCGCAGAATTTTCCCCAGAGAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS CAA 90 bp TCGGGTCTCAGCTCGGAGGCGAAGGACATCCTGGGGGAAAATGACTaGAAAGCAAGAGTCGCAGCCATCCAGGTTGTCCATCTGGACAGC +
Preference number: 6 (lower is better)
Translates to: SGLSSEAKDILGEND*KARVAAIQVVHLDS
Trigger: GCTGTCCAGATGGACAACCTGGATGGCTGCGACTCTTGCTTTCAAGTCATTTTCCCCCAGGATGTCCTTCGCCTCCGAGCTGAGACCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 72 bp AAAAGATGGCCTGGTGACATGCGGGCCTTGAAGCAATaGCTGCTGCTGTTGCTGCTGCTGCAAAGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: KRWPGDMRALKQ*LLLLLLLQRRG
Trigger: ACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 72 bp GGGCAACAGAAAAGATGGCCTGGTGACATGCGGGCCTaGAAGCAATGGCTGCTGCTGTTGCTGCTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: GQQKRWPGDMRA*KQWLLLLLLLQ
Trigger: TTGCAGCAGCAGCAACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS TCA 72 bp GGCAACAGAAAAGATGGCCTGGTGACATGCGGGCCTTaGAGCAATGGCTGCTGCTGTTGCTGCTGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: GNRKDGLVTCGP*SNGCCCCCCCK
Trigger: TTTGCAGCAGCAGCAACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS TCA 72 bp GGTGGTACAGCATGGCGTTCTCCTGCTGGATGTCGATaGGCGGCTCTTCGTACACGTACTCCAGAAACTCCT +
Preference number: 6 (lower is better)
Translates to: GGTAWRSPAGCR*AALRTRTPETP
Trigger: AGGAGTTTCTGGAGTACGTGTACGAAGAGCCGCTCATCGACATCCAGCAGGAGAACGCCATGCTGTACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 72 bp ATGTTCAGTCTCTGCCAGAAAGACTTCTGCTTCTTCTaGAGCTCTCGGCGAACACACCTCGGGCAGGGGACA +
Preference number: 6 (lower is better)
Translates to: MFSLCQKDFCFF*SSRRTHLGQGT
Trigger: TGTCCCCTGCCCGAGGTGTGTTCGCCGAGAGCTGCAGAAGAAGCAGAAGTCTTTCTGGCAGAGACTGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS GCA 72 bp CTCTCGTCCATGTTCAGTCTCTGCCAGAAAGACTTCTaGTTCTTCTGCAGCTCTCGGCGAACACACCTCGGG +
Preference number: 6 (lower is better)
Translates to: LSSMFSLCQKDF*FFCSSRRTHLG
Trigger: CCCGAGGTGTGTTCGCCGAGAGCTGCAGAAGAAGCAGAAGTCTTTCTGGCAGAGACTGAACATGGACGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS CCA 72 bp TCCCGTGCCGAGCTCCCCCGATCCTTCAATCATCTGTaGATCAGGTTAGATTTGGCTGTAGTGCCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: SRAELPRSFNHL*IRLDLAVVPGS
Trigger: AGACCCAGGCACTACAGCCAAATCTAACCTGATCCACAGATGATTGAAGGATCGGGGGAGCTCGGCACGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 72 bp GGAGTCAGGTGTTCTGGTAGGACAGCTCGAACATGGTaGAAGCCTCCTCTAGACTCTCGTCCATGTTCAGTC +
Preference number: 6 (lower is better)
Translates to: GVRCSGRTARTW*KPPLDSRPCSV
Trigger: GACTGAACATGGACGAGAGTCTAGAGGAGGCTTGCACCATGTTCGAGCTGTCCTACCAGAACACCTGACTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS CCA 72 bp GCTGGAGTCAGGTGTTCTGGTAGGACAGCTCGAACATaGTGCAAGCCTCCTCTAGACTCTCGTCCATGTTCA +
Preference number: 6 (lower is better)
Translates to: AGVRCSGRTART*CKPPLDSRPCS
