RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHG6 (Homo sapiens)

Ensembl gene IDs: ENSG00000008323

Ensembl transcript IDs: ENST00000011684.11, ENST00000304581.8, ENST00000396988.7, ENST00000449001.6, ENST00000535616.1, ENST00000536531.5, ENST00000538208.1, ENST00000543000.1, ENST00000544743.1, ENST00000684764.1

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTaGGCCAGGCTTCCTTTGGGAAATGTGGTCCTTGAGGTAGAGTCA +
Preference number: 1 (lower is better)
Translates to: NLQFLIPKQSRRQGA*ARLPLGNVVLEVES
Trigger: TGACTCTACCTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR CCA 90 bp CAGCCATGCCCAGCCAGGGCAGTCATTTTTATGCACAACTTTCTGTaGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGAT +
Preference number: 1 (lower is better)
Translates to: QPCPARAVIFMHNFL*GSGAPMIHKFTVLD
Trigger: ATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAAAATGACTGCCCTGGCTGGGCATGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGTGACCAGCACTACTaGGGAGAGATCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGDQHY*GEISSG
Trigger: CCCAGAGGAGATCTCTCCCCAGTAGTGCTGGTCACC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGACAGATGCCGGAGGGTaGCCAGCACTACTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGTDAGG*PALLGR
Trigger: TCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGT...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR TCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGACAGATGCCGGAGGGTaGCCAGCACTACTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQETDAGG*PALLGR
Trigger: TCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGGAGAGATCTCCTCTaGGAGAGATGCATGCCAAAG +
Preference number: 2 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGRDLL*ERCMPK
Trigger: CTTTGGCATGCATCTCTCCCAGAGGAGATCTCTCCC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCTGGGAGAGATGCATaGCAAAGGTCCTCTGCATTC +
Preference number: 2 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSGRDA*QRSSAF
Trigger: GAATGCAGAGGACCTTTGGCATGCATCTCTCCCAGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCTCCTCTGGGAGAGATaGATGCCAAAGGTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGLLWER*MPKVLC
Trigger: GCAGAGGACCTTTGGCATGCATCTCTCCCAGAGGAG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR TCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAACAGATGCCGGAGGGTaGCCAGCACTACTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTTDAGG*PALLGR
Trigger: TCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGAAATGTGGTCCTTaGGGTAGAGTCACAGATGCC +
Preference number: 2 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGKCGP*GRVTDA
Trigger: GGCATCTGTGACTCTACCTCAAGGACCACATTTCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCTCCTCTGGGAGAGATaGATGCCAAAGGTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQELLWER*MPKVLC
Trigger: GCAGAGGACCTTTGGCATGCATCTCTCCCAGAGGAG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGCCAGGCTTCCTTTaGGAAATGTGGTCCTTGAGG +
Preference number: 2 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGPGFL*EMWSLR
Trigger: CCTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR TCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGAAATGTGGTCCTTaGGGTAGAGTCACAGATGCC +
Preference number: 2 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGKCGP*GRVTDA
Trigger: GGCATCTGTGACTCTACCTCAAGGACCACATTTCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGAGAGATCTCCTCTaGGAGAGATGCATGCCAAAG +
Preference number: 2 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGRDLL*ERCMPK
Trigger: CTTTGGCATGCATCTCTCCCAGAGGAGATCTCTCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGAGAGATCTCCTCTaGGAGAGATGCATGCCAAAG +
Preference number: 2 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGRDLL*ERCMPK
Trigger: CTTTGGCATGCATCTCTCCCAGAGGAGATCTCTCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATCTGGGAGAGATGCATaGCAAAGGTCCTCTGCATTC +
Preference number: 2 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSGRDA*QRSSAF
Trigger: GAATGCAGAGGACCTTTGGCATGCATCTCTCCCAGA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR CCA 72 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTaGGGAGAGATCTCCTCTGGGAGAGATGCATGCCAA +
Preference number: 3 (lower is better)
Translates to: VESQMPEGDQHY*GEISSGRDACQ
Trigger: TTGGCATGCATCTCTCCCAGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTGGGCCAGGCTTCCTTaGGGAAATGTGGTCCTTGAG +
Preference number: 3 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEWARLP*GNVVLE
Trigger: CTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCCA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATGGGCCAGGCTTCCTTaGGGAAATGTGGTCCTTGAG +
Preference number: 3 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTWARLP*GNVVLE
Trigger: CTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCCA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR CCA 72 bp CCAGCCAGGGCAGTCATTTTTATGCACAACTTTCTGTaGGGCTCAGGTGCACCTATGATACATAAATTTACA +
Preference number: 3 (lower is better)
Translates to: PARAVIFMHNFL*GSGAPMIHKFT
Trigger: TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAAAATGACTGCCCTGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
3UTR TCA 72 bp TTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATaGTACATAAATTTACAGTTCTTGATCCCCAAACAG +
Preference number: 3 (lower is better)
Translates to: LCTTFCGAQVHL*YINLQFLIPKQ
Trigger: CTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGGAGGAGGGAAGCTaGCCCCGAAGCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGEEGS*PRSRAL
Trigger: CAGGGCCCGGCTTCGGGGCCAGCTTCCCTCCTCCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGGGAGGAGGGAAGCTaGCCCCGAAGCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGEEGS*PRSRAL
Trigger: CAGGGCCCGGCTTCGGGGCCAGCTTCCCTCCTCCCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGGCGCTTCGGCGTTaGGGAGCTTGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGALRR*GAWGSG
Trigger: TCCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGGGCGCTTCGGCGTTaGGGAGCTTGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGALRR*GAWGSG
Trigger: TCCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCGCAGTCTCATGGGTaGCAGGCCTCGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEISQSHG*QASGLA
Trigger: GGCCAGGCCCGAGGCCTGTCACCCATGAGACTGCGA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCGTGGAGGGCCTGGTaGTGGGGGACTCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSAWRAW*WGTPCP
Trigger: AGGACAGGGAGTCCCCCAGCACCAGGCCCTCCACGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCAGCTTCCGTGGCCTaGTGTCCCGGGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSASVA*CPGAPR
Trigger: CCGAGGAGCCCCGGGACAGCAGGCCACGGAAGCTGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCGGCCTGGGCCTGCTaGGTCTTCTCCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSAAWAC*VFSSHW
Trigger: CCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGCCGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCCGAGTCAGCTTCCGTaGCCTGCTGTCCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIPSQLP*PAVPGL
Trigger: GAGCCCCGGGACAGCAGGCCACGGAAGCTGACTCGG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCTGCCAGCAGTGCTCTaGGCAGAGGCTCGATGCCGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEILPAVL*AEARCR
Trigger: CCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGGTGTCCAGCTGAATaGTGTGGGGCCCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGCPAE*CGAPAS
Trigger: GGATGCGGGGGCCCCACATCATTCAGCTGGACACCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGTGTCCAGCTGAATaGTGTGGGGCCCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGCPAE*CGAPAS
Trigger: GGATGCGGGGGCCCCACATCATTCAGCTGGACACCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCCCACATGGCCCCCGTaGCTCTTCTCGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIPTWPP*LFSGSG
Trigger: TCCAGAGCCCGAGAAGAGGCACGGGGGCCATGTGGG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGCCTCTTGGGCTCGTaGCTCGGGGCTCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGLLGS*LGAPLE
Trigger: CTCAAGAGGAGCCCCGAGGCACGAGCCCAAGAGGCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCCGCCAAGCTCTCTTaGTCTTCGCCCTGGCGGACC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSAAKLS*SSPWRT
Trigger: GGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGCCCGATGCGTTGTaGTGCAGCCGCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGPDAL*CSRQAL
Trigger: GAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCCTCGTAGGGCCCGATaGGTTGTGCTGCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSPRRAR*VVLQPP
Trigger: TGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCCTCCCCTCTGCGCTaGTCTGAGAGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSSPLR*SESPPG
Trigger: CCCTGGAGGGCTCTCAGAGCAGCGCAGAGGGGAGGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGACCCCGTGGGGGTaGCTGGGATCAAAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGTPWG*LGSKCR
Trigger: ACGGCACTTTGATCCCAGGCACCCCCACGGGGTCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGACAGGCCTCGGGCCTaGCCAGAACCCCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIDRPRA*PEPLAK
Trigger: CTTTGCCAGGGGTTCTGGCCAGGCCCGAGGCCTGTC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTGGAGGGCCTGGTGCTaGGGGACTCCCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSWRAWC*GTPCPG
Trigger: ACCAGGACAGGGAGTCCCCCAGCACCAGGCCCTCCA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCCCCGTGGGGGTGCCTaGGATCAAAGTGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIPRGGA*DQSAVA
Trigger: GGCTACGGCACTTTGATCCCAGGCACCCCCACGGGG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCCCCGTGGGGGTGCCTaGGATCAAAGTGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSPRGGA*DQSAVA
Trigger: GGCTACGGCACTTTGATCCCAGGCACCCCCACGGGG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGCCCCCTCAATCCTTTaGCTGGCCAGCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIAPSIL*LASSSR
Trigger: CCGGGAGGAGCTGGCCAGCCAAAGGATTGAGGGGGC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCCTCCCGGATCTCTCTaGGCATGTCCTCAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSPPGSL*ACPQPA
Trigger: TGCGGGCTGAGGACATGCTCAGAGAGATCCGGGAGG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCCTCCCGGATCTCTCTaGGCATGTCCTCAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIPPGSL*ACPQPA
Trigger: TGCGGGCTGAGGACATGCTCAGAGAGATCCGGGAGG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCGCCCTGGCGGACCTaGCCATTGATGTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSPWRT*PLMCRR
Trigger: CCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCAGGAGTCCTCCCCTCTaGGCTGCTCTGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIRSPPL*AALRAL
Trigger: GAGGGCTCTCAGAGCAGCGCAGAGGGGAGGACTCCT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCTGTCTCCCTCGCACTaGTCCCTACCCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSLSPSH*SLPRVL
Trigger: CAGGACCCTGGGTAGGGAGCAGTGCGAGGGAGACAG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396988.7
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTTCTCCCCAGGGGCGTaGAGCCTGCATCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIFSPGA*SLHPIQ
Trigger: CTGGATGGGATGCAGGCTGCACGCCCCTGGGGAGAA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCGACTGGGATCATGTaGAGCCTTCTCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSATGIM*SLLPRG
Trigger: GCCCCTGGGGAGAAGGCTGCACATGATCCCAGTCGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGAGGCGTCGGCGACTaGGATCCAGCACAGGGTATC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGGVGD*DPAQGI
Trigger: GATACCCTGTGCTGGATCCCAGTCGCCGACGCCTCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGAGGCGTCGGCGACTaGGATCCAGCACAGGGTATC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGGVGD*DPAQGI
Trigger: GATACCCTGTGCTGGATCCCAGTCGCCGACGCCTCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCATGCAACCCCCAGCATaGGGGACGTCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIMQPPA*GTSGPG
Trigger: CCCTGGACCTGACGTCCCCCATGCTGGGGGTTGCAT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTTCTGTAGGGCGGCCTaGGCCTGCTGGGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSFCRAA*ACWVFS
Trigger: GGAGAAGACCCAGCAGGCCCAGGCCGCCCTACAGAA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCGCCGAAGGGCTCTTTaGCGTAGACGGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIRRRAL*RRRLSG
Trigger: CCCACTGAGCCGTCTACGCCAAAGAGCCCTTCGGCG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTTCTTCCTCCTCCCCTaGGGACTCCCAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIFFLLP*GLPGAF
Trigger: GAAAGCCCCTGGGAGTCCTCAGGGGAGGAGGAAGAA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTACAGATGCCGGAGGGTaGCCAGCACTACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSTDAGG*PALLGR
Trigger: TCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGT...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCACAGATGCCGGAGGGTaGCCAGCACTACTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEITDAGG*PALLGR
Trigger: TCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGCAAAGGGGACATACTaGTGGAGGCGTCGGCGACTG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIAKGTY*WRRRRL
Trigger: CAGTCGCCGACGCCTCCAGCAGTATGTCCCCTTTGC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCAAAGGGGACATACTaGTGGAGGCGTCGGCGACTG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSAKGTY*WRRRRL
Trigger: CAGTCGCCGACGCCTCCAGCAGTATGTCCCCTTTGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCCCGATGCGTTGTGCTaGAGCCGCCAAGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSPDALC*SRQALL
Trigger: CAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGTAGGACTGGGACAGTaGACAAGGAGGGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIVGLGQ*TRRALE
Trigger: CTCCAGCGCCCTCCTTGTGCACTGTCCCAGTCCTAC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGATCTCGCAGTCTCATaGGTGACAGGCCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSDLAVS*VTGLGP
Trigger: AGGCCCGAGGCCTGTCACCCATGAGACTGCGAGATC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGATCTCGCAGTCTCATaGGTGACAGGCCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIDLAVS*VTGLGP
Trigger: AGGCCCGAGGCCTGTCACCCATGAGACTGCGAGATC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCAGGGCCTCCTGTTGGTaGCAGAGCTCCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIRASCW*QSSWLI
