RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHJ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104886

Ensembl transcript IDs: ENST00000326631.7, ENST00000585423.5, ENST00000586497.1, ENST00000586608.3, ENST00000587394.6, ENST00000587962.6, ENST00000588356.1, ENST00000588450.1, ENST00000588545.2, ENST00000589097.6, ENST00000589791.5, ENST00000591099.6

Found 474 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTaGGCTCACGCCTGCAAGCCACTCAGCTGGAACCTGGCCTCCTCG +
Preference number: 1 (lower is better)
Translates to: WAGPVPSRCTLTTVP*AHACKPLSWNLASS
Trigger: CGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR GCA 90 bp CATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCCTGCGCTCACGCCTGCAAGCCACTC +
Preference number: 1 (lower is better)
Translates to: HGQAIHGWAGPVPSR*TLTTVPCAHACKPL
Trigger: GAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR TCA 90 bp AAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTaGCCACCGTGCCCTGCGCTCACGCCTGCAAGCCACTCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: KRFMAGQGQSRPAAR*PPCPALTPASHSAG
Trigger: TCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR GCA 90 bp GTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCGCTCACGCCTaGAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATGCCGAAC +
Preference number: 1 (lower is better)
Translates to: VPSRCTLTTVPCAHA*KPLSWNLASSDMPN
Trigger: GTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR CCA 90 bp TCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTaGATCCTGGGGCCCCAGGGAGCGCAGCTTGCTGGGCAGTTTCAT +
Preference number: 1 (lower is better)
Translates to: SWRQQHVAPGARPVR*ILGPQGAQLAGQFH
Trigger: ATGAAACTGCCCAGCAAGCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 90 bp GGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTaGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTG +
Preference number: 1 (lower is better)
Translates to: GSPGPWMHTTQAGHL*EGAYPGGSSTWHQV
Trigger: CACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 90 bp CCACCGTGCCCTGCGCTCACGCCTGCAAGCCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGAACTGTTCCAGGGGGTCCTTGCCCG +
Preference number: 1 (lower is better)
Translates to: PPCPALTPASHSAGT*PPRICRTVPGGPCP
Trigger: CGGGCAAGGACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR CCA 90 bp ACGCTGACCACCGTGCCCTGCGCTCACGCCTGCAAGCCACTCAGCTaGAACCTGGCCTCCTCGGATATGCCGAACTGTTCCAGGGGGTCC +
Preference number: 1 (lower is better)
Translates to: TLTTVPCAHACKPLS*NLASSDMPNCSRGS
Trigger: GGACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR CCA 90 bp GATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGG +
Preference number: 1 (lower is better)
Translates to: DAHNSGRAPVGRRIS*RQQHVAPGARPVRW
Trigger: CCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 90 bp GGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTaGGGCCCCAGGGAGCGCAGCTTGCTGGGCAGTTTCATAAAATGC +
Preference number: 1 (lower is better)
Translates to: GSSTWHQVPGQLGGS*GPRERSLLGSFIKC
Trigger: GCATTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 90 bp AAACCAAAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCC +
Preference number: 1 (lower is better)
Translates to: KPKQNRSRHGQAIHG*AGPVPSRCTLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 90 bp CAGGTGCACAGCCAGGGCCCTCCTGTCTGCAGGAGAATTCACAGCTaGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTTGTCTGGCT +
Preference number: 1 (lower is better)
Translates to: QVHSQGPPVCRRIHS*CGTQPLGHSQLCLA
Trigger: AGCCAGACAAAGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCCTGGCTGTGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 90 bp GCACAGCCAGGGCCCTCCTGTCTGCAGGAGAATTCACAGCTGGTGTaGGACTCAGCCCCTAGGCCATTCACAGCTTTGTCTGGCTCTGTA +
Preference number: 1 (lower is better)
Translates to: AQPGPSCLQENSQLV*DSAPRPFTALSGSV
Trigger: TACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCCTGGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR GCA 90 bp CCCAGGGAGCGCAGCTTGCTGGGCAGTTTCATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAA +
Preference number: 1 (lower is better)
Translates to: PRERSLLGSFIKCSP*PHPPGFRLWMSPNQ
Trigger: TTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: LRQGTCGKAHILAAAARGGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 2 (lower is better)
Translates to: PVGRRISWRQQHVAPGARRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 2 (lower is better)
Translates to: LRQGTCGKAHILAAAARGRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: LGAHQAPGCTQLRQGTCGVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: WRQQHVAPGARPVRWILGVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp GCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCCTGCCCACACCCACCTaGCTTCAGGCTTTGGATGTC +
Preference number: 2 (lower is better)
Translates to: APVGRRISWRQQHVAPGALPTPT*LQALDV
Trigger: GACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG...GGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp TCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCAAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 2 (lower is better)
Translates to: SGRAPVGRRISWRQQHVARSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 2 (lower is better)
Translates to: LQENSQLVWDSAPRPFTAPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: WRQQHVAPGARPVRWILGIKCSP*PHPPGF
Trigger: GAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTAT...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTGGCGGCAGCAGCACGTaGCACCAGGTGCCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LQENSQLVWDSAPRPFTAGGSST*HQVPGQ
Trigger: CTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCC...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CCACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTCGTCCCGCTGCACGCTaGCCACCGTGCCCTGCGCTC +
Preference number: 2 (lower is better)
Translates to: PHPPGFRLWMSPNQKPPTRPAAR*PPCPAL
Trigger: GAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACG...AGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp TTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCACTCTAGCCCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 2 (lower is better)
Translates to: LSPEGQGHSELWHHCTLAPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...GGCTAGAGTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 2 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp GCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 2 (lower is better)
Translates to: AWGLTRPLDAHNSGRAPVGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...CACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 2 (lower is better)
Translates to: QNRSRHGQAIHGWAGPVPQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...CGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTGGCCAAGCGATTCATaGCTGGGCAGGGCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: QNRSRHGQAIHGWAGPVPWPSDS*LGRASP
Trigger: GGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCA...CGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp GCCCCTAGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGGCCATGCCACCAGCCTaGGGGCTCACCAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: APRPFTALSGSVHSFSTGAMPPA*GLTRPL
Trigger: CAGGGGCCTGGTGAGCCCCCAGGCTGGTGGCATGGC...CCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: QGTCGKAHILAAAARGTRKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...CCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp TCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: SCLQENSQLVWDSAPRPFGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...GAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp TGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 2 (lower is better)
Translates to: WMSPNQKPPTENPGVMAGPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...CCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCGGCTCATGCCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 2 (lower is better)
Translates to: QKPPTENPGVMAGCGGSCQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...GCATGAGCCGCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp GGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 2 (lower is better)
Translates to: GHSQLCLALYIHSARGRGQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...CCCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp TGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: WGLTRPLDAHNSGRAPVGKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...TCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp GCCCCTAGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: APRPFTALSGSVHSFSTGGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...CCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp GATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 2 (lower is better)
Translates to: DAHNSGRAPVGRRISWRQGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...CTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp AGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGCACCAGGCCCCTGGATaGACACAACTCAGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: RPFTALSGSVHSFSTGQGHQAPG*TQLRQG
Trigger: GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTG...CCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp AGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 2 (lower is better)
Translates to: RPFTALSGSVHSFSTGQGQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...CCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCCCTGGCTTCAGGCTTTaGATGTCTCCAAACCAAAAA +
Preference number: 2 (lower is better)
Translates to: LRQGTCGKAHILAAAARGPGFRL*MSPNQK
Trigger: TTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTTGGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCA +
Preference number: 2 (lower is better)
Translates to: QENSQLVWDSAPRPFTALGRRIS*RQQHVA
Trigger: TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCC...CAAAGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCAGGCTCACCAGGCCCCTaGATGCACACAACTCAGGCA +
Preference number: 2 (lower is better)
Translates to: PVCRRIHSWCGTQPLGHSGSPGP*MHTTQA
Trigger: TGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCC...TGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp TCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCGGCTCACCAGGCCCCTaGATGCACACAACTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SCLQENSQLVWDSAPRPFGSPGP*MHTTQA
Trigger: TGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCC...GAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 2 (lower is better)
Translates to: LRQGTCGKAHILAAAARGNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCGGCTCATGCAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 2 (lower is better)
Translates to: QKPPTENPGVMAGCGGSCRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...GCATGAGCCGCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGCCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGC +
Preference number: 2 (lower is better)
Translates to: PGCTQLRQGTCGKAHILAPKTSH*KSRCDG
Trigger: GCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGG...CGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp GGGCCCTCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: GPSCLQENSQLVWDSAPRKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...CCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp GGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GHSQLCLALYIHSARGRGVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CCCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGA +
Preference number: 2 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQHSAGT*PPRICR
Trigger: TCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTG...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR-3UTR TCA 90 bp CCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCAGCCTGGGCAACACAGTaGAACCCTGACCCAAAAACC +
Preference number: 2 (lower is better)
Translates to: PVCRRIHSWCGTQPLGHSAWATQ*NPDPKT
Trigger: GGTTTTTGGGTCAGGGTTTCACTGTGTTGCCCAGGC...TGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp GAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCTGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGT +
Preference number: 2 (lower is better)
Translates to: EDHLSPEGQGHSELWHHCWPPRI*RTVPGG
Trigger: ACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCA...GCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR-3UTR CCA 90 bp CAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTTGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: QENSQLVWDSAPRPFTALVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CAAAGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp GGAAAAGAGGTACCTTTATTTGAACAGAACAAGCACCCTGGCCCCAGGGCAACCGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCA +
Preference number: 2 (lower is better)
Translates to: GKEVPLFEQNKHPGPRATGRRIS*RQQHVA
Trigger: TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCC...GGTTGCCCTGGGGCCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp TGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 2 (lower is better)
Translates to: WMSPNQKPPTENPGVMAGRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...CCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp GGAAAAGAGGTACCTTTATTTGAACAGAACAAGCACCCTGGCCCCAGGGCAACCCAGGGCCCTCCTGTCTaGAGGAGAATTCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: GKEVPLFEQNKHPGPRATQGPPV*RRIHSW
Trigger: CCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCCTG...GGTTGCCCTGGGGCCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp GCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGCCCTGCGCTCACGCCTaGAAGCCACTCAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: ASGFGCLQTKNLPLKIQVPCAHA*KPLSWN
Trigger: GTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGG...CACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR-3UTR GCA 90 bp GAAAAGAGGTACCTTTATTTGAACAGAACAAGCACCCTGGCCCCAGGGCAACCACAGGGCCCTCCTGTCTaGAGGAGAATTCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: EKRYLYLNRTSTLAPGQPQGPPV*RRIHSW
Trigger: CCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCCTG...TGGTTGCCCTGGGGCCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR GCA 90 bp GAAAAGAGGTACCTTTATTTGAACAGAACAAGCACCCTGGCCCCAGGGCAACCAATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: EKRYLYLNRTSTLAPGQPIKCSP*PHPPGF
Trigger: GAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTAT...TGGTTGCCCTGGGGCCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CCACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 2 (lower is better)
Translates to: PHPPGFRLWMSPNQKPPTKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...AGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CCA 90 bp CCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACCTGGCTTCAGGCTTTaGATGTCTCCAAACCAAAAA +
Preference number: 2 (lower is better)
Translates to: PVCRRIHSWCGTQPLGHSPGFRL*MSPNQK
Trigger: TTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG...TGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp GAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 2 (lower is better)
Translates to: EDHLSPEGQGHSELWHHCNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...GCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 2 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCACCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGC +
Preference number: 2 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPPKTSH*KSRCDG
Trigger: GCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGG...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR TCA 90 bp CCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 2 (lower is better)
