Pregenerated sensors for PLEKHM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000225190Ensembl transcript IDs: ENST00000430334.8, ENST00000579131.5, ENST00000579197.5, ENST00000580205.1, ENST00000581932.2, ENST00000582035.1, ENST00000586562.5, ENST00000613787.3, ENST00000617688.2, ENST00000628743.2, ENST00000629866.1, ENST00000630446.1, ENST00000630781.2, ENST00000631843.1, ENST00000632207.1, ENST00000632345.1, ENST00000632439.1, ENST00000633411.1, ENST00000633538.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAGGGCCTCAAACCTGCTaGCTCCGAGGGCACCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPGPQTC*LRGHLR Trigger: CCGAAGGTGCCCTCGGAGGCAGCAGGTTTGAGGCCC...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATCTGTTCCTGGTACTTaGGCCGGCGGGCACAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPSVPGT*AGGHSG Trigger: CCCGCTGTGCCCGCCGGCGCAAGTACCAGGAACAGA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCACCAGGGCCTCAAACCTaGTGCCTCCGAGGGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPPGPQT*CLRGHL Trigger: AAGGTGCCCTCGGAGGCAGCAGGTTTGAGGCCCTGG...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAGACCCCGGAATGGGTTaGACAGTCCCATCTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPDPGMG*TVPSVS Trigger: GGAGACAGATGGGACTGTCCAACCCATTCCGGGGTC...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAGGTGGAGCGTTAATGTaGGCCATGGCGGTGCATAAC | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPGGALM*AMAVHN Trigger: GTTATGCACCGCCATGGCCCACATTAACGCTCCACC...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAAGGCTGGGCTTGTGGTaGAGCGTTAATGTGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPRLGLW*SVNVGH Trigger: ATGGCCCACATTAACGCTCCACCACAAGCCCAGCCT...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR TCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATGCACTCGGCACACCTaGCTGTGGTGTCAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPCTRHT*LWCQTQ Trigger: TTGAGTTTGACACCACAGTCAGGTGTGCCGAGTGCA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATCAGGGCCAGAGCCCTaGTCACTAGGAACAGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPSGPEP*SLGTVY Trigger: ATACACTGTTCCTAGTGAGCAGGGCTCTGGCCCTGA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATTCATACACCCCGTCTaGGATCTGTTGGAGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPFIHPV*DLLEVS Trigger: GCTGACCTCCAACAGATCGCAGACGGGGTGTATGAA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCACCGTCTGCGATCTGTTaGAGGTCAGCAACACTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPPSAIC*RSATLN Trigger: GTTCAGTGTTGCTGACCTCCAACAGATCGCAGACGG...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAAAAATGTTCTGTTCCTaGTACTTGCGCCGGCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPKMFCS*YLRRRA Trigger: TGCCCGCCGGCGCAAGTACCAGGAACAGAACATTTT...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR GCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATCCAACAATACCTCTTaGAGAGACCGGTCTGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPSNNTS*RDRSES Trigger: GGACTCAGACCGGTCTCTGCAAGAGGTATTGTTGGA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR CAA 90 bp | TGCAAAATCATTCAAAACTCACACGGCAGCAATTCCTTCAATACATaGCAAAGACTCCTCAGGGCCAGAGCCCTGCTCACTAGGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: CKIIQNSHGSNSFNT*QRLLRARALLTRNS Trigger: ACTGTTCCTAGTGAGCAGGGCTCTGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTTGAATGATTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR TCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAAAGAGTCAATGCATCTaGAAGCACTGGCAGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPKSQCI*KHWQLL Trigger: CAGAAGCTGCCAGTGCTTTCAGATGCATTGACTCTT...