Trigger: TGAACATGGACGAGAGTCTAGAGGAGGCTTGCACCATGTTCGAGCTGTCCTACCAGAACACCTGACTCCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427836.8
ENST00000642765.2
CDS CAA 72 bp GGCTGCTGCTGTTGCTGCTGCTGCAAAGGCGTGGTTTaGAGGACTACCCTCCAGTCCACTTGGGTAATATCT +
Preference number: 6 (lower is better)
Translates to: GCCCCCCCKGVV*RTTLQSTWVIS
Trigger: AGATATTACCCAAGTGGACTGGAGGGTAGTCCTCAAAACCACGCCTTTGCAGCAGCAGCAACAGCAGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 72 bp GTGTATAGTCATCATGATGGCCAAGCCCTGGTGAGATaGTCAGCTCATTCTGCCGCCCCATGTAACCGGGCA +
Preference number: 6 (lower is better)
Translates to: VYSHHDGQALVR*SAHSAAPCNRA
Trigger: TGCCCGGTTACATGGGGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTGGCCATCATGATGACTATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 72 bp AGCTCGGAGGCGAAGGACATCCTGGGGGAAAATGACTaGAAAGCAAGAGTCGCAGCCATCCAGGTTGTCCAT +
Preference number: 6 (lower is better)
Translates to: SSEAKDILGEND*KARVAAIQVVH
Trigger: ATGGACAACCTGGATGGCTGCGACTCTTGCTTTCAAGTCATTTTCCCCCAGGATGTCCTTCGCCTCCGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 72 bp CCCCGATCCTTCAATCATCTGTGGATCAGGTTAGATTaGGCTGTAGTGCCTGGGTCTGCTGCAGGTCGGCAA +
Preference number: 6 (lower is better)
Translates to: PRSFNHLWIRLD*AVVPGSAAGRQ
Trigger: TTGCCGACCTGCAGCAGACCCAGGCACTACAGCCAAATCTAACCTGATCCACAGATGATTGAAGGATCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS TCA 72 bp TGCTGCAGGTCGGCAAGTGAATACAGGTGGATCTGTTaGAGGAGGTATTCTCTGGGGAAAATTCTGCGGCGG +
Preference number: 6 (lower is better)
Translates to: CCRSASEYRWIC*RRYSLGKILRR
Trigger: CCGCCGCAGAATTTTCCCCAGAGAATACCTCCTTCAACAGATCCACCTGTATTCACTTGCCGACCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS GCA 72 bp GTGGATCAGGTTAGATTTGGCTGTAGTGCCTGGGTCTaGTGCAGGTCGGCAAGTGAATACAGGTGGATCTGT +
Preference number: 6 (lower is better)
Translates to: VDQVRFGCSAWV*CRSASEYRWIC
Trigger: ACAGATCCACCTGTATTCACTTGCCGACCTGCAGCAGACCCAGGCACTACAGCCAAATCTAACCTGATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS CCA 72 bp AAAGGCGTGGTTTTGAGGACTACCCTCCAGTCCACTTaGGTAATATCTGATCGTGATCGAGCATGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: KGVVLRTTLQST*VISDRDRACPG
Trigger: GCCAGGGCATGCTCGATCACGATCAGATATTACCCAAGTGGACTGGAGGGTAGTCCTCAAAACCACGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 90 bp TATGATTCTGTGTATAGTCATCATGATGGCCAAGCCCTGGTGAGATaGTCAGCTCATTCTGCCGCCCCATGTAACCGGGCACAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: YDSVYSHHDGQALVR*SAHSAAPCNRAQQH
Trigger: ATGCTGCTGTGCCCGGTTACATGGGGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTGGCCATCATGATGACTATACACAGAATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 72 bp TCTTATTTGGTGAGGGCAACAGAAAAGATGGCCTGGTaGCATGCGGGCCTTGAAGCAATGGCTGCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: SYLVRATEKMAW*HAGLEAMAAAV