Translates to: PPGFRLWMSPNQKPPTENNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...ATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR TCA 72 bp ATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTaGCCACCGTGCCCTGCGCTCACGCCTGCAAGCCAC +
Preference number: 3 (lower is better)
Translates to: MAGQGQSRPAAR*PPCPALTPASH
Trigger: GTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
3UTR GCA 72 bp GCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCCTGCGCTCACGCCTGC +
Preference number: 3 (lower is better)
Translates to: AIHGWAGPVPSR*TLTTVPCAHAC
Trigger: GCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
3UTR GCA 72 bp CCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTaGGCTCACGCCTGCAAGCCACTCAGCTGGAACCTG +
Preference number: 3 (lower is better)
Translates to: PVPSRCTLTTVP*AHACKPLSWNL
Trigger: CAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR CCA 72 bp ACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTaGGGCCCCAGGGAGCGCAGCTTGCTGGGCAGTTTC +
Preference number: 3 (lower is better)
Translates to: TWHQVPGQLGGS*GPRERSLLGSF
Trigger: GAAACTGCCCAGCAAGCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 72 bp AACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: NSGRAPVGRRIS*RQQHVAPGARP
Trigger: TGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 72 bp GGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTaGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGG +
Preference number: 3 (lower is better)
Translates to: GPWMHTTQAGHL*EGAYPGGSSTW
Trigger: CCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 72 bp CTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTaGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGG +
Preference number: 3 (lower is better)
Translates to: LWEGAYPGGSST*HQVPGQLGGSW
Trigger: CCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp GCCACCAGCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCCCCAGGGAGCGCAGCTaGCTGGGCAGTTTCATAAAA +
Preference number: 3 (lower is better)
Translates to: ATSLGAHQAPGCTQLRQGPRERS*LGSFIK
Trigger: TTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG...GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGCTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 72 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACC +
Preference number: 3 (lower is better)
Translates to: QNRSRHGQAIHG*AGPVPSRCTLT
Trigger: GGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR CCA 72 bp CCTGCGCTCACGCCTGCAAGCCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGAACTGTTCCAGGGGGT +
Preference number: 3 (lower is better)
Translates to: PALTPASHSAGT*PPRICRTVPGG
Trigger: ACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR CCA 72 bp ACCGTGCCCTGCGCTCACGCCTGCAAGCCACTCAGCTaGAACCTGGCCTCCTCGGATATGCCGAACTGTTCC +
Preference number: 3 (lower is better)
Translates to: TVPCAHACKPLS*NLASSDMPNCS
Trigger: GGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
3UTR-3UTR CAA 90 bp CAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: QGTCGKAHILAAAARGTRRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...CCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACACCTGGCTTCAGGCTTaGGATGTCTCCAAACCAAAA +
Preference number: 3 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHTWLQA*DVSKPK
Trigger: TTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGT...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp GCCCCTAGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCCCAGGGAGCGCAGCTaGCTGGGCAGTTTCATAAAA +
Preference number: 3 (lower is better)
Translates to: APRPFTALSGSVHSFSTGPRERS*LGSFIK
Trigger: TTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG...CCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR TCA 72 bp CAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGCCGGGTGTGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: QALDVSKPKTSH*KSRCDGRVWRL
Trigger: GAGCCGCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGACCTGGCTTCAGGCTTaGGATGTCTCCAAACCAAAA +
Preference number: 3 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQTWLQA*DVSKPK
Trigger: TTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGT...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTAGGCCATTCACAGCTTaGTCTGGCTCTGTACATTCA +
Preference number: 3 (lower is better)
Translates to: LQENSQLVWDSAPRPFTARPFTA*SGSVHS
Trigger: TGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp TGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: WMSPNQKPPTENPGVMAGRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...CCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp CCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 3 (lower is better)
Translates to: PPGFRLWMSPNQKPPTENRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...ATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
3UTR-3UTR CAA 90 bp GAAAAGAGGTACCTTTATTTGAACAGAACAAGCACCCTGGCCCCAGGGCAACCAAGGCCATTCACAGCTTaGTCTGGCTCTGTACATTCA +
Preference number: 3 (lower is better)
Translates to: EKRYLYLNRTSTLAPGQPRPFTA*SGSVHS
Trigger: TGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT...TGGTTGCCCTGGGGCCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCGCTCAGCCATGCCACCAGCCTaGGGGCTCACCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LGRASPVPLHADHRALRSAMPPA*GLTRPL
Trigger: CAGGGGCCTGGTGAGCCCCCAGGCTGGTGGCATGGC...TGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGGCCATCTCGGCCGGCTaGCGGGACAGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SWLGRASPVPLHADHRALAISAG*RDRACS
Trigger: GCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGC...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCGCTCACGCCTGCAAGCCAGGCGGCAGCAGCACGTaGCACCAGGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VPSRCTLTTVPCAHACKPGGSST*HQVPGQ
Trigger: CTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCC...TGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GQAIHGWAGPVPSRCTLTPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...GGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCTGGCGACCCGTGGCTaGTGGCGTGGGCGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PVGRRISWRQQHVAPGARLATRG*WRGRGT
Trigger: GGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAG...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGTCCGCTGCGTGGCGCTaGCGACCCGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWSAAWR*RPVAAG
Trigger: GCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGA...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR TCA 90 bp GGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCGAGGACGGGTGGCCATaGGCCAGGGCTGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: GQAIHGWAGPVPSRCTLTEDGWP*ARAGGL
Trigger: CAGTCCTCCAGCCCTGGCTCATGGCCACCCGTCCTC...GGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587962.6
CDS-3UTR TCA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGGGACCGAGGGTTCGTTaGGAGCGTTGTGCGCACGCG +
Preference number: 4 (lower is better)
Translates to: SWLGRASPVPLHADHRALGPRVR*ERCAHA
Trigger: CGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCC...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp CAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCCATCTCGGCCGGCTaGCGGGACAGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QAWPSDSWLGRASPVPLHAISAG*RDRACS
Trigger: GCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGC...GTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACGCCATCTCGGCCGGCTaGCGGGACAGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHAISAG*RDRACS
Trigger: GCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGC...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCGCTCACGCCTGCAAGCCAGGCCCTCTGCAGCCCTaGACACACCTTGCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: VPSRCTLTTVPCAHACKPGPLQP*THLARH
Trigger: GTGACGGGCAAGGTGTGTGCAGGGCTGCAGAGGGCC...TGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587962.6
CDS-3UTR CCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGGCCATGCCACCAGCCTaGGGGCTCACCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: WRQQHVAPGARPVRWILGAMPPA*GLTRPL
Trigger: CAGGGGCCTGGTGAGCCCCCAGGCTGGTGGCATGGC...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCTCCCTCGCGAAAGTTaGCCCCGTGCGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHLPRES*PRAAAA
Trigger: CGCTGCGGCCGCACGGGGCCAACTTTCGCGAGGGAG...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR TCA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SWLGRASPVPLHADHRALGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGCCATCTCGGCCGGCTaGCGGGACAGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HLWEGAYPGGSSTWHQVPAISAG*RDRACS
Trigger: GCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGC...TGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCCCTGCGCTCACGCCTaGAAGCCACTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SWLGRASPVPLHADHRALPCAHA*KPLSWN
Trigger: GTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGG...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GCCACCAGCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCCAGTTAGGTGGATCCTaGGGCCCCAGGGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ATSLGAHQAPGCTQLRQGQLGGS*GPRERS
Trigger: GCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTG...GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGCTGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCAGGCGGCAGCAGCACGTaGCACCAGGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGRAPVGRRISWRQQHVAGGSST*HQVPGQ
Trigger: CTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCC...TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCGGCAGCAGCACGTaGCACCAGGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HLWEGAYPGGSSTWHQVPGGSST*HQVPGQ
Trigger: CTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCC...TGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCAGGAGTAGAGGCGGTTaGGGGCGGCGGCCGACGCGG +
Preference number: 4 (lower is better)
Translates to: PWMHTTQAGHLWEGAYPGRSRGG*GRRPTR
Trigger: CCGCGTCGGCCGCCGCCCTCAACCGCCTCTACTCCT...GCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp AGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RHGQAIHGWAGPVPSRCTSWGPS*PARPPS
Trigger: AGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGA...CGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGCCGCTTCAGCACGCTaGCCTTCTTGGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWAASAR*PSWGPS
Trigger: TGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGC...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACGCCGCTTCAGCACGCTaGCCTTCTTGGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHAASAR*PSWGPS
Trigger: TGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGC...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGCTTCCCGGACGACTCTaGAGCGCTCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HGQAIHGWAGPVPSRCTLLPGRL*SAPAAG
Trigger: CCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAG...CAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCTTCCCGGACGACTCTaGAGCGCTCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVGRRISWRQQHVAPGARLPGRL*SAPAAG
Trigger: CCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAG...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCGCTCACTGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: WAGPVPSRCTLTTVPCAHWPPRI*RTVPGG
Trigger: ACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCA...GTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
CDS-3UTR GCA 90 bp ACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: TDPGMAKRFMAGQGQSRPPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...GGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCCAGTTAGGTGGATCCTaGGGCCCCAGGGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LRQGTCGKAHILAAAARGQLGGS*GPRERS
Trigger: GCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTG...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCAGTTAGGTGGATCCTaGGGCCCCAGGGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RHGQAIHGWAGPVPSRCTQLGGS*GPRERS
Trigger: GCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTG...CGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCGCTCACGCCTGCAAGCCATGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VPSRCTLTTVPCAHACKPWPPRI*RTVPGG
Trigger: ACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCA...TGGCTTGCAGGCGTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCCCCTGCGCTCACGCCTaGAAGCCACTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LRQGTCGKAHILAAAARGPCAHA*KPLSWN
Trigger: GTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGG...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGACTGCCTCTGCCACCTaGAGCCCCACCCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGCTQLRQGTCGKAHILATASAT*SPTPAL
Trigger: GAGGGCCGGGGTGGGGCTGCAGGTGGCAGAGGCAGT...CGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587962.6
CDS-3UTR CCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: WRQQHVAPGARPVRWILGQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: HGQAIHGWAGPVPSRCTLQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...CAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DPGMAKRFMAGQGQSRPAGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...AGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTCGCCTCGGGACCCTCTaGCTCACGCCGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LQENSQLVWDSAPRPFTARLGTL*LTPLGG
Trigger: CCCGCCCAGCGGCGTGAGTCAGAGGGTCCCGAGGCG...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTGCCATCTCGGCCGGCTaGCGGGACAGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPAISAG*RDRACS
Trigger: GCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGC...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CTCACGCCTGCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATGCCGAACTCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LTPASHSAGTWPPRICRTPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...AGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
CDS-3UTR GCA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SWLGRASPVPLHADHRALIKCSP*PHPPGF
Trigger: GAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTAT...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGTCTCGTTGTACCGCATaGCTCCGCGGGGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: LGAHQAPGCTQLRQGTCGSRCTA*LRGERE
Trigger: TTCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGA...CCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GCCACCAGCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGA +
Preference number: 4 (lower is better)
Translates to: ATSLGAHQAPGCTQLRQGHSAGT*PPRICR
Trigger: TCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTG...GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGCTGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCTGCAAGCCACTCAGCTaGAACCTGGCCTCCTCGGAT +
Preference number: 4 (lower is better)
Translates to: DSWLGRASPVPLHADHRACKPLS*NLASSD
Trigger: ATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCA...GGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCA +
Preference number: 4 (lower is better)
Translates to: HLWEGAYPGGSSTWHQVPGRRIS*RQQHVA
Trigger: TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCC...TGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGGGCTCACCAGGCCCCTaGATGCACACAACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LGAHQAPGCTQLRQGTCGGSPGP*MHTTQA
Trigger: TGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCC...CCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGGGCTCACCAGGCCCCTaGATGCACACAACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WRQQHVAPGARPVRWILGGSPGP*MHTTQA
Trigger: TGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCC...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGGGCTCACCAGGCCCCTaGATGCACACAACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PVGRRISWRQQHVAPGARGSPGP*MHTTQA