Trigger: GATGAGCCAGGAGCTCTGCCACCAACAGGAGGCCCT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTAGGGCCTCCTGTTGGTaGCAGAGCTCCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSRASCW*QSSWLI
Trigger: GATGAGCCAGGAGCTCTGCCACCAACAGGAGGCCCT...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCGTAGATCAGCTCGGTaGTCAGGAGCTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIRRSAR*SGAPTG
Trigger: CCCTGTGGGAGCTCCTGACCACCGAGCTGATCTACG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCACTTTGCAGACCAATaGGGTCCAGAGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSHFADQ*GPEAGP
Trigger: CGGGCCAGCCTCTGGACCCCATTGGTCTGCAAAGTG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCTCGGGCGTAAGCCATaGTCTGCTTCACTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEILGRKP*SASLGG
Trigger: GCCTCCGAGTGAAGCAGACCATGGCTTACGCCCGAG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCGAAGCCGGGCCCTGTaGAGTGTTTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIRSRAL*SVSTTT
Trigger: TGTGGTGGTGGAAACACTCCACAGGGCCCGGCTTCG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGGATGCTGTATCTTaGGCTCTCCCAGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGDAVS*ALPVAG
Trigger: GCCAGCCACTGGGAGAGCCCAAGATACAGCATCCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCTGAGGGACAGACCTaGCTTCCACACCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSAEGQT*LPHPSA
Trigger: AGCAGAGGGGTGTGGAAGCCAGGTCTGTCCCTCAGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGAGGCGTCGGCGACTaGGATCATGTGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGGVGD*DHVQPS
Trigger: AGAAGGCTGCACATGATCCCAGTCGCCGACGCCTCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCTCCCAGAGCGCTTGTaGTTCTCACACCACTGCACG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSLPERL*FSHHCT
Trigger: CGTGCAGTGGTGTGAGAAGCACAAGCGCTCTGGGAG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGAGGGGGCCCTCATGTaGAGGACCAAAGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIEGALM*RTKGLH
Trigger: ATGAAGGCCTTTGGTCCTCCACATGAGGGCCCCCTC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCCTGGCCAGAACCCCTaGCAAAGGGGACATACTGCT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIPGQNP*QRGHTA
Trigger: AGCAGTATGTCCCCTTTGCCAGGGGTTCTGGCCAGG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCCTCTTCTCGGGCTCTaGATCTCGCAGTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSPLLGL*ISQSHG
Trigger: CCCATGAGACTGCGAGATCCAGAGCCCGAGAAGAGG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCCAGGACTTCTCGATaGTCAGGCCACTGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSRTSR*SGHCRH
Trigger: GTGGCGACAGTGGCCTGACCATCGAGAAGTCCTGGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCCCAAAAGCTCCGGTaGGTTCGAATCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSQKLR*VRIRLG
Trigger: CCCCAGCCTGATTCGAACCCACCGGAGCTTTTGGGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCTTGCTCTTCGCCCTaGCGGACCTGCCCATTGATG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEISCSSP*RTCPLM
Trigger: CATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCTTGCTCTTCGCCCTaGCGGACCTGCCCATTGATG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSCSSP*RTCPLM
Trigger: CATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCACGTCAGGTCCAGGGTaGAGAATGGGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEITSGPG*RMGAGS
Trigger: AGAACCTGCGCCCATTCTCCACCCTGGACCTGACGT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCCTTGCGCTGGGGCTTaGTCACAAGGAGCACATCAG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSPCAGA*SQGAHQ
Trigger: CTGATGTGCTCCTTGTGACCAAGCCCCAGCGCAAGG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGTCTTCTCCAGCCACTaGGCACGGTCTGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSVFSSH*ARSVGL
Trigger: CAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGAC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGTGACCAGCACTACTaGGGAGAGATCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGDQHY*GEISSG
Trigger: CCCAGAGGAGATCTCTCCCCAGTAGTGCTGGTCACC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGTGACCAGCACTACTaGGGAGAGATCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGDQHY*GEISSG
Trigger: CCCAGAGGAGATCTCTCCCCAGTAGTGCTGGTCACC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCTGGTCTGGAACTCCTaGGCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSLVWNS*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGAGTTCCAGACCAG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCTGGTCTGGAACTCCTaGGCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEILVWNS*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGAGTTCCAGACCAG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTGCATCCCATCCAGCTaGGAGTGGCTGCCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEICIPSS*EWLPFC
Trigger: ACAGAAGGGCAGCCACTCCCAGCTGGATGGGATGCA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCGCAGTCTCATGGGTaGCAGGCCTCGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSQSHG*QASGLA
Trigger: GGCCAGGCCCGAGGCCTGTCACCCATGAGACTGCGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCCGTAGCCAGAGTCTaGGGTATCATCTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSAVARV*GIIWHK
Trigger: CTTGTGCCAGATGATACCTCAGACTCTGGCTACGGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGCCGTAGCCAGAGTCTaGGGTATCATCTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIAVARV*GIIWHK
Trigger: CTTGTGCCAGATGATACCTCAGACTCTGGCTACGGC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCAGAGTCTGCCAGCAGTaGTCTGAGCAGAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIRVCQQ*SEQRLD
Trigger: ATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCGTGGAGGGCCTGGTaGTGGGGGACTCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWAWRAW*WGTPCP
Trigger: AGGACAGGGAGTCCCCCAGCACCAGGCCCTCCACGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTGCCTGGGATCAAAGTaGCGTAGCCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEICLGSK*RSQSLR
Trigger: CCTCAGACTCTGGCTACGGCACTTTGATCCCAGGCA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCTCCTCTGGGAGAGATaGATGCCAAAGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSLLWER*MPKVLC
Trigger: GCAGAGGACCTTTGGCATGCATCTCTCCCAGAGGAG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCTCCTCTGGGAGAGATaGATGCCAAAGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEILLWER*MPKVLC
Trigger: GCAGAGGACCTTTGGCATGCATCTCTCCCAGAGGAG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGATTACAGGCAGCCATaGCCAGCCAGGGCAGTCATT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIDYRQP*PARAVI
Trigger: AATGACTGCCCTGGCTGGGCATGGCTGCCTGTAATC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCTCCTCCTCCCCTCTaGGCTCCCATGTTCATTCGT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEISPPPL*APMFIR
Trigger: ACGAATGAACATGGGAGCGCAGAGGGGAGGAGGAGA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCTCACCTCCAGCTCATaGGCCTTGGTGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSLTSSS*ALVSSL
Trigger: CAAGGAACTCACCAAGGCCCATGAGCTGGAGGTGAG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCCACGGCTTCAATCATaGCATTCAGGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSPRLQS*HSGPLG
Trigger: CCCAAGAGGCCCTGAATGCCATGATTGAAGCCGTGG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGCACAAGGAGGGCGCTaGAGACACACTGGAATTCAG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSAQGGR*RHTGIQ
Trigger: CTGAATTCCAGTGTGTCTCCAGCGCCCTCCTTGTGC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGCACAAGGAGGGCGCTaGAGACACACTGGAATTCAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIAQGGR*RHTGIQ
Trigger: CTGAATTCCAGTGTGTCTCCAGCGCCCTCCTTGTGC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCTCAGACCAGGTTGGTaGGTCTTCCTGGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSLRPGW*VFLGKT
Trigger: AGTCTTCCCCAGGAAGACCCACCAACCTGGTCTGAG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTTCCTCAGACCAGGTTaGTGGGTCTTCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSFLRPG*WVFLGK
Trigger: CTTCCCCAGGAAGACCCACCAACCTGGTCTGAGGAA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGGAGGAGGGAAGCTaGCCCCGAAGCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGEEGS*PRSRAL
Trigger: CAGGGCCCGGCTTCGGGGCCAGCTTCCCTCCTCCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCTGCCAGCAGTGCTCTaGGCAGAGGCTCGATGCCGG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWLPAVL*AEARCR
Trigger: CCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGCATCCCAAACATGCTaGAAGTGTGCAGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIASQTC*KCAASP
Trigger: AGGTGAGGCTGCACACTTTCAGCATGTTTGGGATGC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGGCGCTTCGGCGTTaGGGAGCTTGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGALRR*GAWGSG
Trigger: TCCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGGAAATGTGGTCCTTaGGGTAGAGTCACAGATGCC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGKCGP*GRVTDA
Trigger: GGCATCTGTGACTCTACCTCAAGGACCACATTTCCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGAAATGTGGTCCTTaGGGTAGAGTCACAGATGCC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGKCGP*GRVTDA
Trigger: GGCATCTGTGACTCTACCTCAAGGACCACATTTCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCTCCTATCTCCCAGTaGCGCCGGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSPISQ*RRSSGG
Trigger: GCCCCCTGAGGACCGGCGGCACTGGGAGATAGGAGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGGACCCCGTGGGGGTaGCTGGGATCAAAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGTPWG*LGSKCR
Trigger: ACGGCACTTTGATCCCAGGCACCCCCACGGGGTCCC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGGTTCGAATCAGGCTaGGGACATTTCCAAACAGGG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGFESG*GHFQTG
Trigger: CCCTGTTTGGAAATGTCCCCAGCCTGATTCGAACCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCATTCAGGGCCTCTTaGGCTCGTGCCTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWAFRAS*ARASGL
Trigger: GAGCCCCGAGGCACGAGCCCAAGAGGCCCTGAATGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGAAGGCGTGGAGGGCCTaGTGCTGGGGGACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWKAWRA*CWGTPC
Trigger: ACAGGGAGTCCCCCAGCACCAGGCCCTCCACGCCTT...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCTGTCACCACCAGGTaGGGGATAATGGTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEISVTTR*GIMVEN
Trigger: GTTCTCGACCATTATCCCCCACCTGGTGGTGACAGA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGTCCTCAGCCCGCATTaGGCGCAGGGATGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWVLSPH*AQGCVA
Trigger: GGCCACACATCCCTGCGCCCAATGCGGGCTGAGGAC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGGAGAGATCTCCTCTaGGAGAGATGCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGRDLL*ERCMPK
Trigger: CTTTGGCATGCATCTCTCCCAGAGGAGATCTCTCCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGCTGGCACAGTAGCTaGCCAAAGGCTTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGWHSS*PKAFSV
Trigger: GACAGAAAAAGCCTTTGGCCAGCTACTGTGCCAGCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCCTCGGGGCTCCTCTTaGGCACAGCATGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWPRGSS*AQHGAA
Trigger: TGCTGCTCCATGCTGTGCTCAAGAGGAGCCCCGAGG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGATGTGTCGCAGGAATaGCTCCACGGCTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIDVSQE*LHGFNH
Trigger: ATGATTGAAGCCGTGGAGTCATTCCTGCGACACATC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGATGTGTCGCAGGAATaGCTCCACGGCTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSDVSQE*LHGFNH
Trigger: ATGATTGAAGCCGTGGAGTCATTCCTGCGACACATC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTGCTTCTCACACCACTaGACGAAGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEICFSHH*TKAWKR
Trigger: TCTCTTCCATGCCTTCGTGCAGTGGTGTGAGAAGCA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTGCTTCTCACACCACTaGACGAAGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSCFSHH*TKAWKR
Trigger: TCTCTTCCATGCCTTCGTGCAGTGGTGTGAGAAGCA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGCGTGGAGGGCCTGGTaGTGGGGGACTCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGAWRAW*WGTPCP
Trigger: AGGACAGGGAGTCCCCCAGCACCAGGCCCTCCACGC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTCAGCTTCCGTGGCCTaGTGTCCCGGGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSASVA*CPGAPR
Trigger: CCGAGGAGCCCCGGGACAGCAGGCCACGGAAGCTGA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCTGGGAGAGATGCATaGCAAAGGTCCTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEISGRDA*QRSSAF
Trigger: GAATGCAGAGGACCTTTGGCATGCATCTCTCCCAGA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCTGGGAGAGATGCATaGCAAAGGTCCTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSGRDA*QRSSAF
Trigger: GAATGCAGAGGACCTTTGGCATGCATCTCTCCCAGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCACAGGGCCTCCTGTTaGTGGCAGAGCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWHRASC*WQSSWL
Trigger: GAGCCAGGAGCTCTGCCACCAACAGGAGGCCCTGTG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGATGGGGTCCAGAGGCTaGCCCGAGGCCCGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGMGSRG*PEARVS
Trigger: GGAGACTCGGGCCTCGGGCCAGCCTCTGGACCCCAT...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTACTTGGTGATGCGCTaGTGGGGCTTGATAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIYLVMR*WGLISK
Trigger: CTTGCTTATCAAGCCCCACCAGCGCATCACCAAGTA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGGTCTCGCAGGGGTTaGCACACGAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGSRRG*HTSFSS
Trigger: GCTGGAGAAGCTCGTGTGCCAACCCCTGCGAGACCC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTTCTGTAGGGCGGCCTaGGCCTGCTGGGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWFCRAA*ACWVFS
Trigger: GGAGAAGACCCAGCAGGCCCAGGCCGCCCTACAGAA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCCGAGTCAGCTTCCGTaGCCTGCTGTCCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGPSQLP*PAVPGL
Trigger: GAGCCCCGGGACAGCAGGCCACGGAAGCTGACTCGG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCGCATCCTCTGCAGCTaGGCCCGAGTCAGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWRILCS*ARVSFR