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATTCTGTTCCTGGTACTaGCGCCGGCGGGCACAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPFCSWY*RRRAQR Trigger: CCGCTGTGCCCGCCGGCGCAAGTACCAGGAACAGAA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCACTGTGGTTGAGCCTCTaGCTGAGCTCCTTCAGGGCG | + |
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Preference number: 3 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPLWLSL*LSSFRA Trigger: CGCCCTGAAGGAGCTCAGCAAGAGGCTCAACCACAG...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAAGACCCCGGAATGGGTaGGACAGTCCCATCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPRPRNG*DSPICL Trigger: GAGACAGATGGGACTGTCCAACCCATTCCGGGGTCT...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCACTGACTAGGCTGGGCTaGTGGTGGAGCGTTAATGTG | + |
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Preference number: 3 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPLTRLG*WWSVNV Trigger: CACATTAACGCTCCACCACAAGCCCAGCCTAGTCAG...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCACCCGTCTGCGATCTGTaGGAGGTCAGCAACACTGAA | + |
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Preference number: 3 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPPVCDL*EVSNTE Trigger: TTCAGTGTTGCTGACCTCCAACAGATCGCAGACGGG...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATCTGAGATCCAGCTCTaGTTTTTCGGACTGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPSEIQL*FFGLVG Trigger: ACCCACCAGTCCGAAAAACAAGAGCTGGATCTCAGA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000579197.5 ENST00000628743.2 ENST00000631843.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAAATTCCTTCAATACATaGCAAAGACTCCTCAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPNSFNT*QRLLRA Trigger: GGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATT...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430334.8 ENST00000579197.5 ENST00000613787.3 ENST00000617688.2 ENST00000628743.2 ENST00000631843.1 |
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| CDS-3UTR CCA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCAGAGATGATGTGTTTGTaGGTGACAGCTTTCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPEMMCL*VTAFRR Trigger: CCTCCTGAAAGCTGTCACCCACAAACACATCATCTC...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430334.8 ENST00000613787.3 ENST00000617688.2 |
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| CDS CCA 90 bp | GGGACAGCAATGCACAGGATATGGCCTCTGCCCTCCTGTGGCCCCTaGTTTGGCCGAGGGACAGACATTCAAGTGTCTGGTTTCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: GTAMHRIWPLPSCGP*FGRGTDIQVSGFSA Trigger: AGCACTGAAACCAGACACTTGAATGTCTGTCCCTCGGCCAAACCAGGGGCCACAGGAGGGCAGAGGCCATATCCTGTGCATTGCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579131.5 ENST00000630781.2 ENST00000632345.1 |