Trigger: TGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCC...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCGTCCCGCTGCACGCTaGCCACCGTGCCCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQRPAAR*PPCPAL
Trigger: GAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACG...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GCCACCAGCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCGCCTGGGCAACACAGTaGAACCCTGACCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: ATSLGAHQAPGCTQLRQGAWATQ*NPDPKT
Trigger: GGTTTTTGGGTCAGGGTTTCACTGTGTTGCCCAGGC...GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGCTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTTGCGCGATGGTGCTGTaGGGACGGCGCGGGCACGTT +
Preference number: 4 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPCAMVL*GRRGHV
Trigger: AACGTGCCCGCGCCGTCCTCACAGCACCATCGCGCA...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACTGCCGGGACAGAGCCTaGAGCTCCTTCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHCRDRA*SSFSLY
Trigger: GTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCA...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: DAHNSGRAPVGRRISWRQSWGPS*PARPPS
Trigger: AGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGA...CTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGGTTCCAGGGGGTCCTTaGCCGTCACCTTCCGGATTT +
Preference number: 4 (lower is better)
Translates to: WRQQHVAPGARPVRWILGVPGGP*PSPSGF
Trigger: AAATCCGGAAGGTGACGGGCAAGGACCCCCTGGAAC...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGTTCCAGGGGGTCCTTaGCCGTCACCTTCCGGATTT +
Preference number: 4 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWVPGGP*PSPSGF
Trigger: AAATCCGGAAGGTGACGGGCAAGGACCCCCTGGAAC...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGTGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HGQAIHGWAGPVPSRCTLWPPRI*RTVPGG
Trigger: ACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCA...CAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCTGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRQGTCGKAHILAAAARGWPPRI*RTVPGG
Trigger: ACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCA...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp ACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCCCCTGCGCTCACGCCTaGAAGCCACTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TDPGMAKRFMAGQGQSRPPCAHA*KPLSWN
Trigger: GTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGG...GGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp AAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: KTDPGMAKRFMAGQGQSRPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...ACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGCAGGGCCCTCCTGTCTaGAGGAGAATTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWQGPPV*RRIHSW
Trigger: CCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCCTG...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTCCATGGCTCGCAGCATaGCCTGCGATGCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPPWLAA*PAMRGR
Trigger: CCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGG...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTTGTGCTGCGCGATGGTaGTGTGAGGACGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPCAARW*CEDGAG
Trigger: GCCCGCGCCGTCCTCACAGCACCATCGCGCAGCACA...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGGCATGTGAAGGGGCCTaGGCGGTGACGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LYIKTRVCRAGPPADSPQACEGA*AVTQLA
Trigger: GGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGC...CTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTGCTCCCCCGACGCGCTaGTCCCGTACCAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPAPPTR*SRTKGR
Trigger: CCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGC...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp ATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCCCCCAGGCCCGCGCCTaGCTCCACCCGCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: MRALYKDTCLQGGPASGFPQARA*LHPLGA
Trigger: AGCACCAAGCGGGTGGAGGCAGGCGCGGGCCTGGGG...GAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGA +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHHSAGT*PPRICR
Trigger: TCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTG...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGA +
Preference number: 4 (lower is better)
Translates to: LRQGTCGKAHILAAAARGHSAGT*PPRICR
Trigger: TCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTG...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCTGCAAGCCACTCAGCTaGAACCTGGCCTCCTCGGAT +
Preference number: 4 (lower is better)
Translates to: LRQGTCGKAHILAAAARGCKPLS*NLASSD
Trigger: ATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCA...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGTGGCCAAGCGATTCATaGCTGGGCAGGGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AHNSGRAPVGRRISWRQQWPSDS*LGRASP
Trigger: GGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCA...CTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: HGQAIHGWAGPVPSRCTLVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRQGTCGKAHILAAAARGVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGGGATCGCGGCTGAAATaGTTTCGGCCGCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: WRQQHVAPGARPVRWILGGSRLK*FRPPSL
Trigger: CAAGGAAGGCGGCCGAAACCATTTCAGCCGCGATCC...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp TCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCTGCGCCTGCGCACCTTaGGCCAGCCATGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SCLQENSQLVWDSAPRPFCACAP*ASHAAR
Trigger: GCGGGCGGCATGGCTGGCCCAAGGTGCGCAGGCGCA...GAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR TCA 90 bp TGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCAGTTAGGTGGATCCTGGGGGCCTGGGCAACACAGTaGAACCCTGACCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: WRQQHVAPGARPVRWILGAWATQ*NPDPKT
Trigger: GGTTTTTGGGTCAGGGTTTCACTGTGTTGCCCAGGC...CCCCAGGATCCACCTAACTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: DPGMAKRFMAGQGQSRPARSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...AGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp AGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCTTGCGCCCTTGCATGTaGAGGGGCCTGCGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: RALYKDTCLQGGPASGFALRPCM*RGLRGD
Trigger: GTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAA...GGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR TCA 90 bp AGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCCCCTGGCGCCTGCCCTaGGCTCTTCACCTTTACCCC +
Preference number: 4 (lower is better)
Translates to: RALYKDTCLQGGPASGFAPWRLP*ALHLYP
Trigger: GGGGTAAAGGTGAAGAGCTCAGGGCAGGCGCCAGGG...GGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: QNRSRHGQAIHGWAGPVPSWGPS*PARPPS
Trigger: AGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGA...CGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCGCTTCAGCACGCTaGCCTTCTTGGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ALYKDTCLQGGPASGFATAASAR*PSWGPS
Trigger: TGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGC...TGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp TCACGCCTGCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATGCCGAACTGGCCGCTTCAGCACGCTaGCCTTCTTGGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SRLQATQLEPGLLGYAELAASAR*PSWGPS
Trigger: TGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGC...CAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591099.6
CDS-3UTR GCA 90 bp TCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRHGQAIHGWAGPVPSRCIKCSP*PHPPGF
Trigger: GAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTAT...GCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: APVGRRISWRQQHVAPGAIKCSP*PHPPGF
Trigger: GAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTAT...GGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PVGRRISWRQQHVAPGARIKCSP*PHPPGF
Trigger: GAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTAT...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp AGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCCTCCGGGGCGTGGGTTaGGCCCTTGCATGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RALYKDTCLQGGPASGFALRGVG*ALACEG
Trigger: CCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAG...GGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGCATTTGCCCCGGAAGTaGTTTCTTTGCCCGCCGTTC +
Preference number: 4 (lower is better)
Translates to: QGTCGKAHILAAAARGTRHLPRK*FLCPPF
Trigger: GAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATG...CCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTGGGCGGGCCAGGCATaGGCACACCAGAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LQENSQLVWDSAPRPFTAWAGQA*AHQRAR
Trigger: ACGGGCCCTCTGGTGTGCGCATGCCTGGCCCGCCCA...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp CTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGTCGTTGAGAGCGTTGTaGGCACGCGCAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGAHQAPGCTQLRQGTCGSLRAL*ARAVCL
Trigger: AAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGA...CCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp GGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGACCTTGGGCCAGCCATaGCGCCCGCCTCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GHSQLCLALYIHSARGRGTLGQP*RPPPLR
Trigger: ACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGT...CCCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SWLGRASPVPLHADHRALKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCACTGCCCACACCCACCTaGCTTCAGGCTTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: HLWEGAYPGGSSTWHQVPLPTPT*LQALDV
Trigger: GACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG...TGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCGCCATGCCACCAGCCTaGGGGCTCACCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NKTDPGMAKRFMAGQGQSAMPPA*GLTRPL
Trigger: CAGGGGCCTGGTGAGCCCCCAGGCTGGTGGCATGGC...GGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGCGACCCGTGGCTGCTaGCGTGGGCGGGGTACCGGT +
Preference number: 4 (lower is better)
Translates to: RPFTALSGSVHSFSTGQGATRGC*RGRGTG
Trigger: ACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGC...CCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp CAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGAGATAACGCGGCCTTaGGCTCTGGTGAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QAWPSDSWLGRASPVPLHEITRP*ALVRSR
Trigger: TCTACTCCTCACCAGAGCCCAAGGCCGCGTTATCTC...GTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp GCCACCAGCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACTGCTCCTCGCTGCTaGACTCAAAGTGATACTTCC +
Preference number: 4 (lower is better)
Translates to: ATSLGAHQAPGCTQLRQGTAPRC*TQSDTS
Trigger: GGAAGTATCACTTTGAGTGCAGCAGCGAGGAGCAGT...GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGCTGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR GCA 90 bp GATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCACTGCTCCTCGCTGCTaGACTCAAAGTGATACTTCC +
Preference number: 4 (lower is better)
Translates to: DSWLGRASPVPLHADHRATAPRC*TQSDTS
Trigger: GGAAGTATCACTTTGAGTGCAGCAGCGAGGAGCAGT...GGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR GCA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 4 (lower is better)
Translates to: LRQGTCGKAHILAAAARGGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGGAGCGCCCTGGCGCCTaGCCTGAGCTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LYIKTRVCRAGPPADSPQERPGA*PELFTF
Trigger: AAAGGTGAAGAGCTCAGGGCAGGCGCCAGGGCGCTC...CTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTGGATTCGCCACAGCCTaGCCCGGTGCTATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPGFATA*PGAISS
Trigger: GGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCC...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp GAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAATAAAGACACGTGTCTaGAGGGCGGGCCCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ELYIKTRVCRAGPPADSPIKTRV*RAGPPA
Trigger: CGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTAT...TGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp TCACGCCTGCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATGCCGAACTGTGGCCAAGCGATTCATaGCTGGGCAGGGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SRLQATQLEPGLLGYAELWPSDS*LGRASP
Trigger: GGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCA...CAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
CDS-3UTR CCA 90 bp GCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCTGCCCACACCCACCTaGCTTCAGGCTTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: AHNSGRAPVGRRISWRQQLPTPT*LQALDV
Trigger: GACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG...CTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCAGTTAGGTGGATCCTaGGGCCCCAGGGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: KTDPGMAKRFMAGQGQSRQLGGS*GPRERS
Trigger: GCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTG...ACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCA +
Preference number: 4 (lower is better)
Translates to: QNRSRHGQAIHGWAGPVPGRRIS*RQQHVA
Trigger: TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCC...CGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACACAACCAAGATTCGTTaGGGTCGAATCGGGATCGCG +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHTTKIR*GRIGIA
Trigger: CGCGATCCCGATTCGACCCCAACGAATCTTGGTTGT...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGACGAAGTCGTGGAGGTaGCGAAACGAGGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: PVGRRISWRQQHVAPGARTKSWR*RNEEEI
Trigger: TATCTCCTCCTCGTTTCGCCACCTCCACGACTTCGT...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp TCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCTCTGACTCACGCCGCTaGGCGGGCCAGGCATGCGCA +
Preference number: 4 (lower is better)
Translates to: SCLQENSQLVWDSAPRPFSDSRR*AGQACA
Trigger: TGCGCATGCCTGGCCCGCCCAGCGGCGTGAGTCAGA...GAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR TCA 90 bp TCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACTGCTGCACTCAAAGTaGTACTTCCTCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGRAPVGRRISWRQQHVALLHSK*YFLSGS
Trigger: GGACCCTGAGAGGAAGTATCACTTTGAGTGCAGCAG...TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR TCA 90 bp TGCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATGCCGAACTGTTCCAGGGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CKPLSWNLASSDMPNCSRGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...CCTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591099.6
CDS-3UTR TCA 90 bp GCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGCCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: AWGLTRPLDAHNSGRAPVPKTSH*KSRCDG
Trigger: GCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGG...CACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCCCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: APVGRRISWRQQHVAPGAPKTSH*KSRCDG
Trigger: GCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGG...GGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTTTACCCCGGCACTGTaGACCCCCAGACTGTTCACC +
Preference number: 4 (lower is better)
Translates to: LYKDTCLQGGPASGFATAFTPAL*TPRLFT
Trigger: GGTGAACAGTCTGGGGGTTCACAGTGCCGGGGTAAA...GGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR TCA 90 bp GAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAGTGCTGACTAGACGCTaGCAACGCCGAACCCCGTTC +
Preference number: 4 (lower is better)
Translates to: ELYIKTRVCRAGPPADSPVLTRR*QRRTPF
Trigger: GAACGGGGTTCGGCGTTGTCAGCGTCTAGTCAGCAC...TGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCGCCATCTCGGCCGGCTaGCGGGACAGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGAISAG*RDRACS
Trigger: GCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGC...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTCTTCCCGGACGACTCTaGAGCGCTCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQENSQLVWDSAPRPFTALPGRL*SAPAAG
