RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000068137

Ensembl transcript IDs: ENST00000293349.10, ENST00000456950.6, ENST00000587627.1, ENST00000591022.6, ENST00000591196.5, ENST00000591476.5, ENST00000591490.5, ENST00000591544.1, ENST00000592974.5

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTaGCCCAAGCAGCCAGACTGTCCCTGGGGCTCGTCCAGGCCCGGG +
Preference number: 1 (lower is better)
Translates to: GRREVVTSWQAQSCS*PKQPDCPWGSSRPG
Trigger: CCCGGGCCTGGACGAGCCCCAGGGACAGTCTGGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
3UTR GCA 90 bp GCTGCAGGCAGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTaGAGCTGCCCCAAGCAGCCAGACTGTCCCTGGGGCTCGTCCAGG +
Preference number: 1 (lower is better)
Translates to: AAGRREVVTSWQAQS*SCPKQPDCPWGSSR
Trigger: CCTGGACGAGCCCCAGGGACAGTCTGGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCTGCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591196.5
3UTR GCA 90 bp ACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTaGAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGT +
Preference number: 1 (lower is better)
Translates to: THTHCSPWVWDVPCP*RAKRVHVSLKSQSS
Trigger: ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
3UTR GCA 90 bp ACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTaGCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAAT +
Preference number: 1 (lower is better)
Translates to: TRKLPTPIVALGCGM*PVPAGPKGSMFPSN
Trigger: ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
3UTR-3UTR CCA 90 bp GGCAGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTGCCCCAAGGTGTCTGGCAGGTCTTaGCATGGAGGAGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: GRREVVTSWQAQSCSCPKVSGRS*HGGEEL
Trigger: CAGCTCTTCTCCTCCATGCCAAGACCTGCCAGACAC...CTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
3UTR-3UTR CCA 90 bp AAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGCAATGATCTCTTCCACCTaGGGGCTCTGCAGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: KLPTPIVALGCGMCPVPAMISST*GLCRRS
Trigger: GCTCCTCCTGCAGAGCCCCCAGGTGGAAGAGATCAT...TGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
3UTR-3UTR GCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGGCAGGCTCAGTCCTaGAGCTGCCCCAAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMWQAQS*SCPKQP
Trigger: TGGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCA...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591196.5
3UTR-3UTR GCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGGATGTGCCCTGTCCCTaGAGGGCCAAAAGGGTCCAT +
Preference number: 2 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMDVPCP*RAKRVH
Trigger: ATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
3UTR GCA 72 bp GAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTaGCCCAAGCAGCCAGACTGTCCCTGGGGCTCGTCC +
Preference number: 3 (lower is better)
Translates to: EVVTSWQAQSCS*PKQPDCPWGSS
Trigger: GGACGAGCCCCAGGGACAGTCTGGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
3UTR GCA 72 bp AGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTaGAGCTGCCCCAAGCAGCCAGACTGTCCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: RREVVTSWQAQS*SCPKQPDCPWG
Trigger: GCCCCAGGGACAGTCTGGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591196.5
3UTR GCA 72 bp CATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTaGAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCT +
Preference number: 3 (lower is better)
Translates to: HCSPWVWDVPCP*RAKRVHVSLKS
Trigger: AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GCAGGGCCTCTCGGGGGAGGGGTTGGCCAAGTAGGCATTCACCAGCTGCATGATCCAGGGAGTCCCGCGTaGGCACAAACCAGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AGPLGGGVGQVGIHQLHDPGSPA*AQTRLG
Trigger: GCCGAGCCTGGTTTGTGCTCACGCGGGACTCCCTGG...ATCATGCAGCTGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR TCA 90 bp GCAGGGCCTCTCGGGGGAGGGGTTGGCCAAGTAGGCATTCACCAGCTGCATGATCCGAGCACAGGCTGGTaGGCACGAGGCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: AGPLGGGVGQVGIHQLHDPSTGW*ARGSRD
Trigger: GTCTCGGGAGCCTCGTGCTCACCAGCCTGTGCTCGG...ATCATGCAGCTGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR CCA 90 bp GCAGGGCCTCTCGGGGGAGGGGTTGGCCAAGTAGGCATTCACCAGCTGCATGATCCACCTCCCCCGCCGTaGTGTGGGAGTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: AGPLGGGVGQVGIHQLHDPPPPP*CGSRWP
Trigger: TGGCCATCGACTCCCACACCACGGCGGGGGAGGTGG...ATCATGCAGCTGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR GCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGATCCGGGCGAGGAGCTaGGGATGGGGGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRIRARS*GWGRGQ
Trigger: CTGCCCGCGCCCCCATCCGCAGCTCCTCGCCCGGAT...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GGGGTTGGCCAAGTAGGCATTCACCAGCTGCATGATCTCTTCCACCTGGGGGCTGCCCCCTCCAGCGCCTaGAGCGCCAAGAACAGCCGC +
Preference number: 4 (lower is better)
Translates to: GVGQVGIHQLHDLFHLGAAPSSA*SAKNSR
Trigger: GCGGCTGTTCTTGGCGCTGCAGGCGCTGGAGGGGGC...AGCCCCCAGGTGGAAGAGATCATGCAGCTGGTGAATGCCTACTTGGCCAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR GCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGGCACCAGCTCTCTaGCGCGCGTCCGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPRAPAL*RASGPA
Trigger: CGCTGGGCCGGACGCGCGGCAGAGAGCTGGTGCCCT...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGGGGGGTCGGAGGAACTaGCGGGGCTCCGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQGGRRN*RGSDPS
Trigger: GCTCGGGTCGGAGCCCCGCCAGTTCCTCCGACCCCC...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGAGGGCCGCAGGGTCTTaGGTAGCCGGGAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLRAAGS*VAGSPG
Trigger: CCCCGGGCTCCCGGCTACCCAAGACCCTGCGGCCCT...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCAGGGCCGCAGGGTCTTaGGTAGCCGGGAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIRAAGS*VAGSPG
Trigger: CCCCGGGCTCCCGGCTACCCAAGACCCTGCGGCCCT...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTGCCCCAAGCAGTCCCCCGCCGTGGTGTaGGAGTCGATGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: RREVVTSWQAQSCSCPKQSPAVV*ESMATA
Trigger: TGCTGTGGCCATCGACTCCCACACCACGGCGGGGGA...CTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR CCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCGCTCCGCCCGCCTCTTaGCCAGGCCCGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPAPPAS*PGPGSR
Trigger: TCTGGAGCCCGGGCCTGGCCAAGAGGCGGGCGGAGC...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGGCTCCGCCCGCCTCTTaGCCAGGCCCGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLAPPAS*PGPGSR
Trigger: TCTGGAGCCCGGGCCTGGCCAAGAGGCGGGCGGAGC...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCGGCCCGGGCGCTGGCTaGGAGGGGAGGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPGPGAG*EGRCLA
Trigger: TGCCAGACACCTCCCCTCCCAGCCAGCGCCCGGGCC...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCACCGCGGCCAAGCTGGTaGGCACGTCGGCCACGAGGG +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAPRPSW*ARRPRG
Trigger: CCCTCGTGGCCGACGTGCTCACCAGCTTGGCCGCGG...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293349.10
CDS-3UTR GCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCGGGGGCAGTGTCCGGTaGAGCGTCCGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLGGSVR*SVRGGQ
Trigger: CTGCCCACCTCGGACGCTGCACCGGACACTGCCCCC...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR GCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAATCCGGGCGAGGAGCTaGGGATGGGGGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPIRARS*GWGRGQ
Trigger: CTGCCCGCGCCCCCATCCGCAGCTCCTCGCCCGGAT...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAAGGGCACCAGCTCTCTaGCGCGCGTCCGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRARAPAL*RASGPA
Trigger: CGCTGGGCCGGACGCGCGGCAGAGAGCTGGTGCCCT...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGTCCCGCTGCAGGCTCTaGAGGCGCAGCGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISESRCRL*RRSAAR
Trigger: CCTGGCGGCGCTGCGCCTGCAGAGCCTGCAGCGGGA...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGCTCCCTCGCGGGCAATaGTTCCCGCAGTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQLPRGQ*FPQCGR
Trigger: CCGGCCGCACTGCGGGAAGCATTGCCCGCGAGGGAG...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCTCCCTCGCGGGCAATaGTTCCCGCAGTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLLPRGQ*FPQCGR
Trigger: CCGGCCGCACTGCGGGAAGCATTGCCCGCGAGGGAG...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGGGGGTCGGAGGAACTaGCGGGGCTCCGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQGGRRN*RGSDPS
Trigger: GCTCGGGTCGGAGCCCCGCCAGTTCCTCCGACCCCC...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp GGCAGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTGCCCCAAGAGGCCCGCTCCTCACTaGCTGAGTCAGCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: GRREVVTSWQAQSCSCPKRPAPH*LSQRHF
Trigger: GAAGTGACGCTGACTCAGCCAGTGAGGAGCGGGCCT...CTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGAGGGCCGCAGGGTCTTaGGTAGCCGGGAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISERAAGS*VAGSPG
Trigger: CCCCGGGCTCCCGGCTACCCAAGACCCTGCGGCCCT...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGGCCAGGGCTCGCTCCTaGGCCCCTCGCTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQARARS*APRCSY
Trigger: GTACGAGCAGCGAGGGGCCCAGGAGCGAGCCCTGGC...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCGCCAGGGCTCGCTCCTaGGCCCCTCGCTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLARARS*APRCSY
Trigger: GTACGAGCAGCGAGGGGCCCAGGAGCGAGCCCTGGC...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGCCAGACTGTCCCTaGGGCTCGTCCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLQPDCP*GSSRPG
Trigger: CCCGGGCCTGGACGAGCCCCAGGGACAGTCTGGCTG...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCCGAGCACAGGCTGGTaGGCACGAGGCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRPSTGW*ARGSRD
Trigger: GTCTCGGGAGCCTCGTGCTCACCAGCCTGTGCTCGG...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCGGACCTGGGGCGCTaGCTCCATAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWPDLGR*LHRAGA
Trigger: TGCCCCTGCCCTATGGAGTCAGCGCCCCAGGTCCGG...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGCCGGACCTGGGGCGCTaGCTCCATAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQPDLGR*LHRAGA
Trigger: TGCCCCTGCCCTATGGAGTCAGCGCCCCAGGTCCGG...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCCCAGCGCTCAGCCTCTaGCTGGCGTGGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPPALSL*LAWGAE
Trigger: CTCTGCTCCCCACGCCAGGCAGAGGCTGAGCGCTGG...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGCTCCTCGCGCAGGGGTaGATAGCCCGGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRLLAQG*IARTWG