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| CDS TCA 90 bp | TTCCCTCCTGCTGCCAGGGATGAACCAAGTGTGCTTCTTTCTGCGTaGGGCCAAACCCTCCATTTGTGCAGGAGGTCTCTCCCTTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FPPAARDEPSVLLSA*GQTLHLCRRSLPWP Trigger: TGGCCAAGGGAGAGACCTCCTGCACAAATGGAGGGTTTGGCCTCACGCAGAAAGAAGCACACTTGGTTCATCCCTGGCAGCAGGAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS CCA 90 bp | ACAAGGAGCAGTCCTCTCCTCTGTCACTGCTTTCTTCCTTCTCTATaGGGTGACTCCCATCGGCACACATGCACGCTGTCATTTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: TRSSPLLCHCFLPSL*GDSHRHTCTLSFLP Trigger: TGGGAGAAATGACAGCGTGCATGTGTGCCGATGGGAGTCACCCCATAGAGAAGGAAGAAAGCAGTGACAGAGGAGAGGACTGCTCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS TCA 90 bp | GAGCAGTCCTCTCCTCTGTCACTGCTTTCTTCCTTCTCTATGGGGTaGCTCCCATCGGCACACATGCACGCTGTCATTTCTCCCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: EQSSPLSLLSSFSMG*LPSAHMHAVISPIF Trigger: AAAGATGGGAGAAATGACAGCGTGCATGTGTGCCGATGGGAGTCACCCCATAGAGAAGGAAGAAAGCAGTGACAGAGGAGAGGACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS GCA 90 bp | GACAGGAGTGACATGTCTACAAGCCAAGGAATGCAAACGAGCACCTaGAACGCCACCCAGGAGAAAGGCGGGAACAGATTCTTCCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: DRSDMSTSQGMQTST*NATQEKGGNRFFLR Trigger: TCTAAGGAAGAATCTGTTCCCGCCTTTCTCCTGGGTGGCGTTGCAGGTGCTCGTTTGCATTCCTTGGCTTGTAGACATGTCACTCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580205.1 ENST00000630446.1 ENST00000633411.1 |
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| CDS-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCACCCACCAGCTTCTTCTaGATGACCGGGATGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPPTSFF*MTGMAA Trigger: GGCTGCCATCCCGGTCATCAAGAAGAAGCTGGTGGG...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430334.8 ENST00000613787.3 ENST00000617688.2 |
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| CDS GCA 90 bp | GGTCAGCCCTTCTGTAAAGGGCCAGATAGTATATTCTTCAGGCTTTaGAGGCCACACAACCTCTGTTGTAACTATGTAACTCTGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GQPFCKGPDSIFFRL*RPHNLCCNYVTLPQ Trigger: CTGGGGCAGAGTTACATAGTTACAACAGAGGTTGTGTGGCCTGCAAAGCCTGAAGAATATACTATCTGGCCCTTTACAGAAGGGCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581932.2 ENST00000633538.1 |
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| CDS TCA 90 bp | AGACAGAGATACAGAGGAAGAACTTGTATGACAGTAGAACATGTGTaGCAGCAGAGGGGAGACAGGAGTGACATGTCTACAAGCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: RQRYRGRTCMTVEHV*QQRGDRSDMSTSQG Trigger: TCCTTGGCTTGTAGACATGTCACTCCTGTCTCCCCTCTGCTGTCACACATGTTCTACTGTCATACAAGTTCTTCCTCTGTATCTCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000580205.1 ENST00000630446.1 ENST00000633411.1 |
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| CDS CCA 90 bp | CTCTATGTTTCCCTTCTTGAGGAACTACCAAGCTGTTTTCCAAAGTaGCCGCACCATTTTATATTCCCACCAGCAATGTACGAGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LYVSLLEELPSCFPK*PHHFIFPPAMYEGS Trigger: GGAACCCTCGTACATTGCTGGTGGGAATATAAAATGGTGCGGCCACTTTGGAAAACAGCTTGGTAGTTCCTCAAGAAGGGAAACATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000580205.1 ENST00000630446.1 ENST00000633411.1 |
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| CDS-3UTR CAA 90 bp | AAAACTCACACGGCAGCAATTCCTTCAATACATTGCAAAGACTCCTCAGGGCCATCTGAGATGATGTGTTaGTGGGTGACAGCTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KTHTAAIPSIHCKDSSGPSEMMC*WVTAFR Trigger: CCTGAAAGCTGTCACCCACAAACACATCATCTCAGA...TGGCCCTGAGGAGTCTTTGCAATGTATTGAAGGAATTGCTGCCGTGTGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430334.8 ENST00000613787.3 ENST00000617688.2 |