Trigger: CCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAG...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGTGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PGCTQLRQGTCGKAHILAWPPRI*RTVPGG
Trigger: ACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCA...CGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp AAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCTGCGCTCACGCCTaGAAGCCACTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KTDPGMAKRFMAGQGQSRPCAHA*KPLSWN
Trigger: GTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGG...ACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCCCAGTCCCGTCCCGCTaGACGCTGACCACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGPVPSR*TLTTVP
Trigger: GGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGG...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCAGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 4 (lower is better)
Translates to: SGRAPVGRRISWRQQHVAGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCCCTGCACACACCTTaGCCGTCACCTTCCGGATTT +
Preference number: 4 (lower is better)
Translates to: PGCTQLRQGTCGKAHILAALHTP*PSPSGF
Trigger: AAATCCGGAAGGTGACGGGCAAGGTGTGTGCAGGGC...CGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587962.6
CDS-3UTR GCA 90 bp TATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGACAGCATGCCCTGCGATaGGGGGCAGGCCTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: YMRALYKDTCLQGGPASGQHALR*GAGLSW
Trigger: CCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTG...TCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp TATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGAGCTCGCAGCATGCCCTaGGATGCGGGGCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: YMRALYKDTCLQGGPASGARSMP*DAGQAC
Trigger: ACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGC...TCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCGTCCCCGCTCAGGCTaGGGCCGGCGCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQRPRSG*GRRQKC
Trigger: ACATTTTTGGCGCCGGCCCCAGCCTGAGCGGGGACG...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326631.7
ENST00000589097.6
CDS-3UTR CCA 90 bp CAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCGGCTCATGCCGTCCCCGCTCAGGCTaGGGCCGGCGCCAAAAATGT +
Preference number: 4 (lower is better)
Translates to: QKPPTENPGVMAGCGGSCRPRSG*GRRQKC
Trigger: ACATTTTTGGCGCCGGCCCCAGCCTGAGCGGGGACG...GCATGAGCCGCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000326631.7
ENST00000589097.6
CDS-3UTR CCA 90 bp GATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGA +
Preference number: 4 (lower is better)
Translates to: DAHNSGRAPVGRRISWRQHSAGT*PPRICR
Trigger: TCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTG...CTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTGCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATGCCGAACTGTTCCAGCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LQATQLEPGLLGYAELFQQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...CTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591099.6
CDS-3UTR CCA 90 bp CATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: HGQAIHGWAGPVPSRCTLKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...CAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCTGCCCACACCCACCTaGCTTCAGGCTTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: DAHNSGRAPVGRRISWRQLPTPT*LQALDV
Trigger: GACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG...CTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCAGTTAGGTGGATCCTaGGGCCCCAGGGAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQQLGGS*GPRERS
Trigger: GCTGCGCTCCCTGGGGCCCCAGGATCCACCTAACTG...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGGGCGGCAGCAGCACGTaGCACCAGGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HTHLASGFGCLQTKNLPLGGSST*HQVPGQ
Trigger: CTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCC...CAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AACCAAAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCGCCATGCCACCAGCCTaGGGGCTCACCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NQNKTDPGMAKRFMAGQGAMPPA*GLTRPL
Trigger: CAGGGGCCTGGTGAGCCCCCAGGCTGGTGGCATGGC...GCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTTCCAGGGGGTCCTGTaGGGAGGACGGGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LQENSQLVWDSAPRPFTAFQGVL*GGRVAM
Trigger: CATGGCCACCCGTCCTCCCCACAGGACCCCCTGGAA...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587962.6
CDS-3UTR CCA 90 bp GAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAGGGGCAGGCCTGTCGTaGGTCCCTTGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ELYIKTRVCRAGPPADSPGAGLS*VPWCFL
Trigger: CAAGAAACACCAAGGGACCCACGACAGGCCTGCCCC...TGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR TCA 90 bp GCCACCAGCCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCAGAGGTACCTTTATTTaGACAGAACAAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: ATSLGAHQAPGCTQLRQGRGTFI*TEQAPW
Trigger: CCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCT...GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGGCTGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCAAGGGGCCTGCGCGGTaGCGCAGCTGGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LYMRALYKDTCLQGGPASKGPAR*RSWPCA
Trigger: AGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTT...GCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp AGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RPFTALSGSVHSFSTGQGSWGPS*PARPPS
Trigger: AGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGA...CCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GCCCCTAGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGGCCGCTTCAGCACGCTaGCCTTCTTGGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: APRPFTALSGSVHSFSTGAASAR*PSWGPS
Trigger: TGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGC...CCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGACTTCCCGGACGACTCTaGAGCGCTCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YMRALYKDTCLQGGPASGLPGRL*SAPAAG
Trigger: CCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAG...TCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CAGGAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACCTTCCCGGACGACTCTaGAGCGCTCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QEDHLSPEGQGHSELWHHLPGRL*SAPAAG
Trigger: CCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAG...GTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CTGCCCACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCTTCCCGGACGACTCTaGAGCGCTCCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPTPTWLQALDVSKPKTSLPGRL*SAPAAG
Trigger: CCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGAAG...GGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAGACACTGCTCCTCGCTaGTGCACTCAAAGTGATACT +
Preference number: 4 (lower is better)
Translates to: WGLTRPLDAHNSGRAPVGDTAPR*CTQSDT
Trigger: AGTATCACTTTGAGTGCAGCAGCGAGGAGCAGTGTC...TCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR GCA 90 bp CCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGATAAAATGCAGCCCCTaGCCACACCCACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PGCTQLRQGTCGKAHILAIKCSP*PHPPGF
Trigger: GAAGCCAGGTGGGTGTGGGCAGGGGCTGCATTTTAT...CGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCCACCAGGCCCCTGGATaGACACAACTCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCLQENSQLVWDSAPRPFHQAPG*TQLRQG
Trigger: GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTG...GAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTCACCAGGCCCCTGGATaGACACAACTCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQENSQLVWDSAPRPFTAHQAPG*TQLRQG
Trigger: GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTG...AGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGCTGGAGGACTGCCTCTaGCACCTGCAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: HTHLASGFGCLQTKNLPLLEDCL*HLQPHP
Trigger: GGGGTGGGGCTGCAGGTGGCAGAGGCAGTCCTCCAG...CAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587962.6
CDS-3UTR GCA 90 bp CTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCCACAGCCTGCCCCGGTaGTATCTCGTCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LYMRALYKDTCLQGGPASHSLPR*YLVPRP
Trigger: GGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTG...GCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp CCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PVCRRIHSWCGTQPLGHSQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...TGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCA +
Preference number: 4 (lower is better)
Translates to: GHSQLCLALYIHSARGRGGRRIS*RQQHVA
Trigger: TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCC...CCCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGACCATGTGCTGCGCGATaGTGCTGTGAGGACGGCGCG +
Preference number: 4 (lower is better)
Translates to: YMRALYKDTCLQGGPASGPCAAR*CCEDGA
Trigger: CGCGCCGTCCTCACAGCACCATCGCGCAGCACATGG...TCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR TCA 90 bp CCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCCTGCTGCACTCAAAGTaGTACTTCCTCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PWMHTTQAGHLWEGAYPGLLHSK*YFLSGS
Trigger: GGACCCTGAGAGGAAGTATCACTTTGAGTGCAGCAG...GCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR TCA 90 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGGCCTGGGCAACACAGTaGAACCCTGACCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: QNRSRHGQAIHGWAGPVPAWATQ*NPDPKT
Trigger: GGTTTTTGGGTCAGGGTTTCACTGTGTTGCCCAGGC...CGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp AAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KQNRSRHGQAIHGWAGPVGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...GACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGAGAGGTACCTTTATTTaGACAGAACAAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWRGTFI*TEQAPW
Trigger: CCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCT...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp AAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCGGCCTTGGGCTCTGGTaGGGAGTAGAGGCGGTTGAG +
Preference number: 4 (lower is better)
Translates to: KQNRSRHGQAIHGWAGPVGLGLW*GVEAVE
Trigger: CTCAACCGCCTCTACTCCTCACCAGAGCCCAAGGCC...GACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp AAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTTGCCGGGACAGAGCCTaGAGCTCCTTCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: KTDPGMAKRFMAGQGQSRCRDRA*SSFSLY
Trigger: GTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCA...ACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: LYMRALYKDTCLQGGPASSWGPS*PARPPS
Trigger: AGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGA...GCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp GGGCCCTCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 4 (lower is better)
Translates to: GPSCLQENSQLVWDSAPRGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...CCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp AAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCACCAGGCCCCTGGATaGACACAACTCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KQNRSRHGQAIHGWAGPVHQAPG*TQLRQG
Trigger: GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTG...GACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGAGGGCCCGTCTCATTTaGCCCGGAAGTGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: DAHNSGRAPVGRRISWRQRARLI*PGSAFF
Trigger: AAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCT...CTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp ATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCTCTCGTTGTACCGCATaGCTCCGCGGGGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: MRALYKDTCLQGGPASGFSRCTA*LRGERE
Trigger: TTCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGA...GAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp GAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCTGGCCAAGCGATTCATaGCTGGGCAGGGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: EDHLSPEGQGHSELWHHCWPSDS*LGRASP
Trigger: GGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCA...GCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGCCTGGCTTCAGGCTTTaGATGTCTCCAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: LGAHQAPGCTQLRQGTCGPGFRL*MSPNQK
Trigger: TTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG...CCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACCCTGGCTTCAGGCTTTaGATGTCTCCAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: QAWPSDSWLGRASPVPLHPGFRL*MSPNQK
Trigger: TTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG...GTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGCCTGGCTTCAGGCTTTaGATGTCTCCAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: PVGRRISWRQQHVAPGARPGFRL*MSPNQK
Trigger: TTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CAGGAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACGGAAGGCGCATATCCTaGCGGCAGCAGCACGTGGCA +
Preference number: 4 (lower is better)
Translates to: QEDHLSPEGQGHSELWHHGRRIS*RQQHVA
Trigger: TGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCC...GTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTCCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp ATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCTTTCTCGGCTGTCCATaGCTCGCAGCATGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: MRALYKDTCLQGGPASGFFLGCP*LAACPA
Trigger: CGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAA...GAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp CTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCTCACCCTCCGGGGCGTaGGTTGCGCCCTTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LYMRALYKDTCLQGGPASSPSGA*VAPLHV
Trigger: CACATGCAAGGGCGCAACCCACGCCCCGGAGGGTGA...GCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp GCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGAGGGCTCCGACGGGCTaGAGGAGACACGGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: ASGFGCLQTKNLPLKIQVRAPTG*RRHGRR
Trigger: CCGGCGCCCGTGTCTCCTCCAGCCCGTCGGAGCCCT...CACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586608.3
CDS-3UTR TCA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTCTGCTGCACTCAAAGTaGTACTTCCTCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPLLHSK*YFLSGS
Trigger: GGACCCTGAGAGGAAGTATCACTTTGAGTGCAGCAG...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR TCA 90 bp CAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: QAGHLWEGAYPGGSSTWHNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...GTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CCTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: PGGSPGPWMHTTQAGHLWNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...CCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CTATATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCCCACCCGCTTGGTGCTaGCTAGACGCTGACAACGCC +
Preference number: 4 (lower is better)
Translates to: LYMRALYKDTCLQGGPASPPAWC*LDADNA
Trigger: GGCGTTGTCAGCGTCTAGTCAGCACCAAGCGGGTGG...GCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR TCA 90 bp GGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGAATCGGGATCGCGGCTaGAATGGTTTCGGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GHSQLCLALYIHSARGRGNRDRG*NGFGRL
Trigger: AAGGCGGCCGAAACCATTTCAGCCGCGATCCCGATT...CCCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp AACCAAAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCCCTGCGCTCACGCCTaGAAGCCACTCAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: NQNKTDPGMAKRFMAGQGPCAHA*KPLSWN
Trigger: GTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGG...GCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGCGAAAGTTGGCCCCGTaGGGCCGCAGCGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: ASGFGCLQTKNLPLKIQVRKLAP*GRSGPR
Trigger: CCTCGGTCCGCTGCGGCCGCACGGGGCCAACTTTCG...CACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCTGCGCACGCGCAGTTTaGCTTCCAGGCCGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGCARAV*LPGRAF