Trigger: GCCCCAGGTCCGGGCTATGCACCCCTGCGCGAGGAG...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCTCCTCGCGCAGGGGTaGATAGCCCGGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISELLAQG*IARTWG
Trigger: GCCCCAGGTCCGGGCTATGCACCCCTGCGCGAGGAG...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGCCCCCTCCAGCGCCTaGAGCGCCAAGAACAGCCGC +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPAPSSA*SAKNSR
Trigger: GCGGCTGTTCTTGGCGCTGCAGGCGCTGGAGGGGGC...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTGCCCCCTCCAGCGCCTaGAGCGCCAAGAACAGCCGC +
Preference number: 4 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSAPSSA*SAKNSR
Trigger: GCGGCTGTTCTTGGCGCTGCAGGCGCTGGAGGGGGC...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTGCCCCAAGCAGATGCAGGTGAGGAGTTaGCAGTACCGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RREVVTSWQAQSCSCPKQMQVRS*QYRRAA
Trigger: TGCGGCCCTGCGGTACTGGCAACTCCTCACCTGCAT...CTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTAGGGCACCAGCTCTCTaGCGCGCGTCCGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPRAPAL*RASGPA
Trigger: CGCTGGGCCGGACGCGCGGCAGAGAGCTGGTGCCCT...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTTCCCGCTGCAGGCTCTaGAGGCGCAGCGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPSRCRL*RRSAAR
Trigger: CCTGGCGGCGCTGCGCCTGCAGAGCCTGCAGCGGGA...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCCCTCAGCTCGGCCCATaGCCCGTAGCCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPPQLGP*PVAASS
Trigger: GCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGG...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCAGGGCCTCTCGGGGGAGGGGTTGGCCAAGTAGGCATTCACCAGCTGCATGATTGGTGTGGGAGTCGATaGCCACAGCACAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: AGPLGGGVGQVGIHQLHDWCGSR*PQHRHQ
Trigger: CTGGTGCCTGTGCTGTGGCCATCGACTCCCACACCA...ATCATGCAGCTGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGAGGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR CCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCCCACCTCCCCCGCCGTaGTGTGGGAGTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIPPPPP*CGSRWP
Trigger: TGGCCATCGACTCCCACACCACGGCGGGGGAGGTGG...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGGCCAGGGCTCGCTCCTaGGCCCCTCGCTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWARARS*APRCSY
Trigger: GTACGAGCAGCGAGGGGCCCAGGAGCGAGCCCTGGC...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGCCAGGTAGGCGGCCATaGCCTCAGCTCGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQPGRRP*PQLGPC
Trigger: GCATGGGCCGAGCTGAGGCCATGGCCGCCTACCTGG...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCCAGGTAGGCGGCCATaGCCTCAGCTCGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLPGRRP*PQLGPC
Trigger: GCATGGGCCGAGCTGAGGCCATGGCCGCCTACCTGG...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTGGGCTCCGTCTCCCCTaGCCGGGAGAGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSGLRLP*PGEGHG
Trigger: GCCATGTCCCTCTCCCGGCCAGGGGAGACGGAGCCC...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCAGGGAGTCCCGCGTaGGCACAAACCAGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWPGSPA*AQTRLG
Trigger: GCCGAGCCTGGTTTGTGCTCACGCGGGACTCCCTGG...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCCAGGGAGTCCCGCGTaGGCACAAACCAGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVPGSPA*AQTRLG
Trigger: GCCGAGCCTGGTTTGTGCTCACGCGGGACTCCCTGG...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCCGCTGCTGCTGAACTaGTCCAGGGAGTCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLPLLLN*SRESRV
Trigger: CACGCGGGACTCCCTGGATCAGTTCAGCAGCAGCGG...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCACCGAGCACAGGCTGGTaGGCACGAGGCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAPSTGW*ARGSRD
Trigger: GTCTCGGGAGCCTCGTGCTCACCAGCCTGTGCTCGG...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGACCGGACCTGGGGCGCTaGCTCCATAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRPDLGR*LHRAGA
Trigger: TGCCCCTGCCCTATGGAGTCAGCGCCCCAGGTCCGG...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGCCAGCGCTCAGCCTCTaGCTGGCGTGGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRPALSL*LAWGAE
Trigger: CTCTGCTCCCCACGCCAGGCAGAGGCTGAGCGCTGG...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTGCCCCAAGCAGCCGTCTGCTTAGCCAGCTaGAGGAAGAGTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: EGSRDLLAGSVLQLPQAAVCLAS*RKSSSR
Trigger: CCGGGATGAACTCTTCCTGCAGCTGGCTAAGCAGAC...GGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR GCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCCAGCCCCCGGACAGTaGACGGTACACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLPAPGQ*TVHSSS
Trigger: GGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGG...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGACAGCGCGAATGCGTTaGGGCTCCGGGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLTARMR*GSGPSP
Trigger: TGGGCTTGGCCCGGAGCCGCAACGCATTCGCGCTGT...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCTGGGCCCCTCGCTaGTCGTACAGCGCGAATGCG +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQISWAPR*SYSANA
Trigger: CGCATTCGCGCTGTACGAGCAGCGAGGGGCCCAGGA...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGGGAGAGAAGTCCCGCTaGAGGCTCTGCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLGEKSR*RLCRRS
Trigger: GCTGCGCCTGCAGAGCCTGCAGCGGGACTTCTCTCC...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTCTCCCTCGCGGGCAATaGTTCCCGCAGTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPLPRGQ*FPQCGR
Trigger: CCGGCCGCACTGCGGGAAGCATTGCCCGCGAGGGAG...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGCCTCAGCTCGGCCCATaGCCCGTAGCCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQPQLGP*PVAASS
Trigger: GCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGG...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCACCTCAGCTCGGCCCATaGCCCGTAGCCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPPQLGP*PVAASS
Trigger: GCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGG...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGGAGGAGGCAGTGTCCTaGGCTGGGGTGCAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQEEAVS*AGVQGD
Trigger: GTCCCCTTGCACCCCAGCCCAGGACACTGCCTCCTC...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCTCCCCCGCCGTGGTGTaGGAGTCGATGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLSPAVV*ESMATA
Trigger: TGCTGTGGCCATCGACTCCCACACCACGGCGGGGGA...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCACCACCTCCCCCGCCGTaGTGTGGGAGTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAPPPPP*CGSRWP
Trigger: TGGCCATCGACTCCCACACCACGGCGGGGGAGGTGG...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGCCAGGTAGGCGGCCATaGCCTCAGCTCGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLPGRRP*PQLGPC
Trigger: GCATGGGCCGAGCTGAGGCCATGGCCGCCTACCTGG...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCGCCGGGAGAGGGACATaGCCTTGGCTCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPAGRGT*PWLPSP
Trigger: TGGGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGC...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGGGCTCCGTCTCCCCTaGCCGGGAGAGGGACATGGC +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPGLRLP*PGEGHG
Trigger: GCCATGTCCCTCTCCCGGCCAGGGGAGACGGAGCCC...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGTGGGGGCCCATTAGCTaGCAGGCGGCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRWGPIS*QAATWP
Trigger: TGGCCATGTGGCCGCCTGCCAGCTAATGGGCCCCCA...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCGCCCTTTCTCCGGGATaGGGCTCCAAGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIALSPG*GSKSPP
Trigger: GGGAGGAGACTTGGAGCCTCATCCCGGAGAAAGGGC...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGCACCGCTGCTGCTGAACTaGTCCAGGGAGTCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: KLPTPIVALGCGMCPVPAPLLLN*SRESRV
Trigger: CACGCGGGACTCCCTGGATCAGTTCAGCAGCAGCGG...TGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGTGTCCTGGGCTGGGGTaGAAGGGGACGCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRCPGLG*KGTLAR
Trigger: TCTGGCTAGCGTCCCCTTGCACCCCAGCCCAGGACA...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR GCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGCTGTCTCCTTACGCCTaGGCTCTGGGCCGGTCACCG +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQLSPYA*ALGRSP
Trigger: CGGTGACCGGCCCAGAGCGCAGGCGTAAGGAGACAG...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCTGTCTCCTTACGCCTaGGCTCTGGGCCGGTCACCG +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWLSPYA*ALGRSP
Trigger: CGGTGACCGGCCCAGAGCGCAGGCGTAAGGAGACAG...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCTGTCTCCTTACGCCTaGGCTCTGGGCCGGTCACCG +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISELSPYA*ALGRSP
Trigger: CGGTGACCGGCCCAGAGCGCAGGCGTAAGGAGACAG...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTCCAGCGCTCAGCCTCTaGCTGGCGTGGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPPALSL*LAWGAE
Trigger: CTCTGCTCCCCACGCCAGGCAGAGGCTGAGCGCTGG...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTTTGGAGCACACCCTaGATCAAGGGCCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAVWSTP*IKGPGR
Trigger: GCGCCCCGGGCCCTTGATGCAGGGTGTGCTCCAAAC...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATGTTTGGAGCACACCCTaGATCAAGGGCCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: CGMCPVPAGPKGSMFPSNVWSTP*IKGPGR
Trigger: GCGCCCCGGGCCCTTGATGCAGGGTGTGCTCCAAAC...ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGGTTTGGAGCACACCCTaGATCAAGGGCCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWVWSTP*IKGPGR
Trigger: GCGCCCCGGGCCCTTGATGCAGGGTGTGCTCCAAAC...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGGCAGGGCCCGAGGTCTaGTTAGCCAGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLAGPEV*LASCRK
Trigger: CTTCCTGCAGCTGGCTAAGCAGACCTCGGGCCCTGC...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCGCAGGGCCCGAGGTCTaGTTAGCCAGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIAGPEV*LASCRK
Trigger: CTTCCTGCAGCTGGCTAAGCAGACCTCGGGCCCTGC...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGGAGTCCGGGAGTGCCTaGTCGGTCCTCTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLESGSA*SVLSKC
Trigger: GCACTTGGAGAGGACCGAGCAGGCACTCCCGGACTC...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGGAGTCCGGGAGTGCCTaGTCGGTCCTCTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQESGSA*SVLSKC