Trigger: AACAGCAGCAGCCATTGCTTCAAGGCCCGCATGTCACCAGGCCATCTTTTCTGTTGCCCTCACCAAATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 72 bp CCCTTGCCCAGGGAGGTGACATTTCTCATAGCACCATaGTCTGTTATGTTACTGAGTACCTCATGCCCCACC +
Preference number: 6 (lower is better)
Translates to: PLPREVTFLIAP*SVMLLSTSCPT
Trigger: GGTGGGGCATGAGGTACTCAGTAACATAACAGACAATGGTGCTATGAGAAATGTCACCTCCCTGGGCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 90 bp CAAAGACTGCAGCTGTACACGTGTGAGGTGGCAAATTTAATGACCTaGCCCAAGAATGGAGCCAGCTTTCCCTCTATTACCTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: QRLQLYTCEVANLMT*PKNGASFPSITCCR
Trigger: CCTGCAGCAGGTAATAGAGGGAAAGCTGGCTCCATTCTTGGGCAAGGTCATTAAATTTGCCACCTCACACGTGTACAGCTGCAGTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS TCA 72 bp ATTCTGTGTATAGTCATCATGATGGCCAAGCCCTGGTaGGATTGTCAGCTCATTCTGCCGCCCCATGTAACC +
Preference number: 6 (lower is better)
Translates to: ILCIVIMMAKPW*DCQLILPPHVT
Trigger: GGTTACATGGGGCGGCAGAATGAGCTGACAATCTCACCAGGGCTTGGCCATCATGATGACTATACACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 72 bp TGGCGTTTGTTCTTCCTGAGTTCATGCCCACCCATTTaGTCCTTGGGTTTGTTCCTCAGTGTGACTTGCAGG +
Preference number: 6 (lower is better)
Translates to: WRLFFLSSCPPI*SLGLFLSVTCR
Trigger: CCTGCAAGTCACACTGAGGAACAAACCCAAGGATCAAATGGGTGGGCATGAACTCAGGAAGAACAAACGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 72 bp TTGAAGTATCCCAGTTGTGGACTATGCGTGCTGGAATaGGAAAGCTGTCATCCACGTGGCAGCTACTGCAGT +
Preference number: 6 (lower is better)
Translates to: LKYPSCGLCVLE*ESCHPRGSYCS
Trigger: ACTGCAGTAGCTGCCACGTGGATGACAGCTTTCTCATTCCAGCACGCATAGTCCACAACTGGGATACTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 72 bp CCCCTTCTGGCTACAAAGACTGCAGCTGTACACGTGTaGGGTGGCAAATTTAATGACCTTGCCCAAGAATGG +
Preference number: 6 (lower is better)
Translates to: PLLATKTAAVHV*GGKFNDLAQEW
Trigger: CCATTCTTGGGCAAGGTCATTAAATTTGCCACCTCACACGTGTACAGCTGCAGTCTTTGTAGCCAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS CCA 72 bp CACCCAACCAAGAGGGGTGCTTCAGCAATAGAGCTATaGAAACAACTGGAAGAAACCTTCATTGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: HPTKRGASAIEL*KQLEETFIGLP
Trigger: AGGGAGCCCAATGAAGGTTTCTTCCAGTTGTTTCCATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS TCA 72 bp CAGCTTTCCCTCTATTACCTGCTGCAGGTCGGCAAGTaGATACAGGTGGATCTGTTGAAGGAGGTATTCTCT +
Preference number: 6 (lower is better)
Translates to: QLSLYYLLQVGK*IQVDLLKEVFS
Trigger: AGAGAATACCTCCTTCAACAGATCCACCTGTATTCACTTGCCGACCTGCAGCAGGTAATAGAGGGAAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS GCA 72 bp CAGTCCACTTGGGTAATATCTGATCGTGATCGAGCATaGCCTGGCTTGAAAGTTGAGGTCTCATCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: QSTWVISDRDRA*PGLKVEVSSSK
Trigger: CTTACTGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCGATCACGATCAGATATTACCCAAGTGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CCA 72 bp ATGGAAACAACTGGAAGAAACCTTCATTGGGCTCCCTaGAGCAGGCCAAACCCAAAGTGGTTGATGTTTTCC +