Trigger: GAAAGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCA...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGTGCAAGCCACTCAGCTaGAACCTGGCCTCCTCGGAT +
Preference number: 4 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQCKPLS*NLASSD
Trigger: ATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCA...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGACCTGGCTTCAGGCTTTaGATGTCTCCAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: WGLTRPLDAHNSGRAPVGPGFRL*MSPNQK
Trigger: TTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG...TCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGGGCGGCAGCAGCACGTaGCACCAGGTGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASGFGCLQTKNLPLKIQVGGSST*HQVPGQ
Trigger: CTGGCCTGGCACCTGGTGCCACGTGCTGCTGCCGCC...CACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCATTCACAGCTTTGTCTaGCTCTGTACATTCATTCAG +
Preference number: 4 (lower is better)
Translates to: DSWLGRASPVPLHADHRAIHSFV*LCTFIQ
Trigger: CTGAATGAATGTACAGAGCCAGACAAAGCTGTGAAT...GGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGCACCCCAGCGATGGCTaGCACCCCTTTCTAGAGCGG +
Preference number: 4 (lower is better)
Translates to: HTHLASGFGCLQTKNLPLHPSDG*HPFLER
Trigger: CCGCTCTAGAAAGGGGTGCCAGCCATCGCTGGGGTG...CAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp TCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCAAGGCACCCCAGCGATaGCTGGCACCCCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SCLQENSQLVWDSAPRPFKAPQR*LAPLSR
Trigger: TCTAGAAAGGGGTGCCAGCCATCGCTGGGGTGCCTT...GAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp TCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCCGCCAAACGAAGTCGTaGAGGTGGCGAAACGAGGAG +
Preference number: 4 (lower is better)
Translates to: SCLQENSQLVWDSAPRPFRQTKS*RWRNEE
Trigger: CTCCTCGTTTCGCCACCTCCACGACTTCGTTTGGCG...GAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR TCA 90 bp GGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGGCCTGGGCAACACAGTaGAACCCTGACCCAAAAACC +
Preference number: 4 (lower is better)
Translates to: GHSQLCLALYIHSARGRGAWATQ*NPDPKT
Trigger: GGTTTTTGGGTCAGGGTTTCACTGTGTTGCCCAGGC...CCCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTTGAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: QENSQLVWDSAPRPFTALRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...CAAAGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: EDHLSPEGQGHSELWHHCRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...GCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp TCACGCCTGCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATGCCGAACTGCCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: SRLQATQLEPGLLGYAELPKTSH*KSRCDG
Trigger: GCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGG...CAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591099.6
CDS-3UTR TCA 90 bp AGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACGGCGCGGGCACGTTaGACAAGTGCATTTACTTTT +
Preference number: 4 (lower is better)
Translates to: RALYKDTCLQGGPASGFATARAR*TSAFTF
Trigger: AAAAGTAAATGCACTTGTTCAACGTGCCCGCGCCGT...GGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR TCA 90 bp CAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTTGATGTCGAGGCTGCAGTaGGCCATGATCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: QENSQLVWDSAPRPFTALMSRLQ*AMIPPL
Trigger: CAGTGGTGGGATCATGGCTCACTGCAGCCTCGACAT...CAAAGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR GCA 90 bp TATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATGCCGGGACAGAGCCTaGAGCTCCTTCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: YMRALYKDTCLQGGPASGCRDRA*SSFSLY
Trigger: GTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCA...TCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CTGCCCACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCTGCCGGGACAGAGCCTaGAGCTCCTTCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LPTPTWLQALDVSKPKTSCRDRA*SSFSLY
Trigger: GTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCA...GGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp AGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACTGCTCCTCGCTGCTaGACTCAAAGTGATACTTCC +
Preference number: 4 (lower is better)
Translates to: RALYKDTCLQGGPASGFATAPRC*TQSDTS
Trigger: GGAAGTATCACTTTGAGTGCAGCAGCGAGGAGCAGT...GGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR GCA 90 bp CTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGGACACTGCTCCTCGCTaGTGCACTCAAAGTGATACT +
Preference number: 4 (lower is better)
Translates to: LYIKTRVCRAGPPADSPQDTAPR*CTQSDT
Trigger: AGTATCACTTTGAGTGCAGCAGCGAGGAGCAGTGTC...CTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCTCTCGTTGTACCGCATaGCTCCGCGGGGAACGGGAA +
Preference number: 4 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGSRCTA*LRGERE
Trigger: TTCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGA...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CAGGAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGA +
Preference number: 4 (lower is better)
Translates to: QEDHLSPEGQGHSELWHHHSAGT*PPRICR
Trigger: TCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTG...GTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGTGCAAGCCACTCAGCTaGAACCTGGCCTCCTCGGAT +
Preference number: 4 (lower is better)
Translates to: RPFTALSGSVHSFSTGQGCKPLS*NLASSD
Trigger: ATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCA...CCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGCAAGCGATTCATGGCTaGGCAGGGCCAGTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: WMSPNQKPPTENPGVMAGQAIHG*AGPVPS
Trigger: GGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTG...CCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCACTCTAGCCCTGCCCACACCCACCTaGCTTCAGGCTTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: LSPEGQGHSELWHHCTLALPTPT*LQALDV
Trigger: GACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG...GGCTAGAGTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TATATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGACTGTCGTGGGTCCCTTaGTGTTTCTTGCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: YMRALYKDTCLQGGPASGLSWVP*CFLPVT
Trigger: GGTGACGGGCAAGAAACACCAAGGGACCCACGACAG...TCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CCA 90 bp CCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCGTGGCTGCTGGCGTaGGCGGGGTACCGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PPGFRLWMSPNQKPPTENPWLLA*AGYRLV
Trigger: TACCAACCGGTACCCCGCCCACGCCAGCAGCCACGG...ATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589097.6
3UTR CAA 72 bp CTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGCTTaGTCTGGCTCTGTACATTCATTCAGCACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVWDSAPRPFTA*SGSVHSFSTGQ
Trigger: CTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGCTGAGTCCCACACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp AACCAAAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCAGGTCAAGGTCACAGTaGGCTGTGGCACCACTGCAC +
Preference number: 4 (lower is better)
Translates to: NQNKTDPGMAKRFMAGQGRSRSQ*AVAPLH
Trigger: GTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCT...GCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCTGCCGGGACAGAGCCTaGAGCTCCTTCTCGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGCRDRA*SSFSLY
Trigger: GTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCA...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PPGFRLWMSPNQKPPTENSWGPS*PARPPS
Trigger: AGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGA...ATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGGCCGCTTCAGCACGCTaGCCTTCTTGGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ASGFGCLQTKNLPLKIQVAASAR*PSWGPS
Trigger: TGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGC...CACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGGTTCCAGGGGGTCCTTaGCCGTCACCTTCCGGATTT +
Preference number: 4 (lower is better)
Translates to: HTHLASGFGCLQTKNLPLVPGGP*PSPSGF
Trigger: AAATCCGGAAGGTGACGGGCAAGGACCCCCTGGAAC...CAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCCAGGGCCCTCCTGTCTaGAGGAGAATTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGQGPPV*RRIHSW
Trigger: CCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCCTG...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: HTHLASGFGCLQTKNLPLVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: PGCTQLRQGTCGKAHILANTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...CGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGCGGCTCATGCCTGTaGTCCCCGCTACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPGGSCL*SPLLGK
Trigger: CTTCCCAAGTAGCGGGGATCACAGGCATGAGCCGCC...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGACTGCTCCTCGCTGCTaGACTCAAAGTGATACTTCC +
Preference number: 4 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQTAPRC*TQSDTS
Trigger: GGAAGTATCACTTTGAGTGCAGCAGCGAGGAGCAGT...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR GCA 90 bp CTGCCCACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 4 (lower is better)
Translates to: LPTPTWLQALDVSKPKTSGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...GGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCACACCAGGCCCCTGGATaGACACAACTCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPHQAPG*TQLRQG
Trigger: GCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTG...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATTGGCCAAGCGATTCATaGCTGGGCAGGGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PPGFRLWMSPNQKPPTENWPSDS*LGRASP
Trigger: GGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCA...ATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGGCCAAGCGATTCATaGCTGGGCAGGGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ASGFGCLQTKNLPLKIQVWPSDS*LGRASP
Trigger: GGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCA...CACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCGGCTCATGCAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: QKPPTENPGVMAGCGGSCKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...GCATGAGCCGCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp TGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGGTGATCCCCGCTACTTaGGAAGCTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WMSPNQKPPTENPGVMAGVIPAT*EAEAGG
Trigger: TCCTCCTGCCTCAGCTTCCCAAGTAGCGGGGATCAC...CCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCCTGCTGCACTCAAAGTaGTACTTCCTCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGLLHSK*YFLSGS
Trigger: GGACCCTGAGAGGAAGTATCACTTTGAGTGCAGCAG...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR GCA 90 bp TTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCACTCTAGCCGACACTGCTCCTCGCTaGTGCACTCAAAGTGATACT +
Preference number: 4 (lower is better)
Translates to: LSPEGQGHSELWHHCTLADTAPR*CTQSDT
Trigger: AGTATCACTTTGAGTGCAGCAGCGAGGAGCAGTGTC...GGCTAGAGTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
CDS-3UTR GCA 90 bp CACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGGGCAGTTTCATAAAATaGAGCCCCTGCCCACACCCA +
Preference number: 4 (lower is better)
Translates to: HTHLASGFGCLQTKNLPLGSFIK*SPCPHP
Trigger: TGGGTGTGGGCAGGGGCTGCATTTTATGAAACTGCC...CAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCTGGCTTCAGGCTTTaGATGTCTCCAAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: KTDPGMAKRFMAGQGQSRPGFRL*MSPNQK
Trigger: TTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG...ACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGATTCACAGCTTTGTCTaGCTCTGTACATTCATTCAG +
Preference number: 4 (lower is better)
Translates to: DAHNSGRAPVGRRISWRQIHSFV*LCTFIQ
Trigger: CTGAATGAATGTACAGAGCCAGACAAAGCTGTGAAT...CTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp AACCAAAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: NQNKTDPGMAKRFMAGQGPKTSH*KSRCDG
Trigger: GCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGG...GCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTTTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCACAGGGCCCTCCTGTCTaGAGGAGAATTCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPQGPPV*RRIHSW
Trigger: CCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCCTG...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp GAAAAGAGGTACCTTTATTTGAACAGAACAAGCACCCTGGCCCCAGGGCAACCACGGAAGTGCTTTCTTTaGCCGCCGTTCGCCAAACGA +
Preference number: 4 (lower is better)
Translates to: EKRYLYLNRTSTLAPGQPRKCFL*PPFAKR
Trigger: TCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCG...TGGTTGCCCTGGGGCCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CCA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCATGCAAGCCACTCAGCTaGAACCTGGCCTCCTCGGAT +
Preference number: 4 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPCKPLS*NLASSD
Trigger: ATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCA...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp AACCAAAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: NQNKTDPGMAKRFMAGQGKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...GCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCACTGCCCACACCCACCTaGCTTCAGGCTTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPLPTPT*LQALDV
Trigger: GACATCCAAAGCCTGAAGCCAGGTGGGTGTGGGCAG...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp AAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCAGAGGTACCTTTATTTaGACAGAACAAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: KQNRSRHGQAIHGWAGPVRGTFI*TEQAPW
Trigger: CCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCT...GACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp AAACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCAACACAGTGAAACCCTaGCCCAAAAACCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: KQNRSRHGQAIHGWAGPVNTVKP*PKNQKP
Trigger: TGGTTTTTGGTTTTTGGGTCAGGGTTTCACTGTGTT...GACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGGATTCACAGCTTTGTCTaGCTCTGTACATTCATTCAG +
Preference number: 4 (lower is better)
Translates to: GHSQLCLALYIHSARGRGIHSFV*LCTFIQ
Trigger: CTGAATGAATGTACAGAGCCAGACAAAGCTGTGAAT...CCCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR TCA 90 bp GCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGCCAAAAACCTCCCACTaGAAATCCAGGTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: ASGFGCLQTKNLPLKIQVPKTSH*KSRCDG
Trigger: GCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGG...CACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAAAACAGATCCAGGCATaGCCAAGCGATTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPKQIQA*PSDSWL
Trigger: CAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTT...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CCA 90 bp GAGGATCACTTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCATTCACAGCTTTGTCTaGCTCTGTACATTCATTCAG +
Preference number: 4 (lower is better)
Translates to: EDHLSPEGQGHSELWHHCIHSFV*LCTFIQ
Trigger: CTGAATGAATGTACAGAGCCAGACAAAGCTGTGAAT...GCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAAGTGATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR GCA 90 bp CCACACCCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAGAACGCTTCTGTATaGTCATCTATACCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: PHPPGFRLWMSPNQKPPTENASV*SSIPVS
Trigger: ACTAACAGGTATAGATGAGCATACAGAAGCGTTCTC...AGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGGGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp GCGCCTGCGCACCTTGGGCCAGCCATGCCGCCCGCCTCCGCTGCGTaGCGCTGGCGACCCGTGGCTGCTGGCGTGGGCGGGGTACCGGTT +
Preference number: 5 (lower is better)
Translates to: APAHLGPAMPPASAA*RWRPVAAGVGGVPV
Trigger: AACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGTGCGCAGGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 90 bp AGCCGCCGCTTCAGCACTTGGGCCAGCCATGCCGCCCGCCTCCGCTaGGTGGCGCTGGCGACCCGTGGCTGCTGGCGTGGGCGGGGTACC +
Preference number: 5 (lower is better)
Translates to: SRRFSTWASHAARLR*VALATRGCWRGRGT