Trigger: GCACTTGGAGAGGACCGAGCAGGCACTCCCGGACTC...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GTTGGCCAAGTAGGCATTCACCAGCTGCATGATCTCTTCCACCTGGGGGCTCTGGAGTCCGGGAGTGCCTaGTCGGTCCTCTCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: VGQVGIHQLHDLFHLGALESGSA*SVLSKC
Trigger: GCACTTGGAGAGGACCGAGCAGGCACTCCCGGACTC...CAGAGCCCCCAGGTGGAAGAGATCATGCAGCTGGTGAATGCCTACTTGGCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR GCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGCCAGCCCCCGGACAGTaGACGGTACACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRPAPGQ*TVHSSS
Trigger: GGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGG...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTACAGCGCGAATGCGTTaGGGCTCCGGGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSTARMR*GSGPSP
Trigger: TGGGCTTGGCCCGGAGCCGCAACGCATTCGCGCTGT...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGACAGCGCGAATGCGTTaGGGCTCCGGGCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWTARMR*GSGPSP
Trigger: TGGGCTTGGCCCGGAGCCGCAACGCATTCGCGCTGT...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTTCCTGGGCCCCTCGCTaGTCGTACAGCGCGAATGCG +
Preference number: 4 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSSWAPR*SYSANA
Trigger: CGCATTCGCGCTGTACGAGCAGCGAGGGGCCCAGGA...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATGAGTGTCCAGCCCTGTaGGGGGCAGTGTCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: CGMCPVPAGPKGSMFPSNECPAL*GAVSGA
Trigger: TGCACCGGACACTGCCCCCCACAGGGCTGGACACTC...ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGAGGAGGCAGTGTCCTaGGCTGGGGTGCAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQEEAVS*AGVQGD
Trigger: GTCCCCTTGCACCCCAGCCCAGGACACTGCCTCCTC...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCTTACGCCTGCGCTCTaGGCCGGTCACCGAGCACAG +
Preference number: 4 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSLTPAL*AGHRAQ
Trigger: CTGTGCTCGGTGACCGGCCCAGAGCGCAGGCGTAAG...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCACTTACGCCTGCGCTCTaGGCCGGTCACCGAGCACAG +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPLTPAL*AGHRAQ
Trigger: CTGTGCTCGGTGACCGGCCCAGAGCGCAGGCGTAAG...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTTACGCCTGCGCTCTaGGCCGGTCACCGAGCACAG +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVLTPAL*AGHRAQ
Trigger: CTGTGCTCGGTGACCGGCCCAGAGCGCAGGCGTAAG...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCCTGAGCAGTAGCTaGGTGGGGGTCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQISLSSS*VGVSRG
Trigger: ACCCCTGGAGACCCCCACCCAGCTACTGCTCAGGGA...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCGAGGGCAACGGCCTCTaGGTCCCCGCAACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLEGNGL*VPATFL
Trigger: CAGGAAAGTTGCGGGGACCCAGAGGCCGTTGCCCTC...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCGAGGGCAACGGCCTCTaGGTCCCCGCAACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPEGNGL*VPATFL
Trigger: CAGGAAAGTTGCGGGGACCCAGAGGCCGTTGCCCTC...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGTGCATAGCCCGGACCTaGGGCGCTGACTCCATAGGG +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRCIART*GADSIG
Trigger: CCCTATGGAGTCAGCGCCCCAGGTCCGGGCTATGCA...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGGCCGGGAGAGGGACATaGCCTTGGCTCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISEAGRGT*PWLPSP
Trigger: TGGGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGC...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCGCCGGGAGAGGGACATaGCCTTGGCTCCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVAGRGT*PWLPSP
Trigger: TGGGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGC...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGTGGGGGCCCATTAGCTaGCAGGCGGCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISEWGPIS*QAATWP
Trigger: TGGCCATGTGGCCGCCTGCCAGCTAATGGGCCCCCA...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGTGGGGGCCCATTAGCTaGCAGGCGGCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWWGPIS*QAATWP
Trigger: TGGCCATGTGGCCGCCTGCCAGCTAATGGGCCCCCA...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGCTCAAGGCCAGGGTGTaGGGGCCCATTAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQLKARV*GPISWQ
Trigger: CTGCCAGCTAATGGGCCCCCACACCCTGGCCTTGAG...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCTCAAGGCCAGGGTGTaGGGGCCCATTAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLLKARV*GPISWQ
Trigger: CTGCCAGCTAATGGGCCCCCACACCCTGGCCTTGAG...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGCCCGGTGCAGAAGAGTaGAGCCTCGACGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQPGAEE*SLDGSR
Trigger: TCTGCTGCCGTCGAGGCTTCACTCTTCTGCACCGGG...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGCAGCCCTTTCTCCGGGATaGGGCTCCAAGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KLPTPIVALGCGMCPVPAALSPG*GSKSPP
Trigger: GGGAGGAGACTTGGAGCCTCATCCCGGAGAAAGGGC...TGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCCTTTCCCGCTGCTGCTaGACTGATCCAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQILSRCC*TDPGSP
Trigger: GGGACTCCCTGGATCAGTTCAGCAGCAGCGGGAAAG...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCTTTCCCGCTGCTGCTaGACTGATCCAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLLSRCC*TDPGSP
Trigger: GGGACTCCCTGGATCAGTTCAGCAGCAGCGGGAAAG...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGCCAGCGCTTTCCGGATaGAGCGCGCATATTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQPALSG*SAHIPP
Trigger: TGGCGGAATATGCGCGCTTCATCCGGAAAGCGCTGG...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTAGGAAAGGCAGTTCGTaGCCGTCTGGGGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSRKGSS*PSGDSP
Trigger: GGGGCTGTCCCCAGACGGTCACGAACTGCCTTTCCT...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAAGGAAAGGCAGTTCGTaGCCGTCTGGGGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPRKGSS*PSGDSP
Trigger: GGGGCTGTCCCCAGACGGTCACGAACTGCCTTTCCT...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTTGTCCTGGGCTGGGGTaGAAGGGGACGCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSCPGLG*KGTLAR
Trigger: TCTGGCTAGCGTCCCCTTGCACCCCAGCCCAGGACA...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR GCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGGTCTCCTCCCAGCTCTaGAGCCTGTTGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQVSSQL*SLLETG
Trigger: GCCTGTCTCCAACAGGCTGCAGAGCTGGGAGGAGAC...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGGGGGTCTCCAGGGGTaGCTTGGAGGCGATCACTTC +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLGGLQG*LGGDHF
Trigger: GAAGTGATCGCCTCCAAGGCACCCCTGGAGACCCCC...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGGGGGGTCTCCAGGGGTaGCTTGGAGGCGATCACTTC +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRGGLQG*LGGDHF
Trigger: GAAGTGATCGCCTCCAAGGCACCCCTGGAGACCCCC...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCAGGGCCCGAGGTCTaGTTAGCCAGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLAGPEV*LASCRK
Trigger: CTTCCTGCAGCTGGCTAAGCAGACCTCGGGCCCTGC...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTCCAGCCCCCGGACAGTaGACGGTACACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPPAPGQ*TVHSSS
Trigger: GGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGG...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGCTCGTACAGCGCGAATaGGTTGCGGCTCCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLLVQRE*VAAPGQ
Trigger: TTGGCCCGGAGCCGCAACGCATTCGCGCTGTACGAG...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCACTCGTACAGCGCGAATaGGTTGCGGCTCCGGGCCAA +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPLVQRE*VAAPGQ
Trigger: TTGGCCCGGAGCCGCAACGCATTCGCGCTGTACGAG...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGGAGAGAAGTCCCGCTaGAGGCTCTGCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPGEKSR*RLCRRS
Trigger: GCTGCGCCTGCAGAGCCTGCAGCGGGACTTCTCTCC...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCCCCGACCAGGCTCCGTaGTCAGCTCCAGAACGTCAT +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLPDQAP*SAPERH
Trigger: ATGACGTTCTGGAGCTGAGCACGGAGCCTGGTCGGG...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR GCA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGATGGAGGAGAAGAGCTaGTGCAGGGCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQMEEKS*CRASRG
Trigger: CCCCCGAGAGGCCCTGCAGCAGCTCTTCTCCTCCAT...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGATGGAGGAGAAGAGCTaGTGCAGGGCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQMEEKS*CRASRG
Trigger: CCCCCGAGAGGCCCTGCAGCAGCTCTTCTCCTCCAT...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGATGGAGGAGAAGAGCTaGTGCAGGGCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRMEEKS*CRASRG
Trigger: CCCCCGAGAGGCCCTGCAGCAGCTCTTCTCCTCCAT...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCGCTCAGTCCTGCAGCTaGCCCAAGCAGCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPAQSCS*PKQPDC
Trigger: ACAGTCTGGCTGCTTGGGGCAGCTGCAGGACTGAGC...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCTGGCAGGCTCAGTCCTaGAGCTGCCCCAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVWQAQS*SCPKQP
Trigger: TGGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCA...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGTGGCAGGCTCAGTCCTaGAGCTGCCCCAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQWQAQS*SCPKQP
Trigger: TGGCTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCA...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGGTGCAGCGTCCGAGGTaGGCAGTTGTCCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLVQRPR*AVVQAP
Trigger: TGGAGCTTGGACAACTGCCCACCTCGGACGCTGCAC...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGAGTGTCCAGCCCTGTaGGGGGCAGTGTCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPECPAL*GAVSGA
Trigger: TGCACCGGACACTGCCCCCCACAGGGCTGGACACTC...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGAGGCCCGCTCCTCACTaGCTGAGTCAGCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLRPAPH*LSQRHF
Trigger: GAAGTGACGCTGACTCAGCCAGTGAGGAGCGGGCCT...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGCTCTGCAGCCTGTTaGAGACAGGCCCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPSSAAC*RQARSS
Trigger: TGAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCT...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGCTCTGCAGCCTGTTaGAGACAGGCCCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLSSAAC*RQARSS
Trigger: TGAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCT...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCTCCAGGGGTGCCTTaGAGGCGATCACTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQISPGVP*RRSLPA