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| CDS CCA 72 bp | CAGGATATGGCCTCTGCCCTCCTGTGGCCCCTGGTTTaGCCGAGGGACAGACATTCAAGTGTCTGGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QDMASALLWPLV*PRDRHSSVWFQ Trigger: CTGAAACCAGACACTTGAATGTCTGTCCCTCGGCCAAACCAGGGGCCACAGGAGGGCAGAGGCCATATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579131.5 ENST00000630781.2 ENST00000632345.1 |
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| CDS CCA 72 bp | ATGCACAGGATATGGCCTCTGCCCTCCTGTGGCCCCTaGTTTGGCCGAGGGACAGACATTCAAGTGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: MHRIWPLPSCGP*FGRGTDIQVSG Trigger: ACCAGACACTTGAATGTCTGTCCCTCGGCCAAACCAGGGGCCACAGGAGGGCAGAGGCCATATCCTGTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579131.5 ENST00000630781.2 ENST00000632345.1 |
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| CDS CAA 90 bp | CAGCAATGCACAGGATATGGCCTCTGCCCTCCTGTGGCCCCTGGTTaGGCCGAGGGACAGACATTCAAGTGTCTGGTTTCAGTGCTACAC | + |
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Preference number: 6 (lower is better) Translates to: QQCTGYGLCPPVAPG*AEGQTFKCLVSVLH Trigger: GTGTAGCACTGAAACCAGACACTTGAATGTCTGTCCCTCGGCCAAACCAGGGGCCACAGGAGGGCAGAGGCCATATCCTGTGCATTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579131.5 ENST00000630781.2 ENST00000632345.1 |
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| CDS CCA 72 bp | GGCCAAACCCTCCATTTGTGCAGGAGGTCTCTCCCTTaGCCAACTACTCAAGGACAAGGAGCAGTCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GQTLHLCRRSLP*PTTQGQGAVLS Trigger: GGAGAGGACTGCTCCTTGTCCTTGAGTAGTTGGCCAAGGGAGAGACCTCCTGCACAAATGGAGGGTTTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS CCA 72 bp | GTAGTCCCAGCTACCCAGCTACTCGGGAGGTTGAGGTaGAAGGATAGCTTGAGCTGCTTCTGCAAGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VVPATQLLGRLR*KDSLSCFCKAF Trigger: GAAGGCCTTGCAGAAGCAGCTCAAGCTATCCTTCCACCTCAACCTCCCGAGTAGCTGGGTAGCTGGGACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000586562.5 ENST00000629866.1 ENST00000632439.1 |
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| CDS CAA 72 bp | ACAGGATATGGCCTCTGCCCTCCTGTGGCCCCTGGTTaGGCCGAGGGACAGACATTCAAGTGTCTGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TGYGLCPPVAPG*AEGQTFKCLVS Trigger: TGAAACCAGACACTTGAATGTCTGTCCCTCGGCCAAACCAGGGGCCACAGGAGGGCAGAGGCCATATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579131.5 ENST00000630781.2 ENST00000632345.1 |
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| CDS TCA 72 bp | GCTGCCAGGGATGAACCAAGTGTGCTTCTTTCTGCGTaGGGCCAAACCCTCCATTTGTGCAGGAGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AARDEPSVLLSA*GQTLHLCRRSL Trigger: GAGAGACCTCCTGCACAAATGGAGGGTTTGGCCTCACGCAGAAAGAAGCACACTTGGTTCATCCCTGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS GCA 72 bp | ACGCCTTCCCTCCTGCTGCCAGGGATGAACCAAGTGTaGTTCTTTCTGCGTGAGGCCAAACCCTCCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: TPSLLLPGMNQV*FFLREAKPSIC Trigger: ACAAATGGAGGGTTTGGCCTCACGCAGAAAGAAGCACACTTGGTTCATCCCTGGCAGCAGGAGGGAAGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS CAA 72 bp | AGGCCAAACCCTCCATTTGTGCAGGAGGTCTCTCCCTaGGCCAACTACTCAAGGACAAGGAGCAGTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RPNPPFVQEVSP*ANYSRTRSSPL Trigger: GAGAGGACTGCTCCTTGTCCTTGAGTAGTTGGCCAAGGGAGAGACCTCCTGCACAAATGGAGGGTTTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS TCA 72 bp | TCTCCTCTGTCACTGCTTTCTTCCTTCTCTATGGGGTaGCTCCCATCGGCACACATGCACGCTGTCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: SPLSLLSSFSMG*LPSAHMHAVIS Trigger: AGAAATGACAGCGTGCATGTGTGCCGATGGGAGTCACCCCATAGAGAAGGAAGAAAGCAGTGACAGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS GCA 72 bp | GGGAACATCCCCATTCTCACCGTCCACTGCTGCTCTTaGGTCCTGTATTTCACTGAGAAAATAAGAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: GNIPILTVHCCS*VLYFTEKIRAP Trigger: GGGTGCTCTTATTTTCTCAGTGAAATACAGGACGCAAGAGCAGCAGTGGACGGTGAGAATGGGGATGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS GCA 72 bp | CTTCCTTCTCTATGGGGTGACTCCCATCGGCACACATaGACGCTGTCATTTCTCCCATCTTTAGAAACACCT | + |
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Preference number: 6 (lower is better) Translates to: LPSLWGDSHRHT*TLSFLPSLETP Trigger: AGGTGTTTCTAAAGATGGGAGAAATGACAGCGTGCATGTGTGCCGATGGGAGTCACCCCATAGAGAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS GCA 72 bp | CTGGATGGGAACATCCCCATTCTCACCGTCCACTGCTaGTCTTGCGTCCTGTATTTCACTGAGAAAATAAGA | + |
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Preference number: 6 (lower is better) Translates to: LDGNIPILTVHC*SCVLYFTEKIR Trigger: TCTTATTTTCTCAGTGAAATACAGGACGCAAGAGCAGCAGTGGACGGTGAGAATGGGGATGTTCCCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS GCA 72 bp | AAGCTGGATGGGAACATCCCCATTCTCACCGTCCACTaGTGCTCTTGCGTCCTGTATTTCACTGAGAAAATA | + |
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Preference number: 6 (lower is better) Translates to: KLDGNIPILTVH*CSCVLYFTEKI Trigger: TATTTTCTCAGTGAAATACAGGACGCAAGAGCAGCAGTGGACGGTGAGAATGGGGATGTTCCCATCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000582035.1 ENST00000632207.1 |
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| CDS CAA 90 bp | AAGAGAGGAGAACACCAAGTGAAGACAGAGATACAGAGGAAGAACTaGTATGACAGTAGAACATGTGTGACAGCAGAGGGGAGACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KRGEHQVKTEIQRKN*YDSRTCVTAEGRQE Trigger: CTCCTGTCTCCCCTCTGCTGTCACACATGTTCTACTGTCATACAAGTTCTTCCTCTGTATCTCTGTCTTCACTTGGTGTTCTCCTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000580205.1 ENST00000630446.1 ENST00000633411.1 |
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| CDS CAA 72 bp | ACTTGCTGGGTCATGTGTAACTCTATGTTTCCCTTCTaGAGGAACTACCAAGCTGTTTTCCAAAGTGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TCWVMCNSMFPF*RNYQAVFQSGR Trigger: GCGGCCACTTTGGAAAACAGCTTGGTAGTTCCTCAAGAAGGGAAACATAGAGTTACACATGACCCAGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000580205.1 ENST00000630446.1 ENST00000633411.1 |
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| CDS CCA 72 bp | TCCCTTCTTGAGGAACTACCAAGCTGTTTTCCAAAGTaGCCGCACCATTTTATATTCCCACCAGCAATGTAC | + |
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Preference number: 6 (lower is better) Translates to: SLLEELPSCFPK*PHHFIFPPAMY Trigger: GTACATTGCTGGTGGGAATATAAAATGGTGCGGCCACTTTGGAAAACAGCTTGGTAGTTCCTCAAGAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000580205.1 ENST00000630446.1 ENST00000633411.1 |
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| CDS CAA 90 bp | TCGATCCACCACATTTGGCTTATCCACTCCTCGGCTGATGGACATTaGGGTTGTTTCTACTTTTTGTCAATTATGAATAGTGCTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: SIHHIWLIHSSADGH*GCFYFLSIMNSAAM Trigger: CATAGCAGCACTATTCATAATTGACAAAAAGTAGAAACAACCCAAATGTCCATCAGCCGAGGAGTGGATAAGCCAAATGTGGTGGATCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000580205.1 ENST00000630446.1 ENST00000633411.1 |
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