Trigger: GGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGTGCTGAAGCGGCGGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589791.5
CDS CCA 90 bp GCGCACCTTGGGCCAGCCATGCCGCCCGCCTCCGCTGCGTGGCGCTaGCGACCCGTGGCTGCTGGCGTGGGCGGGGTACCGGTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: AHLGPAMPPASAAWR*RPVAAGVGGVPVGR
Trigger: CCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGTGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 90 bp GAAGCACCCCCAGGGCTAGTGCGCCTGCGCACCTTGGGCCAGCCATaGCGCCCGCCTCCGCTGCGTGGCGCTGGCGACCCGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EAPPGLVRLRTLGQP*RPPPLRGAGDPWLL
Trigger: CAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGTGCGCAGGCGCACTAGCCCTGGGGGTGCTTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp CCGGCTGCCGGGACAGAGCCTGCAGCTCCTTCTCGTTGTACCGCATaGCTCCGCGGGGAACGGGAACCCGGGCCGCGCCCTCCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: PAAGTEPAAPSRCTA*LRGEREPGPRPPGR
Trigger: GCGGCCGGGAGGGCGCGGCCCGGGTTCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCAGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000588356.1
ENST00000589097.6
ENST00000591099.6
CDS CCA 90 bp GGCCAGCCATGCCGCCCGCCTCCGCTGCGTGGCGCTGGCGACCCGTaGCTGCTGGCGTGGGCGGGGTACCGGTTGGTAGGAGAGACGGAC +
Preference number: 5 (lower is better)
Translates to: GQPCRPPPLRGAGDP*LLAWAGYRLVGETD
Trigger: GTCCGTCTCTCCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS CCA 90 bp GCCGCTTCAGCACTTGGGCCAGCCATGCCGCCCGCCTCCGCTGCGTaGCGCTGGCGACCCGTGGCTGCTGGCGTGGGCGGGGTACCGGTT +
Preference number: 5 (lower is better)
Translates to: AASALGPAMPPASAA*RWRPVAAGVGGVPV
Trigger: AACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGTGCTGAAGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589791.5
CDS GCA 90 bp GGTCTCCCGGGTCCCGCTCACCGCTGCCCTTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCTCGGCCGGCTGCCGGGACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: GLPGPAHRCPSWGPS*PARPPSRPAAGTEP
Trigger: AGGCTCTGTCCCGGCAGCCGGCCGAGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGAAGGGCAGCGGTGAGCGGGACCCGGGAGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586497.1
CDS CCA 90 bp TCAGCACTTGGGCCAGCCATGCCGCCCGCCTCCGCTGCGTGGCGCTaGCGACCCGTGGCTGCTGGCGTGGGCGGGGTACCGGTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: SALGPAMPPASAAWR*RPVAAGVGGVPVGR
Trigger: CCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGTGCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589791.5
CDS CCA 90 bp TCCCGGACGACTCTGCAGCGCTCCAGCAGCAGGGCTCCGACGGGCTaGAGGAGACACGGGCGCCGGGACGGGGCAGTGAGCACCCGGCCT +
Preference number: 5 (lower is better)
Translates to: SRTTLQRSSSRAPTG*RRHGRRDGAVSTRP
Trigger: AGGCCGGGTGCTCACTGCCCCGTCCCGGCGCCCGTGTCTCCTCCAGCCCGTCGGAGCCCTGCTGCTGGAGCGCTGCAGAGTCGTCCGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586608.3
ENST00000588450.1
CDS GCA 90 bp TCACCAGCCGCCGCTTCAGCACGCTGCCCTTCTTGGGGCCCCTCATaGCCAGCTCGGCCGCCATCTCGGCCGGCTGCCGGGACAGAGCCT +
Preference number: 5 (lower is better)
Translates to: SPAAASARCPSWGPS*PARPPSRPAAGTEP
Trigger: AGGCTCTGTCCCGGCAGCCGGCCGAGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGAAGGGCAGCGTGCTGAAGCGGCGGCTGGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587394.6
ENST00000587962.6
ENST00000588356.1
ENST00000588450.1
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp CCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGGTGCGCCTGCGCACCTaGGGCCAGCCATGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: PVGRRISWRQQHVAPGARVRLRT*GQPCRP
Trigger: CGGGCGGCATGGCTGGCCCAAGGTGCGCAGGCGCAC...CCTGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS TCA 90 bp CAGCCTCTCCCCCTCCAGCCTTTTCCTTCGCGCCTCGGGACCCTCTaGCTCACGCCGCTGGGCGGGCCAGGCATGCGCACACCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: QPLPLQPFPSRLGTL*LTPLGGPGMRTPEG
Trigger: GCCCTCTGGTGTGCGCATGCCTGGCCCGCCCAGCGGCGTGAGTCAGAGGGTCCCGAGGCGCGAAGGAAAAGGCTGGAGGGGGAGAGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS TCA 90 bp TCCGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTaGCGCAGCTGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGGC +
Preference number: 5 (lower is better)
Translates to: SGAWVAPLHVKGPAR*RSWPCAARWCCEDG
Trigger: GCCGTCCTCACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS TCA 90 bp CCCCGGGCTGCGGGAAGCGCCGCTGGCTTCCCTAGCCCCACTCACTaGTGGAGAAGGTGCCGGGCTCTTCCCGGACGACTCTGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: PRAAGSAAGFPSPTH*WRRCRALPGRLCSA
Trigger: AGCGCTGCAGAGTCGTCCGGGAAGAGCCCGGCACCTTCTCCATCAGTGAGTGGGGCTAGGGAAGCCAGCGGCGCTTCCCGCAGCCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588356.1
ENST00000588450.1
CDS GCA 90 bp ATGCCCAGCTCGGCCGCCATCTCGGCCGGCTGCCGGGACAGAGCCTaGAGCTCCTTCTCGTTGTACCGCATGGCTCCGCGGGGAACGGGA +
Preference number: 5 (lower is better)
Translates to: MPSSAAISAGCRDRA*SSFSLYRMAPRGTG
Trigger: TCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGCGGCCGAGCTGGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587394.6
ENST00000587962.6
ENST00000588356.1
ENST00000589097.6
ENST00000591099.6
CDS GCA 90 bp CGCGCCTCGGGACCCTCTGACTCACGCCGCTGGGCGGGCCAGGCATaGGCACACCAGAGGGCCCGTCTCATTTGCCCCGGAAGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: RASGPSDSRRWAGQA*AHQRARLICPGSAF
Trigger: GAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGGCCCGCCCAGCGGCGTGAGTCAGAGGGTCCCGAGGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 90 bp GGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGTTGAGAGCGTTGTaGGCACGCGCAGTTTGCCTTCCAGGCCGCGCTTTCAGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GPVRPQRTEGSLRAL*ARAVCLPGRAFSLS
Trigger: GGAGAGGCTGAAAGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp CGCCCGCCTCCGCTGCGTGGCGCTGGCGACCCGTGGCTGCTGGCGTaGGCGGGGTACCGGTTGGTAGGAGAGACGGACCGTTGTTACATA +
Preference number: 5 (lower is better)
Translates to: RPPPLRGAGDPWLLA*AGYRLVGETDRCYI
Trigger: TATGTAACAACGGTCCGTCTCTCCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS-3UTR CAA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGTGCAGCTCCTTCTCGTaGTACCGCATGGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: SWLGRASPVPLHADHRALCSSFS*YRMAPR
Trigger: CCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCA...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS TCA 90 bp TCGCGAAAGTTGGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGTTaGGAGCGTTGTGCGCACGCGCAGTTTGCCTTCCAGGCCGCGCTT +
Preference number: 5 (lower is better)
Translates to: SRKLAPCGRSGPRVR*ERCAHAQFAFQAAL
Trigger: AAGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCCAACTTTCGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp TCCAGCCTTTTCCTTCGCGCCTCGGGACCCTCTGACTCACGCCGCTaGGCGGGCCAGGCATGCGCACACCAGAGGGCCCGTCTCATTTGC +
Preference number: 5 (lower is better)
Translates to: SSLFLRASGPSDSRR*AGQACAHQRARLIC
Trigger: GCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGGCCCGCCCAGCGGCGTGAGTCAGAGGGTCCCGAGGCGCGAAGGAAAAGGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp GCGATAACGTCGCCCGGAGAGTGTCAGCCGCTCCCTCGCGAAAGTTaGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGTTGAGAGCGTT +
Preference number: 5 (lower is better)
Translates to: AITSPGECQPLPRES*PRAAAADRGFVESV
Trigger: AACGCTCTCAACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCCAACTTTCGCGAGGGAGCGGCTGACACTCTCCGGGCGACGTTATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGTGTTCCAGGGGGTCCTaGCCCGTCACCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: SWLGRASPVPLHADHRALCSRGS*PVTFRI
Trigger: AATCCGGAAGGTGACGGGCAAGGACCCCCTGGAACA...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000589097.6
ENST00000591099.6
CDS CCA 90 bp CCACCGTGCCCTGCGCTCACGCCTGCAAGCCACTCAGCTGGAACCTaGCCTCCTCGGATATGCCGAACTGTTCCAGGGGGTCCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: PPCPALTPASHSAGT*PPRICRTVPGGPVG
Trigger: CCCCACAGGACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAGCGCAGGGCACGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587962.6
ENST00000588450.1
ENST00000588545.2
CDS-3UTR CAA 90 bp AGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGTGCAGCTCCTTCTCGTaGTACCGCATGGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: RHGQAIHGWAGPVPSRCTCSSFS*YRMAPR
Trigger: CCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCA...CGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp TGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGCGCTCACCCCAGGGAGCGCAGCTaGCTGGGCAGTTTCATAAAA +
Preference number: 5 (lower is better)
Translates to: WAGPVPSRCTLTTVPCAHPRERS*LGSFIK
Trigger: TTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG...GTGAGCGCAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587962.6
ENST00000591099.6
CDS GCA 90 bp CGCTGGGCGGGCCAGGCATGCGCACACCAGAGGGCCCGTCTCATTTaGCCCGGAAGTGCTTTCTTTGCCCGCCGTTCGCCAAACGAAGTC +
Preference number: 5 (lower is better)
Translates to: RWAGQACAHQRARLI*PGSAFFARRSPNEV
Trigger: GACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGGCCCGCCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp CCCGTGGACAATGCACTCTTGTGTTTGAGGAGGGTGGCGCCAGGCTaGGGACACAGAGGAGACCTTGGGCGCCCGGGGAGGGGAAAGTGC +
Preference number: 5 (lower is better)
Translates to: PVDNALLCLRRVAPG*GHRGDLGRPGRGKC
Trigger: GCACTTTCCCCTCCCCGGGCGCCCAAGGTCTCCTCTGTGTCCCCAGCCTGGCGCCACCCTCCTCAAACACAAGAGTGCATTGTCCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588356.1
ENST00000588450.1
CDS-3UTR CAA 90 bp CTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCGCGTGGGTTGCGCCCTaGCATGTGAAGGGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: LYKDTCLQGGPASGFATAAWVAP*HVKGPA
Trigger: CGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGC...GGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CAA 90 bp AGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGAAGCGGGAAGATCGCTaGAGTCCAGGAGGTCGAGGC +
Preference number: 5 (lower is better)
Translates to: RHGQAIHGWAGPVPSRCTKREDR*SPGGRG
Trigger: GCCTCGACCTCCTGGACTCAAGCGATCTTCCCGCTT...CGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 90 bp CAGCGGACCGAGGGTTCGTTGAGAGCGTTGTGCGCACGCGCAGTTTaGCTTCCAGGCCGCGCTTTCAGCCTCTCCCCCTCCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QRTEGSLRALCARAV*LPGRAFSLSPSSLF
Trigger: GAAAAGGCTGGAGGGGGAGAGGCTGAAAGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp AACAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCGCTCCCTCGCGAAAGTaGGCCCCGTGCGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: NKTDPGMAKRFMAGQGQSAPSRK*APCGRS
Trigger: GCTGCGGCCGCACGGGGCCAACTTTCGCGAGGGAGC...GGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp CACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCAGGTTCGTTGAGAGCGTaGTGCGCACGCGCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: HLWEGAYPGGSSTWHQVPGSLRA*CARAVC
Trigger: GCAAACTGCGCGTGCGCACAACGCTCTCAACGAACC...TGGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp CCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGCGGACCGAGGGTTCGTaGAGAGCGTTGTGCGCACGC +
Preference number: 5 (lower is better)
Translates to: PGCTQLRQGTCGKAHILARTEGS*RALCAR
Trigger: GCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCG...CGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 90 bp CCAGGCATGCGCACACCAGAGGGCCCGTCTCATTTGCCCCGGAAGTaGTTTCTTTGCCCGCCGTTCGCCAAACGAAGTCGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: PGMRTPEGPSHLPRK*FLCPPFAKRSRGGG
Trigger: GCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp AAACCGGACCAAGGTGGAACAGAATCAAGGCACCCCAGCGATGGCTaGCACCCCTTTCTAGAGCGGCCAGGCGCAGGCGGAGGGAGCGAT +
Preference number: 5 (lower is better)
Translates to: KPDQGGTESRHPSDG*HPFLERPGAGGGSD
Trigger: ATCGCTCCCTCCGCCTGCGCCTGGCCGCTCTAGAAAGGGGTGCCAGCCATCGCTGGGGTGCCTTGATTCTGTTCCACCTTGGTCCGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS-3UTR CAA 90 bp GCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCACCAGGTGCCCCCAGGGAGCGCAGCTaGCTGGGCAGTTTCATAAAA +
Preference number: 5 (lower is better)
Translates to: APVGRRISWRQQHVAPGAPRERS*LGSFIK
Trigger: TTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG...GGCACCTGGTGCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp GCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGAGCCCTGCACACACCTaGCCCGTCACCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: AHNSGRAPVGRRISWRQQSPAHT*PVTFRI
Trigger: AATCCGGAAGGTGACGGGCAAGGTGTGTGCAGGGCT...CTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587962.6
CDS-3UTR CAA 90 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGGTGCGCACGCGCAGTTaGCCTTCCAGGCCGCGCTTT +
Preference number: 5 (lower is better)
Translates to: QNRSRHGQAIHGWAGPVPVRTRS*PSRPRF
Trigger: AAAGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCAC...CGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 90 bp CGCACACCAGAGGGCCCGTCTCATTTGCCCCGGAAGTGCTTTCTTTaGCCGCCGTTCGCCAAACGAAGTCGTGGAGGTGGCGAAACGAGG +
Preference number: 5 (lower is better)
Translates to: RTPEGPSHLPRKCFL*PPFAKRSRGGGETR
Trigger: CCTCGTTTCGCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 90 bp GCCCCGGAAGTGCTTTCTTTGCCCGCCGTTCGCCAAACGAAGTCGTaGAGGTGGCGAAACGAGGAGGAGATAACGCGGCCTTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: APEVLSLPAVRQTKS*RWRNEEEITRPWAL
Trigger: CAGAGCCCAAGGCCGCGTTATCTCCTCCTCGTTTCGCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp CTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGTGCAGCTCCTTCTCGTaGTACCGCATGGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: LYIKTRVCRAGPPADSPQCSSFS*YRMAPR
Trigger: CCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCA...CTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CAA 90 bp GGGCCCTCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGTGTTCCAGGGGGTCCTaGCCCGTCACCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: GPSCLQENSQLVWDSAPRCSRGS*PVTFRI
Trigger: AATCCGGAAGGTGACGGGCAAGGACCCCCTGGAACA...CCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326631.7
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp CTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGCACGTGGCAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: LRQGTCGKAHILAAAARGRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...GCCACGTGCTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp TCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCACCGTGCCCTGAGGCCATTCACAGCTTaGTCTGGCTCTGTACATTCA +
Preference number: 5 (lower is better)
Translates to: SWLGRASPVPLHADHRALRPFTA*SGSVHS
Trigger: TGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT...CAGGGCACGGTGGTCAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp ACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGAGGGCCCGTCTCATTaGCCCCGGAAGTGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: TDPGMAKRFMAGQGQSRPEGPSH*PRKCFL
Trigger: AAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTC...GGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 90 bp CTCACGCCTGCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGTCCTTGCCCGTCACCTTCCGGATTT +
Preference number: 5 (lower is better)
Translates to: LTPASHSAGTWPPRI*RTVPGGPCPSPSGF
Trigger: AAATCCGGAAGGTGACGGGCAAGGACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGCAGGCGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000589097.6
ENST00000589791.5
ENST00000591099.6
CDS GCA 90 bp CTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATaGGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: LLYFSAVHGSQHALR*GAGLSWVPWCFLPV
Trigger: GACGGGCAAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS CCA 90 bp TCTGGGAGGGACCCAAGCTTAAGTGGACTCGGCAGGTGGGAAGGGTaGTGCCCGCCAGGAGAACTTGACCTTGAGCTGCCCGTGGACAAT +
Preference number: 5 (lower is better)
Translates to: SGRDPSLSGLGRWEG*CPPGELDLELPVDN
Trigger: ATTGTCCACGGGCAGCTCAAGGTCAAGTTCTCCTGGCGGGCACCACCCTTCCCACCTGCCGAGTCCACTTAAGCTTGGGTCCCTCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588356.1
ENST00000588450.1
CDS CCA 90 bp TCCACAAGCCAAGGAACCTGGAGGATACTGGCCACCACTAGGAACTaGGAGATTCCCCTCGGCCTCAGAAGGATTCGGCCCCACCCACAC +
