RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHG4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196155

Ensembl transcript IDs: ENST00000360461.9, ENST00000379344.8, ENST00000393966.1, ENST00000427155.6, ENST00000450733.5, ENST00000562144.5, ENST00000562289.1, ENST00000562744.1, ENST00000563969.5, ENST00000565773.1, ENST00000565899.1, ENST00000567136.1, ENST00000567938.1, ENST00000568621.1, ENST00000569875.5

Found 1545 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCGCAGCTGGAAGTGCACAAGGCTCTGGGCCTCCCGCAGCGCACTaGGCTCCTGCGTGGGGCCCCCGCAGGCCCGTGCCAGCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: AAAGSAQGSGPPAAH*APAWGPRRPVPAPA
Trigger: TGCAGGAGCTGGCACGGGCCTGCGGGGGCCCCACGCAGGAGCTCAGTGCGCTGCGGGAGGCCCAGAGCCTTGTGCACTTCCAGCTGCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp TGGAAGTGCACAAGGCTCTGGGCCTCCCGCAGCGCACTGAGCTCCTaGGTGGGGCCCCCGCAGGCCCGTGCCAGCTCCTGCAGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: WKCTRLWASRSALSS*VGPPQARASSCSSS
Trigger: ACTGCTGCTGCAGGAGCTGGCACGGGCCTGCGGGGGCCCCACGCAGGAGCTCAGTGCGCTGCGGGAGGCCCAGAGCCTTGTGCACTTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp AGGCCCAGCGGCACTCCTGGCGGATGGCCTCTGAGCCCAGCCCCGTaGCCAGAGCCCACATCTTTCGGAAGTGGGCAGGAGGCAAGTCAG +
Preference number: 1 (lower is better)
Translates to: RPSGTPGGWPLSPAP*PEPTSFGSGQEASQ
Trigger: CTGACTTGCCTCCTGCCCACTTCCGAAAGATGTGGGCTCTGGCCACGGGGCTGGGCTCAGAGGCCATCCGCCAGGAGTGCCGCTGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp CCAGCCAGGCCTGGTGGCAGTAAGGCAGGCCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAG +
Preference number: 1 (lower is better)
Translates to: PARPGGSKAGLLLAK*AAPPLGCGSAGSEK
Trigger: CTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGCCTTACTGCCACCAGGCCTGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 90 bp GCTGTGCTGCCCACCGGTGGTAGCTTCAGTGAAGCCTCAAGCTTTTaGTCCAGGGCCAGCCAGGTGTCCTGGCACCGCGCCCAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: AVLPTGGSFSEASSF*SRASQVSWHRAQAQ
Trigger: CTGGGCCTGGGCGCGGTGCCAGGACACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTCACTGAAGCTACCACCGGTGGGCAGCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp AGGCACAGTAGGGGATGCCTGGGGCAGGGCACCTCCTCCAGCCTCTaGTCTGCGGCAGGCAGCAATAGTGGCCGCATGGTGGCAGTGGCA +
Preference number: 1 (lower is better)
Translates to: RHSRGCLGQGTSSSL*SAAGSNSGRMVAVA
Trigger: TGCCACTGCCACCATGCGGCCACTATTGCTGCCTGCCGCAGACCAGAGGCTGGAGGAGGTGCCCTGCCCCAGGCATCCCCTACTGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp TGGGCAGGAGGCAAGTCAGGGTGCCTGGTCCAGTGCAGCTGCAGCTaGTGCAACACAACCCCCGGGCGTTCCTGCTCCAGCTCTGCCAAC +
Preference number: 1 (lower is better)
Translates to: WAGGKSGCLVQCSCS*CNTTPGRSCSSSAN
Trigger: GTTGGCAGAGCTGGAGCAGGAACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp CGGAAGTGGGCAGGAGGCAAGTCAGGGTGCCTGGTCCAGTGCAGCTaGAGCTGCTGCAACACAACCCCCGGGCGTTCCTGCTCCAGCTCT +
Preference number: 1 (lower is better)
Translates to: RKWAGGKSGCLVQCS*SCCNTTPGRSCSSS
Trigger: AGAGCTGGAGCAGGAACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCCTGCCCACTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp CTCAGACTGAAGCCAGGCTGGGCTGTGGGCACACAGAAGCAGCACTaGCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCATACC +
Preference number: 1 (lower is better)
Translates to: LRLKPGWAVGTQKQH*PALDIPSPWQGGHT
Trigger: GGTATGGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 90 bp GCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: ATAPAAARKALPSAA*FPLAAPGTRPLGLL
Trigger: AAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 90 bp GCAGGAGGCAAGTCAGGGTGCCTGGTCCAGTGCAGCTGCAGCTGCTaGAACACAACCCCCGGGCGTTCCTGCTCCAGCTCTGCCAACACT +
Preference number: 1 (lower is better)
Translates to: AGGKSGCLVQCSCSC*NTTPGRSCSSSANT
Trigger: AGTGTTGGCAGAGCTGGAGCAGGAACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp CCCTATGGCGCAGGAAGGCATAGGCCACTCGTGGTGGGTGCCGGGTaGAAGCCTCCAGCTCACGCAGGAAGAAGTGGCAGTGGAAGTCCC +
Preference number: 1 (lower is better)