Trigger: TGCGGGAAGTGATCGCCTCCAAGGCACCCCTGGAGA...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCTCCAGGGGTGCCTTaGAGGCGATCACTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQSPGVP*RRSLPA
Trigger: TGCGGGAAGTGATCGCCTCCAAGGCACCCCTGGAGA...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGTCCCTGAGCAGTAGCTaGGTGGGGGTCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRSLSSS*VGVSRG
Trigger: ACCCCTGGAGACCCCCACCCAGCTACTGCTCAGGGA...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGTCCCTGAGCAGTAGCTaGGTGGGGGTCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISESLSSS*VGVSRG
Trigger: ACCCCTGGAGACCCCCACCCAGCTACTGCTCAGGGA...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCTGCATAGCCCGGACCTaGGGCGCTGACTCCATAGGG +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVCIART*GADSIG
Trigger: CCCTATGGAGTCAGCGCCCCAGGTCCGGGCTATGCA...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGTGCATAGCCCGGACCTaGGGCGCTGACTCCATAGGG +
Preference number: 4 (lower is better)
Translates to: CALSLQGQKGPCFPQISECIART*GADSIG
Trigger: CCCTATGGAGTCAGCGCCCCAGGTCCGGGCTATGCA...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCACAGTTCGTGACCGTCTaGGGACAGCCCCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAQFVTV*GQPLRV
Trigger: CACCCTGAGGGGCTGTCCCCAGACGGTCACGAACTG...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCACAGTTCGTGACCGTCTaGGGACAGCCCCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPQFVTV*GQPLRV
Trigger: CACCCTGAGGGGCTGTCCCCAGACGGTCACGAACTG...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGCAGGCACAGCTTCTGTaGAGCACCCCGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRQAQLL*STPTRL
Trigger: GAGCCTGGTCGGGGTGCTCCACAGAAGCTGTGCCTG...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGCACAGGCACAGCTTCTGTaGAGCACCCCGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLPTPIVALGCGMCPVPAQAQLL*STPTRL
Trigger: GAGCCTGGTCGGGGTGCTCCACAGAAGCTGTGCCTG...TGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAAGGCCAGGGTGTaGGGGCCCATTAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CGMCPVPAGPKGSMFPSNLKARV*GPISWQ
Trigger: CTGCCAGCTAATGGGCCCCCACACCCTGGCCTTGAG...ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTGTAGCCCTTGGGTGTaGGATGTGCCCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQCSPWV*DVPCPC
Trigger: GCAGGGACAGGGCACATCCCACACCCAAGGGCTACA...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGTGTAGCCCTTGGGTGTaGGATGTGCCCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLCSPWV*DVPCPC
Trigger: GCAGGGACAGGGCACATCCCACACCCAAGGGCTACA...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TGTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCGAGCAGGGGAAAGATaGGGTGGGAGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CGMCPVPAGPKGSMFPSNRAGER*GGRSRR
Trigger: CCTTCTGCTCCTCCCACCTCATCTTTCCCCTGCTCG...ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCGAGCAGGGGAAAGATaGGGTGGGAGGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSRAGER*GGRSRR
Trigger: CCTTCTGCTCCTCCCACCTCATCTTTCCCCTGCTCG...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR TCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTCCCGGTGCAGAAGAGTaGAGCCTCGACGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPPGAEE*SLDGSR
Trigger: TCTGCTGCCGTCGAGGCTTCACTCTTCTGCACCGGG...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCCCTTTCTCCGGGATaGGGCTCCAAGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRALSPG*GSKSPP
Trigger: GGGAGGAGACTTGGAGCCTCATCCCGGAGAAAGGGC...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGCTTTCCCGCTGCTGCTaGACTGATCCAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQLSRCC*TDPGSP
Trigger: GGGACTCCCTGGATCAGTTCAGCAGCAGCGGGAAAG...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGTTTCCTGTATGTCCCTaGGCAGTAGCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLFPVCP*AVAGWG
Trigger: CCCCCACCCAGCTACTGCTCAGGGACATACAGGAAA...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCTTTCCTGTATGTCCCTaGGCAGTAGCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GMCPVPAGPKGSMFPSNLFPVCP*AVAGWG
Trigger: CCCCCACCCAGCTACTGCTCAGGGACATACAGGAAA...GAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCGGTTCCTCAGGTAAATaGGGGCAACGGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LQGQKGPCFPQISEQSWPGSSGK*GQRPLG
Trigger: ACCCAGAGGCCGTTGCCCTCATTTACCTGAGGAACC...GGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGGGTTCCTCAGGTAAATaGGGGCAACGGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQGSSGK*GQRPLG
Trigger: ACCCAGAGGCCGTTGCCCTCATTTACCTGAGGAACC...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGTGCAGCTCATGCAGGTaGGGAGTTGCCAGTACCGCA +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRCSSCR*GVASTA
Trigger: TGCGGTACTGGCAACTCCTCACCTGCATGAGCTGCA...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGCCAGCGCTTTCCGGATaGAGCGCGCATATTCCGCCA +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLPALSG*SAHIPP
Trigger: TGGCGGAATATGCGCGCTTCATCCGGAAAGCGCTGG...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGCATTCACCAGCTGCATaGTCTCTTCCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALSLQGQKGPCFPQISEQHSPAA*SLPPGG
Trigger: GCCCCCAGGTGGAAGAGATCATGCAGCTGGTGAATG...CTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCATTCACCAGCTGCATaGTCTCTTCCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLHSPAA*SLPPGG
Trigger: GCCCCCAGGTGGAAGAGATCATGCAGCTGGTGAATG...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGCAGGAGGGAAGTCGTaGCCTCTTGGCAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPAGGKS*PLGRLS
Trigger: ACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCTGC...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TGTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATGCAGGAGGGAAGTCGTaGCCTCTTGGCAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: CGMCPVPAGPKGSMFPSNAGGKS*PLGRLS
Trigger: ACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCTGC...ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTGCAGGAGGGAAGTCGTaGCCTCTTGGCAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSAGGKS*PLGRLS
Trigger: ACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCTGC...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGAGTTCTCAAACCTGGTaGGCACGTCGGCCACGAGGG +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRSSQTW*ARRPRG
Trigger: CCCTCGTGGCCGACGTGCTCACCAGGTTTGAGAACT...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGGTCTCCTCCCAGCTCTaGAGCCTGTTGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRVSSQL*SLLETG
Trigger: GCCTGTCTCCAACAGGCTGCAGAGCTGGGAGGAGAC...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTATGCAGGTGAGGAGTTaGCAGTACCGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSMQVRS*QYRRAA
Trigger: TGCGGCCCTGCGGTACTGGCAACTCCTCACCTGCAT...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTTTCCGAGTCCGGGAGTaGCTGCTCGGTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSFRVRE*LLGPLQ
Trigger: TTGGAGAGGACCGAGCAGGCACTCCCGGACTCGGAA...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGTTCCGAGTCCGGGAGTaGCTGCTCGGTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLFRVRE*LLGPLQ
Trigger: TTGGAGAGGACCGAGCAGGCACTCCCGGACTCGGAA...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGTTCCGAGTCCGGGAGTaGCTGCTCGGTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQFRVRE*LLGPLQ
Trigger: TTGGAGAGGACCGAGCAGGCACTCCCGGACTCGGAA...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGGTACACAGCAGCTCCTaGCGTTGGCTCAACGCGGAA +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRVHSSS*RWLNAE
Trigger: TTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTAC...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGCCCGACCAGGCTCCGTaGTCAGCTCCAGAACGTCAT +
Preference number: 4 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQPDQAP*SAPERH
Trigger: ATGACGTTCTGGAGCTGAGCACGGAGCCTGGTCGGG...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGAGGCCCGCTCCTCACTaGCTGAGTCAGCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRRPAPH*LSQRHF
Trigger: GAAGTGACGCTGACTCAGCCAGTGAGGAGCGGGCCT...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGAGCTCTGCAGCCTGTTaGAGACAGGCCCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRSSAAC*RQARSS
Trigger: TGAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCT...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCTGGTGTGGGAGTCGATaGCCACAGCACAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVWCGSR*PQHRHQ
Trigger: CTGGTGCCTGTGCTGTGGCCATCGACTCCCACACCA...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGTGGTGTGGGAGTCGATaGCCACAGCACAGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWWCGSR*PQHRHQ
Trigger: CTGGTGCCTGTGCTGTGGCCATCGACTCCCACACCA...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTCAGTTCGTGACCGTCTaGGGACAGCCCCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPQFVTV*GQPLRV
Trigger: CACCCTGAGGGGCTGTCCCCAGACGGTCACGAACTG...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGACAGGCACAGCTTCTGTaGAGCACCCCGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRQAQLL*STPTRL
Trigger: GAGCCTGGTCGGGGTGCTCCACAGAAGCTGTGCCTG...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCTGTAGCCCTTGGGTGTaGGATGTGCCCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVCSPWV*DVPCPC
Trigger: GCAGGGACAGGGCACATCCCACACCCAAGGGCTACA...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGTTTCCTGTATGTCCCTaGGCAGTAGCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLFPVCP*AVAGWG
Trigger: CCCCCACCCAGCTACTGCTCAGGGACATACAGGAAA...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGTGCAGCTCATGCAGGTaGGGAGTTGCCAGTACCGCA +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQCSSCR*GVASTA
Trigger: TGCGGTACTGGCAACTCCTCACCTGCATGAGCTGCA...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGACCAGCGCTTTCCGGATaGAGCGCGCATATTCCGCCA +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRPALSG*SAHIPP
Trigger: TGGCGGAATATGCGCGCTTCATCCGGAAAGCGCTGG...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGGGGTGCAGAGGTCCGTaGAGACGCAGACATAGTCTC +
Preference number: 4 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRGCRGP*RRRHSL
Trigger: GAGACTATGTCTGCGTCTTCACGGACCTCTGCACCC...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCGGGTGCAGAGGTCCGTaGAGACGCAGACATAGTCTC +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVGCRGP*RRRHSL
Trigger: GAGACTATGTCTGCGTCTTCACGGACCTCTGCACCC...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCACGCAGCAGCAGAGCGTaGGCCTGCTCAAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPRSSRA*ACSKRK