Preference number: 5 (lower is better)
Translates to: STSQGTWRILATTRN*EIPLGLRRIRPHPH
Trigger: GTGTGGGTGGGGCCGAATCCTTCTGAGGCCGAGGGGAATCTCCCAGTTCCTAGTGGTGGCCAGTATCCTCCAGGTTCCTTGGCTTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS CCA 90 bp GAAGTGCTTTCTTTGCCCGCCGTTCGCCAAACGAAGTCGTGGAGGTaGCGAAACGAGGAGGAGATAACGCGGCCTTGGGCTCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: EVLSLPAVRQTKSWR*RNEEEITRPWALVR
Trigger: CCTCACCAGAGCCCAAGGCCGCGTTATCTCCTCCTCGTTTCGCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp CATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACGCTGACCTGGCTTCAGGCTTaGGATGTCTCCAAACCAAAA +
Preference number: 5 (lower is better)
Translates to: HGQAIHGWAGPVPSRCTLTWLQA*DVSKPK
Trigger: TTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGT...CAGCGTGCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp TCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCCGCTGCACCTGGCTTCAGGCTTaGGATGTCTCCAAACCAAAA +
Preference number: 5 (lower is better)
Translates to: SRHGQAIHGWAGPVPSRCTWLQA*DVSKPK
Trigger: TTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGT...GCAGCGGGACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp CCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCCCCAGGGAGCGCAGCTaGCTGGGCAGTTTCATAAAA +
Preference number: 5 (lower is better)
Translates to: PWMHTTQAGHLWEGAYPGPRERS*LGSFIK
Trigger: TTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG...GCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp AGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGTGGGCGGGGTACCGGTaGGTAGGAGAGACGGACCGT +
Preference number: 5 (lower is better)
Translates to: RPFTALSGSVHSFSTGQGWAGYR*VGETDR
Trigger: ACGGTCCGTCTCTCCTACCAACCGGTACCCCGCCCA...CCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp GGGCCCTCCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGGTTGTGATTGTGCCGTaGCACTCCAGCCTGGACAAC +
Preference number: 5 (lower is better)
Translates to: GPSCLQENSQLVWDSAPRVVIVP*HSSLDN
Trigger: GTTGTCCAGGCTGGAGTGCAACGGCACAATCACAAC...CCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGGAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp AAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGTCCGGAAGTGCTTTCTTaGCCCGCCGTTCGCCAAACG +
Preference number: 5 (lower is better)
Translates to: KTDPGMAKRFMAGQGQSRPEVLS*PAVRQT
Trigger: CGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGG...ACGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp TGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGGCCATTCACAGCTTaGTCTGGCTCTGTACATTCA +
Preference number: 5 (lower is better)
Translates to: WGLTRPLDAHNSGRAPVGRPFTA*SGSVHS
Trigger: TGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT...TCCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp GAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCAGTCCCTTGGTGTTTCTaGCCCGTCACCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: ELYIKTRVCRAGPPADSPVPWCF*PVTFRI
Trigger: AATCCGGAAGGTGACGGGCAAGAAACACCAAGGGAC...TGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CAA 90 bp ATGAGAGCTCTATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCCCTGTCGTGGGTCCCTaGGTGTTTCTTGCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: MRALYKDTCLQGGPASGFPVVGP*VFLARH
Trigger: GTGACGGGCAAGAAACACCAAGGGACCCACGACAGG...GAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATAGAGCTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS TCA 90 bp CCTCGCTGCTGCACTCAAAGTGATACTTCCTCTCAGGGTCCTCAATaGAGCCTGGGGATGGAACACCTGTGGTCGGTCCTACCCACAGCC +
Preference number: 5 (lower is better)
Translates to: PRCCTQSDTSSQGPQ*SLGMEHLWSVLPTA
Trigger: GGCTGTGGGTAGGACCGACCACAGGTGTTCCATCCCCAGGCTTCATTGAGGACCCTGAGAGGAAGTATCACTTTGAGTGCAGCAGCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588450.1
ENST00000588545.2
CDS-3UTR CAA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCTGCAGCTCCTTCTCGTaGTACCGCATGGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGCSSFS*YRMAPR
Trigger: CCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCA...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp CAAAACAGATCCAGGCATGGCCAAGCGATTCATGGCTGGGCAGGGCCAGTCCCGAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: QNRSRHGQAIHGWAGPVPRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...CGGGACTGGCCCTGCCCAGCCATGAATCGCTTGGCCATGCCTGGATCTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp GCACACAACTCAGGCAGGGCACCTGTGGGAAGGCGCATATCCTGGCGGCAGCAGAGGCCATTCACAGCTTaGTCTGGCTCTGTACATTCA +
Preference number: 5 (lower is better)
Translates to: AHNSGRAPVGRRISWRQQRPFTA*SGSVHS
Trigger: TGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT...CTGCTGCCGCCAGGATATGCGCCTTCCCACAGGTGCCCTGCCTGAGTTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp CTGGGGGCTCACCAGGCCCCTGGATGCACACAACTCAGGCAGGGCACCTGTGGGAAGAGGTACCTTTATTaGAACAGAACAAGCACCCTG +
Preference number: 5 (lower is better)
Translates to: LGAHQAPGCTQLRQGTCGKRYLY*NRTSTL
Trigger: CAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTT...CCCACAGGTGCCCTGCCTGAGTTGTGTGCATCCAGGGGCCTGGTGAGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp TATATAAAGACACGTGTCTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTGACGGCGCGGGCACGTaGAACAAGTGCATTTACTTT +
Preference number: 5 (lower is better)
Translates to: YIKTRVCRAGPPADSPQPDGAGT*NKCIYF
Trigger: AAAGTAAATGCACTTGTTCAACGTGCCCGCGCCGTC...AGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAGACACGTGTCTTTATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS TCA 90 bp GGCCATGTGCTGCGCGATGGTGCTGTGAGGACGGCGCGGGCACGTTaGACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: GHVLRDGAVRTARAR*TSAFTFVFLGCPWL
Trigger: GAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTGCCCGCGCCGTCCTCACAGCACCATCGCGCAGCACATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS GCA 90 bp ATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTaGGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: IYFCISRLSMARSMP*DAGQACRGSLGVSC
Trigger: GCAAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS GCA 90 bp AGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATaGCCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: SAFTFVFLGCPWLAA*PAMRGRPVVGPLVF
Trigger: AAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS-3UTR CAA 90 bp TGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGCAGCTCCTTCTCGTaGTACCGCATGGCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: WMSPNQKPPTENPGVMAGCSSFS*YRMAPR
Trigger: CCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCA...CCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCTGTTCCAGGGGGTCCTaGCCCGTCACCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGCSRGS*PVTFRI
Trigger: AATCCGGAAGGTGACGGGCAAGGACCCCCTGGAACA...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000589097.6
ENST00000591099.6
CDS CCA 90 bp CTCAAAGTGATACTTCCTCTCAGGGTCCTCAATGAAGCCTGGGGATaGAACACCTGTGGTCGGTCCTACCCACAGCCACAAGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LKVILPLRVLNEAWG*NTCGRSYPQPQAAS
Trigger: GGAAGCTGCTTGTGGCTGTGGGTAGGACCGACCACAGGTGTTCCATCCCCAGGCTTCATTGAGGACCCTGAGAGGAAGTATCACTTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588450.1
ENST00000588545.2
CDS-3UTR CAA 90 bp GTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCACAGAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: VCRRIHSWCGTQPLGHSQRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...CTGTGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS TCA 90 bp ATTCTGCTTGGCGTCTGTGTAGAAGGGGAAATGTGGGCACAGACGTaGTGCAAGGAGGACAAGGTGACGCTTCCACAAGCCAAGGAACCT +
Preference number: 5 (lower is better)
Translates to: ILLGVCVEGEMWAQT*CKEDKVTLPQAKEP
Trigger: AGGTTCCTTGGCTTGTGGAAGCGTCACCTTGTCCTCCTTGCATCACGTCTGTGCCCACATTTCCCCTTCTACACAGACGCCAAGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS-3UTR CAA 90 bp CCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATTGTTCCAGGGGGTCCTaGCCCGTCACCTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: PPGFRLWMSPNQKPPTENCSRGS*PVTFRI
Trigger: AATCCGGAAGGTGACGGGCAAGGACCCCCTGGAACA...ATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp TCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTGTGATGGCCGGGTGTGGCAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: SPNQKPPTENPGVMAGCGRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...GCCACACCCGGCCATCACACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS TCA 90 bp AAAAGAAACAACCAAGATTCGTTGGGGTCGAATCGGGATCGCGGCTaGAATGGTTTCGGCCGCCTTCCTTGTAGCCGAGAACGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: KRNNQDSLGSNRDRG*NGFGRLPCSRERFC
Trigger: ACAGAAGCGTTCTCGGCTACAAGGAAGGCGGCCGAAACCATTTCAGCCGCGATCCCGATTCGACCCCAACGAATCTTGGTTGTTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp GCCCCTAGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGACCTGGCTTCAGGCTTaGGATGTCTCCAAACCAAAA +
Preference number: 5 (lower is better)
Translates to: APRPFTALSGSVHSFSTGTWLQA*DVSKPK
Trigger: TTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGT...CCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp GCCCCTAGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGAGGCCATTCACAGCTTaGTCTGGCTCTGTACATTCA +
Preference number: 5 (lower is better)
Translates to: APRPFTALSGSVHSFSTGRPFTA*SGSVHS
Trigger: TGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT...CCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCTAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp GGAAAAGAGGTACCTTTATTTGAACAGAACAAGCACCCTGGCCCCAGGGCAACCAACAACCAAGATTCGTaGGGGTCGAATCGGGATCGC +
Preference number: 5 (lower is better)
Translates to: GKEVPLFEQNKHPGPRATNNQDS*GSNRDR
Trigger: GCGATCCCGATTCGACCCCAACGAATCTTGGTTGTT...GGTTGCCCTGGGGCCAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS-3UTR CAA 90 bp CCACCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCCAGGGAGCGCAGCTaGCTGGGCAGTTTCATAAAA +
Preference number: 5 (lower is better)
Translates to: PPGFRLWMSPNQKPPTENPRERS*LGSFIK
Trigger: TTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG...ATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp GGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTCCCAGGGAGCGCAGCTaGCTGGGCAGTTTCATAAAA +
Preference number: 5 (lower is better)
Translates to: GFRLWMSPNQKPPTENPGPRERS*LGSFIK
Trigger: TTTTATGAAACTGCCCAGCAAGCTGCGCTCCCTGGG...ACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp CCTGTCTGCAGGAGAATTCACAGCTGGTGTGGGACTCAGCCCCTAGGCCATTCAAAGAGGTACCTTTATTaGAACAGAACAAGCACCCTG +
Preference number: 5 (lower is better)
Translates to: PVCRRIHSWCGTQPLGHSKRYLY*NRTSTL
Trigger: CAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTT...TGAATGGCCTAGGGGCTGAGTCCCACACCAGCTGTGAATTCTCCTGCAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp CCTGGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAAGGCAGGAGGATCACTaGAGTCCAGAAGGTCAAGGT +
Preference number: 5 (lower is better)
Translates to: PGFRLWMSPNQKPPTENPRQEDH*SPEGQG
Trigger: ACCTTGACCTTCTGGACTCAAGTGATCCTCCTGCCT...TGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp AGGCCATTCACAGCTTTGTCTGGCTCTGTACATTCATTCAGCACGGGGCAGGGGAAGAGGTACCTTTATTaGAACAGAACAAGCACCCTG +
Preference number: 5 (lower is better)
Translates to: RPFTALSGSVHSFSTGQGKRYLY*NRTSTL
Trigger: CAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTT...CCCCTGCCCCGTGCTGAATGAATGTACAGAGCCAGACAAAGCTGTGAATGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp TTGAGTCCAGAAGGTCAAGGTCACAGTGAGCTGTGGCACCACTGCACTCTAGCCAAGAGGTACCTTTATTaGAACAGAACAAGCACCCTG +
Preference number: 5 (lower is better)
Translates to: LSPEGQGHSELWHHCTLAKRYLY*NRTSTL
Trigger: CAGGGTGCTTGTTCTGTTCAAATAAAGGTACCTCTT...GGCTAGAGTGCAGTGGTGCCACAGCTCACTGTGACCTTGACCTTCTGGACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326631.7
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS-3UTR CAA 90 bp GGCTTCAGGCTTTGGATGTCTCCAAACCAAAAACCTCCCACTGAAAATCCAGGTACCTGGCTTCAGGCTTaGGATGTCTCCAAACCAAAA +
Preference number: 5 (lower is better)
Translates to: GFRLWMSPNQKPPTENPGTWLQA*DVSKPK
Trigger: TTTTGGTTTGGAGACATCCAAAGCCTGAAGCCAGGT...ACCTGGATTTTCAGTGGGAGGTTTTTGGTTTGGAGACATCCAAAGCCTGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000589097.6
ENST00000591099.6
CDS TCA 90 bp CCTTCATCTAGGATTTCTGGCCTCCAGAACTGTAGAGAATGTTTCTaGTATTTAAGCCACCTGGCCTGTGGAATTTTGACAGCCACTCTG +
Preference number: 5 (lower is better)
Translates to: PSSRISGLQNCRECF*YLSHLACGILTATL
Trigger: CAGAGTGGCTGTCAAAATTCCACAGGCCAGGTGGCTTAAATATCAGAAACATTCTCTACAGTTCTGGAGGCCAGAAATCCTAGATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS CCA 72 bp GCACTTGGGCCAGCCATGCCGCCCGCCTCCGCTGCGTaGCGCTGGCGACCCGTGGCTGCTGGCGTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: ALGPAMPPASAA*RWRPVAAGVGG
Trigger: CCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589791.5
CDS GCA 72 bp TGCGCACCTTGGGCCAGCCATGCCGCCCGCCTCCGCTaGGTGGCGCTGGCGACCCGTGGCTGCTGGCGTGGG +
Preference number: 6 (lower is better)
Translates to: CAPWASHAARLR*VALATRGCWRG
Trigger: CCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGTGCGCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp CCAGGGCTAGTGCGCCTGCGCACCTTGGGCCAGCCATaGCGCCCGCCTCCGCTGCGTGGCGCTGGCGACCCG +
Preference number: 6 (lower is better)
Translates to: PGLVRLRTLGQP*RPPPLRGAGDP
Trigger: CGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGTGCGCAGGCGCACTAGCCCTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CAA 90 bp GGCGCAGACACGGAAGCACCCCCAGGGCTAGTGCGCCTGCGCACCTaGGGCCAGCCATGCCGCCCGCCTCCGCTGCGTGGCGCTGGCGAC +
Preference number: 6 (lower is better)
Translates to: GADTEAPPGLVRLRT*GQPCRPPPLRGAGD
Trigger: GTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGTGCGCAGGCGCACTAGCCCTGGGGGTGCTTCCGTGTCTGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp CTGCAGGGCGGGCCCGCCAGCGGATTCGCCACAGCCTaGCCCGGTGCTATCTCGTCCCCAGGCCCGCGCCTG +
Preference number: 6 (lower is better)
Translates to: LQGGPASGFATA*PGAISSPGPRL
Trigger: CAGGCGCGGGCCTGGGGACGAGATAGCACCGGGGCAGGCTGTGGCGAATCCGCTGGCGGGCCCGCCCTGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS CCA 72 bp TGCCGCCCGCCTCCGCTGCGTGGCGCTGGCGACCCGTaGCTGCTGGCGTGGGCGGGGTACCGGTTGGTAGGA +
Preference number: 6 (lower is better)
Translates to: CRPPPLRGAGDP*LLAWAGYRLVG
Trigger: TCCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS GCA 72 bp CTCGGAAACGCCGCCCGGCCGGCTCCCCCGACGCGCTaGTCCCGTACCAAAGGCAGGCCCGTCGCCACCACA +
Preference number: 6 (lower is better)
Translates to: LGNAARPAPPTR*SRTKGRPVATT
Trigger: TGTGGTGGCGACGGGCCTGCCTTTGGTACGGGAGCAGCGCGTCGGGGGAGCCGGCCGGGCGGCGTTTCCGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS GCA 72 bp TTCAGCACTTGGGCCAGCCATGCCGCCCGCCTCCGCTaGGTGGCGCTGGCGACCCGTGGCTGCTGGCGTGGG +
Preference number: 6 (lower is better)
Translates to: FSTWASHAARLR*VALATRGCWRG
Trigger: CCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGTGCTGAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589791.5
CDS CAA 72 bp ACGGAAGCACCCCCAGGGCTAGTGCGCCTGCGCACCTaGGGCCAGCCATGCCGCCCGCCTCCGCTGCGTGGC +
Preference number: 6 (lower is better)
Translates to: TEAPPGLVRLRT*GQPCRPPPLRG
Trigger: GCCACGCAGCGGAGGCGGGCGGCATGGCTGGCCCAAGGTGCGCAGGCGCACTAGCCCTGGGGGTGCTTCCGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS TCA 72 bp ACGCGGCCTTGGGCTCTGGTGAGGAGTAGAGGCGGTTaGGGGCGGCGGCCGACGCGGACCGGGGGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: TRPWALVRSRGG*GRRPTRTGGSL
Trigger: CAGGGAACCCCCGGTCCGCGTCGGCCGCCGCCCTCAACCGCCTCTACTCCTCACCAGAGCCCAAGGCCGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 72 bp CTCGGTCTCCCGGGTCCCGCTCACCGCTGCCCTTCTTaGGGCCCCTCATGCCCAGCTCGGCCGCCATCTCGG +
Preference number: 6 (lower is better)
Translates to: LGLPGPAHRCPS*GPSCPARPPSR
Trigger: CCGAGATGGCGGCCGAGCTGGGCATGAGGGGCCCCAAGAAGGGCAGCGGTGAGCGGGACCCGGGAGACCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586497.1
CDS CCA 72 bp CCGCTGCGTGGCGCTGGCGACCCGTGGCTGCTGGCGTaGGCGGGGTACCGGTTGGTAGGAGAGACGGACCGT +
Preference number: 6 (lower is better)