Preference number: 6 (lower is better)
Translates to: METTGRNLHWAP*SRPNPKWLMFS
Trigger: GGAAAACATCAACCACTTTGGGTTTGGCCTGCTCCAGGGAGCCCAATGAAGGTTTCTTCCAGTTGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CCA 72 bp GTCGTCAAAATGCTCAGGAAGCTGGTAGTCACAGATTaGCGTTTGTTCTTCCTGAGTTCATGCCCACCCATT +
Preference number: 6 (lower is better)
Translates to: VVKMLRKLVVTD*RLFFLSSCPPI
Trigger: AATGGGTGGGCATGAACTCAGGAAGAACAAACGCCAATCTGTGACTACCAGCTTCCTGAGCATTTTGACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 72 bp TTGGCGTTTGTTCTTCCTGAGTTCATGCCCACCCATTaGATCCTTGGGTTTGTTCCTCAGTGTGACTTGCAG +
Preference number: 6 (lower is better)
Translates to: LAFVLPEFMPTH*ILGFVPQCDLQ
Trigger: CTGCAAGTCACACTGAGGAACAAACCCAAGGATCAAATGGGTGGGCATGAACTCAGGAAGAACAAACGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 72 bp AGTCGTCAAAATGCTCAGGAAGCTGGTAGTCACAGATaGGCGTTTGTTCTTCCTGAGTTCATGCCCACCCAT +
Preference number: 6 (lower is better)
Translates to: SRQNAQEAGSHR*AFVLPEFMPTH
Trigger: ATGGGTGGGCATGAACTCAGGAAGAACAAACGCCAATCTGTGACTACCAGCTTCCTGAGCATTTTGACGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 72 bp ATGAGCGGCTCTTCGTACACGTACTCCAGAAACTCCTaGGCCTGCTTCGACACCTTATACTTTGAAGTATCC +
Preference number: 6 (lower is better)
Translates to: MSGSSYTYSRNS*ACFDTLYFEVS
Trigger: GGATACTTCAAAGTATAAGGTGTCGAAGCAGGCCAAGGAGTTTCTGGAGTACGTGTACGAAGAGCCGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 72 bp CAGCTGTACACGTGTGAGGTGGCAAATTTAATGACCTaGCCCAAGAATGGAGCCAGCTTTCCCTCTATTACC +
Preference number: 6 (lower is better)
Translates to: QLYTCEVANLMT*PKNGASFPSIT
Trigger: GGTAATAGAGGGAAAGCTGGCTCCATTCTTGGGCAAGGTCATTAAATTTGCCACCTCACACGTGTACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS CAA 90 bp CAGTCCACTTGGGTAATATCTGATCGTGATCGAGCATGCCCTGGCTaGAAAGTTGAGGTCTCATCCAGTAAGTCATTTACAGAACGAGGC +
Preference number: 6 (lower is better)
Translates to: QSTWVISDRDRACPG*KVEVSSSKSFTERG
Trigger: GCCTCGTTCTGTAAATGACTTACTGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCGATCACGATCAGATATTACCCAAGTGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 90 bp AGTCACAGATTGGCGTTTGTTCTTCCTGAGTTCATGCCCACCCATTaGATCCTTGGGTTTGTTCCTCAGTGTGACTTGCAGGTTTTGCTC +
Preference number: 6 (lower is better)
Translates to: SHRLAFVLPEFMPTH*ILGFVPQCDLQVLL
Trigger: GAGCAAAACCTGCAAGTCACACTGAGGAACAAACCCAAGGATCAAATGGGTGGGCATGAACTCAGGAAGAACAAACGCCAATCTGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 72 bp TGTTTTGGACAGTCAGCCTGTAGAGAGTCCCTGATTTaGGGATGTTTTGGTACTGTTTGGAGCTGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: CFGQSACRESLI*GCFGTVWSCPG
Trigger: TCCTGGACAGCTCCAAACAGTACCAAAACATCCTCAAATCAGGGACTCTCTACAGGCTGACTGTCCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 72 bp AGCCATAAGGTAAGCCCTGCTCAGCACAAATGTAAATaGCTTCCAGTTGTTTTGGACAGTCAGCCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: SHKVSPAQHKCK*LPVVLDSQPVE