Trigger: TTTCCTCTTTGAGCAGGCTCACGCTCTGCTGCTGCG...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCATTCACCAGCTGCATaGTCTCTTCCACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSHSPAA*SLPPGG
Trigger: GCCCCCAGGTGGAAGAGATCATGCAGCTGGTGAATG...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTAGTTCTCAAACCTGGTaGGCACGTCGGCCACGAGGG +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPSSQTW*ARRPRG
Trigger: CCCTCGTGGCCGACGTGCTCACCAGGTTTGAGAACT...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGTCTCCTCCCAGCTCTaGAGCCTGTTGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPVSSQL*SLLETG
Trigger: GCCTGTCTCCAACAGGCTGCAGAGCTGGGAGGAGAC...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTATGCAGGTGAGGAGTTaGCAGTACCGCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPMQVRS*QYRRAA
Trigger: TGCGGCCCTGCGGTACTGGCAACTCCTCACCTGCAT...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGTACACAGCAGCTCCTaGCGTTGGCTCAACGCGGAA +
Preference number: 4 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQVHSSS*RWLNAE
Trigger: TTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTAC...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGCTCAGTCCTGCAGCTaGCCCAAGCAGCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPAQSCS*PKQPDC
Trigger: ACAGTCTGGCTGCTTGGGGCAGCTGCAGGACTGAGC...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGCAGATGTGCCCTGTCCCTaGAGGGCCAAAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: KLPTPIVALGCGMCPVPADVPCP*RAKRVH
Trigger: ATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC...TGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGTGCAGCGTCCGAGGTaGGCAGTTGTCCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRVQRPR*AVVQAP
Trigger: TGGAGCTTGGACAACTGCCCACCTCGGACGCTGCAC...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGAAGTAGTGTCCGTTaGAGTGTCCAGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPGSSVR*SVQPCG
Trigger: CCCACAGGGCTGGACACTCCAACGGACACTACTTCC...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGATCTCCAGGGGTGCCTTaGAGGCGATCACTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRSPGVP*RRSLPA
Trigger: TGCGGGAAGTGATCGCCTCCAAGGCACCCCTGGAGA...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCAAGTCCCGGCAGGTTTaGAGCACACCCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIKSRQV*STPCIK
Trigger: CTTGATGCAGGGTGTGCTCCAAACCTGCCGGGACTT...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGAAGTCCCGGCAGGTTTaGAGCACACCCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: GQKGPCFPQISEQSWPRLKSRQV*STPCIK
Trigger: CTTGATGCAGGGTGTGCTCCAAACCTGCCGGGACTT...CAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGAGCAGCTCCTGCCGTTaGCTCAACGCGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWSSSCR*LNAEIS
Trigger: GGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCT...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAAGCAGCTCCTGCCGTTaGCTCAACGCGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPSSSCR*LNAEIS
Trigger: GGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCT...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGGCTCCGCCCGCCTCTTaGCCAGGCCCGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMAPPAS*PGPGSR
Trigger: TCTGGAGCCCGGGCCTGGCCAAGAGGCGGGCGGAGC...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAATGATCTCTTCCACCTaGGGGCTCTGCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CRAKRVHVSLKSQSSPGPMISST*GLCRRS
Trigger: GCTCCTCCTGCAGAGCCCCCAGGTGGAAGAGATCAT...TGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTATGATCTCTTCCACCTaGGGGCTCTGCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSMISST*GLCRRS
Trigger: GCTCCTCCTGCAGAGCCCCCAGGTGGAAGAGATCAT...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTATGATCTCTTCCACCTaGGGGCTCTGCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSMISST*GLCRRS
Trigger: GCTCCTCCTGCAGAGCCCCCAGGTGGAAGAGATCAT...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCTCTCGGGGGAGGGGTTaGCCAAGTAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVSRGRG*PSRHSP
Trigger: TGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGA...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGTCTCGGGGGAGGGGTTaGCCAAGTAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWSRGRG*PSRHSP
Trigger: TGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGA...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGGGCCCGGGCGCTGGCTaGGAGGGGAGGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMGPGAG*EGRCLA
Trigger: TGCCAGACACCTCCCCTCCCAGCCAGCGCCCGGGCC...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGAAGTCGTGACCTCTTaGCAGGCTCAGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAEVVTS*QAQSCS
Trigger: GCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTC...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp CAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGACCAGACACAGTCACTaGCCACAGACCTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QGQKGPCFPQISEQSWPRTRHSH*PQTCLL
Trigger: AAGGAGACAGGTCTGTGGTCAGTGACTGTGTCTGGT...CCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp GTTGGCCAAGTAGGCATTCACCAGCTGCATGATCTCTTCCACCTGGGGGCTCTGACCAGACACAGTCACTaGCCACAGACCTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGQVGIHQLHDLFHLGALTRHSH*PQTCLL
Trigger: AAGGAGACAGGTCTGTGGTCAGTGACTGTGTCTGGT...CAGAGCCCCCAGGTGGAAGAGATCATGCAGCTGGTGAATGCCTACTTGGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR TCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGATGCAGCTCATGCAGGTaGGGAGTTGCCAGTACCGCA +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRCSSCR*GVASTA
Trigger: TGCGGTACTGGCAACTCCTCACCTGCATGAGCTGCA...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGCTCCTCGCGCAGGGGTaGATAGCCCGGACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMLLAQG*IARTWG
Trigger: GCCCCAGGTCCGGGCTATGCACCCCTGCGCGAGGAG...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCGTCTGCTTAGCCAGCTaGAGGAAGAGTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVVCLAS*RKSSSR
Trigger: CCGGGATGAACTCTTCCTGCAGCTGGCTAAGCAGAC...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGTACACAGCAGCTCCTaGCGTTGGCTCAACGCGGAA +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPVHSSS*RWLNAE
Trigger: TTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTAC...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGTCCCGCTGCAGGCTCTaGAGGCGCAGCGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGSRCRL*RRSAAR
Trigger: CCTGGCGGCGCTGCGCCTGCAGAGCCTGCAGCGGGA...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGATGTGCCCTGTCCCTaGAGGGCCAAAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPDVPCP*RAKRVH
Trigger: ATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGATGTGCCCTGTCCCTaGAGGGCCAAAAGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLRDVPCP*RAKRVH
Trigger: ATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp CCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCAAGTCCCGGCAGGTTTaGAGCACACCCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: PVPAGPKGSMFPSNLRAVKSRQV*STPCIK
Trigger: CTTGATGCAGGGTGTGCTCCAAACCTGCCGGGACTT...GACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGTGTCTGGCAGGTCTTaGCATGGAGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLVSGRS*HGGEEL
Trigger: CAGCTCTTCTCCTCCATGCCAAGACCTGCCAGACAC...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTGTCTGGCAGGTCTTaGCATGGAGGAGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAVSGRS*HGGEEL
Trigger: CAGCTCTTCTCCTCCATGCCAAGACCTGCCAGACAC...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp ATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGAAGTCGTGACCTCTTaGCAGGCTCAGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MCPVPAGPKGSMFPSNLREVVTS*QAQSCS
Trigger: GCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTC...TCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp TGTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATACCCATTGTAGCCCTTaGGTGTGGGATGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CGMCPVPAGPKGSMFPSNTHCSP*VWDVPC
Trigger: ACAGGGCACATCCCACACCCAAGGGCTACAATGGGT...ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAATGTCCGGAGCTaGGAAGTAGTGTCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQSNVRS*EVVSVG
Trigger: TCCAACGGACACTACTTCCCAGCTCCGGACATTGCT...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp AAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTGCAAGCAATGTCCGGAGCTaGGAAGTAGTGTCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: KLPTPIVALGCGMCPVPASNVRS*EVVSVG
Trigger: TCCAACGGACACTACTTCCCAGCTCCGGACATTGCT...TGCAGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGCAGCCAGACTGTCCCTaGGGCTCGTCCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGQPDCP*GSSRPG
Trigger: CCCGGGCCTGGACGAGCCCCAGGGACAGTCTGGCTG...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTCCTGGGCCCCTCGCTaGTCGTACAGCGCGAATGCG +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMSWAPR*SYSANA
Trigger: CGCATTCGCGCTGTACGAGCAGCGAGGGGCCCAGGA...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTCCCCCGCCGTGGTGTaGGAGTCGATGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMSPAVV*ESMATA
Trigger: TGCTGTGGCCATCGACTCCCACACCACGGCGGGGGA...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGCCCGGTGCAGAAGAGTaGAGCCTCGACGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMPGAEE*SLDGSR
Trigger: TCTGCTGCCGTCGAGGCTTCACTCTTCTGCACCGGG...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGCCGCTGCTGCTGAACTaGTCCAGGGAGTCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGPLLLN*SRESRV
Trigger: CACGCGGGACTCCCTGGATCAGTTCAGCAGCAGCGG...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGGGAGAGAAGTCCCGCTaGAGGCTCTGCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGGEKSR*RLCRRS
Trigger: GCTGCGCCTGCAGAGCCTGCAGCGGGACTTCTCTCC...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGGAGGGCAACGGCCTCTaGGTCCCCGCAACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMEGNGL*VPATFL
Trigger: CAGGAAAGTTGCGGGGACCCAGAGGCCGTTGCCCTC...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGAGGAAAGGCAGTTCGTaGCCGTCTGGGGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGRKGSS*PSGDSP
Trigger: GGGGCTGTCCCCAGACGGTCACGAACTGCCTTTCCT...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGCGCAGCAGCAGAGCGTaGGCCTGCTCAAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMRSSRA*ACSKRK