Translates to: PLRGAGDPWLLA*AGYRLVGETDR
Trigger: ACGGTCCGTCTCTCCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACGCAGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS CAA 90 bp GCCATCTCGGCCGGCTGCCGGGACAGAGCCTGCAGCTCCTTCTCGTaGTACCGCATGGCTCCGCGGGGAACGGGAACCCGGGCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: AISAGCRDRACSSFS*YRMAPRGTGTRAAP
Trigger: GGGCGCGGCCCGGGTTCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000588356.1
ENST00000589097.6
ENST00000591099.6
CDS CCA 72 bp TTCCTTCGCGCCTCGGGACCCTCTGACTCACGCCGCTaGGCGGGCCAGGCATGCGCACACCAGAGGGCCCGT +
Preference number: 6 (lower is better)
Translates to: FLRASGPSDSRR*AGQACAHQRAR
Trigger: ACGGGCCCTCTGGTGTGCGCATGCCTGGCCCGCCCAGCGGCGTGAGTCAGAGGGTCCCGAGGCGCGAAGGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CAA 72 bp GTCGCCCGGAGAGTGTCAGCCGCTCCCTCGCGAAAGTaGGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGT +
Preference number: 6 (lower is better)
Translates to: VARRVSAAPSRK*APCGRSGPRVR
Trigger: ACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCCAACTTTCGCGAGGGAGCGGCTGACACTCTCCGGGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS TCA 72 bp CCCCTCCAGCCTTTTCCTTCGCGCCTCGGGACCCTCTaGCTCACGCCGCTGGGCGGGCCAGGCATGCGCACA +
Preference number: 6 (lower is better)
Translates to: PLQPFPSRLGTL*LTPLGGPGMRT
Trigger: TGTGCGCATGCCTGGCCCGCCCAGCGGCGTGAGTCAGAGGGTCCCGAGGCGCGAAGGAAAAGGCTGGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp TCGGCCGCCATCTCGGCCGGCTGCCGGGACAGAGCCTaGAGCTCCTTCTCGTTGTACCGCATGGCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: SAAISAGCRDRA*SSFSLYRMAPR
Trigger: CCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCAGCCGGCCGAGATGGCGGCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587394.6
ENST00000587962.6
ENST00000588356.1
ENST00000588450.1
ENST00000589097.6
ENST00000591099.6
CDS GCA 72 bp CGGGGCGTGGGTTGCGCCCTTGCATGTGAAGGGGCCTaGGCGGTGACGCAGCTGGCCATGTGCTGCGCGATG +
Preference number: 6 (lower is better)
Translates to: RGVGCALACEGA*AVTQLAMCCAM
Trigger: CATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS GCA 72 bp GGACCCTCTGACTCACGCCGCTGGGCGGGCCAGGCATaGGCACACCAGAGGGCCCGTCTCATTTGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: GPSDSRRWAGQA*AHQRARLICPG
Trigger: TCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGGCCCGCCCAGCGGCGTGAGTCAGAGGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 72 bp GGGACAGAGCCTGCAGCTCCTTCTCGTTGTACCGCATaGCTCCGCGGGGAACGGGAACCCGGGCCGCGCCCT +
Preference number: 6 (lower is better)
Translates to: GTEPAAPSRCTA*LRGEREPGPRP
Trigger: AGGGCGCGGCCCGGGTTCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCAGGCTCTGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000588356.1
ENST00000589097.6
ENST00000591099.6
CDS CCA 72 bp TCGCCCGGAGAGTGTCAGCCGCTCCCTCGCGAAAGTTaGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGTT +
Preference number: 6 (lower is better)
Translates to: SPGECQPLPRES*PRAAAADRGFV
Trigger: AACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCCAACTTTCGCGAGGGAGCGGCTGACACTCTCCGGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS CAA 72 bp GCCGGCTGCCGGGACAGAGCCTGCAGCTCCTTCTCGTaGTACCGCATGGCTCCGCGGGGAACGGGAACCCGG +
Preference number: 6 (lower is better)
Translates to: AGCRDRACSSFS*YRMAPRGTGTR
Trigger: CCGGGTTCCCGTTCCCCGCGGAGCCATGCGGTACAACGAGAAGGAGCTGCAGGCTCTGTCCCGGCAGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000587962.6
ENST00000588356.1
ENST00000589097.6
ENST00000591099.6
CDS CAA 90 bp CTCGCGAAAGTTGGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGTaGAGAGCGTTGTGCGCACGCGCAGTTTGCCTTCCAGGCCGCGCT +
Preference number: 6 (lower is better)
Translates to: LAKVGPVRPQRTEGS*RALCARAVCLPGRA
Trigger: AGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCCAACTTTCGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS TCA 72 bp GTTCACCCTCCGGGGCGTGGGTTGCGCCCTTGCATGTaGAGGGGCCTGCGCGGTGACGCAGCTGGCCATGTG +
Preference number: 6 (lower is better)
Translates to: VHPPGRGLRPCM*RGLRGDAAGHV
Trigger: CACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCACGCCCCGGAGGGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS GCA 72 bp ATTCACCACCAGCTTCACCAGCCGCCGCTTCAGCACTaGGGGCACAGCGCGCACTCAGGGGCGCAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: IHHQLHQPPLQH*GHSAHSGAQAA
Trigger: GGCTGCCTGCGCCCCTGAGTGCGCGCTGTGCCCGCAGTGCTGAAGCGGCGGCTGGTGAAGCTGGTGGTGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585423.5
ENST00000586497.1
CDS TCA 72 bp GCGGGAAGCGCCGCTGGCTTCCCTAGCCCCACTCACTaGTGGAGAAGGTGCCGGGCTCTTCCCGGACGACTC +
Preference number: 6 (lower is better)
Translates to: AGSAAGFPSPTH*WRRCRALPGRL
Trigger: GAGTCGTCCGGGAAGAGCCCGGCACCTTCTCCATCAGTGAGTGGGGCTAGGGAAGCCAGCGGCGCTTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588356.1
ENST00000588450.1
CDS TCA 72 bp TTGGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGTTaGGAGCGTTGTGCGCACGCGCAGTTTGCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: LAPCGRSGPRVR*ERCAHAQFAFQ
Trigger: CTGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp CGGCCGCAGCGGACCGAGGGTTCGTTGAGAGCGTTGTaGGCACGCGCAGTTTGCCTTCCAGGCCGCGCTTTC +
Preference number: 6 (lower is better)
Translates to: RPQRTEGSLRAL*ARAVCLPGRAF
Trigger: GAAAGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCGCTGCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CAA 72 bp GTTGGCCCCGTGCGGCCGCAGCGGACCGAGGGTTCGTaGAGAGCGTTGTGCGCACGCGCAGTTTGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: VGPVRPQRTEGS*RALCARAVCLP
Trigger: TGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTCGGTCCGCTGCGGCCGCACGGGGCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS TCA 72 bp TGGGTTGCGCCCTTGCATGTGAAGGGGCCTGCGCGGTaGCGCAGCTGGCCATGTGCTGCGCGATGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: WVAPLHVKGPAR*RSWPCAARWCC
Trigger: ACAGCACCATCGCGCAGCACATGGCCAGCTGCGTCACCGCGCAGGCCCCTTCACATGCAAGGGCGCAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS CCA 72 bp TCGCAGCATGCCCTGCGATGCGGGGCAGGCCTGTCGTaGGTCCCTTGGTGTTTCTTGCCCGTCACCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SQHALRCGAGLS*VPWCFLPVTFR
Trigger: CCGGAAGGTGACGGGCAAGAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS CAA 72 bp GGGCCAGGCATGCGCACACCAGAGGGCCCGTCTCATTaGCCCCGGAAGTGCTTTCTTTGCCCGCCGTTCGCC +
Preference number: 6 (lower is better)
Translates to: GPGMRTPEGPSH*PRKCFLCPPFA
Trigger: GGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CAA 90 bp CCGCTGGGCGGGCCAGGCATGCGCACACCAGAGGGCCCGTCTCATTaGCCCCGGAAGTGCTTTCTTTGCCCGCCGTTCGCCAAACGAAGT +
Preference number: 6 (lower is better)
Translates to: PLGGPGMRTPEGPSH*PRKCFLCPPFAKRS
Trigger: ACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGGCCCGCCCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp TTCTCGGCTGTCCATGGCTCGCAGCATGCCCTGCGATaGGGGGCAGGCCTGTCGTGGGTCCCTTGGTGTTTC +
Preference number: 6 (lower is better)
Translates to: FSAVHGSQHALR*GAGLSWVPWCF
Trigger: GAAACACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS GCA 72 bp GGCCAGGCATGCGCACACCAGAGGGCCCGTCTCATTTaGCCCGGAAGTGCTTTCTTTGCCCGCCGTTCGCCA +
Preference number: 6 (lower is better)
Translates to: GQACAHQRARLI*PGSAFFARRSP
Trigger: TGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGCATGCCTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp GAGGGTTCGTTGAGAGCGTTGTGCGCACGCGCAGTTTaGCTTCCAGGCCGCGCTTTCAGCCTCTCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: EGSLRALCARAV*LPGRAFSLSPS
Trigger: GGAGGGGGAGAGGCTGAAAGCGCGGCCTGGAAGGCAAACTGCGCGTGCGCACAACGCTCTCAACGAACCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp TGTATTTCTCGGCTGTCCATGGCTCGCAGCATGCCCTaGGATGCGGGGCAGGCCTGTCGTGGGTCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: CISRLSMARSMP*DAGQACRGSLG
Trigger: ACCAAGGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS CCA 72 bp CAAGGTGGAACAGAATCAAGGCACCCCAGCGATGGCTaGCACCCCTTTCTAGAGCGGCCAGGCGCAGGCGGA +
Preference number: 6 (lower is better)
Translates to: QGGTESRHPSDG*HPFLERPGAGG
Trigger: TCCGCCTGCGCCTGGCCGCTCTAGAAAGGGGTGCCAGCCATCGCTGGGGTGCCTTGATTCTGTTCCACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS CCA 72 bp GGACCAAGGTGGAACAGAATCAAGGCACCCCAGCGATaGCTGGCACCCCTTTCTAGAGCGGCCAGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: GPRWNRIKAPQR*LAPLSRAARRR
Trigger: CCTGCGCCTGGCCGCTCTAGAAAGGGGTGCCAGCCATCGCTGGGGTGCCTTGATTCTGTTCCACCTTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS CAA 90 bp GCGCACACCAGAGGGCCCGTCTCATTTGCCCCGGAAGTGCTTTCTTaGCCCGCCGTTCGCCAAACGAAGTCGTGGAGGTGGCGAAACGAG +
Preference number: 6 (lower is better)
Translates to: AHTRGPVSFAPEVLS*PAVRQTKSWRWRNE
Trigger: CTCGTTTCGCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp GCAAGCCACTCAGCTGGAACCTGGCCTCCTCGGATATaGCGAACTGTTCCAGGGGGTCCTTGCCCGTCACCT +
Preference number: 6 (lower is better)
Translates to: ASHSAGTWPPRI*RTVPGGPCPSP
Trigger: AGGTGACGGGCAAGGACCCCCTGGAACAGTTCGGCATATCCGAGGAGGCCAGGTTCCAGCTGAGTGGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326631.7
ENST00000586608.3
ENST00000589097.6
ENST00000589791.5
ENST00000591099.6
CDS GCA 72 bp ACTTTTGTATTTCTCGGCTGTCCATGGCTCGCAGCATaGCCTGCGATGCGGGGCAGGCCTGTCGTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: TFVFLGCPWLAA*PAMRGRPVVGP
Trigger: GGGACCCACGACAGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS GCA 72 bp GAGGGCCCGTCTCATTTGCCCCGGAAGTGCTTTCTTTaGCCGCCGTTCGCCAAACGAAGTCGTGGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: EGPSHLPRKCFL*PPFAKRSRGGG
Trigger: GCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 72 bp GACCCAAGCTTAAGTGGACTCGGCAGGTGGGAAGGGTaGTGCCCGCCAGGAGAACTTGACCTTGAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: DPSLSGLGRWEG*CPPGELDLELP
Trigger: GGGCAGCTCAAGGTCAAGTTCTCCTGGCGGGCACCACCCTTCCCACCTGCCGAGTCCACTTAAGCTTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588356.1
ENST00000588450.1
CDS CAA 72 bp GGCGACCCGTGGCTGCTGGCGTGGGCGGGGTACCGGTaGGTAGGAGAGACGGACCGTTGTTACATAACCATT +
Preference number: 6 (lower is better)
Translates to: GDPWLLAWAGYR*VGETDRCYITI
Trigger: AATGGTTATGTAACAACGGTCCGTCTCTCCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS GCA 72 bp CGCACACCAGAGGGCCCGTCTCATTTGCCCCGGAAGTaGTTTCTTTGCCCGCCGTTCGCCAAACGAAGTCGT +
Preference number: 6 (lower is better)
Translates to: RTPEGPSHLPRK*FLCPPFAKRSR
Trigger: ACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCTGGTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CCA 72 bp TCTTTGCCCGCCGTTCGCCAAACGAAGTCGTGGAGGTaGCGAAACGAGGAGGAGATAACGCGGCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: SLPAVRQTKSWR*RNEEEITRPWA
Trigger: AGCCCAAGGCCGCGTTATCTCCTCCTCGTTTCGCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CAA 72 bp AGAGGGCCCGTCTCATTTGCCCCGGAAGTGCTTTCTTaGCCCGCCGTTCGCCAAACGAAGTCGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: RGPVSFAPEVLS*PAVRQTKSWRW
Trigger: CCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCACTTCCGGGGCAAATGAGACGGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CAA 90 bp CGTGGCGCTGGCGACCCGTGGCTGCTGGCGTGGGCGGGGTACCGGTaGGTAGGAGAGACGGACCGTTGTTACATAACCATTAAACTGAAA +
Preference number: 6 (lower is better)
Translates to: RGAGDPWLLAWAGYR*VGETDRCYITIKLK
Trigger: TTTCAGTTTAATGGTTATGTAACAACGGTCCGTCTCTCCTACCAACCGGTACCCCGCCCACGCCAGCAGCCACGGGTCGCCAGCGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589097.6
ENST00000589791.5
CDS CCA 72 bp CAAGGAACCTGGAGGATACTGGCCACCACTAGGAACTaGGAGATTCCCCTCGGCCTCAGAAGGATTCGGCCC +
Preference number: 6 (lower is better)
Translates to: QGTWRILATTRN*EIPLGLRRIRP
Trigger: GGGCCGAATCCTTCTGAGGCCGAGGGGAATCTCCCAGTTCCTAGTGGTGGCCAGTATCCTCCAGGTTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS CCA 72 bp GTGACGCTTCCACAAGCCAAGGAACCTGGAGGATACTaGCCACCACTAGGAACTGGGAGATTCCCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: VTLPQAKEPGGY*PPLGTGRFPSA
Trigger: GGCCGAGGGGAATCTCCCAGTTCCTAGTGGTGGCCAGTATCCTCCAGGTTCCTTGGCTTGTGGAAGCGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS CCA 72 bp GTGCTTTCTTTGCCCGCCGTTCGCCAAACGAAGTCGTaGAGGTGGCGAAACGAGGAGGAGATAACGCGGCCT +
Preference number: 6 (lower is better)
Translates to: VLSLPAVRQTKS*RWRNEEEITRP
Trigger: AGGCCGCGTTATCTCCTCCTCGTTTCGCCACCTCCACGACTTCGTTTGGCGAACGGCGGGCAAAGAAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS CAA 72 bp GAACTTGACCTTGAGCTGCCCGTGGACAATGCACTCTaGTGTTTGAGGAGGGTGGCGCCAGGCTGGGGACAC +
Preference number: 6 (lower is better)
Translates to: ELDLELPVDNAL*CLRRVAPGWGH
Trigger: GTGTCCCCAGCCTGGCGCCACCCTCCTCAAACACAAGAGTGCATTGTCCACGGGCAGCTCAAGGTCAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588356.1
ENST00000588450.1
CDS TCA 72 bp GGCGTCTGTGTAGAAGGGGAAATGTGGGCACAGACGTaGTGCAAGGAGGACAAGGTGACGCTTCCACAAGCC +
Preference number: 6 (lower is better)
Translates to: GVCVEGEMWAQT*CKEDKVTLPQA
Trigger: GGCTTGTGGAAGCGTCACCTTGTCCTCCTTGCATCACGTCTGTGCCCACATTTCCCCTTCTACACAGACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS CAA 90 bp TGGCCATGTGCTGCGCGATGGTGCTGTGAGGACGGCGCGGGCACGTaGAACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATGGCT +
Preference number: 6 (lower is better)
Translates to: WPCAARWCCEDGAGT*NKCIYFCISRLSMA
Trigger: AGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTGCCCGCGCCGTCCTCACAGCACCATCGCGCAGCACATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS TCA 72 bp AACCAAGATTCGTTGGGGTCGAATCGGGATCGCGGCTaGAATGGTTTCGGCCGCCTTCCTTGTAGCCGAGAA +
Preference number: 6 (lower is better)
Translates to: NQDSLGSNRDRG*NGFGRLPCSRE
Trigger: TTCTCGGCTACAAGGAAGGCGGCCGAAACCATTTCAGCCGCGATCCCGATTCGACCCCAACGAATCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589097.6
CDS GCA 72 bp GAGCCTCCATCCACTCCTGACACTGCTCCTCGCTGCTaGACTCAAAGTGATACTTCCTCTCAGGGTCCTCAA +
Preference number: 6 (lower is better)
Translates to: EPPSTPDTAPRC*TQSDTSSQGPQ
Trigger: TTGAGGACCCTGAGAGGAAGTATCACTTTGAGTGCAGCAGCGAGGAGCAGTGTCAGGAGTGGATGGAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000326631.7
ENST00000585423.5
ENST00000586497.1
ENST00000587394.6
ENST00000587962.6
ENST00000588450.1
ENST00000588545.2
ENST00000589097.6
ENST00000589791.5
CDS GCA 72 bp TTTCCAGCCCGGGGCCATATAACAATGCTAGACCCATaGTACTCTTGGCAGCTGGGGAAACGCTTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: FPARGHITMLDP*YSWQLGKRFGW
Trigger: CCACCCAAAGCGTTTCCCCAGCTGCCAAGAGTAGCATGGGTCTAGCATTGTTATATGGCCCCGGGCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS CCA 72 bp ACAAGTGCATTTACTTTTGTATTTCTCGGCTGTCCATaGCTCGCAGCATGCCCTGCGATGCGGGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: TSAFTFVFLGCP*LAACPAMRGRP
Trigger: AGGCCTGCCCCGCATCGCAGGGCATGCTGCGAGCCATGGACAGCCGAGAAATACAAAAGTAAATGCACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS CCA 72 bp GGAGGACAAGGTGACGCTTCCACAAGCCAAGGAACCTaGAGGATACTGGCCACCACTAGGAACTGGGAGATT +
Preference number: 6 (lower is better)
Translates to: GGQGDASTSQGT*RILATTRNWEI
Trigger: AATCTCCCAGTTCCTAGTGGTGGCCAGTATCCTCCAGGTTCCTTGGCTTGTGGAAGCGTCACCTTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588450.1
CDS CAA 72 bp GCTGCGCGATGGTGCTGTGAGGACGGCGCGGGCACGTaGAACAAGTGCATTTACTTTTGTATTTCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: AARWCCEDGAGT*NKCIYFCISRL
Trigger: CAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTGCCCGCGCCGTCCTCACAGCACCATCGCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS TCA 72 bp CTGCGCGATGGTGCTGTGAGGACGGCGCGGGCACGTTaGACAAGTGCATTTACTTTTGTATTTCTCGGCTGT +
Preference number: 6 (lower is better)
Translates to: LRDGAVRTARAR*TSAFTFVFLGC
Trigger: ACAGCCGAGAAATACAAAAGTAAATGCACTTGTTCAACGTGCCCGCGCCGTCCTCACAGCACCATCGCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587394.6
CDS TCA 72 bp TGCACTCAAAGTGATACTTCCTCTCAGGGTCCTCAATaGAGCCTGGGGATGGAACACCTGTGGTCGGTCCTA +
Preference number: 6 (lower is better)
Translates to: CTQSDTSSQGPQ*SLGMEHLWSVL
Trigger: TAGGACCGACCACAGGTGTTCCATCCCCAGGCTTCATTGAGGACCCTGAGAGGAAGTATCACTTTGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588450.1
ENST00000588545.2