Trigger: ACGGAAGCTGACTCGGGCCCAGCTGCAGAGGATGCG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCATGCACAACTTTCTGTaGGGCTCAGGTGCACCTATG +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIMHNFL*GSGAPM
Trigger: CATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCAT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTTCTTCCTCCTCCCCTaGGGACTCCCAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWFFLLP*GLPGAF
Trigger: GAAAGCCCCTGGGAGTCCTCAGGGGAGGAGGAAGAA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCAAAGGGGACATACTaGTGGAGGCGTCGGCGACTG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWAKGTY*WRRRRL
Trigger: CAGTCGCCGACGCCTCCAGCAGTATGTCCCCTTTGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGAGCAGTCCCACTCGCTaGAGGTTCAGCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSSPTR*RFSRPA
Trigger: CGCCGGCCTGCTGAACCTGCAGCGAGTGGGACTGCT...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGCCTCTTGGGCTCGTaGCTCGGGGCTCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGLLGS*LGAPLE
Trigger: CTCAAGAGGAGCCCCGAGGCACGAGCCCAAGAGGCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCCCGATGCGTTGTGCTaGAGCCGCCAAGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWPDALC*SRQALL
Trigger: CAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGCCCGATGCGTTGTaGTGCAGCCGCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGPDAL*CSRQAL
Trigger: GAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCCTCGTAGGGCCCGATaGGTTGTGCTGCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGPRRAR*VVLQPP
Trigger: TGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGTAGGACTGGGACAGTaGACAAGGAGGGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWVGLGQ*TRRALE
Trigger: CTCCAGCGCCCTCCTTGTGCACTGTCCCAGTCCTAC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGCGTGGAGGGCCTGGTaGTGGGGGACTCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPAWRAW*WGTPCP
Trigger: AGGACAGGGAGTCCCCCAGCACCAGGCCCTCCACGC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGACCCCGTGGGGGTaGCTGGGATCAAAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGTPWG*LGSKCR
Trigger: ACGGCACTTTGATCCCAGGCACCCCCACGGGGTCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTCTTCCTGGGGAAGACTaGCTCCTTTTAGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSLPGED*LLLGFL
Trigger: AAGGAATCCTAAAAGGAGGCAGTCTTCCCCAGGAAG...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTCAGCTTCCGTGGCCTaGTGTCCCGGGGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSASVA*CPGAPR
Trigger: CCGAGGAGCCCCGGGACAGCAGGCCACGGAAGCTGA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCGGCCTTCAGGGGATaGTGTATCTTGGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWAAFRG*CILGSP
Trigger: GGGAGAGCCCAAGATACAGCATCCCCTGAAGGCCGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGTTCGCTGTCCCTCCTaGCGCCTCCCAATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWVRCPS*RLPIVL
Trigger: GAGGACTATTGGGAGGCGGCAGGAGGGACAGCGAAC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396988.7
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCAGGGGCGTGCAGCCTaGATCCCATCCAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGQGRAA*IPSSWE
Trigger: CTCCCAGCTGGATGGGATGCAGGCTGCACGCCCCTG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGATCTCGCAGTCTCATaGGTGACAGGCCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWDLAVS*VTGLGP
Trigger: AGGCCCGAGGCCTGTCACCCATGAGACTGCGAGATC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCATGGGGTCCAGAGGCTaGCCCGAGGCCCGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPMGSRG*PEARVS
Trigger: GGAGACTCGGGCCTCGGGCCAGCCTCTGGACCCCAT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCTCGGGCGTAAGCCATaGTCTGCTTCACTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWLGRKP*SASLGG
Trigger: GCCTCCGAGTGAAGCAGACCATGGCTTACGCCCGAG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCACTGCACGAAGGCATaGAAGAGAGGGTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIHCTKA*KRGLVS
Trigger: AGAAACTAACCCTCTCTTCCATGCCTTCGTGCAGTG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCACCTCATCACTGGGTaGCTCCAGCACCTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWHLITG*LQHLVG
Trigger: CCCTACGAGGTGCTGGAGCCACCCAGTGATGAGGTG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTGGAATTCAGTGAGGTaGATCAGCAGGAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSWNSVR*ISRKLL
Trigger: CAACAGCTTCCTGCTGATCCACCTCACTGAATTCCA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGCGGCCTGGGCCTGCTaGGTCTTCTCCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPAAWAC*VFSSHW
Trigger: CCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGCCGC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGGAGCGGGACCCCGTaGGGGTGCCTGGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGSGTP*GCLGSK
Trigger: CTTTGATCCCAGGCACCCCCACGGGGTCCCGCTCCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGGAGGAGGGAAGCTaGCCCCGAAGCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGEEGS*PRSRAL
Trigger: CAGGGCCCGGCTTCGGGGCCAGCTTCCCTCCTCCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCGAGTCAGCTTCCGTaGCCTGCTGTCCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPSQLP*PAVPGL
Trigger: GAGCCCCGGGACAGCAGGCCACGGAAGCTGACTCGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGTCCCTACCCACCACTaGAGGAGTAGGGACACCCTG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWVPTHH*RSRDTL
Trigger: CAGGGTGTCCCTACTCCTCCAGTGGTGGGTAGGGAC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCCTCGGGGCTCCTCTTaGGCACAGCATGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGPRGSS*AQHGAA
Trigger: TGCTGCTCCATGCTGTGCTCAAGAGGAGCCCCGAGG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGGCGCTTCGGCGTTaGGGAGCTTGGGGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGALRR*GAWGSG
Trigger: TCCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCCTCCCGGATCTCTCTaGGCATGTCCTCAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGPPGSL*ACPQPA
Trigger: TGCGGGCTGAGGACATGCTCAGAGAGATCCGGGAGG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGGTGTCCAGCTGAATaGTGTGGGGCCCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGCPAE*CGAPAS
Trigger: GGATGCGGGGGCCCCACATCATTCAGCTGGACACCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCCACATGGCCCCCGTaGCTCTTCTCGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPTWPP*LFSGSG
Trigger: TCCAGAGCCCGAGAAGAGGCACGGGGGCCATGTGGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCCCACATGGCCCCCGTaGCTCTTCTCGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPPTWPP*LFSGSG
Trigger: TCCAGAGCCCGAGAAGAGGCACGGGGGCCATGTGGG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTCTCCTATCTCCCAGTaGCGCCGGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSPISQ*RRSSGG
Trigger: GCCCCCTGAGGACCGGCGGCACTGGGAGATAGGAGA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGCCGCCAAGCTCTCTTaGTCTTCGCCCTGGCGGACC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPAAKLS*SSPWRT
Trigger: GGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCCGCCAAGCTCTCTTaGTCTTCGCCCTGGCGGACC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEAAKLS*SSPWRT
Trigger: GGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGCCCGATGCGTTGTaGTGCAGCCGCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGPDAL*CSRQAL
Trigger: GAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCTCGTAGGGCCCGATaGGTTGTGCTGCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPRRAR*VVLQPP
Trigger: TGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCTGGTGTGCTCAGATaGAACCCCCAGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSGVLR*NPQHGG
Trigger: TCCCCCATGCTGGGGGTTGCATCTGAGCACACCAGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGAGCAGCTGTCTGGTGTaGTCAGATGCAACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSSCLV*SDATPS
Trigger: GCTGGGGGTTGCATCTGAGCACACCAGACAGCTGCT...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTCCTCCCCTCTGCGCTaGTCTGAGAGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQESSPLR*SESPPG
Trigger: CCCTGGAGGGCTCTCAGAGCAGCGCAGAGGGGAGGA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGAGGAGTCCTCCCCTCTaGGCTGCTCTGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGRSPPL*AALRAL
Trigger: GAGGGCTCTCAGAGCAGCGCAGAGGGGAGGACTCCT...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCATGCCAAAGGTCCTCTaGATTCCTCATACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIMPKVL*IPHTSD
Trigger: ATCAGAGGTATGAGGAATGCAGAGGACCTTTGGCAT...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTATGCCAAAGGTCCTCTaGATTCCTCATACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSMPKVL*IPHTSD
Trigger: ATCAGAGGTATGAGGAATGCAGAGGACCTTTGGCAT...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGGCAGTCATTTTTATaGACAACTTTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGQSFL*TTFCGA
Trigger: AGCCCCACAGAAAGTTGTGCATAAAAATGACTGCCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGCAGTCATTTTTATaGACAACTTTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGQSFL*TTFCGA
Trigger: AGCCCCACAGAAAGTTGTGCATAAAAATGACTGCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGAGGCCACGAGTCCTTaGAGGGGGCCCTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGEATSP*RGPSCG
Trigger: TCCACATGAGGGCCCCCTCCAAGGACTCGTGGCCTC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGACAGGCCTCGGGCCTaGCCAGAACCCCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPDRPRA*PEPLAK
Trigger: CTTTGCCAGGGGTTCTGGCCAGGCCCGAGGCCTGTC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCCCAAAAGCTCCGGTaGGTTCGAATCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSQKLR*VRIRLG
Trigger: CCCCAGCCTGATTCGAACCCACCGGAGCTTTTGGGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGCATTCAGGGCCTCTTaGGCTCGTGCCTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPAFRAS*ARASGL
Trigger: GAGCCCCGAGGCACGAGCCCAAGAGGCCCTGAATGC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCTTGCTCTTCGCCCTaGCGGACCTGCCCATTGATG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSCSSP*RTCPLM
Trigger: CATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGTCCAGGGTGGAGAATaGGCGCAGGTTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWVQGGE*AQVLLH
Trigger: GTGGAGAAGAACCTGCGCCCATTCTCCACCCTGGAC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCCAGCAGCAGCTGTCTaGTGTGCTCAGATGCAACCC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWPAAAV*CAQMQP
Trigger: GGGTTGCATCTGAGCACACCAGACAGCTGCTGCTGG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCCTTGCGCTGGGGCTTaGTCACAAGGAGCACATCAG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWPCAGA*SQGAHQ
Trigger: CTGATGTGCTCCTTGTGACCAAGCCCCAGCGCAAGG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTGGAGGGCCTGGTGCTaGGGGACTCCCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEWRAWC*GTPCPG
Trigger: ACCAGGACAGGGAGTCCCCCAGCACCAGGCCCTCCA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGAAGGCGTGGAGGGCCTaGTGCTGGGGGACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEKAWRA*CWGTPC
Trigger: ACAGGGAGTCCCCCAGCACCAGGCCCTCCACGCCTT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCGCCGAAGGGCTCTTTaGCGTAGACGGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGRRRAL*RRRLSG
Trigger: CCCACTGAGCCGTCTACGCCAAAGAGCCCTTCGGCG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCCGGCAGAGTCAGCATaGGTTGGGGAGGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGPAESA*VGEEGS
Trigger: GCTTCCCTCCTCCCCAACCCATGCTGACTCTGCCGG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGGCGCAGGGATGTGTaGCCAGCTTTCAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGRRDV*PAFRNR
Trigger: TCTGTTCCTGAAAGCTGGCCACACATCCCTGCGCCC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGTCCTCAGCCCGCATTaGGCGCAGGGATGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEVLSPH*AQGCVA
Trigger: GGCCACACATCCCTGCGCCCAATGCGGGCTGAGGAC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCCACACCCCTCTGCTTaGTTAGGACTGGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWPHPSA*LGLEES
Trigger: GCTCTCCTCCAGTCCTAACCAAGCAGAGGGGTGTGG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCCGTAGCCAGAGTCTaGGGTATCATCTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWAVARV*GIIWHK
Trigger: CTTGTGCCAGATGATACCTCAGACTCTGGCTACGGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGAAACCTGCAGGCTaGGGGACAGACCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGKPAG*GTDLAS
Trigger: GGAAGCCAGGTCTGTCCCTCAGCCTGCAGGTTTCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCCCCATAAGTCTCAATaGGGGAGGCCACGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWPHKSQ*GRPRVL
Trigger: AAGGACTCGTGGCCTCCCGCATTGAGACTTATGGGG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTCGCCCTGGCGGACCTaGCCATTGATGTGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSPWRT*PLMCRR
Trigger: CCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCCCGATGCGTTGTGCTaGAGCCGCCAAGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGPDALC*SRQALL
Trigger: CAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGTAGGACTGGGACAGTaGACAAGGAGGGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGVGLGQ*TRRALE
Trigger: CTCCAGCGCCCTCCTTGTGCACTGTCCCAGTCCTAC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCAGGAGTCCTCCCCTCTaGGCTGCTCTGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPRSPPL*AALRAL
Trigger: GAGGGCTCTCAGAGCAGCGCAGAGGGGAGGACTCCT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTGCCTGGGATCAAAGTaGCGTAGCCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWCLGSK*RSQSLR
Trigger: CCTCAGACTCTGGCTACGGCACTTTGATCCCAGGCA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCTCACCTCCAGCTCATaGGCCTTGGTGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWLTSSS*ALVSSL
Trigger: CAAGGAACTCACCAAGGCCCATGAGCTGGAGGTGAG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGAGGGCCTCCTGTTGGTaGCAGAGCTCCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGRASCW*QSSWLI
Trigger: GATGAGCCAGGAGCTCTGCCACCAACAGGAGGCCCT...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCACAGGGCCTCCTGTTaGTGGCAGAGCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPHRASC*WQSSWL
Trigger: GAGCCAGGAGCTCTGCCACCAACAGGAGGCCCTGTG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCACCTCATCACTGGGTaGCTCCAGCACCTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGHLITG*LQHLVG