Trigger: TTTCCTCTTTGAGCAGGCTCACGCTCTGCTGCTGCG...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGGCTCAGTCCTGCAGCTaGCCCAAGCAGCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGAQSCS*PKQPDC
Trigger: ACAGTCTGGCTGCTTGGGGCAGCTGCAGGACTGAGC...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGAGCAGCTCCTGCCGTTaGCTCAACGCGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMSSSCR*LNAEIS
Trigger: GGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCT...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGTCTCGGGGGAGGGGTTaGCCAAGTAGGCATTCACCA +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGSRGRG*PSRHSP
Trigger: TGGTGAATGCCTACTTGGCCAACCCCTCCCCCGAGA...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGGAAGTCGTGACCTCTTaGCAGGCTCAGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGEVVTS*QAQSCS
Trigger: GCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTC...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR TCA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGACCAGACACAGTCACTaGCCACAGACCTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMTRHSH*PQTCLL
Trigger: AAGGAGACAGGTCTGTGGTCAGTGACTGTGTCTGGT...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR GCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGGTCTGCTTAGCCAGCTaGAGGAAGAGTTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGVCLAS*RKSSSR
Trigger: CCGGGATGAACTCTTCCTGCAGCTGGCTAAGCAGAC...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CCA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGACCCATTGTAGCCCTTaGGTGTGGGATGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGTHCSP*VWDVPC
Trigger: ACAGGGCACATCCCACACCCAAGGGCTACAATGGGT...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS GCA 90 bp AGGCGGGGCAGGGGCACCCGCGGAGAGAAGTCCCGCTGCAGGCTCTaGAGGCGCAGCGCCGCCAGGGCGCGCAGCGTGTCGTCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RRGRGTRGEKSRCRL*RRSAARARSVSSGG
Trigger: CCCACCCGACGACACGCTGCGCGCCCTGGCGGCGCTGCGCCTGCAGAGCCTGCAGCGGGACTTCTCTCCGCGGGTGCCCCTGCCCCGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS GCA 90 bp AGGCGGTCCAGGCGGGGCAGGGGCACCCGCGGAGAGAAGTCCCGCTaGAGGCTCTGCAGGCGCAGCGCCGCCAGGGCGCGCAGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: RRSRRGRGTRGEKSR*RLCRRSAARARSVS
Trigger: CGACACGCTGCGCGCCCTGGCGGCGCTGCGCCTGCAGAGCCTGCAGCGGGACTTCTCTCCGCGGGTGCCCCTGCCCCGCCTGGACCGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS GCA 90 bp GCGCCGCCAGGGCCAGGTAGGCGGCCATGGCCTCAGCTCGGCCCATaGCCCGTAGCCGCTTCCAGCCGCCCAGCACGGCAGCTGCCGTGC +
Preference number: 5 (lower is better)
Translates to: APPGPGRRPWPQLGP*PVAASSRPARQLPC
Trigger: GCACGGCAGCTGCCGTGCTGGGCGGCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGGCCATGGCCGCCTACCTGGCCCTGGCGGCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp CGCCGAACCCCGGACACTGCGCCGCCAGGGCCAGGTAGGCGGCCATaGCCTCAGCTCGGCCCATGCCCCGTAGCCGCTTCCAGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: RRTPDTAPPGPGRRP*PQLGPCPVAASSRP
Trigger: TGGGCGGCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGGCCATGGCCGCCTACCTGGCCCTGGCGGCGCAGTGTCCGGGGTTCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp TCTCCGCAGCGGGAGCTCTCGCATCTGGCCTCCGCACTTGCGAACTaGGAGCGGAGGGGGACCCAGGCGTTCGAGCCGCCCAGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: SPQRELSHLASALAN*ERRGTQAFEPPSRP
Trigger: AGGCCGGCTGGGCGGCTCGAACGCCTGGGTCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCGCTGCGGAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS TCA 90 bp TCTCCTTACGCCTGCGCTCTGGGCCGGTCACCGAGCACAGGCTGGTaGGCACGAGGCTCCCGAGACGCCGCGCCCCTTTCCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SPYACALGRSPSTGW*ARGSRDAAPLSRCC
Trigger: GCAGCAGCGGGAAAGGGGCGCGGCGTCTCGGGAGCCTCGTGCTCACCAGCCTGTGCTCGGTGACCGGCCCAGAGCGCAGGCGTAAGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
ENST00000591544.1
ENST00000592974.5
CDS GCA 90 bp GTCCAGGTCTCCGCAGCGGGAGCTCTCGCATCTGGCCTCCGCACTTaGGAACTGGGAGCGGAGGGGGACCCAGGCGTTCGAGCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: VQVSAAGALASGLRT*ELGAEGDPGVRAAQ
Trigger: CTGGGCGGCTCGAACGCCTGGGTCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCGCTGCGGAGACCTGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS CCA 90 bp TGCAGGAAGAGTTCATCCCGGAGCGCGGGCAAGTCCCGGCAGGTTTaGAGCACACCCTGCATCAAGGGCCCGGGGCGCCGCGCCCCCTCC +
Preference number: 5 (lower is better)
Translates to: CRKSSSRSAGKSRQV*STPCIKGPGRRAPS
Trigger: GGAGGGGGCGCGGCGCCCCGGGCCCTTGATGCAGGGTGTGCTCCAAACCTGCCGGGACTTGCCCGCGCTCCGGGATGAACTCTTCCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS TCA 90 bp ACGAGGCTCCCGAGACGCCGCGCCCCTTTCCCGCTGCTGCTGAACTaGTCCAGGGAGTCCCGCGTGAGCACAAACCAGGCTCGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: TRLPRRRAPFPLLLN*SRESRVSTNQARRG
Trigger: CCCGCGCCGAGCCTGGTTTGTGCTCACGCGGGACTCCCTGGATCAGTTCAGCAGCAGCGGGAAAGGGGCGCGGCGTCTCGGGAGCCTCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000587627.1
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
ENST00000591544.1
ENST00000592974.5
CDS CCA 90 bp CTCCTCCCAGCTCTGCAGCCTGTTGGAGACAGGCCCGCTCCTCACTaGCTGAGTCAGCGTCACTTCCAGGGGACCCCTCCCGCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: LLPALQPVGDRPAPH*LSQRHFQGTPPAAR
Trigger: GCGGGCGGCGGGAGGGGTCCCCTGGAAGTGACGCTGACTCAGCCAGTGAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCTGGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp ACTTCTCCCCCTCGTCCAGGTCTCCGCAGCGGGAGCTCTCGCATCTaGCCTCCGCACTTGCGAACTGGGAGCGGAGGGGGACCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: TSPPRPGLRSGSSRI*PPHLRTGSGGGPRR
Trigger: ACGCCTGGGTCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCGCTGCGGAGACCTGGACGAGGGGGAGAAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS TCA 90 bp AGGGCACCAGCTCTCTGCCGCGCGTCCGGCCCAGCGCTTTCCGGATaGAGCGCGCATATTCCGCCAGTTCCGAGTCCGGGAGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: RAPALCRASGPALSG*SAHIPPVPSPGVPA
Trigger: AGCAGGCACTCCCGGACTCGGAACTGGCGGAATATGCGCGCTTCATCCGGAAAGCGCTGGGCCGGACGCGCGGCAGAGAGCTGGTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS TCA 90 bp GGGTGTGGGGGCCCATTAGCTGGCAGGCGGCCACATGGCCATAGCTaGCACTGTGGATGGGCTCCGTCTCCCCTGGCCGGGAGAGGGACA +
Preference number: 5 (lower is better)
Translates to: GCGGPLAGRRPHGHS*HCGWAPSPLAGRGT
Trigger: TGTCCCTCTCCCGGCCAGGGGAGACGGAGCCCATCCACAGTGTCAGCTATGGCCATGTGGCCGCCTGCCAGCTAATGGGCCCCCACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591476.5
ENST00000591490.5
CDS GCA 90 bp ACAGCTCCCCCAGGTCGGAAGGTGCAGCTCATGCAGGTGAGGAGTTaGCAGTACCGCAGGGCCGCAGGGTCTTGGGTAGCCGGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: TAPPGRKVQLMQVRS*QYRRAAGSWVAGSP
Trigger: CGGGCTCCCGGCTACCCAAGACCCTGCGGCCCTGCGGTACTGGCAACTCCTCACCTGCATGAGCTGCACCTTCCGACCTGGGGGAGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS GCA 90 bp GCACAGGCACCAGCCCCCGGACAGTGCACGGTACACAGCAGCTCCTaGCGTTGGCTCAACGCGGAAATCTCCGCCAGCGAGGGCACCAGC +
Preference number: 5 (lower is better)
Translates to: AQAPAPGQCTVHSSS*RWLNAEISASEGTS
Trigger: GCTGGTGCCCTCGCTGGCGGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGGTGCCTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp GCACCAGCCCCCGGACAGTGCACGGTACACAGCAGCTCCTGCCGTTaGCTCAACGCGGAAATCTCCGCCAGCGAGGGCACCAGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: APAPGQCTVHSSSCR*LNAEISASEGTSSL
Trigger: CAGAGAGCTGGTGCCCTCGCTGGCGGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp GGCCACATGGCCATAGCTGACACTGTGGATGGGCTCCGTCTCCCCTaGCCGGGAGAGGGACATGGCCTTGGCTCCCAAGCCCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: GHMAIADTVDGLRLP*PGEGHGLGSQAQAQ
Trigger: CTGTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGCCAGGGGAGACGGAGCCCATCCACAGTGTCAGCTATGGCCATGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591476.5
ENST00000591490.5
CDS CCA 90 bp CGGAGGAACTGGCGGGGCTCCGACCCGAGCAGGGGAAAGATGAGGTaGGAGGAGCAGAAGGGAGAAGAGGACAGGGAGGAGGCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: RRNWRGSDPSRGKMR*EEQKGEEDREEAVS
Trigger: GGACACTGCCTCCTCCCTGTCCTCTTCTCCCTTCTGCTCCTCCCACCTCATCTTTCCCCTGCTCGGGTCGGAGCCCCGCCAGTTCCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000587627.1
ENST00000591022.6
ENST00000591490.5
CDS CCA 90 bp CTCCTCCCAGCTCTGCAGCCTGTTGGAGACAGGCCCGCTCCTCACTaGCTGAGTCAGCGTCACTTCCAGGGGACCCTCCCTCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LLPALQPVGDRPAPH*LSQRHFQGTLPLLG
Trigger: CCCAAGGAGAGGGAGGGTCCCCTGGAAGTGACGCTGACTCAGCCAGTGAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCTGGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456950.6
CDS GCA 90 bp GTGTGGGAGTCGATGGCCACAGCACAGGCACCAGCCCCCGGACAGTaGACGGTACACAGCAGCTCCTGCCGTTGGCTCAACGCGGAAATC +
Preference number: 5 (lower is better)
Translates to: VWESMATAQAPAPGQ*TVHSSSCRWLNAEI
Trigger: GATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGGTGCCTGTGCTGTGGCCATCGACTCCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp GGAGAGGGACATGGCCTTGGCTCCCAAGCCCAGGCACAGCTTCTGTaGAGCACCCCGACCAGGCTCCTGCAGACAGAGAGGCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: GEGHGLGSQAQAQLL*STPTRLLQTERQSQ
Trigger: CTGACTCTGCCTCTCTGTCTGCAGGAGCCTGGTCGGGGTGCTCCACAGAAGCTGTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591476.5
ENST00000591490.5
CDS CCA 90 bp CTCCTCCCAGCTCTGCAGCCTGTTGGAGACAGGCCCGCTCCTCACTaGCTGAGTCAGCGTCACTTCCAGGGGACCCCCAATCCTGGGATG +
Preference number: 5 (lower is better)
Translates to: LLPALQPVGDRPAPH*LSQRHFQGTPNPGM
Trigger: CATCCCAGGATTGGGGGTCCCCTGGAAGTGACGCTGACTCAGCCAGTGAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCTGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591544.1
CDS-3UTR CAA 90 bp AGGAGGGAAGTCGTGACCTCTTGGCAGGCTCAGTCCTGCAGCTGCCCCAAGCAGCAGCTCTGCAGCCTGTaGGAGACAGGCCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RREVVTSWQAQSCSCPKQQLCSL*ETGPLL
Trigger: GAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCTG...CTGCTTGGGGCAGCTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS TCA 90 bp TCACAACGATGTCCGGGTCGTCCTCCGGCAGCCCTTTCTCCGGGATaGGGCTCCAAGTCTCCTCCCAGCTCTGCAGCCTGTTGGAGACAG +
Preference number: 5 (lower is better)
Translates to: SQRCPGRPPAALSPG*GSKSPPSSAACWRQ
Trigger: CTGTCTCCAACAGGCTGCAGAGCTGGGAGGAGACTTGGAGCCTCATCCCGGAGAAAGGGCTGCCGGAGGACGACCCGGACATCGTTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000587627.1
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
ENST00000591544.1
ENST00000592974.5
CDS CCA 90 bp ATAGCCCGGACCTGGGGCGCTGACTCCATAGGGCAGGGGCAGGAGTaGGGCATACAAGGCTCCACTAGTGTGTCTCAGAATCGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: IARTWGADSIGQGQE*GIQGSTSVSQNRVP