Trigger: CTCTACAGGCTGACTGTCCAAAACAACTGGAAGGCATTTACATTTGTGCTGAGCAGGGCTTACCTTATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 72 bp AAACAGATATGCTCTGGAAGTGTGAAAGCTGGTACGTaGCATAAAGGTTTTGATTCCCACTGCTGTCGAGGC +
Preference number: 6 (lower is better)
Translates to: KQICSGSVKAGT*HKGFDSHCCRG
Trigger: GCCTCGACAGCAGTGGGAATCAAAACCTTTATGCCACGTACCAGCTTTCACACTTCCAGAGCATATCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CCA 72 bp GCTGAGTGTTGTCATACAAAACAGTATCCACCATCCTaGCCTCCAGGTTGCCTAAAACAGATATGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: AECCHTKQYPPS*PPGCLKQICSG
Trigger: TCCAGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTGTTTTGTATGACAACACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 72 bp TCTCCATTGTTACAGATTTCACAGATGAACCCCTTCTaGCTACAAAGACTGCAGCTGTACACGTGTGAGGTG +
Preference number: 6 (lower is better)
Translates to: SPLLQISQMNPF*LQRLQLYTCEV
Trigger: CACCTCACACGTGTACAGCTGCAGTCTTTGTAGCCAGAAGGGGTTCATCTGTGAAATCTGTAACAATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000642765.2
ENST00000646350.1
CDS CAA 72 bp GCCTGCTTCGACACCTTATACTTTGAAGTATCCCAGTaGTGGACTATGCGTGCTGGAATGAGAAAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ACFDTLYFEVSQ*WTMRAGMRKLS
Trigger: TGACAGCTTTCTCATTCCAGCACGCATAGTCCACAACTGGGATACTTCAAAGTATAAGGTGTCGAAGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 90 bp CAAAGACAAAGTCGTCAAAATGCTCAGGAAGCTGGTAGTCACAGATaGGCGTTTGTTCTTCCTGAGTTCATGCCCACCCATTTGATCCTT +
Preference number: 6 (lower is better)
Translates to: QRQSRQNAQEAGSHR*AFVLPEFMPTHLIL
Trigger: AAGGATCAAATGGGTGGGCATGAACTCAGGAAGAACAAACGCCAATCTGTGACTACCAGCTTCCTGAGCATTTTGACGACTTTGTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS TCA 72 bp AAGTCATTTACAGAACGAGGCCGGTCCCTCCGACGCTaGCAGATATTGAAGAAATTAAAGGTTGATGCTTCC +
Preference number: 6 (lower is better)
Translates to: KSFTERGRSLRR*QILKKLKVDAS
Trigger: GGAAGCATCAACCTTTAATTTCTTCAATATCTGTCAGCGTCGGAGGGACCGGCCTCGTTCTGTAAATGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS TCA 72 bp TGCTGCAGGTCGGCAAGTGAATACAGGTGGATCTGTTaGAGGAGGTATTCTCTGGGGAAAATTCTCCAAAAA +
Preference number: 6 (lower is better)
Translates to: CCRSASEYRWIC*RRYSLGKILQK
Trigger: TTTTTGGAGAATTTTCCCCAGAGAATACCTCCTTCAACAGATCCACCTGTATTCACTTGCCGACCTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000457206.1
ENST00000645881.1
CDS GCA 72 bp CATACAAAACAGTATCCACCATCCTGGCCTCCAGGTTaGCTAAAACAGATATGCTCTGGAAGTGTGAAAGCT +
Preference number: 6 (lower is better)
Translates to: HTKQYPPSWPPG*LKQICSGSVKA
Trigger: AGCTTTCACACTTCCAGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTGTTTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CCA 72 bp TGCTTCGACACCTTATACTTTGAAGTATCCCAGTTGTaGACTATGCGTGCTGGAATGAGAAAGCTGTCATCC +
Preference number: 6 (lower is better)
Translates to: CFDTLYFEVSQL*TMRAGMRKLSS