Trigger: CCCTACGAGGTGCTGGAGCCACCCAGTGATGAGGTG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCATGCAACCCCCAGCATaGGGGACGTCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPMQPPA*GTSGPG
Trigger: CCCTGGACCTGACGTCCCCCATGCTGGGGGTTGCAT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGTCTCGCAGGGGTTaGCACACGAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGSRRG*HTSFSS
Trigger: GCTGGAGAAGCTCGTGTGCCAACCCCTGCGAGACCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTCAGCAGGAAGCTGTTaGGGTCTCGCAGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSAGSC*GLAGVG
Trigger: GCCAACCCCTGCGAGACCCCAACAGCTTCCTGCTGA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGCGGCCTGGGCCTGCTaGGTCTTCTCCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTAAWAC*VFSSHW
Trigger: CCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGCCGC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTTCTGTAGGGCGGCCTaGGCCTGCTGGGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEFCRAA*ACWVFS
Trigger: GGAGAAGACCCAGCAGGCCCAGGCCGCCCTACAGAA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGAGCGGGACCCCGTaGGGGTGCCTGGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGSGTP*GCLGSK
Trigger: CTTTGATCCCAGGCACCCCCACGGGGTCCCGCTCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCGCCGAAGGGCTCTTTaGCGTAGACGGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQERRRAL*RRRLSG
Trigger: CCCACTGAGCCGTCTACGCCAAAGAGCCCTTCGGCG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCTCAGACCAGGTTGGTaGGTCTTCCTGGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWLRPGW*VFLGKT
Trigger: AGTCTTCCCCAGGAAGACCCACCAACCTGGTCTGAG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCGGCAGAGTCAGCATaGGTTGGGGAGGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPAESA*VGEEGS
Trigger: GCTTCCCTCCTCCCCAACCCATGCTGACTCTGCCGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCGCATCCTCTGCAGCTaGGCCCGAGTCAGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQERILCS*ARVSFR
Trigger: ACGGAAGCTGACTCGGGCCCAGCTGCAGAGGATGCG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCCATCCAGCTGGGAGTaGCTGCCCTTCTGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWPSSWE*LPFCVK
Trigger: TTTCACACAGAAGGGCAGCCACTCCCAGCTGGATGG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGCACACTGGAATTCAGTaGGGTGGATCAGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWHTGIQ*GGSAGS
Trigger: GCTTCCTGCTGATCCACCTCACTGAATTCCAGTGTG...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATCTCCTATCTCCCAGTaGCGCCGGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSPISQ*RRSSGG
Trigger: GCCCCCTGAGGACCGGCGGCACTGGGAGATAGGAGA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAAGCAGTCCCACTCGCTaGAGGTTCAGCAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSSPTR*RFSRPA
Trigger: CGCCGGCCTGCTGAACCTGCAGCGAGTGGGACTGCT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCTCCCAGAGCGCTTGTaGTTCTCACACCACTGCACG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGLPERL*FSHHCT
Trigger: CGTGCAGTGGTGTGAGAAGCACAAGCGCTCTGGGAG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGCCTCTTGGGCTCGTaGCTCGGGGCTCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGLLGS*LGAPLE
Trigger: CTCAAGAGGAGCCCCGAGGCACGAGCCCAAGAGGCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTCTGGTGTGCTCAGATaGAACCCCCAGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSGVLR*NPQHGG
Trigger: TCCCCCATGCTGGGGGTTGCATCTGAGCACACCAGA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATCCTCCCCTCTGCGCTaGTCTGAGAGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSSPLR*SESPPG
Trigger: CCCTGGAGGGCTCTCAGAGCAGCGCAGAGGGGAGGA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCAAGGCCTCAAACTCCTaGCAAGCAGAGGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPKASNS*QAEAGA
Trigger: GGCTCCCGCCTCTGCTTGGCAGGAGTTTGAGGCCTT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGAAGGGGACATACTGCTaGAGGCGTCGGCGACTGGGA +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEKGTYC*RRRRLG
Trigger: TCCCAGTCGCCGACGCCTCCAGCAGTATGTCCCCTT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCAAGGGGACATACTGCTaGAGGCGTCGGCGACTGGGA +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPKGTYC*RRRRLG
Trigger: TCCCAGTCGCCGACGCCTCCAGCAGTATGTCCCCTT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGACAGGCCTCGGGCCTaGCCAGAACCCCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTDRPRA*PEPLAK
Trigger: CTTTGCCAGGGGTTCTGGCCAGGCCCGAGGCCTGTC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCGTAGATCAGCTCGGTaGTCAGGAGCTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPRRSAR*SGAPTG
Trigger: CCCTGTGGGAGCTCCTGACCACCGAGCTGATCTACG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCGTAGATCAGCTCGGTaGTCAGGAGCTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQERRSAR*SGAPTG
Trigger: CCCTGTGGGAGCTCCTGACCACCGAGCTGATCTACG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCACTTTGCAGACCAATaGGGTCCAGAGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEHFADQ*GPEAGP
Trigger: CGGGCCAGCCTCTGGACCCCATTGGTCTGCAAAGTG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTTGTCCGCCTTGCGCTaGGGCTTGGTCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPLSALR*GLVTRS
Trigger: GCTCCTTGTGACCAAGCCCCAGCGCAAGGCGGACAA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTTGTCCGCCTTGCGCTaGGGCTTGGTCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQELSALR*GLVTRS
Trigger: GCTCCTTGTGACCAAGCCCCAGCGCAAGGCGGACAA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTCAGCAGGAAGCTGTTaGGGTCTCGCAGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQESAGSC*GLAGVG
Trigger: GCCAACCCCTGCGAGACCCCAACAGCTTCCTGCTGA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGTCTTCTCCAGCCACTaGGCACGGTCTGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGVFSSH*ARSVGL
Trigger: CAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGAC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAAAGGCGTGGAGGGCCTaGTGCTGGGGGACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTKAWRA*CWGTPC
Trigger: ACAGGGAGTCCCCCAGCACCAGGCCCTCCACGCCTT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCTGTCACCACCAGGTaGGGGATAATGGTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSVTTR*GIMVEN
Trigger: GTTCTCGACCATTATCCCCCACCTGGTGGTGACAGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACCCCGTGGGGGTGCCTaGGATCAAAGTGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTPRGGA*DQSAVA
Trigger: GGCTACGGCACTTTGATCCCAGGCACCCCCACGGGG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCGAAGCCGGGCCCTGTaGAGTGTTTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQERSRAL*SVSTTT
Trigger: TGTGGTGGTGGAAACACTCCACAGGGCCCGGCTTCG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGCGCAGGGATGTGTaGCCAGCTTTCAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGRRDV*PAFRNR
Trigger: TCTGTTCCTGAAAGCTGGCCACACATCCCTGCGCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTCCTCAGCCCGCATTaGGCGCAGGGATGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTVLSPH*AQGCVA
Trigger: GGCCACACATCCCTGCGCCCAATGCGGGCTGAGGAC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGCCCCCTCAATCCTTTaGCTGGCCAGCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTAPSIL*LASSSR
Trigger: CCGGGAGGAGCTGGCCAGCCAAAGGATTGAGGGGGC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCTGGTCTGGAACTCCTaGGCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGLVWNS*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGAGTTCCAGACCAG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGCTCTCCCAGTGGCTaGCACAGTAGCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGSPSG*HSSWPK
Trigger: CTTTGGCCAGCTACTGTGCCAGCCACTGGGAGAGCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR TCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGCGGACCTGCCCATTaGTGTGTCGCAGGAATGACT +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGGPAH*CVAGMT
Trigger: AGTCATTCCTGCGACACATCAATGGGCAGGTCCGCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGCGGACCTGCCCATTaGTGTGTCGCAGGAATGACT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGGPAH*CVAGMT
Trigger: AGTCATTCCTGCGACACATCAATGGGCAGGTCCGCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGCCGTAGCCAGAGTCTaGGGTATCATCTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGAVARV*GIIWHK
Trigger: CTTGTGCCAGATGATACCTCAGACTCTGGCTACGGC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCTTTTTCTGTCTTCTaGTGGATGGTGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWAFSVF*WMVEAL
Trigger: CAGAGCCTCCACCATCCATCAGAAGACAGAAAAAGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCTCGGGGATAGAGTCTaGCAGCAGTGCTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPLGDRV*QQCSEQ
Trigger: CTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCTCCCAGAGCGCTTGTaGTTCTCACACCACTGCACG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPLPERL*FSHHCT
Trigger: CGTGCAGTGGTGTGAGAAGCACAAGCGCTCTGGGAG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTCTGGTGTGCTCAGATaGAACCCCCAGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSGVLR*NPQHGG
Trigger: TCCCCCATGCTGGGGGTTGCATCTGAGCACACCAGA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCAGCAGCTGTCTGGTGTaGTCAGATGCAACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSSCLV*SDATPS
Trigger: GCTGGGGGTTGCATCTGAGCACACCAGACAGCTGCT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGATCAAAGTaGCGTAGCCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGCLGSK*RSQSLR
Trigger: CCTCAGACTCTGGCTACGGCACTTTGATCCCAGGCA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGATTACAGGCAGCCATaGCCAGCCAGGGCAGTCATT +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGDYRQP*PARAVI
Trigger: AATGACTGCCCTGGCTGGGCATGGCTGCCTGTAATC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGCTTCCACACCCCTCTaGTTGGTTAGGACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGASTPL*LVRTGG
Trigger: TCCTCCAGTCCTAACCAAGCAGAGGGGTGTGGAAGC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTCATCCCTTCTCTCCTaGGTCACCTCCAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSSLLS*VTSKGP
Trigger: TGGCCCTTTGGAGGTGACCCAGGAGAGAAGGGATGA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCCTGGCCAGAACCCCTaGCAAAGGGGACATACTGCT +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPPGQNP*QRGHTA
Trigger: AGCAGTATGTCCCCTTTGCCAGGGGTTCTGGCCAGG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCTCTTCTCGGGCTCTaGATCTCGCAGTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPLLGL*ISQSHG
Trigger: CCCATGAGACTGCGAGATCCAGAGCCCGAGAAGAGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTCCAGGACTTCTCGATaGTCAGGCCACTGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSRTSR*SGHCRH
Trigger: GTGGCGACAGTGGCCTGACCATCGAGAAGTCCTGGA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTCCCAAAAGCTCCGGTaGGTTCGAATCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSQKLR*VRIRLG
Trigger: CCCCAGCCTGATTCGAACCCACCGGAGCTTTTGGGA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGTCCAGGGTGGAGAATaGGCGCAGGTTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPVQGGE*AQVLLH
Trigger: GTGGAGAAGAACCTGCGCCCATTCTCCACCCTGGAC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGACGTCAGGTCCAGGGTaGAGAATGGGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQETSGPG*RMGAGS
Trigger: AGAACCTGCGCCCATTCTCCACCCTGGACCTGACGT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCACGTCAGGTCCAGGGTaGAGAATGGGCGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPTSGPG*RMGAGS
Trigger: AGAACCTGCGCCCATTCTCCACCCTGGACCTGACGT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAATGCAACCCCCAGCATaGGGGACGTCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTMQPPA*GTSGPG
Trigger: CCCTGGACCTGACGTCCCCCATGCTGGGGGTTGCAT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCAGCAGCAGCTGTCTaGTGTGCTCAGATGCAACCC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPAAAV*CAQMQP
Trigger: GGGTTGCATCTGAGCACACCAGACAGCTGCTGCTGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCCAGCAGCAGCTGTCTaGTGTGCTCAGATGCAACCC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPPAAAV*CAQMQP
Trigger: GGGTTGCATCTGAGCACACCAGACAGCTGCTGCTGG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCTTGCGCTGGGGCTTaGTCACAAGGAGCACATCAG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPCAGA*SQGAHQ
Trigger: CTGATGTGCTCCTTGTGACCAAGCCCCAGCGCAAGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGTCTCGCAGGGGTTaGCACACGAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGSRRG*HTSFSS
Trigger: GCTGGAGAAGCTCGTGTGCCAACCCCTGCGAGACCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGTCTTCTCCAGCCACTaGGCACGGTCTGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPVFSSH*ARSVGL
Trigger: CAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGAC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACGCCGAAGGGCTCTTTaGCGTAGACGGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTRRRAL*RRRLSG
Trigger: CCCACTGAGCCGTCTACGCCAAAGAGCCCTTCGGCG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACCGGCAGAGTCAGCATaGGTTGGGGAGGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTPAESA*VGEEGS
Trigger: GCTTCCCTCCTCCCCAACCCATGCTGACTCTGCCGG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACGCATCCTCTGCAGCTaGGCCCGAGTCAGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTRILCS*ARVSFR
Trigger: ACGGAAGCTGACTCGGGCCCAGCTGCAGAGGATGCG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGTGACCAGCACTACTaGGGAGAGATCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGDQHY*GEISSG
Trigger: CCCAGAGGAGATCTCTCCCCAGTAGTGCTGGTCACC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGTGACCAGCACTACTaGGGAGAGATCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGDQHY*GEISSG
Trigger: CCCAGAGGAGATCTCTCCCCAGTAGTGCTGGTCACC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGCCAGGCTTCCTTTaGGAAATGTGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGPGFL*EMWSLR
Trigger: CCTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGAACTGTCCTCAAGGTaGAGGGGAAACCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGELSSR*RGNLQA
Trigger: AGCCTGCAGGTTTCCCCTCCACCTTGAGGACAGTTC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCACACTGGAATTCAGTaGGGTGGATCAGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGHTGIQ*GGSAGS