Trigger: AGGAACCCGATTCTGAGACACACTAGTGGAGCCTTGTATGCCCCACTCCTGCCCCTGCCCTATGGAGTCAGCGCCCCAGGTCCGGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp CAGAGCGTGAGCCTGCTCAAAGAGGAAAGGCAGTTCGTGACCGTCTaGGGACAGCCCCTCAGGGTGCAGAGGTCCGTGAAGACGCAGACA +
Preference number: 5 (lower is better)
Translates to: QSVSLLKEERQFVTV*GQPLRVQRSVKTQT
Trigger: TGTCTGCGTCTTCACGGACCTCTGCACCCTGAGGGGCTGTCCCCAGACGGTCACGAACTGCCTTTCCTCTTTGAGCAGGCTCACGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 90 bp GTGTCTCAGAATCGGGTTCCTCAGGTAAATGAGGGCAACGGCCTCTaGGTCCCCGCAACTTTCCTAGGGGGCCAGGGAGAGGGTCACCTG +
Preference number: 5 (lower is better)
Translates to: VSQNRVPQVNEGNGL*VPATFLGGQGEGHL
Trigger: CAGGTGACCCTCTCCCTGGCCCCCTAGGAAAGTTGCGGGGACCCAGAGGCCGTTGCCCTCATTTACCTGAGGAACCCGATTCTGAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592974.5
CDS-3UTR CAA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCGTCTCCAGGGGTGCCTaGGAGGCGATCACTTCCCGC +
Preference number: 5 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIVSRGA*EAITSR
Trigger: GCGGGAAGTGATCGCCTCCAAGGCACCCCTGGAGAC...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCCATGCAGGTGAGGAGTaGCCAGTACCGCAGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIHAGEE*PVPQGR
Trigger: GCGGCCCTGCGGTACTGGCAACTCCTCACCTGCATG...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp GTTGGCCAAGTAGGCATTCACCAGCTGCATGATCTCTTCCACCTGGGGGCTCTGCATGCAGGTGAGGAGTaGCCAGTACCGCAGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VGQVGIHQLHDLFHLGALHAGEE*PVPQGR
Trigger: GCGGCCCTGCGGTACTGGCAACTCCTCACCTGCATG...CAGAGCCCCCAGGTGGAAGAGATCATGCAGCTGGTGAATGCCTACTTGGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591196.5
CDS-3UTR CAA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCATACAGCGCGAATGCGTaGCGGCTCCGGGCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAYSANA*RLRAKP
Trigger: GGGCTTGGCCCGGAGCCGCAACGCATTCGCGCTGTA...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTTACAGCGCGAATGCGTaGCGGCTCCGGGCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSYSANA*RLRAKP
Trigger: GGGCTTGGCCCGGAGCCGCAACGCATTCGCGCTGTA...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTGTCCGAGGTGGGCAGTaGTCCAAGCTCCAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: WDVPCPCRAKRVHVSLKSVRGGQ*SKLQGG
Trigger: CCCTCCCTGGAGCTTGGACAACTGCCCACCTCGGAC...AGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CAA 90 bp GTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGCAGCTCTGCAGCCTGTaGGAGACAGGCCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VPAGPKGSMFPSNLRAVLQLCSL*ETGPLL
Trigger: GAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCTG...CAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp GATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGGTCTCCAGGGGTGCCTaGGAGGCGATCACTTCCCGC +
Preference number: 5 (lower is better)
Translates to: DVPCPCRAKRVHVSLKSQVSRGA*EAITSR
Trigger: GCGGGAAGTGATCGCCTCCAAGGCACCCCTGGAGAC...CTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCTCCAGGGGTGCCTaGGAGGCGATCACTTCCCGC +
Preference number: 5 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAVSRGA*EAITSR
Trigger: GCGGGAAGTGATCGCCTCCAAGGCACCCCTGGAGAC...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TGTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATGAGAGGGACATGGCCTaGGCTCCCAAGCCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: CGMCPVPAGPKGSMFPSNERDMA*APKPRH
Trigger: GTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTC...ATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGGAGAGGGACATGGCCTaGGCTCCCAAGCCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWERDMA*APKPRH
Trigger: GTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTC...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGGAGAGGGACATGGCCTaGGCTCCCAAGCCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: CALSLQGQKGPCFPQISEERDMA*APKPRH
Trigger: GTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTC...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS CCA 90 bp CAGGGATGTGAGGGCCCAAGGGCTGGTGACTCCTGGGGTTTGAGATaGGTAGCTGTTCTGGATGTGGGGAATTACGTGACACTCCGTGGG +
Preference number: 5 (lower is better)
Translates to: QGCEGPRAGDSWGLR*VAVLDVGNYVTLRG
Trigger: CCCACGGAGTGTCACGTAATTCCCCACATCCAGAACAGCTACCCATCTCAAACCCCAGGAGTCACCAGCCCTTGGGCCCTCACATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591490.5
CDS-3UTR CAA 90 bp AGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGTGCCCTGTCCCTCAGCTCTGCAGCCTGTaGGAGACAGGCCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RKLPTPIVALGCGMCPVPQLCSL*ETGPLL
Trigger: GAGGAGCGGGCCTGTCTCCAACAGGCTGCAGAGCTG...AGGGACAGGGCACATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp GTGGGATGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCCAGCAGCTCCTGCCGTaGGCTCAACGCGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: VGCALSLQGQKGPCFPQIQQLLP*AQRGNL
Trigger: GAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTG...GATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACATCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGCAGCTCCTGCCGTaGGCTCAACGCGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: CALSLQGQKGPCFPQISEQQLLP*AQRGNL
Trigger: GAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTG...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCACAGCAGCTCCTGCCGTaGGCTCAACGCGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: CPVPAGPKGSMFPSNLRAQQLLP*AQRGNL
Trigger: GAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTG...TGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp CAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGGAAGTCGTGACCTCTaGGCAGGCTCAGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QKGPCFPQISEQSWPRLQGSRDL*AGSVLQ
Trigger: CTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCC...CTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp CCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTGGAAGTCGTGACCTCTaGGCAGGCTCAGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PCPCRAKRVHVSLKSQSSGSRDL*AGSVLQ
Trigger: CTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCC...ACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TGTGCCCTGTCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGGGAAGTCGTGACCTCTaGGCAGGCTCAGTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: CALSLQGQKGPCFPQISEGSRDL*AGSVLQ
Trigger: CTGCAGGACTGAGCCTGCCAAGAGGTCACGACTTCC...CTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGACAGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp AAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGCCCAGGCTGCAGGGGTGTCTGGCAGGTCTaGGCATGGAGGAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: KRVHVSLKSQSSPGPGCRGVWQV*AWRRRA
Trigger: AGCTCTTCTCCTCCATGCCAAGACCTGCCAGACACC...CCTGCAGCCTGGGCCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp TCCCTGCAGGGCCAAAAGGGTCCATGTTTCCCTCAAATCTCAGAGCAGTCCTGGGGTGTCTGGCAGGTCTaGGCATGGAGGAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SLQGQKGPCFPQISEQSWGVWQV*AWRRRA
Trigger: AGCTCTTCTCCTCCATGCCAAGACCTGCCAGACACC...CCAGGACTGCTCTGAGATTTGAGGGAAACATGGACCCTTTTGGCCCTGCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp AAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGATGGTCCGAGGTGGGCAGTaGTCCAAGCTCCAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: KKQTRKLPTPIVALGCGMVRGGQ*SKLQGG
Trigger: CCCTCCCTGGAGCTTGGACAACTGCCCACCTCGGAC...CATCCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293349.10
ENST00000591022.6
CDS-3UTR CAA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGCATGCAGGTGAGGAGTaGCCAGTACCGCAGGGCCGC +
Preference number: 5 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGHAGEE*PVPQGR
Trigger: GCGGCCCTGCGGTACTGGCAACTCCTCACCTGCATG...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS-3UTR CAA 90 bp ATTAAGAAACAAACTAGAAAATTACCCACACCCATTGTAGCCCTTGGGTGTGGGGGTGTCTGGCAGGTCTaGGCATGGAGGAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: IKKQTRKLPTPIVALGCGGVWQV*AWRRRA
Trigger: AGCTCTTCTCCTCCATGCCAAGACCTGCCAGACACC...CCCACACCCAAGGGCTACAATGGGTGTGGGTAATTTTCTAGTTTGTTTCTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
CDS TCA 90 bp GCATTTCTCACTGTCTTCATAGCCTGGGATTCCTTGTTTATTGTCTaGCTCCACTCTAGTGTAAGCTCCTTCAGCTTGTCTGTGATCACT +
Preference number: 5 (lower is better)
Translates to: AFLTVFIAWDSLFIV*LHSSVSSFSLSVIT
Trigger: AGTGATCACAGACAAGCTGAAGGAGCTTACACTAGAGTGGAGTCAGACAATAAACAAGGAATCCCAGGCTATGAAGACAGTGAGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591490.5
CDS GCA 72 bp AGGGGCACCCGCGGAGAGAAGTCCCGCTGCAGGCTCTaGAGGCGCAGCGCCGCCAGGGCGCGCAGCGTGTCG +
Preference number: 6 (lower is better)
Translates to: RGTRGEKSRCRL*RRSAARARSVS
Trigger: CGACACGCTGCGCGCCCTGGCGGCGCTGCGCCTGCAGAGCCTGCAGCGGGACTTCTCTCCGCGGGTGCCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS GCA 72 bp AGCGCGGGCAAGTCCCGGCAGGTTTGGAGCACACCCTaGATCAAGGGCCCGGGGCGCCGCGCCCCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SAGKSRQVWSTP*IKGPGRRAPSS
Trigger: GCTGGAGGGGGCGCGGCGCCCCGGGCCCTTGATGCAGGGTGTGCTCCAAACCTGCCGGGACTTGCCCGCGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS GCA 72 bp GGGCCAGGTAGGCGGCCATGGCCTCAGCTCGGCCCATaGCCCGTAGCCGCTTCCAGCCGCCCAGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: GPGRRPWPQLGP*PVAASSRPARQ
Trigger: CTGCCGTGCTGGGCGGCTGGAAGCGGCTACGGGGCATGGGCCGAGCTGAGGCCATGGCCGCCTACCTGGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp CCGGACACTGCGCCGCCAGGGCCAGGTAGGCGGCCATaGCCTCAGCTCGGCCCATGCCCCGTAGCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: PDTAPPGPGRRP*PQLGPCPVAAS
Trigger: GGAAGCGGCTACGGGGCATGGGCCGAGCTGAGGCCATGGCCGCCTACCTGGCCCTGGCGGCGCAGTGTCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS TCA 72 bp GCCTGCGCTCTGGGCCGGTCACCGAGCACAGGCTGGTaGGCACGAGGCTCCCGAGACGCCGCGCCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: ACALGRSPSTGW*ARGSRDAAPLS
Trigger: GGAAAGGGGCGCGGCGTCTCGGGAGCCTCGTGCTCACCAGCCTGTGCTCGGTGACCGGCCCAGAGCGCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000587627.1
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
ENST00000591544.1
ENST00000592974.5
CDS GCA 72 bp TCGCTCCTGGGCCCCTCGCTGCTCGTACAGCGCGAATaGGTTGCGGCTCCGGGCCAAGCCCAGCCGCCCCAC +
Preference number: 6 (lower is better)
Translates to: SLLGPSLLVQRE*VAAPGQAQPPH
Trigger: GTGGGGCGGCTGGGCTTGGCCCGGAGCCGCAACGCATTCGCGCTGTACGAGCAGCGAGGGGCCCAGGAGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp CCCACCAGCTCTCGAGCCACCTCCCCCGCCGTGGTGTaGGAGTCGATGGCCACAGCACAGGCACCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: PTSSRATSPAVV*ESMATAQAPAP