Trigger: GGATGACAGCTTTCTCATTCCAGCACGCATAGTCCACAACTGGGATACTTCAAAGTATAAGGTGTCGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS CAA 72 bp TCATACAAAACAGTATCCACCATCCTGGCCTCCAGGTaGCCTAAAACAGATATGCTCTGGAAGTGTGAAAGC +
Preference number: 6 (lower is better)
Translates to: SYKTVSTILASR*PKTDMLWKCES
Trigger: GCTTTCACACTTCCAGAGCATATCTGTTTTAGGCAACCTGGAGGCCAGGATGGTGGATACTGTTTTGTATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000427836.8
ENST00000447645.5
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
ENST00000646350.1
CDS GCA 72 bp AAATGGCTTCATGAACATTCACCCAACCAAGAGGGGTaGTTCAGCAATAGAGCTATGGAAACAACTGGAAGA +
Preference number: 6 (lower is better)
Translates to: KWLHEHSPNQEG*FSNRAMETTGR
Trigger: TCTTCCAGTTGTTTCCATAGCTCTATTGCTGAAGCACCCCTCTTGGTTGGGTGAATGTTCATGAAGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 72 bp TGGGTAATATCTGATCGTGATCGAGCATGCCCTGGCTaGAAAGTTGAGGTCTCATCCAGTAAGTCATTTACA +
Preference number: 6 (lower is better)
Translates to: WVISDRDRACPG*KVEVSSSKSFT
Trigger: TGTAAATGACTTACTGGATGAGACCTCAACTTTCAAGCCAGGGCATGCTCGATCACGATCAGATATTACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 90 bp TGGCTAATGGGCATTAACAGATGTATAGGGAGACCAAATGTTCCTTaGAGATTATTCTTCAGTGAGACCTCTGTGAAGACAACAGCAAGT +
Preference number: 6 (lower is better)
Translates to: WLMGINRCIGRPNVP*RLFFSETSVKTTAS
Trigger: ACTTGCTGTTGTCTTCACAGAGGTCTCACTGAAGAATAATCTCAAAGGAACATTTGGTCTCCCTATACATCTGTTAATGCCCATTAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 72 bp GGCATTAACAGATGTATAGGGAGACCAAATGTTCCTTaGAGATTATTCTTCAGTGAGACCTCTGTGAAGACA +
Preference number: 6 (lower is better)
Translates to: GINRCIGRPNVP*RLFFSETSVKT
Trigger: TGTCTTCACAGAGGTCTCACTGAAGAATAATCTCAAAGGAACATTTGGTCTCCCTATACATCTGTTAATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427836.8
ENST00000457206.1
ENST00000642765.2
ENST00000645881.1
CDS CAA 72 bp GTAATAAATCTGCATATGGGTCTCCGAATCTGCTTGTaGAAATATCCTCAAAAGGGTAGAGGATCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: VINLHMGLRICL*KYPQKGRGSLH
Trigger: ATGGAGAGATCCTCTACCCTTTTGAGGATATTTCAACAAGCAGATTCGGAGACCCATATGCAGATTTATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447645.5
ENST00000646350.1
CDS CAA 72 bp CTTGTAATAAATCTGCATATGGGTCTCCGAATCTGCTaGTTGAAATATCCTCAAAAGGGTAGAGGATCTCTC +
Preference number: 6 (lower is better)
Translates to: LVINLHMGLRIC*LKYPQKGRGSL
Trigger: GAGAGATCCTCTACCCTTTTGAGGATATTTCAACAAGCAGATTCGGAGACCCATATGCAGATTTATTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447645.5
ENST00000646350.1
CDS GCA 72 bp ATCCTTGTAATAAATCTGCATATGGGTCTCCGAATCTaGTTGTTGAAATATCCTCAAAAGGGTAGAGGATCT +
Preference number: 6 (lower is better)
Translates to: ILVINLHMGLRI*LLKYPQKGRGS
Trigger: AGATCCTCTACCCTTTTGAGGATATTTCAACAAGCAGATTCGGAGACCCATATGCAGATTTATTACAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447645.5
ENST00000646350.1