Trigger: GCTTCCTGCTGATCCACCTCACTGAATTCCAGTGTG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATTCTTCCTCCTCCCCTaGGGACTCCCAGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTFFLLP*GLPGAF
Trigger: GAAAGCCCCTGGGAGTCCTCAGGGGAGGAGGAAGAA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCAGAGTCTGCCAGCAGTaGTCTGAGCAGAGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPRVCQQ*SEQRLD
Trigger: ATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTCATCCCTTCTCTCCTaGGTCACCTCCAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQESSLLS*VTSKGP
Trigger: TGGCCCTTTGGAGGTGACCCAGGAGAGAAGGGATGA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCCACGGCTTCAATCATaGCATTCAGGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPPRLQS*HSGPLG
Trigger: CCCAAGAGGCCCTGAATGCCATGATTGAAGCCGTGG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCCACGGCTTCAATCATaGCATTCAGGGCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEPRLQS*HSGPLG
Trigger: CCCAAGAGGCCCTGAATGCCATGATTGAAGCCGTGG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACACCTCATCACTGGGTaGCTCCAGCACCTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTHLITG*LQHLVG
Trigger: CCCTACGAGGTGCTGGAGCCACCCAGTGATGAGGTG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATTGTCCGCCTTGCGCTaGGGCTTGGTCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTLSALR*GLVTRS
Trigger: GCTCCTTGTGACCAAGCCCCAGCGCAAGGCGGACAA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATCAGCAGGAAGCTGTTaGGGTCTCGCAGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSAGSC*GLAGVG
Trigger: GCCAACCCCTGCGAGACCCCAACAGCTTCCTGCTGA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTGGAATTCAGTGAGGTaGATCAGCAGGAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWWNSVR*ISRKLL
Trigger: CAACAGCTTCCTGCTGATCCACCTCACTGAATTCCA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTCTGTCACCACCAGGTaGGGGATAATGGTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSVTTR*GIMVEN
Trigger: GTTCTCGACCATTATCCCCCACCTGGTGGTGACAGA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTTCCTCAGACCAGGTTaGTGGGTCTTCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEFLRPG*WVFLGK
Trigger: CTTCCCCAGGAAGACCCACCAACCTGGTCTGAGGAA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACGAAGCCGGGCCCTGTaGAGTGTTTCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTRSRAL*SVSTTT
Trigger: TGTGGTGGTGGAAACACTCCACAGGGCCCGGCTTCG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGAGAGATCTCCTCTaGGAGAGATGCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGRDLL*ERCMPK
Trigger: CTTTGGCATGCATCTCTCCCAGAGGAGATCTCTCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGGCCAGGCTTCCTTTaGGAAATGTGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGPGFL*EMWSLR
Trigger: CCTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCTCTGCCTCCCTCTCTaGGGCACATCAGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPLCLPL*GTSDCP
Trigger: TGGACAATCTGATGTGCCCCAGAGAGGGAGGCAGAG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCTCCCAGGGCAGGCCTaGTCACATTCCTTCATTTGC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQELPGQA*SHSFIC
Trigger: GCAAATGAAGGAATGTGACCAGGCCTGCCCTGGGAG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCACACTGGAATTCAGTaGGGTGGATCAGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPHTGIQ*GGSAGS
Trigger: GCTTCCTGCTGATCCACCTCACTGAATTCCAGTGTG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGAAAATTATCGTGCATTaGGGCAGGGGATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGKIIVH*GRGCPS
Trigger: GCTGGGACATCCCCTGCCTCAATGCACGATAATTTT...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCTTCTCACACCACTaGACGAAGGCATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGCFSHH*TKAWKR
Trigger: TCTCTTCCATGCCTTCGTGCAGTGGTGTGAGAAGCA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAAGCAGCTGTCTGGTGTaGTCAGATGCAACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSSCLV*SDATPS
Trigger: GCTGGGGGTTGCATCTGAGCACACCAGACAGCTGCT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGAGGGGGCCCTCATGTaGAGGACCAAAGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTEGALM*RTKGLH
Trigger: ATGAAGGCCTTTGGTCCTCCACATGAGGGCCCCCTC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATCCAGGACTTCTCGATaGTCAGGCCACTGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSRTSR*SGHCRH
Trigger: GTGGCGACAGTGGCCTGACCATCGAGAAGTCCTGGA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGGTTCGAATCAGGCTaGGGACATTTCCAAACAGGG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGFESG*GHFQTG
Trigger: CCCTGTTTGGAAATGTCCCCAGCCTGATTCGAACCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGTTCGAATCAGGCTaGGGACATTTCCAAACAGGG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGFESG*GHFQTG
Trigger: CCCTGTTTGGAAATGTCCCCAGCCTGATTCGAACCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTACTTGGTGATGCGCTaGTGGGGCTTGATAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGYLVMR*WGLISK
Trigger: CTTGCTTATCAAGCCCCACCAGCGCATCACCAAGTA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTCCAGGGTGGAGAATaGGCGCAGGTTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTVQGGE*AQVLLH
Trigger: GTGGAGAAGAACCTGCGCCCATTCTCCACCCTGGAC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGCGCAGGGATGTGTaGCCAGCTTTCAGGAACAGA +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGRRDV*PAFRNR
Trigger: TCTGTTCCTGAAAGCTGGCCACACATCCCTGCGCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGGAGAGATCTCCTCTaGGAGAGATGCATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGRDLL*ERCMPK
Trigger: CTTTGGCATGCATCTCTCCCAGAGGAGATCTCTCCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACTGGTCTGGAACTCCTaGGCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTLVWNS*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGAGTTCCAGACCAG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCCTTCATTTGCCTGTaGCCTGAATTACCCCACATA +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSFICL*PELPHI
Trigger: TATGTGGGGTAATTCAGGCCACAGGCAAATGAAGGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGATGTGTCGCAGGAATaGCTCCACGGCTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPDVSQE*LHGFNH
Trigger: ATGATTGAAGCCGTGGAGTCATTCCTGCGACACATC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACCCCATAAGTCTCAATaGGGGAGGCCACGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTPHKSQ*GRPRVL
Trigger: AAGGACTCGTGGCCTCCCGCATTGAGACTTATGGGG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATGCCTGGGATCAAAGTaGCGTAGCCAGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTCLGSK*RSQSLR
Trigger: CCTCAGACTCTGGCTACGGCACTTTGATCCCAGGCA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACTCCTCTGGGAGAGATaGATGCCAAAGGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTLLWER*MPKVLC
Trigger: GCAGAGGACCTTTGGCATGCATCTCTCCCAGAGGAG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGATTACAGGCAGCCATaGCCAGCCAGGGCAGTCATT +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTDYRQP*PARAVI
Trigger: AATGACTGCCCTGGCTGGGCATGGCTGCCTGTAATC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACTCACCTCCAGCTCATaGGCCTTGGTGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTLTSSS*ALVSSL
Trigger: CAAGGAACTCACCAAGGCCCATGAGCTGGAGGTGAG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCACTGCACGAAGGCATaGAAGAGAGGGTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGHCTKA*KRGLVS
Trigger: AGAAACTAACCCTCTCTTCCATGCCTTCGTGCAGTG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATTCCTCAGACCAGGTTaGTGGGTCTTCCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTFLRPG*WVFLGK
Trigger: CTTCCCCAGGAAGACCCACCAACCTGGTCTGAGGAA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGCCAGGCTTCCTTTaGGAAATGTGGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGPGFL*EMWSLR
Trigger: CCTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACACTGTCTTCTGATGGATaGTGGAGGCTCTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTLSSDG*WRLCLP
Trigger: AGGGAGGCAGAGCCTCCACCATCCATCAGAAGACAG...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR TCA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCTCAGGTGCACCTATaGTACATAAATTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWAQVHL*YINLQF
Trigger: GAACTGTAAATTTATGTATCATAGGTGCACCTGAGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCATTTGCCTGTGGCCTaGATTACCCCACATACTTTC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEHLPVA*ITPHTF
Trigger: GAAAGTATGTGGGGTAATTCAGGCCACAGGCAAATG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR TCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATTCTGTGTGAAAGGCTaGAGCCACAGCCACACAGCT +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTFCVKG*SHSHTA
Trigger: AGCTGTGTGGCTGTGGCTTCAGCCTTTCACACAGAA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCTTCCTGGGGAAGACTaGCTCCTTTTAGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQELPGED*LLLGFL
Trigger: AAGGAATCCTAAAAGGAGGCAGTCTTCCCCAGGAAG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTCACATTCCTTCATTTaGCTGTGGCCTGAATTACCC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSHSFI*LWPELP
Trigger: GGGTAATTCAGGCCACAGGCAAATGAAGGAATGTGA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGTGGAATTCAGTGAGGTaGATCAGCAGGAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEWNSVR*ISRKLL
Trigger: CAACAGCTTCCTGCTGATCCACCTCACTGAATTCCA...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATCTGTCACCACCAGGTaGGGGATAATGGTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSVTTR*GIMVEN
Trigger: GTTCTCGACCATTATCCCCCACCTGGTGGTGACAGA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGATGCCAAAGGTCCTCTaGATTCCTCATACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEMPKVL*IPHTSD
Trigger: ATCAGAGGTATGAGGAATGCAGAGGACCTTTGGCAT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCATGCCAAAGGTCCTCTaGATTCCTCATACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPMPKVL*IPHTSD
Trigger: ATCAGAGGTATGAGGAATGCAGAGGACCTTTGGCAT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR GCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGCAGTCATTTTTATaGACAACTTTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGQSFL*TTFCGA
Trigger: AGCCCCACAGAAAGTTGTGCATAAAAATGACTGCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CCA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATTGGTGATGCGCTGGTaGGGCTTGATAAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTLVMRW*GLISKS
Trigger: TGACTTGCTTATCAAGCCCCACCAGCGCATCACCAA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGCTCAGGTGCACCTATaGTACATAAATTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGAQVHL*YINLQF
Trigger: GAACTGTAAATTTATGTATCATAGGTGCACCTGAGC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGCTCAGGTGCACCTATaGTACATAAATTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPAQVHL*YINLQF
Trigger: GAACTGTAAATTTATGTATCATAGGTGCACCTGAGC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR TCA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCTCAGGTGCACCTATaGTACATAAATTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEAQVHL*YINLQF
Trigger: GAACTGTAAATTTATGTATCATAGGTGCACCTGAGC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS CCA 90 bp CGCCGTCGGCTCCCCGGCGATGCCAGCCAGCCCCGATGCCCAGCCTaGGACTGGGATCGAGCGGCCCGCGGGAGCCGGGCAGCGCGGGTC +
Preference number: 5 (lower is better)
Translates to: RRRLPGDASQPRCPA*DWDRAARGSRAARV
Trigger: GACCCGCGCTGCCCGGCTCCCGCGGGCCGCTCGATCCCAGTCCCAGGCTGGGCATCGGGGCTGGCTGGCATCGCCGGGGAGCCGACGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684764.1
CDS GCA 90 bp CGCCTCCCAATAGTCCTCCCTCTGAGGGCGCTGTCTCCCTCGCACTaGTCCCTACCCAGGGTCCTGTCTCAGCCCAGCCCCCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: RLPIVLPLRALSPSH*SLPRVLSQPSPRLP
Trigger: GGGGAGCCGGGGGCTGGGCTGAGACAGGACCCTGGGTAGGGAGCAGTGCGAGGGAGACAGCGCCCTCAGAGGGAGGACTATTGGGAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396988.7
CDS CCA 90 bp CGCTGCTCTGAGAGCCCTCCAGGGAAGGCGTGGAGGGCCTGGTGCTaGGGGACTCCCTGTCCTGGTCCCGATAGAGGGTCAGGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: RCSESPPGKAWRAWC*GTPCPGPDRGSGAP
Trigger: GGGAGCTCCTGACCCTCTATCGGGACCAGGACAGGGAGTCCCCCAGCACCAGGCCCTCCACGCCTTCCCTGGAGGGCTCTCAGAGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS GCA 90 bp ATCACTGGGTGGCTCCAGCACCTCGTAGGGCCCGATGCGTTGTGCTaGAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCTGCCC +
Preference number: 5 (lower is better)
Translates to: ITGWLQHLVGPDALC*SRQALLLFALADLP
Trigger: GGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCCAGTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS TCA 90 bp CGGCCCCCTCAATCCTTTGGCTGGCCAGCTCCTCCCGGATCTCTCTaGGCATGTCCTCAGCCCGCATTGGGCGCAGGGATGTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: RPPQSFGWPAPPGSL*ACPQPALGAGMCGQ
Trigger: CTGGCCACACATCCCTGCGCCCAATGCGGGCTGAGGACATGCTCAGAGAGATCCGGGAGGAGCTGGCCAGCCAAAGGATTGAGGGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS GCA 90 bp TTCTCGATGGTCAGGCCACTGTCGCCACCCTCTCCTATCTCCCAGTaGCGCCGGTCCTCAGGGGGCAGCCGGGGCATCCCAAACATGCTG +
Preference number: 5 (lower is better)
Translates to: FSMVRPLSPPSPISQ*RRSSGGSRGIPNML
Trigger: CAGCATGTTTGGGATGCCCCGGCTGCCCCCTGAGGACCGGCGGCACTGGGAGATAGGAGAGGGTGGCGACAGTGGCCTGACCATCGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS GCA 90 bp CTCATCACTGGGTGGCTCCAGCACCTCGTAGGGCCCGATGCGTTGTaGTGCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCTG +
Preference number: 5 (lower is better)
Translates to: LITGWLQHLVGPDAL*CSRQALLLFALADL
Trigger: CAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCCAGTGATGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS GCA 90 bp AGGCGTCGGCGACTGGGATCATGTGCAGCCTTCTCCCCAGGGGCGTaGAGCCTGCATCCCATCCAGCTGGGAGTGGCTGCCCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: RRRRLGSCAAFSPGA*SLHPIQLGVAALLC
Trigger: ACACAGAAGGGCAGCCACTCCCAGCTGGATGGGATGCAGGCTGCACGCCCCTGGGGAGAAGGCTGCACATGATCCCAGTCGCCGACGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS GCA 90 bp ATCACTGGGTGGCTCCAGCACCTCGTAGGGCCCGATGCGTTGTGCTaGAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCATGGC +
Preference number: 5 (lower is better)
Translates to: ITGWLQHLVGPDALC*SRQALLLFALADHG