Translates to: PYGAGRHRPLVVGAG*KPPAHAGRSGSGSP
Trigger: GGGACTTCCACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGCCTATGCCTTCCTGCGCCATAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp GGCAAGGTGGCCATACCACTGGCCAGCAGCTCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCAGGCTTAGGGAGGCCGGATCCACTG +
Preference number: 1 (lower is better)
Translates to: GKVAIPLASSSQQRS*ARRQSAGLGRPDPL
Trigger: CAGTGGATCCGGCCTCCCTAAGCCTGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 90 bp GGGTGCCGGGTGCAAGCCTCCAGCTCACGCAGGAAGAAGTGGCAGTaGAAGTCCCGCAGCTTCTCCAGGTTGCCAAAGAGGTGGGCACGC +
Preference number: 1 (lower is better)
Translates to: GCRVQASSSRRKKWQ*KSRSFSRLPKRWAR
Trigger: GCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACCCGGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR TCA 90 bp AGGTACAGCAGGAGGCGGATGAGTTCCTGGCTGCTGCACTCAGACTaGAGCCAGGCTGGGCTGTGGGCACACAGAAGCAGCACTGCCCGG +
Preference number: 1 (lower is better)
Translates to: RYSRRRMSSWLLHSD*SQAGLWAHRSSTAR
Trigger: CCGGGCAGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCTGAGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGTACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 90 bp GAGATGTCAGCTGTCCAGGCCTGCTTGATAGCCAGGCTGGAGGCCTaGAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGGAACCAGATC +
Preference number: 1 (lower is better)
Translates to: EMSAVQACLIARLEA*STKVSLALRRRNQI
Trigger: GATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCCTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp CCTCCAGCCTCTGGTCTGCGGCAGGCAGCAATAGTGGCCGCATGGTaGCAGTGGCAGGCAGGTTCACTGAGACTCTGCCCCAGATTCCGA +
Preference number: 1 (lower is better)
Translates to: PPASGLRQAAIVAAW*QWQAGSLRLCPRFR
Trigger: TCGGAATCTGGGGCAGAGTCTCAGTGAACCTGCCTGCCACTGCCACCATGCGGCCACTATTGCTGCCTGCCGCAGACCAGAGGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp CGTGGTGGGTGCCGGGTGCAAGCCTCCAGCTCACGCAGGAAGAAGTaGCAGTGGAAGTCCCGCAGCTTCTCCAGGTTGCCAAAGAGGTGG +
Preference number: 1 (lower is better)
Translates to: RGGCRVQASSSRRKK*QWKSRSFSRLPKRW
Trigger: CCACCTCTTTGGCAACCTGGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp CCCAAACTGCACCCTATGGCGCAGGAAGGCATAGGCCACTCGTGGTaGGTGCCGGGTGCAAGCCTCCAGCTCACGCAGGAAGAAGTGGCA +
Preference number: 1 (lower is better)
Translates to: PKLHPMAQEGIGHSW*VPGASLQLTQEEVA
Trigger: TGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGCCTATGCCTTCCTGCGCCATAGGGTGCAGTTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp ACGGCCTGCCTCCAAAGCAGGTGGGAGATGTCAGCTGTCCAGGCCTaGTTGATAGCCAGGCTGGAGGCCTGCAGCACAAAGGTGTCCCTG +
Preference number: 1 (lower is better)
Translates to: TACLQSRWEMSAVQA*LIARLEACSTKVSL
Trigger: CAGGGACACCTTTGTGCTGCAGGCCTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTCCCACCTGCTTTGGAGGCAGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp CCGGAAGGCACTTCCTTCAGCAGCGTGCTTCCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGCCCA +
Preference number: 1 (lower is better)
Translates to: PEGTSFSSVLPTSST*YTAPGAASCSWLSP
Trigger: TGGGCTCAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTGCCTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 90 bp GGCTCCATGGGCTGGGGCACAGCCTTCACACTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGCTTCC +
Preference number: 1 (lower is better)
Translates to: GSMGWGTAFTLSMAP*SRAQAAWQFCSRAS
Trigger: GGAAGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGGCTGTGCCCCAGCCCATGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp GCCTCTGGTCTGCGGCAGGCAGCAATAGTGGCCGCATGGTGGCAGTaGCAGGCAGGTTCACTGAGACTCTGCCCCAGATTCCGATCGAAG +
Preference number: 1 (lower is better)
Translates to: ASGLRQAAIVAAWWQ*QAGSLRLCPRFRSK
Trigger: CTTCGATCGGAATCTGGGGCAGAGTCTCAGTGAACCTGCCTGCCACTGCCACCATGCGGCCACTATTGCTGCCTGCCGCAGACCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR TCA 90 bp GACAGCGGAGACCCAGAAGAGCTGGGTCTCTGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGCAAGAGGCAGGGTCTCCAGGAAGGG +
Preference number: 1 (lower is better)