Trigger: GGGGGCTGGTGCCTGTGCTGTGGCCATCGACTCCCACACCACGGCGGGGGAGGTGGCTCGAGAGCTGGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp CGGGAGCTCTCGCATCTGGCCTCCGCACTTGCGAACTaGGAGCGGAGGGGGACCCAGGCGTTCGAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: RELSHLASALAN*ERRGTQAFEPP
Trigger: GGGCGGCTCGAACGCCTGGGTCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS CAA 90 bp CGTCCAGGTCTCCGCAGCGGGAGCTCTCGCATCTGGCCTCCGCACTaGCGAACTGGGAGCGGAGGGGGACCCAGGCGTTCGAGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: RPGLRSGSSRIWPPH*RTGSGGGPRRSSRP
Trigger: TGGGCGGCTCGAACGCCTGGGTCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCGCTGCGGAGACCTGGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS GCA 72 bp CGCCAAGAACAGCCGCACCGCCTCCTCGCGCAGGGGTaGATAGCCCGGACCTGGGGCGCTGACTCCATAGGG +
Preference number: 6 (lower is better)
Translates to: RQEQPHRLLAQG*IARTWGADSIG
Trigger: CCCTATGGAGTCAGCGCCCCAGGTCCGGGCTATGCACCCCTGCGCGAGGAGGCGGTGCGGCTGTTCTTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp AGTTCATCCCGGAGCGCGGGCAAGTCCCGGCAGGTTTaGAGCACACCCTGCATCAAGGGCCCGGGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: SSSRSAGKSRQV*STPCIKGPGRR
Trigger: GCGGCGCCCCGGGCCCTTGATGCAGGGTGTGCTCCAAACCTGCCGGGACTTGCCCGCGCTCCGGGATGAACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CAA 72 bp CTCCGCAGCGGGAGCTCTCGCATCTGGCCTCCGCACTaGCGAACTGGGAGCGGAGGGGGACCCAGGCGTTCG +
Preference number: 6 (lower is better)
Translates to: LRSGSSRIWPPH*RTGSGGGPRRS
Trigger: CGAACGCCTGGGTCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCGCTGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS GCA 72 bp TCCGCAGCGGGAGCTCTCGCATCTGGCCTCCGCACTTaGGAACTGGGAGCGGAGGGGGACCCAGGCGTTCGA +
Preference number: 6 (lower is better)
Translates to: SAAGALASGLRT*ELGAEGDPGVR
Trigger: TCGAACGCCTGGGTCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCGCTGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS CCA 72 bp CCTCGTCCAGGTCTCCGCAGCGGGAGCTCTCGCATCTaGCCTCCGCACTTGCGAACTGGGAGCGGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: PRPGLRSGSSRI*PPHLRTGSGGG
Trigger: TCCCCCTCCGCTCCCAGTTCGCAAGTGCGGAGGCCAGATGCGAGAGCTCCCGCTGCGGAGACCTGGACGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456950.6
ENST00000591544.1
CDS CAA 72 bp GGGGGCAGTGTCCGGTGCAGCGTCCGAGGTGGGCAGTaGTCCAAGCTCCAGGGAGGGTCGTGTCCGGTAGGG +
Preference number: 6 (lower is better)
Translates to: GGSVRCSVRGGQ*SKLQGGSCPVG
Trigger: CCCTACCGGACACGACCCTCCCTGGAGCTTGGACAACTGCCCACCTCGGACGCTGCACCGGACACTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293349.10
ENST00000587627.1
ENST00000591022.6
CDS CAA 90 bp CACAGCTCCCCCAGGTCGGAAGGTGCAGCTCATGCAGGTGAGGAGTaGCCAGTACCGCAGGGCCGCAGGGTCTTGGGTAGCCGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: HSSPRSEGAAHAGEE*PVPQGRRVLGSREP
Trigger: GGGCTCCCGGCTACCCAAGACCCTGCGGCCCTGCGGTACTGGCAACTCCTCACCTGCATGAGCTGCACCTTCCGACCTGGGGGAGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CAA 90 bp CTGTGGATGGGCTCCGTCTCCCCTGGCCGGGAGAGGGACATGGCCTaGGCTCCCAAGCCCAGGCACAGCTTCTGTGGAGCACCCCGACCA +
Preference number: 6 (lower is better)
Translates to: LWMGSVSPGRERDMA*APKPRHSFCGAPRP
Trigger: TGGTCGGGGTGCTCCACAGAAGCTGTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGCCAGGGGAGACGGAGCCCATCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591476.5
ENST00000591490.5
CDS TCA 72 bp GCTCTCTGCCGCGCGTCCGGCCCAGCGCTTTCCGGATaGAGCGCGCATATTCCGCCAGTTCCGAGTCCGGGA +
Preference number: 6 (lower is better)
Translates to: ALCRASGPALSG*SAHIPPVPSPG
Trigger: TCCCGGACTCGGAACTGGCGGAATATGCGCGCTTCATCCGGAAAGCGCTGGGCCGGACGCGCGGCAGAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS TCA 72 bp GGCCCATTAGCTGGCAGGCGGCCACATGGCCATAGCTaGCACTGTGGATGGGCTCCGTCTCCCCTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GPLAGRRPHGHS*HCGWAPSPLAG
Trigger: CCCGGCCAGGGGAGACGGAGCCCATCCACAGTGTCAGCTATGGCCATGTGGCCGCCTGCCAGCTAATGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591476.5
ENST00000591490.5
CDS CCA 72 bp GGATGGGCTCCGTCTCCCCTGGCCGGGAGAGGGACATaGCCTTGGCTCCCAAGCCCAGGCACAGCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: GWAPSPLAGRGT*PWLPSPGTASV
Trigger: CACAGAAGCTGTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGCCAGGGGAGACGGAGCCCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591476.5
ENST00000591490.5
CDS CAA 72 bp GGCTCCGTCTCCCCTGGCCGGGAGAGGGACATGGCCTaGGCTCCCAAGCCCAGGCACAGCTTCTGTGGAGCA +
Preference number: 6 (lower is better)
Translates to: GSVSPGRERDMA*APKPRHSFCGA
Trigger: TGCTCCACAGAAGCTGTGCCTGGGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGCCAGGGGAGACGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591476.5
ENST00000591490.5
CDS CAA 90 bp GGCACCAGCCCCCGGACAGTGCACGGTACACAGCAGCTCCTGCCGTaGGCTCAACGCGGAAATCTCCGCCAGCGAGGGCACCAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: GTSPRTVHGTQQLLP*AQRGNLRQRGHQLS
Trigger: AGAGAGCTGGTGCCCTCGCTGGCGGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS TCA 72 bp CCGTCTGGGGACAGCCCCTCAGGGTGCAGAGGTCCGTaGAGACGCAGACATAGTCTCCACCCGGAGTCGGGC +
Preference number: 6 (lower is better)
Translates to: PSGDSPSGCRGP*RRRHSLHPESG
Trigger: GCCCGACTCCGGGTGGAGACTATGTCTGCGTCTTCACGGACCTCTGCACCCTGAGGGGCTGTCCCCAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS GCA 72 bp CCAGCCCCCGGACAGTGCACGGTACACAGCAGCTCCTaGCGTTGGCTCAACGCGGAAATCTCCGCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: PAPGQCTVHSSS*RWLNAEISASE
Trigger: CTCGCTGGCGGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp CCCGGACAGTGCACGGTACACAGCAGCTCCTGCCGTTaGCTCAACGCGGAAATCTCCGCCAGCGAGGGCACC +
Preference number: 6 (lower is better)
Translates to: PGQCTVHSSSCR*LNAEISASEGT
Trigger: GGTGCCCTCGCTGGCGGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp GCCATAGCTGACACTGTGGATGGGCTCCGTCTCCCCTaGCCGGGAGAGGGACATGGCCTTGGCTCCCAAGCC +
Preference number: 6 (lower is better)
Translates to: AIADTVDGLRLP*PGEGHGLGSQA
Trigger: GGCTTGGGAGCCAAGGCCATGTCCCTCTCCCGGCCAGGGGAGACGGAGCCCATCCACAGTGTCAGCTATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591476.5
ENST00000591490.5
CDS CAA 72 bp CCCCGGACAGTGCACGGTACACAGCAGCTCCTGCCGTaGGCTCAACGCGGAAATCTCCGCCAGCGAGGGCAC +
Preference number: 6 (lower is better)
Translates to: PRTVHGTQQLLP*AQRGNLRQRGH
Trigger: GTGCCCTCGCTGGCGGAGATTTCCGCGTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS TCA 72 bp TGTCCGGGTCGTCCTCCGGCAGCCCTTTCTCCGGGATaGGGCTCCAAGTCTCCTCCCAGCTCTGCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: CPGRPPAALSPG*GSKSPPSSAAC
Trigger: ACAGGCTGCAGAGCTGGGAGGAGACTTGGAGCCTCATCCCGGAGAAAGGGCTGCCGGAGGACGACCCGGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000587627.1
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
ENST00000591544.1
ENST00000592974.5
CDS GCA 72 bp GAAGCGCGCATATTCCGCCAGTTCCGAGTCCGGGAGTaGCTGCTCGGTCCTCTCCAAGTGCCCCAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: EARIFRQFRVRE*LLGPLQVPQEV
Trigger: CACCTCCTGGGGCACTTGGAGAGGACCGAGCAGGCACTCCCGGACTCGGAACTGGCGGAATATGCGCGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS GCA 72 bp TCGATGGCCACAGCACAGGCACCAGCCCCCGGACAGTaGACGGTACACAGCAGCTCCTGCCGTTGGCTCAAC +
Preference number: 6 (lower is better)
Translates to: SMATAQAPAPGQ*TVHSSSCRWLN
Trigger: GTTGAGCCAACGGCAGGAGCTGCTGTGTACCGTGCACTGTCCGGGGGCTGGTGCCTGTGCTGTGGCCATCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp CAGGGCCCCGGGAGAGGAGGGAGCAATGTCCGGAGCTaGGAAGTAGTGTCCGTTGGAGTGTCCAGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: QGPGRGGSNVRS*EVVSVGVSSPV
Trigger: CACAGGGCTGGACACTCCAACGGACACTACTTCCCAGCTCCGGACATTGCTCCCTCCTCTCCCGGGGCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293349.10
ENST00000587627.1
ENST00000591022.6
ENST00000591490.5
CDS CCA 72 bp AGGGAGAGGGTCACCTGTATGTCCCTGAGCAGTAGCTaGGTGGGGGTCTCCAGGGGTGCCTTGGAGGCGATC +
Preference number: 6 (lower is better)
Translates to: RERVTCMSLSSS*VGVSRGALEAI
Trigger: GATCGCCTCCAAGGCACCCCTGGAGACCCCCACCCAGCTACTGCTCAGGGACATACAGGTGACCCTCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592974.5
CDS CCA 72 bp AGCCTGCTCAAAGAGGAAAGGCAGTTCGTGACCGTCTaGGGACAGCCCCTCAGGGTGCAGAGGTCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: SLLKEERQFVTV*GQPLRVQRSVK
Trigger: CTTCACGGACCTCTGCACCCTGAGGGGCTGTCCCCAGACGGTCACGAACTGCCTTTCCTCTTTGAGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CCA 72 bp AATCGGGTTCCTCAGGTAAATGAGGGCAACGGCCTCTaGGTCCCCGCAACTTTCCTAGGGGGCCAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: NRVPQVNEGNGL*VPATFLGGQGE
Trigger: CTCTCCCTGGCCCCCTAGGAAAGTTGCGGGGACCCAGAGGCCGTTGCCCTCATTTACCTGAGGAACCCGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592974.5
CDS GCA 72 bp GCTCTAGGGCTCCAGCTTCCCCACCAGGGTCCTACGTaGTCTGGCCCTGCAACCTTTCCTTCCTTATCACCA +
Preference number: 6 (lower is better)
Translates to: ALGLQLPHQGPT*SGPATFPSLSP
Trigger: TGGTGATAAGGAAGGAAAGGTTGCAGGGCCAGAGCACGTAGGACCCTGGTGGGGAAGCTGGAGCCCTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591490.5
CDS CCA 72 bp AATCGGGTTCCTCAGGTAAATGAGGGCAACGGCCTCTaGGTCCCCGCAACTTTCCTGTATGTCCCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: NRVPQVNEGNGL*VPATFLYVPEQ
Trigger: CTGCTCAGGGACATACAGGAAAGTTGCGGGGACCCAGAGGCCGTTGCCCTCATTTACCTGAGGAACCCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293349.10
ENST00000456950.6
ENST00000591022.6
ENST00000591196.5
ENST00000591490.5
CDS CAA 72 bp GGATGTGAGGGCCCAAGGGCTGGTGACTCCTGGGGTTaGAGATGGGTAGCTGTTCTGGATGTGGGGAATTAC +
Preference number: 6 (lower is better)
Translates to: GCEGPRAGDSWG*RWVAVLDVGNY
Trigger: GTAATTCCCCACATCCAGAACAGCTACCCATCTCAAACCCCAGGAGTCACCAGCCCTTGGGCCCTCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591490.5
CDS GCA 72 bp AGAGCTCTACCTGGCCCAGGTTTGGTGTTCTGTAAATaGTTCCTGACATCGCTTCCCTTCTCTCCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: RALPGPGLVFCK*FLTSLPFSPPP
Trigger: GGGAGGAGGAGAGAAGGGAAGCGATGTCAGGAAGCATTTACAGAACACCAAACCTGGGCCAGGTAGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591490.5
CDS GCA 72 bp AGCCACCGCGGCCGGCTTCTCTCCTTCATTTCTATGTaGCAGTTATACTTGGTTCTTTCTGCTCTTCTAACA +
Preference number: 6 (lower is better)
Translates to: SHRGRLLSFISM*QLYLVLSALLT
Trigger: TGTTAGAAGAGCAGAAAGAACCAAGTATAACTGGCACATAGAAATGAAGGAGAGAAGCCGGCCGCGGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591490.5
CDS TCA 72 bp ACTGTCTTCATAGCCTGGGATTCCTTGTTTATTGTCTaGCTCCACTCTAGTGTAAGCTCCTTCAGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: TVFIAWDSLFIV*LHSSVSSFSLS
Trigger: AGACAAGCTGAAGGAGCTTACACTAGAGTGGAGTCAGACAATAAACAAGGAATCCCAGGCTATGAAGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591490.5