Trigger: GCCATGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCCAGTGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543000.1
CDS CCA 90 bp CTCGCAGTCTCATGGGTGACAGGCCTCGGGCCTGGCCAGAACCCCTaGCAAAGGGGACATACTGCTGGAGGCGTCGGCGACTGGGATCCA +
Preference number: 5 (lower is better)
Translates to: LAVSWVTGLGPGQNP*QRGHTAGGVGDWDP
Trigger: TGGATCCCAGTCGCCGACGCCTCCAGCAGTATGTCCCCTTTGCCAGGGGTTCTGGCCAGGCCCGAGGCCTGTCACCCATGAGACTGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000536531.5
ENST00000684764.1
CDS CCA 90 bp GGTGGAACCGCTGGCCAAACGTCAGGAAGCCACTTTGCAGACCAATaGGGTCCAGAGGCTGGCCCGAGGCCCGAGTCTCCTCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: GGTAGQTSGSHFADQ*GPEAGPRPESPPGW
Trigger: CCACCCTGGAGGAGACTCGGGCCTCGGGCCAGCCTCTGGACCCCATTGGTCTGCAAAGTGGCTTCCTGACGTTTGGCCAGCGGTTCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 90 bp AGCTTCTGTAGGGCGGCCTGGGCCTGCTGGGTCTTCTCCAGCCACTaGGCACGGTCTGTAGGACTGGGACAGTGCACAAGGAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SFCRAAWACWVFSSH*ARSVGLGQCTRRAL
Trigger: CAGCGCCCTCCTTGTGCACTGTCCCAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGCCGCCCTACAGAAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 90 bp AGGCTCTGCCTCCCTCTCTGGGCCTGCTGGGTCTTCTCCAGCCACTaGGCACGGTCTGTAGGACTGGGACAGTGCACAAGGAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: RLCLPLWACWVFSSH*ARSVGLGQCTRRAL
Trigger: CAGCGCCCTCCTTGTGCACTGTCCCAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGACCCAGCAGGCCCAGAGAGGGAGGCAGAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544743.1
CDS GCA 90 bp TCTCCACCTCATCACTGGGTGGCTCCAGCACCTCGTAGGGCCCGATaGGTTGTGCTGCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SPPHHWVAPAPRRAR*VVLQPPSSLALRPG
Trigger: GCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCCAGTGATGAGGTGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000543000.1
ENST00000684764.1
CDS GCA 90 bp CTCATCACTGGGTGGCTCCAGCACCTCGTAGGGCCCGATGCGTTGTaGTGCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCAT +
Preference number: 5 (lower is better)
Translates to: LITGWLQHLVGPDAL*CSRQALLLFALADH
Trigger: ATGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCCAGTGATGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543000.1
CDS CCA 90 bp CTCGCAGTCTCATGGGTGACAGGCCTCGGGCCTGGCCAGAACCCCTaGCAAAGGGGACATACTGCTGGAGGCGTCGGCGACTGGGATCAT +
Preference number: 5 (lower is better)
Translates to: LAVSWVTGLGPGQNP*QRGHTAGGVGDWDH
Trigger: ATGATCCCAGTCGCCGACGCCTCCAGCAGTATGTCCCCTTTGCCAGGGGTTCTGGCCAGGCCCGAGGCCTGTCACCCATGAGACTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS CCA 90 bp CTGCCCATGCCTCCCCGTTGCTGGCTTTCCCATACCTGGGCCTGCTaGGTCTTCTCCAGCCACTGGGCACGGTCTGTAGGACTGGGACAG +
Preference number: 5 (lower is better)
Translates to: LPMPPRCWLSHTWAC*VFSSHWARSVGLGQ
Trigger: CTGTCCCAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGTATGGGAAAGCCAGCAACGGGGAGGCATGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535616.1
CDS-3UTR CAA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGGGCGCTTCGGCGTaGAGGAGCTTGGGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: VESQMPEGDQHYWGEISSGGASA*RSLGVG
Trigger: CCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCCC...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS GCA 90 bp GTCGGCGACTGGGATCCAGCACAGGGTATCCTCGGGGATAGAGTCTaGCAGCAGTGCTCTGAGCAGAGGCTCGATGCCGGCCCCCATAAG +
Preference number: 5 (lower is better)
Translates to: VGDWDPAQGILGDRV*QQCSEQRLDAGPHK
Trigger: CTTATGGGGGCCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAGGATACCCTGTGCTGGATCCCAGTCGCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000536531.5
ENST00000684764.1
CDS CCA 90 bp TCATCTCCTTGTGCCCAGGCACCAGCTCCCTCCAGGACTTCTCGATaGTCAGGCCACTGTCGCCACCCTCTCCTATCTCCCAGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: SSPCAQAPAPSRTSR*SGHCRHPLLSPSAA
Trigger: GGCGGCACTGGGAGATAGGAGAGGGTGGCGACAGTGGCCTGACCATCGAGAAGTCCTGGAGGGAGCTGGTGCCTGGGCACAAGGAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 90 bp TGCTGGCTTTCCCATACCTGGGCCTGCTGGGTCTTCTCCAGCCACTaGGCACGGTCTGTAGGACTGGGACAGTGCACAAGGAGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: CWLSHTWACWVFSSH*ARSVGLGQCTRRAL
Trigger: CAGCGCCCTCCTTGTGCACTGTCCCAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGTATGGGAAAGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535616.1
CDS GCA 90 bp TTCCTCCGATTCAGGAGCAGAGGAGGAAACGTTCGCTGTCCCTCCTaGCGCCTCCCAATAGTCCTCCCTCTGAGGGCGCTGTCTCCCTCG +
Preference number: 5 (lower is better)
Translates to: FLRFRSRGGNVRCPS*RLPIVLPLRALSPS
Trigger: CGAGGGAGACAGCGCCCTCAGAGGGAGGACTATTGGGAGGCGGCAGGAGGGACAGCGAACGTTTCCTCCTCTGCTCCTGAATCGGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396988.7
CDS GCA 90 bp CACAGCCTGGACTCACCAGCACAGGGTATCCTCGGGGATAGAGTCTaGCAGCAGTGCTCTGAGCAGAGGCTCGATGCCGGCCCCCATAAG +
Preference number: 5 (lower is better)
Translates to: HSLDSPAQGILGDRV*QQCSEQRLDAGPHK
Trigger: CTTATGGGGGCCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAGGATACCCTGTGCTGGTGAGTCCAGGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538208.1
CDS CCA 90 bp CCGATGCGTTGTGCTGCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTaGCGGACCTGCCCATTGATGTGTCGCAGGAATGACTCCACGGCT +
Preference number: 5 (lower is better)
Translates to: PMRCAAAAKLSCSSP*RTCPLMCRRNDSTA
Trigger: AGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 90 bp CCTCCAGCAGCAGCTGTCTGGTGTGCTCAGATGCAACCCCCAGCATaGGGGACGTCAGGTCCAGGGTGGAGAATGGGCGCAGGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PPAAAVWCAQMQPPA*GTSGPGWRMGAGSS
Trigger: AGAAGAACCTGCGCCCATTCTCCACCCTGGACCTGACGTCCCCCATGCTGGGGGTTGCATCTGAGCACACCAGACAGCTGCTGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGGCATTCAGGGCCTCTaGGGCTCGTGCCTCGGGGCT +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIGIQGL*GSCLGA
Trigger: AGCCCCGAGGCACGAGCCCAAGAGGCCCTGAATGCC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGCCTCGGGGCTCCTCTaGAGCACAGCATGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIASGLL*STAWSS
Trigger: GCTGCTCCATGCTGTGCTCAAGAGGAGCCCCGAGGC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTAGCCGCCAAGCTCTCTaGCTCTTCGCCCTGGCGGAC +
Preference number: 5 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSRQAL*LFALAD
Trigger: GTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCT...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGTAGGGCCCGATGCGTaGTGCTGCAGCCGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIVGPDA*CCSRQA
Trigger: AGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTAC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCGGATGACCTTGGCTTaGTCCGCCTTGCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIRMTLA*SALRWG
Trigger: GCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTGTCCTCAGCCCGCATaGGGCGCAGGGATGTGTGGC +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEICPQPA*GAGMCG
Trigger: GCCACACATCCCTGCGCCCAATGCGGGCTGAGGACA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS GCA 90 bp TGGGATCCAGCACAGGGTATCCTCGGGGATAGAGTCTGCCAGCAGTaGTCTGAGCAGAGGCTCGATGCCGGCCCCCATAAGTCTCAATGC +
Preference number: 5 (lower is better)
Translates to: WDPAQGILGDRVCQQ*SEQRLDAGPHKSQC
Trigger: GCATTGAGACTTATGGGGGCCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAGGATACCCTGTGCTGGATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000536531.5
ENST00000684764.1
CDS GCA 90 bp TGGGTCTTCTCCAGCCACTGGGCACGGTCTGTAGGACTGGGACAGTaGACAAGGAGGGCGCTGGAGACACACTGGAATTCAGTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: WVFSSHWARSVGLGQ*TRRALETHWNSVRW
Trigger: CCACCTCACTGAATTCCAGTGTGTCTCCAGCGCCCTCCTTGTGCACTGTCCCAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000544743.1
ENST00000684764.1
CDS GCA 90 bp GACTCACCAGCACAGGGTATCCTCGGGGATAGAGTCTGCCAGCAGTaGTCTGAGCAGAGGCTCGATGCCGGCCCCCATAAGTCTCAATGC +
Preference number: 5 (lower is better)
Translates to: DSPAQGILGDRVCQQ*SEQRLDAGPHKSQC
Trigger: GCATTGAGACTTATGGGGGCCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAGGATACCCTGTGCTGGTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538208.1
CDS-3UTR CAA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTTCCTGGCTCATCTCCTaGTGCCCAGGCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VESQMPEGDQHYWGEISSSWLIS*CPGTSS
Trigger: GGAGCTGGTGCCTGGGCACAAGGAGATGAGCCAGGA...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS GCA 90 bp TGTGCTGCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCTaGCCATTGATGTGTCGCAGGAATGACTCCACGGCTTCAATCATG +
Preference number: 5 (lower is better)
Translates to: CAAAAKLSCSSPWRT*PLMCRRNDSTASIM
Trigger: CATGATTGAAGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 90 bp TCGGAGGCCCCATCTTCTTCCTCAGACCAGGTTGGTGGGTCTTCCTaGGGAAGACTGCCTCCTTTTAGGATTCCTTCCGGCAGTTCGGGG +
Preference number: 5 (lower is better)
Translates to: SEAPSSSSDQVGGSS*GRLPPFRIPSGSSG
Trigger: CCCCGAACTGCCGGAAGGAATCCTAAAAGGAGGCAGTCTTCCCCAGGAAGACCCACCAACCTGGTCTGAGGAAGAAGATGGGGCCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGCCTTGCGCTGGGGCTaGGTCACAAGGAGCACATCA +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIALRWG*VTRSTS
Trigger: TGATGTGCTCCTTGTGACCAAGCCCCAGCGCAAGGC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGGGGCGCTTCGGCGTaGAGGAGCTTGGGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGGASA*RSLGVG
Trigger: CCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCCC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS TCA 90 bp CAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCTGCCCATTaGTGTGTCGCAGGAATGACTCCACGGCTTCAATCATGGCATTCA +
Preference number: 5 (lower is better)
Translates to: QPPSSLALRPGGPAH*CVAGMTPRLQSWHS
Trigger: TGAATGCCATGATTGAAGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 90 bp TCTGTAGGACTGGGACAGTGCACAAGGAGGGCGCTGGAGACACACTaGAATTCAGTGAGGTGGATCAGCAGGAAGCTGTTGGGGTCTCGC +
Preference number: 5 (lower is better)
Translates to: SVGLGQCTRRALETH*NSVRWISRKLLGSR
Trigger: GCGAGACCCCAACAGCTTCCTGCTGATCCACCTCACTGAATTCCAGTGTGTCTCCAGCGCCCTCCTTGTGCACTGTCCCAGTCCTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000544743.1
ENST00000684764.1
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTGGCGGACCTGCCCATaGATGTGTCGCAGGAATGAC +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIWRTCP*MCRRND
Trigger: GTCATTCCTGCGACACATCAATGGGCAGGTCCGCCA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS CCA 90 bp GCCCCAGCACCTCATCCCAAAAGCTCCGGTGGGTTCGAATCAGGCTaGGGACATTTCCAAACAGGGTCTCAGCTGACACTTCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: APAPHPKSSGGFESG*GHFQTGSQLTLPSA
Trigger: TGCTGATGGAAGTGTCAGCTGAGACCCTGTTTGGAAATGTCCCCAGCCTGATTCGAACCCACCGGAGCTTTTGGGATGAGGTGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS-3UTR CAA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTATGCGCTGGTGGGGCTaGATAAGCAAGTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: VESQMPEGDQHYWGEISSMRWWG*ISKSQS
Trigger: GCTCTGTGACTTGCTTATCAAGCCCCACCAGCGCAT...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGCCCCCTCAATCCTTaGGCTGGCCAGCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGPLNP*AGQLLP
Trigger: CGGGAGGAGCTGGCCAGCCAAAGGATTGAGGGGGCC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTGGGCCAGGCTTCCTTaGGGAAATGTGGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIWARLP*GNVVLE
Trigger: CTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCCA...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCCAGGGTTTCCCTATATaGCCCAGGCTGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIQGFPI*PRLVWN
Trigger: GTTCCAGACCAGCCTGGGCAATATAGGGAAACCCTG...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS GCA 90 bp GGTGACCAGCACTACTGGGGAGAGATCTCCTCTGGGAGAGATGCATaGCAAAGGTCCTCTGCATTCCTCATACCTCTGATGCGGACAGAG +
Preference number: 5 (lower is better)
Translates to: GDQHYWGEISSGRDA*QRSSAFLIPLMRTE
Trigger: CTCTGTCCGCATCAGAGGTATGAGGAATGCAGAGGACCTTTGGCATGCATCTCTCCCAGAGGAGATCTCTCCCCAGTAGTGCTGGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 90 bp GCTGGCACAGTAGCTGGCCAAAGGCTTTTTCTGTCTTCTGATGGATaGTGGAGGCTCTGCCTCCCTCTCTGGGGCACATCAGATTGTCCA +
Preference number: 5 (lower is better)
Translates to: AGTVAGQRLFLSSDG*WRLCLPLWGTSDCP
Trigger: TGGACAATCTGATGTGCCCCAGAGAGGGAGGCAGAGCCTCCACCATCCATCAGAAGACAGAAAAAGCCTTTGGCCAGCTACTGTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR CAA 90 bp CTTGAGGTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCGAGAGGGTTAGTTTCTaGCTGTTCTCGGGCGTAAGC +
Preference number: 5 (lower is better)
Translates to: LEVESQMPEGDQHYWGEIERVSF*LFSGVS
Trigger: GCTTACGCCCGAGAACAGCAAGAAACTAACCCTCTC...GATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTACCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGCCTCGGGGCTCCTCTaGAGCACAGCATGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWASGLL*STAWSS
Trigger: GCTGCTCCATGCTGTGCTCAAGAGGAGCCCCGAGGC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGGGCGCTTCGGCGTaGAGGAGCTTGGGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGGASA*RSLGVG
Trigger: CCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTGTCCTCAGCCCGCATaGGGCGCAGGGATGTGTGGC +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWCPQPA*GAGMCG
Trigger: GCCACACATCCCTGCGCCCAATGCGGGCTGAGGACA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGCCCCCTCAATCCTTaGGCTGGCCAGCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGPLNP*AGQLLP
Trigger: CGGGAGGAGCTGGCCAGCCAAAGGATTGAGGGGGCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGAGGCCACGAGTCCTaGGAGGGGGCCCTCATGTGG +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGGHES*EGALMW
Trigger: CCACATGAGGGCCCCCTCCAAGGACTCGTGGCCTCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGCATTCAGGGCCTCTaGGGCTCGTGCCTCGGGGCT +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGIQGL*GSCLGA
Trigger: AGCCCCGAGGCACGAGCCCAAGAGGCCCTGAATGCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCGGATGACCTTGGCTTaGTCCGCCTTGCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGRMTLA*SALRWG
Trigger: GCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGGGTCGGATGACCTaGGCTTTGTCCGCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGGRMT*ALSALR
Trigger: GCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGGGGGTCTCGCAGGGGTaGGCACACGAGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGGVSQG*AHELLQ
Trigger: CTGGAGAAGCTCGTGTGCCAACCCCTGCGAGACCCC...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGGGCGCTTCGGCGTaGAGGAGCTTGGGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGGASA*RSLGVG
Trigger: CCCGACCCCCAAGCTCCTCAACGCCGAAGCGCCCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGCCCCCTCAATCCTTaGGCTGGCCAGCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGPLNP*AGQLLP
Trigger: CGGGAGGAGCTGGCCAGCCAAAGGATTGAGGGGGCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCCTCGGGGCTCCTCTaGAGCACAGCATGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEASGLL*STAWSS
Trigger: GCTGCTCCATGCTGTGCTCAAGAGGAGCCCCGAGGC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTGGCGGACCTGCCCATaGATGTGTCGCAGGAATGAC +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWWRTCP*MCRRND
Trigger: GTCATTCCTGCGACACATCAATGGGCAGGTCCGCCA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGTAGGGCCCGATGCGTaGTGCTGCAGCCGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPVGPDA*CCSRQA
Trigger: AGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTAC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCGGATGACCTTGGCTTaGTCCGCCTTGCGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPRMTLA*SALRWG
Trigger: GCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGGGGGTCGGATGACCTaGGCTTTGTCCGCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEGGRMT*ALSALR
Trigger: GCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGGGGTCTCGCAGGGGTaGGCACACGAGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPGVSQG*AHELLQ
Trigger: CTGGAGAAGCTCGTGTGCCAACCCCTGCGAGACCCC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTGTCCTCAGCCCGCATaGGGCGCAGGGATGTGTGGC +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPCPQPA*GAGMCG
Trigger: GCCACACATCCCTGCGCCCAATGCGGGCTGAGGACA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGAGGCCACGAGTCCTaGGAGGGGGCCCTCATGTGG +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGGHES*EGALMW
Trigger: CCACATGAGGGCCCCCTCCAAGGACTCGTGGCCTCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000011684.11
ENST00000396988.7
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTCCCAGAGCGCTaGTGCTTCTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGCLPER*CFSHHC
Trigger: GCAGTGGTGTGAGAAGCACAAGCGCTCTGGGAGGCA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGTCCAGCTCATGGGCCTaGGTGAGTTCCTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWSSSWA*VSSLSL
Trigger: CAAACTCAAGGAACTCACCAAGGCCCATGAGCTGGA...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTGCCTCCCAGAGCGCTaGTGCTTCTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPCLPER*CFSHHC
Trigger: GCAGTGGTGTGAGAAGCACAAGCGCTCTGGGAGGCA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAAGCCGCCAAGCTCTCTaGCTCTTCGCCCTGGCGGAC +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTSRQAL*LFALAD
Trigger: GTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCCTTGCGCTGGGGCTaGGTCACAAGGAGCACATCA +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEALRWG*VTRSTS
Trigger: TGATGTGCTCCTTGTGACCAAGCCCCAGCGCAAGGC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGGGTCGGATGACCTaGGCTTTGTCCGCCTTGCGC +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGGRMT*ALSALR
Trigger: GCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGGGGTCTCGCAGGGGTaGGCACACGAGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTGVSQG*AHELLQ
Trigger: CTGGAGAAGCTCGTGTGCCAACCCCTGCGAGACCCC...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGATCAGCAGGAAGCTGTaGGGGTCTCGCAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEISRKL*GSRRGW
Trigger: CCAACCCCTGCGAGACCCCAACAGCTTCCTGCTGAT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCATCAGCAGGAAGCTGTaGGGGTCTCGCAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPISRKL*GSRRGW
Trigger: CCAACCCCTGCGAGACCCCAACAGCTTCCTGCTGAT...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GTAGAGTCACAGATGCCGGAGGGTGACCAGCACTACTGGGGAGAGATCTCCTCTATAAATTTACAGTTCTaGATCCCCAAACAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VESQMPEGDQHYWGEISSINLQF*IPKQSR
Trigger: CCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTAT...AGAGGAGATCTCTCCCCAGTAGTGCTGGTCACCCTCCGGCATCTGTGACTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGAGGGGATGCTGTATCTaGGGCTCTCCCAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQERGCCI*GSPSGW
Trigger: CCAGCCACTGGGAGAGCCCAAGATACAGCATCCCCT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCGTCAGGAAGCCACTTaGCAGACCAATGGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQERQEAT*QTNGVQ
Trigger: CTGGACCCCATTGGTCTGCAAAGTGGCTTCCTGACG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCAGGGTTTCCCTATATaGCCCAGGCTGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGQGFPI*PRLVWN
Trigger: GTTCCAGACCAGCCTGGGCAATATAGGGAAACCCTG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGGGACACCCTGAACCTTaGCTCATCTTCATCCTGACT +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWGHPEP*LIFILT
Trigger: AGTCAGGATGAAGATGAGCAAAGGTTCAGGGTGTCC...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTCCACACCCCTCTGCTaGGTTAGGACTGGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPSTPLC*VRTGGE
Trigger: CTCTCCTCCAGTCCTAACCAAGCAGAGGGGTGTGGA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTCCAGCTCATGGGCCTaGGTGAGTTCCTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGSSSWA*VSSLSL
Trigger: CAAACTCAAGGAACTCACCAAGGCCCATGAGCTGGA...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATGCCTCCCAGAGCGCTaGTGCTTCTCACACCACTGC +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTCLPER*CFSHHC
Trigger: GCAGTGGTGTGAGAAGCACAAGCGCTCTGGGAGGCA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGATGCGCTGGTGGGGCTaGATAAGCAAGTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEMRWWG*ISKSQS
Trigger: GCTCTGTGACTTGCTTATCAAGCCCCACCAGCGCAT...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAATCAGCAGGAAGCTGTaGGGGTCTCGCAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTISRKL*GSRRGW
Trigger: CCAACCCCTGCGAGACCCCAACAGCTTCCTGCTGAT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCTGGGCCAGGCTTCCTTaGGGAAATGTGGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPWARLP*GNVVLE
Trigger: CTCAAGGACCACATTTCCCAAAGGAAGCCTGGCCCA...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCAGGGTTTCCCTATATaGCCCAGGCTGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEQGFPI*PRLVWN
Trigger: GTTCCAGACCAGCCTGGGCAATATAGGGAAACCCTG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAGGGTTTCCCTATATaGCCCAGGCTGGTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPQGFPI*PRLVWN
Trigger: GTTCCAGACCAGCCTGGGCAATATAGGGAAACCCTG...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGAGAGGGTTAGTTTCTaGCTGTTCTCGGGCGTAAGC +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEERVSF*LFSGVS
Trigger: GCTTACGCCCGAGAACAGCAAGAAACTAACCCTCTC...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCGAGAGGGTTAGTTTCTaGCTGTTCTCGGGCGTAAGC +
Preference number: 5 (lower is better)
Translates to: FLWGSGAPMIHKFTVLDPERVSF*LFSGVS
Trigger: GCTTACGCCCGAGAACAGCAAGAAACTAACCCTCTC...GGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACATGGCGGACCTGCCCATaGATGTGTCGCAGGAATGAC +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTWRTCP*MCRRND
Trigger: GTCATTCCTGCGACACATCAATGGGCAGGTCCGCCA...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAATGCGCTGGTGGGGCTaGATAAGCAAGTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTMRWWG*ISKSQS
Trigger: GCTCTGTGACTTGCTTATCAAGCCCCACCAGCGCAT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp CCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGCTGGGGCACATCAGATaGTCCAGTCTGAAACTGAAT +
Preference number: 5 (lower is better)
Translates to: PMIHKFTVLDPQTEQEAGLGHIR*SSLKLN
Trigger: ATTCAGTTTCAGACTGGACAATCTGATGTGCCCCAG...CCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS-3UTR CAA 90 bp GGTGCACCTATGATACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGCAAAATTATCGTGCATaGAGGCAGGGGATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GAPMIHKFTVLDPQTEQEQNYRA*RQGMSQ
Trigger: CTGGGACATCCCCTGCCTCAATGCACGATAATTTTG...CTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTATCATAGGTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS-3UTR CAA 90 bp TACATAAATTTACAGTTCTTGATCCCCAAACAGAGCAGGAGGCAGGGTGCCTGGATAAATTTACAGTTCTaGATCCCCAAACAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: YINLQFLIPKQSRRQGAWINLQF*IPKQSR
Trigger: CCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTAT...CCAGGCACCCTGCCTCCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS-3UTR CAA 90 bp TTTATGCACAACTTTCTGTGGGGCTCAGGTGCACCTATGATACATAAATTTACAATAAATTTACAGTTCTaGATCCCCAAACAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: FMHNFLWGSGAPMIHKFTINLQF*IPKQSR
Trigger: CCTGCTCTGTTTGGGGATCAAGAACTGTAAATTTAT...TGTAAATTTATGTATCATAGGTGCACCTGAGCCCCACAGAAAGTTGTGCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
CDS CCA 72 bp CTCCCCGGCGATGCCAGCCAGCCCCGATGCCCAGCCTaGGACTGGGATCGAGCGGCCCGCGGGAGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: LPGDASQPRCPA*DWDRAARGSRA
Trigger: TGCCCGGCTCCCGCGGGCCGCTCGATCCCAGTCCCAGGCTGGGCATCGGGGCTGGCTGGCATCGCCGGGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684764.1
CDS GCA 72 bp GTCAGGCCACTGTCGCCACCCTCTCCTATCTCCCAGTaGCGCCGGTCCTCAGGGGGCAGCCGGGGCATCCCA +
Preference number: 6 (lower is better)
Translates to: VRPLSPPSPISQ*RRSSGGSRGIP
Trigger: TGGGATGCCCCGGCTGCCCCCTGAGGACCGGCGGCACTGGGAGATAGGAGAGGGTGGCGACAGTGGCCTGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp CCGCATCCTCTGCAGCTGGGCCCGAGTCAGCTTCCGTaGCCTGCTGTCCCGGGGCTCCTCGGCCCCCTCAAT +
Preference number: 6 (lower is better)
Translates to: PHPLQLGPSQLP*PAVPGLLGPLN
Trigger: ATTGAGGGGGCCGAGGAGCCCCGGGACAGCAGGCCACGGAAGCTGACTCGGGCCCAGCTGCAGAGGATGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 72 bp GAGAAGGTGAGGCGAGGGTCCCGCCGAAGGGCTCTTTaGCGTAGACGGCTCAGTGGGGAGCGGGACCCCGTG +
Preference number: 6 (lower is better)
Translates to: EKVRRGSRRRAL*RRRLSGERDPV
Trigger: CACGGGGTCCCGCTCCCCACTGAGCCGTCTACGCCAAAGAGCCCTTCGGCGGGACCCTCGCCTCACCTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS GCA 72 bp TCTGAGAGCCCTCCAGGGAAGGCGTGGAGGGCCTGGTaGTGGGGGACTCCCTGTCCTGGTCCCGATAGAGGG +
Preference number: 6 (lower is better)
Translates to: SESPPGKAWRAW*WGTPCPGPDRG
Trigger: CCCTCTATCGGGACCAGGACAGGGAGTCCCCCAGCACCAGGCCCTCCACGCCTTCCCTGGAGGGCTCTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 72 bp AGGAAGCCACTTTGCAGACCAATGGGGTCCAGAGGCTaGCCCGAGGCCCGAGTCTCCTCCAGGGTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: RKPLCRPMGSRG*PEARVSSRVGP
Trigger: GGGGCCCACCCTGGAGGAGACTCGGGCCTCGGGCCAGCCTCTGGACCCCATTGGTCTGCAAAGTGGCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp GAGAGCCCTCCAGGGAAGGCGTGGAGGGCCTGGTGCTaGGGGACTCCCTGTCCTGGTCCCGATAGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: ESPPGKAWRAWC*GTPCPGPDRGS
Trigger: TGACCCTCTATCGGGACCAGGACAGGGAGTCCCCCAGCACCAGGCCCTCCACGCCTTCCCTGGAGGGCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 72 bp CCGGCAGAGTCAGCATGGGTTGGGGAGGAGGGAAGCTaGCCCCGAAGCCGGGCCCTGTGGAGTGTTTCCACC +
Preference number: 6 (lower is better)
Translates to: PAESAWVGEEGS*PRSRALWSVST
Trigger: GGTGGAAACACTCCACAGGGCCCGGCTTCGGGGCCAGCTTCCCTCCTCCCCAACCCATGCTGACTCTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS GCA 72 bp TGGCTCCAGCACCTCGTAGGGCCCGATGCGTTGTGCTaGAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCG +
Preference number: 6 (lower is better)
Translates to: WLQHLVGPDALC*SRQALLLFALA
Trigger: CGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000543000.1
ENST00000684764.1
CDS GCA 72 bp GGGTGGCTCCAGCACCTCGTAGGGCCCGATGCGTTGTaGTGCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTG +
Preference number: 6 (lower is better)
Translates to: GWLQHLVGPDAL*CSRQALLLFAL
Trigger: CAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000543000.1
ENST00000684764.1
CDS GCA 72 bp ATAGTCCTCCCTCTGAGGGCGCTGTCTCCCTCGCACTaGTCCCTACCCAGGGTCCTGTCTCAGCCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: IVLPLRALSPSH*SLPRVLSQPSP
Trigger: GGGGCTGGGCTGAGACAGGACCCTGGGTAGGGAGCAGTGCGAGGGAGACAGCGCCCTCAGAGGGAGGACTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396988.7
CDS GCA 72 bp GGCCCGATGCGTTGTGCTGCAGCCGCCAAGCTCTCTTaGTCTTCGCCCTGGCGGACCATGGCATTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GPMRCAAAAKLS*SSPWRTMAFRA
Trigger: GGCCCTGAATGCCATGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543000.1
CDS CCA 72 bp TCATGGGTGACAGGCCTCGGGCCTGGCCAGAACCCCTaGCAAAGGGGACATACTGCTGGAGGCGTCGGCGAC +
Preference number: 6 (lower is better)
Translates to: SWVTGLGPGQNP*QRGHTAGGVGD
Trigger: GTCGCCGACGCCTCCAGCAGTATGTCCCCTTTGCCAGGGGTTCTGGCCAGGCCCGAGGCCTGTCACCCATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp CGTGCCTCTTCTCGGGCTCTGGATCTCGCAGTCTCATaGGTGACAGGCCTCGGGCCTGGCCAGAACCCCTGG +
Preference number: 6 (lower is better)
Translates to: RASSRALDLAVS*VTGLGPGQNPW
Trigger: CCAGGGGTTCTGGCCAGGCCCGAGGCCTGTCACCCATGAGACTGCGAGATCCAGAGCCCGAGAAGAGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp CTGCTGTCCCGGGGCTCCTCGGCCCCCTCAATCCTTTaGCTGGCCAGCTCCTCCCGGATCTCTCTGAGCATG +
Preference number: 6 (lower is better)
Translates to: LLSRGSSAPSIL*LASSSRISLSM
Trigger: CATGCTCAGAGAGATCCGGGAGGAGCTGGCCAGCCAAAGGATTGAGGGGGCCGAGGAGCCCCGGGACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 72 bp CTGCCCATGCCTCCCCGTTGCTGGCTTTCCCATACCTaGGCCTGCTGGGTCTTCTCCAGCCACTGGGCACGG +
Preference number: 6 (lower is better)
Translates to: LPMPPRCWLSHT*ACWVFSSHWAR
Trigger: CCGTGCCCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGTATGGGAAAGCCAGCAACGGGGAGGCATGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535616.1
CDS CAA 72 bp GGGCCCGATGCGTTGTGCTGCAGCCGCCAAGCTCTCTaGCTCTTCGCCCTGGCGGACCATGGCATTCAGGGC +
Preference number: 6 (lower is better)
Translates to: GPDALCCSRQAL*LFALADHGIQG
Trigger: GCCCTGAATGCCATGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543000.1
CDS CAA 90 bp CACCTCATCACTGGGTGGCTCCAGCACCTCGTAGGGCCCGATGCGTaGTGCTGCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGAC +
Preference number: 6 (lower is better)
Translates to: HLITGWLQHLVGPDA*CCSRQALLLFALAD
Trigger: GTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCCAGTGATGAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000543000.1
ENST00000684764.1
CDS CAA 72 bp GGGGTGGAACCGCTGGCCAAACGTCAGGAAGCCACTTaGCAGACCAATGGGGTCCAGAGGCTGGCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: GVEPLAKRQEAT*QTNGVQRLARG
Trigger: GCCTCGGGCCAGCCTCTGGACCCCATTGGTCTGCAAAGTGGCTTCCTGACGTTTGGCCAGCGGTTCCACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CAA 72 bp GGGCCCGATGCGTTGTGCTGCAGCCGCCAAGCTCTCTaGCTCTTCGCCCTGGCGGACCTGCCCATTGATGTG +
Preference number: 6 (lower is better)
Translates to: GPDALCCSRQAL*LFALADLPIDV
Trigger: CACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CAA 72 bp ACTGGGTGGCTCCAGCACCTCGTAGGGCCCGATGCGTaGTGCTGCAGCCGCCAAGCTCTCTTGCTCTTCGCC +
Preference number: 6 (lower is better)
Translates to: TGWLQHLVGPDA*CCSRQALLLFA
Trigger: GGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTGCTGGAGCCACCCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000543000.1
ENST00000684764.1
CDS GCA 72 bp GGCCCGATGCGTTGTGCTGCAGCCGCCAAGCTCTCTTaGTCTTCGCCCTGGCGGACCTGCCCATTGATGTGT +
Preference number: 6 (lower is better)
Translates to: GPMRCAAAAKLS*SSPWRTCPLMC
Trigger: ACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp AGCTCGGTGGTCAGGAGCTCCCACAGGGCCTCCTGTTaGTGGCAGAGCTCCTGGCTCATCTCCTTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: SSVVRSSHRASC*WQSSWLISLCP
Trigger: TGGGCACAAGGAGATGAGCCAGGAGCTCTGCCACCAACAGGAGGCCCTGTGGGAGCTCCTGACCACCGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp GCTGGCCAAACGTCAGGAAGCCACTTTGCAGACCAATaGGGTCCAGAGGCTGGCCCGAGGCCCGAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: AGQTSGSHFADQ*GPEAGPRPESP
Trigger: AGGAGACTCGGGCCTCGGGCCAGCCTCTGGACCCCATTGGTCTGCAAAGTGGCTTCCTGACGTTTGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp GCAGCTGTCTGGTGTGCTCAGATGCAACCCCCAGCATaGGGGACGTCAGGTCCAGGGTGGAGAATGGGCGCA +
Preference number: 6 (lower is better)
Translates to: AAVWCAQMQPPA*GTSGPGWRMGA
Trigger: TGCGCCCATTCTCCACCCTGGACCTGACGTCCCCCATGCTGGGGGTTGCATCTGAGCACACCAGACAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp GCTGAGGGACAGACCTGGCTTCCACACCCCTCTGCTTaGTTAGGACTGGAGGAGAGCCAGGCAGGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: AEGQTWLPHPSA*LGLEESQAGGA
Trigger: GGCTCCACCTGCCTGGCTCTCCTCCAGTCCTAACCAAGCAGAGGGGTGTGGAAGCCAGGTCTGTCCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS CAA 90 bp CACCTCGTAGGGCCCGATGCGTTGTGCTGCAGCCGCCAAGCTCTCTaGCTCTTCGCCCTGGCGGACCTGCCCATTGATGTGTCGCAGGAA +
Preference number: 6 (lower is better)
Translates to: HLVGPDALCCSRQAL*LFALADLPIDVSQE
Trigger: TTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGCAGCACAACGCATCGGGCCCTACGAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CAA 90 bp TCGATGCCGGCCCCCATAAGTCTCAATGCGGGAGGCCACGAGTCCTaGGAGGGGGCCCTCATGTGGAGGACCAAAGGCCTTCATCCCTTC +
Preference number: 6 (lower is better)
Translates to: SMPAPISLNAGGHES*EGALMWRTKGLHPF
Trigger: GAAGGGATGAAGGCCTTTGGTCCTCCACATGAGGGCCCCCTCCAAGGACTCGTGGCCTCCCGCATTGAGACTTATGGGGGCCGGCATCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000536531.5
ENST00000538208.1
ENST00000684764.1
CDS TCA 72 bp CAATCCTTTGGCTGGCCAGCTCCTCCCGGATCTCTCTaGGCATGTCCTCAGCCCGCATTGGGCGCAGGGATG +
Preference number: 6 (lower is better)
Translates to: QSFGWPAPPGSL*ACPQPALGAGM
Trigger: CATCCCTGCGCCCAATGCGGGCTGAGGACATGCTCAGAGAGATCCGGGAGGAGCTGGCCAGCCAAAGGATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS GCA 72 bp GCACAGGGTATCCTCGGGGATAGAGTCTGCCAGCAGTaGTCTGAGCAGAGGCTCGATGCCGGCCCCCATAAG +
Preference number: 6 (lower is better)
Translates to: AQGILGDRVCQQ*SEQRLDAGPHK
Trigger: CTTATGGGGGCCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAGGATACCCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000536531.5
ENST00000538208.1
ENST00000684764.1
CDS GCA 72 bp TGGGATCCAGCACAGGGTATCCTCGGGGATAGAGTCTaGCAGCAGTGCTCTGAGCAGAGGCTCGATGCCGGC +
Preference number: 6 (lower is better)
Translates to: WDPAQGILGDRV*QQCSEQRLDAG
Trigger: GCCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAGGATACCCTGTGCTGGATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000536531.5
ENST00000684764.1
CDS GCA 72 bp GCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCTaGCCATTGATGTGTCGCAGGAATGACTCCACGGCT +
Preference number: 6 (lower is better)
Translates to: AAKLSCSSPWRT*PLMCRRNDSTA
Trigger: AGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS GCA 72 bp GGGAGCGGGACCCCGTGGGGGTGCCTGGGATCAAAGTaGCGTAGCCAGAGTCTGAGGTATCATCTGGCACAA +
Preference number: 6 (lower is better)
Translates to: GSGTPWGCLGSK*RSQSLRYHLAQ
Trigger: TTGTGCCAGATGATACCTCAGACTCTGGCTACGGCACTTTGATCCCAGGCACCCCCACGGGGTCCCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS GCA 72 bp TTCAGGAGCAGAGGAGGAAACGTTCGCTGTCCCTCCTaGCGCCTCCCAATAGTCCTCCCTCTGAGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: FRSRGGNVRCPS*RLPIVLPLRAL
Trigger: CAGCGCCCTCAGAGGGAGGACTATTGGGAGGCGGCAGGAGGGACAGCGAACGTTTCCTCCTCTGCTCCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396988.7
CDS GCA 72 bp GACTCACCAGCACAGGGTATCCTCGGGGATAGAGTCTaGCAGCAGTGCTCTGAGCAGAGGCTCGATGCCGGC +
Preference number: 6 (lower is better)
Translates to: DSPAQGILGDRV*QQCSEQRLDAG
Trigger: GCCGGCATCGAGCCTCTGCTCAGAGCACTGCTGGCAGACTCTATCCCCGAGGATACCCTGTGCTGGTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538208.1
CDS GCA 72 bp GGGACAGAGACTCCACAGCCTAGGTGTCTTCCCTCCTaGCCCACCAGGTCACTTTTGGGGCACAGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: GTETPQPRCLPS*PTRSLLGHSLD
Trigger: GTCCAGGCTGTGCCCCAAAAGTGACCTGGTGGGGCAGGAGGGAAGACACCTAGGCTGTGGAGTCTCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538208.1
CDS CCA 72 bp TCCCATACCTGGGCCTGCTGGGTCTTCTCCAGCCACTaGGCACGGTCTGTAGGACTGGGACAGTGCACAAGG +
Preference number: 6 (lower is better)
Translates to: SHTWACWVFSSH*ARSVGLGQCTR
Trigger: CCTTGTGCACTGTCCCAGTCCTACAGACCGTGCCCAGTGGCTGGAGAAGACCCAGCAGGCCCAGGTATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535616.1
CDS CAA 72 bp GCCCCCATAAGTCTCAATGCGGGAGGCCACGAGTCCTaGGAGGGGGCCCTCATGTGGAGGACCAAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: APISLNAGGHES*EGALMWRTKGL
Trigger: AAGGCCTTTGGTCCTCCACATGAGGGCCCCCTCCAAGGACTCGTGGCCTCCCGCATTGAGACTTATGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000536531.5
ENST00000538208.1
ENST00000684764.1
CDS CAA 90 bp GGTTGGCACACGAGCTTCTCCAGCATGAGAGGGGGTCGGATGACCTaGGCTTTGTCCGCCTTGCGCTGGGGCTTGGTCACAAGGAGCACA +
Preference number: 6 (lower is better)
Translates to: GWHTSFSSMRGGRMT*ALSALRWGLVTRST
Trigger: TGTGCTCCTTGTGACCAAGCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCCTCTCATGCTGGAGAAGCTCGTGTGCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000536531.5
ENST00000544743.1
ENST00000684764.1
CDS GCA 72 bp GTCTCAGCTGACACTTCCATCAGCAGTCCCACTCGCTaGAGGTTCAGCAGGCCGGCGGCTAGCAGATCAGTC +
Preference number: 6 (lower is better)
Translates to: VSADTSISSPTR*RFSRPAASRSV
Trigger: GACTGATCTGCTAGCCGCCGGCCTGCTGAACCTGCAGCGAGTGGGACTGCTGATGGAAGTGTCAGCTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp ATGCAACCCCCAGCATGGGGGACGTCAGGTCCAGGGTaGAGAATGGGCGCAGGTTCTTCTCCACCTCATCAC +
Preference number: 6 (lower is better)
Translates to: MQPPAWGTSGPG*RMGAGSSPPHH
Trigger: GTGATGAGGTGGAGAAGAACCTGCGCCCATTCTCCACCCTGGACCTGACGTCCCCCATGCTGGGGGTTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000543000.1
ENST00000684764.1
CDS CCA 72 bp AGCATGTCCTCAGCCCGCATTGGGCGCAGGGATGTGTaGCCAGCTTTCAGGAACAGAGGCCCCTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SMSSARIGRRDV*PAFRNRGPSSS
Trigger: GGAAGAAGAGGGGCCTCTGTTCCTGAAAGCTGGCCACACATCCCTGCGCCCAATGCGGGCTGAGGACATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 72 bp GCTTCTGTAGGGCGGCCTTCAGGGGATGCTGTATCTTaGGCTCTCCCAGTGGCTGGCACAGTAGCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: ASVGRPSGDAVS*ALPVAGTVAGQ
Trigger: TTGGCCAGCTACTGTGCCAGCCACTGGGAGAGCCCAAGATACAGCATCCCCTGAAGGCCGCCCTACAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS CAA 72 bp TTCTCCAGCATGAGAGGGGGTCGGATGACCTTGGCTTaGTCCGCCTTGCGCTGGGGCTTGGTCACAAGGAGC +
Preference number: 6 (lower is better)
Translates to: FSSMRGGRMTLA*SALRWGLVTRS
Trigger: GCTCCTTGTGACCAAGCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCCTCTCATGCTGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000536531.5
ENST00000544743.1
ENST00000684764.1
CDS CAA 72 bp ACGAGCTTCTCCAGCATGAGAGGGGGTCGGATGACCTaGGCTTTGTCCGCCTTGCGCTGGGGCTTGGTCACA +
Preference number: 6 (lower is better)
Translates to: TSFSSMRGGRMT*ALSALRWGLVT
Trigger: TGTGACCAAGCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCCTCTCATGCTGGAGAAGCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000536531.5
ENST00000544743.1
ENST00000684764.1
CDS CAA 72 bp AGCTTCTGTAGGGCGGCCTTCAGGGGATGCTGTATCTaGGGCTCTCCCAGTGGCTGGCACAGTAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: SFCRAAFRGCCI*GSPSGWHSSWP
Trigger: TGGCCAGCTACTGTGCCAGCCACTGGGAGAGCCCAAGATACAGCATCCCCTGAAGGCCGCCCTACAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS CAA 90 bp CACACGAGCTTCTCCAGCATGAGAGGGGGTCGGATGACCTTGGCTTaGTCCGCCTTGCGCTGGGGCTTGGTCACAAGGAGCACATCAGAG +
Preference number: 6 (lower is better)
Translates to: HTSFSSMRGGRMTLA*SALRWGLVTRSTSE
Trigger: CTCTGATGTGCTCCTTGTGACCAAGCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCCTCTCATGCTGGAGAAGCTCGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000536531.5
ENST00000544743.1
ENST00000684764.1
CDS TCA 72 bp GCCCTGGCGGACCTGCCCATTGATGTGTCGCAGGAATaGCTCCACGGCTTCAATCATGGCATTCAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ALADLPIDVSQE*LHGFNHGIQGL
Trigger: GAGGCCCTGAATGCCATGATTGAAGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS GCA 72 bp TCCAGCCACTGGGCACGGTCTGTAGGACTGGGACAGTaGACAAGGAGGGCGCTGGAGACACACTGGAATTCA +
Preference number: 6 (lower is better)
Translates to: SSHWARSVGLGQ*TRRALETHWNS
Trigger: TGAATTCCAGTGTGTCTCCAGCGCCCTCCTTGTGCACTGTCCCAGTCCTACAGACCGTGCCCAGTGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000544743.1
ENST00000684764.1
CDS GCA 72 bp CCTCAGACCAGGTTGGTGGGTCTTCCTGGGGAAGACTaGCTCCTTTTAGGATTCCTTCCGGCAGTTCGGGGG +
Preference number: 6 (lower is better)
Translates to: PQTRLVGLPGED*LLLGFLPAVRG
Trigger: CCCCCGAACTGCCGGAAGGAATCCTAAAAGGAGGCAGTCTTCCCCAGGAAGACCCACCAACCTGGTCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CAA 72 bp ATGAGAGGGGGTCGGATGACCTTGGCTTTGTCCGCCTaGCGCTGGGGCTTGGTCACAAGGAGCACATCAGAG +
Preference number: 6 (lower is better)
Translates to: MRGGRMTLALSA*RWGLVTRSTSE
Trigger: CTCTGATGTGCTCCTTGTGACCAAGCCCCAGCGCAAGGCGGACAAAGCCAAGGTCATCCGACCCCCTCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000536531.5
ENST00000544743.1
ENST00000684764.1
CDS CAA 90 bp GCAGCCGCCAAGCTCTCTTGCTCTTCGCCCTGGCGGACCTGCCCATaGATGTGTCGCAGGAATGACTCCACGGCTTCAATCATGGCATTC +
Preference number: 6 (lower is better)
Translates to: AAAKLSCSSPWRTCP*MCRRNDSTASIMAF
Trigger: GAATGCCATGATTGAAGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTTGGCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS TCA 72 bp GCACAAGGAGGGCGCTGGAGACACACTGGAATTCAGTaGGGTGGATCAGCAGGAAGCTGTTGGGGTCTCGCA +
Preference number: 6 (lower is better)
Translates to: AQGGRWRHTGIQ*GGSAGSCWGLA
Trigger: TGCGAGACCCCAACAGCTTCCTGCTGATCCACCTCACTGAATTCCAGTGTGTCTCCAGCGCCCTCCTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000535616.1
ENST00000544743.1
ENST00000684764.1
CDS CAA 72 bp GTGGAGGCTCTGCCTCCCTCTCTGGGGCACATCAGATaGTCCAGTCTGAAACTGAATCCACCCCAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: VEALPPSLGHIR*SSLKLNPPQPL
Trigger: GAGAGGCTGGGGTGGATTCAGTTTCAGACTGGACAATCTGATGTGCCCCAGAGAGGGAGGCAGAGCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS TCA 72 bp AGCTCTCTTGCTCTTCGCCCTGGCGGACCTGCCCATTaGTGTGTCGCAGGAATGACTCCACGGCTTCAATCA +
Preference number: 6 (lower is better)
Translates to: SSLALRPGGPAH*CVAGMTPRLQS
Trigger: TGATTGAAGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS TCA 72 bp GGGGGTGCCTGGGATCAAAGTGCCGTAGCCAGAGTCTaGGGTATCATCTGGCACAAGGGGAGCATCTTCATC +
Preference number: 6 (lower is better)
Translates to: GGAWDQSAVARV*GIIWHKGSIFI
Trigger: GATGAAGATGCTCCCCTTGTGCCAGATGATACCTCAGACTCTGGCTACGGCACTTTGATCCCAGGCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CAA 72 bp AAGCTCTCTTGCTCTTCGCCCTGGCGGACCTGCCCATaGATGTGTCGCAGGAATGACTCCACGGCTTCAATC +
Preference number: 6 (lower is better)
Translates to: KLSCSSPWRTCP*MCRRNDSTASI
Trigger: GATTGAAGCCGTGGAGTCATTCCTGCGACACATCAATGGGCAGGTCCGCCAGGGCGAAGAGCAAGAGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp GGAGCATCTTCATCTGTGTCTTCTGTCACCACCAGGTaGGGGATAATGGTCGAGAACTCAGGAGTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: GASSSVSSVTTR*GIMVENSGVLP
Trigger: GGGGAGGACTCCTGAGTTCTCGACCATTATCCCCCACCTGGTGGTGACAGAAGACACAGATGAAGATGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000304581.8
ENST00000396988.7
ENST00000449001.6
ENST00000684764.1
CDS CCA 72 bp CCTCATCCCAAAAGCTCCGGTGGGTTCGAATCAGGCTaGGGACATTTCCAAACAGGGTCTCAGCTGACACTT +
Preference number: 6 (lower is better)
Translates to: PHPKSSGGFESG*GHFQTGSQLTL
Trigger: AAGTGTCAGCTGAGACCCTGTTTGGAAATGTCCCCAGCCTGATTCGAACCCACCGGAGCTTTTGGGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000011684.11
ENST00000396988.7
ENST00000449001.6
ENST00000536531.5
ENST00000684764.1
CDS CCA 72 bp TTCAGGGGATGCTGTATCTTGGGCTCTCCCAGTGGCTaGCACAGTAGCTGGCCAAAGGCTTTTTCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: FRGCCILGSPSG*HSSWPKAFSVF
Trigger: GAAGACAGAAAAAGCCTTTGGCCAGCTACTGTGCCAGCCACTGGGAGAGCCCAAGATACAGCATCCCCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304581.8
CDS CAA 90 bp CACAGCCTAGGAAAGTCCCATCTCCAAAGGCAAAATTATCGTGCATaGAGGCAGGGGATGTCCCAGCCACAAGCAGAACTGTCCTCAAGG +
Preference number: 6 (lower is better)
Translates to: HSLGKSHLQRQNYRA*RQGMSQPQAELSSR
Trigger: CCTTGAGGACAGTTCTGCTTGTGGCTGGGACATCCCCTGCCTCAATGCACGATAATTTTGCCTTTGGAGATGGGACTTTCCTAGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6
CDS TCA 72 bp GAAAGTCCCATCTCCAAAGGCAAAATTATCGTGCATTaGGGCAGGGGATGTCCCAGCCACAAGCAGAACTGT +
Preference number: 6 (lower is better)
Translates to: ESPISKGKIIVH*GRGCPSHKQNC
Trigger: ACAGTTCTGCTTGTGGCTGGGACATCCCCTGCCTCAATGCACGATAATTTTGCCTTTGGAGATGGGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449001.6