Translates to: DSGDPEELGLCTGAG*GTPEQSKRQGLQEG
Trigger: CCCTTCCTGGAGACCCTGCCTCTTGCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTCCGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp GCTCCTCAAAAAGGAAGATGCGGCGCACGGACTTGTGGCGCCCAGTaGGCACCACAAACTCATCCTGTCGCACCAGCTGCCCCTGTTCCT +
Preference number: 1 (lower is better)
Translates to: APQKGRCGARTCGAQ*APQTHPVAPAAPVP
Trigger: AGGAACAGGGGCAGCTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp CCTCGCTGGGAGCAATGTCTCGGAAGGCCTTGTTCCCCACACCCATaGACACCATCTCAGCCATGCGCACCTCCTTGTTGTGGACGGCCT +
Preference number: 1 (lower is better)
Translates to: PRWEQCLGRPCSPHP*TPSQPCAPPCCGRP
Trigger: AGGCCGTCCACAACAAGGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACATTGCTCCCAGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACC +
Preference number: 1 (lower is better)
Translates to: TPWSQQIQRGNVPWS*RLLDLLLVQSRAQT
Trigger: GGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393966.1
3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: SREAMFLGAAGCWIY*SSSPGLRHRVSPPG
Trigger: GCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR GCA 90 bp TTGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGCTaGCCCTGTTCCTTGAGGTTAACATCACAGCCCTGGATGGCGTCC +
Preference number: 1 (lower is better)
Translates to: LWRPVRTTNSSCRTS*PCSLRLTSQPWMAS
Trigger: GGACGCCATCCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp TACAGGGGACAGCGGAGACCCAGAAGAGCTGGGTCTCTGTACAGGTaGAGGTTGAGGGACCCCAGAACAGAGCAAGAGGCAGGGTCTCCA +
Preference number: 1 (lower is better)
Translates to: YRGQRRPRRAGSLYR*RLRDPRTEQEAGSP
Trigger: TGGAGACCCTGCCTCTTGCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTCCGCTGTCCCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp TCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTaGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGG +
Preference number: 1 (lower is better)
Translates to: SRASSVWTNSRACIR*LLCRVSWCSNPSTR
Trigger: CCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 90 bp GCCTTCACACTTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTaGCAGTTCTGTAGTAGAGCTTCCAGCCGCCTTCGGAAATCCAGC +
Preference number: 1 (lower is better)
Translates to: AFTLSMAPWSRAQAA*QFCSRASSRLRKSS
Trigger: GCTGGATTTCCGAAGGCGGCTGGAAGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 90 bp AAGAGCAGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTTGTaGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGCTGC +
Preference number: 1 (lower is better)
Translates to: KSSSSSKRKMRRTDL*RPVRTTNSSCRTSC
Trigger: GCAGCTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCTGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp GGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTA +
Preference number: 1 (lower is better)
Translates to: GHSRSREAMFLGAAG*WIYCSSSPGLRHRV
Trigger: TACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACA +
Preference number: 1 (lower is better)
Translates to: TPWSQQIQRGNVPWS*RLLDLLLVQSRAQT
Trigger: TGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR TCA 90 bp TGTAGGCAAATGTGTCAACCCCTGTGGGCCCATGGCGAGGCTTGCTaGAGAGCAGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACT +
Preference number: 1 (lower is better)
Translates to: CRQMCQPLWAHGEAC*RAAAPQKGRCGART
Trigger: AGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCTGCTCTTCAGCAAGCCTCGCCATGGGCCCACAGGGGTTGACACATTTGCCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 90 bp GGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCAT +
Preference number: 1 (lower is better)
Translates to: GPPVFGPTLGPVFAG*SAGSVGAAIHPPGH
Trigger: ATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 90 bp CGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: RCTCRLEVAQVSATP*SQQIQRGNVPWSCR
Trigger: CCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
3UTR CCA 90 bp GGACCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGT +
Preference number: 1 (lower is better)
Translates to: GPVPMVTELGFKARH*GSAARSPPVFFLRG
Trigger: ACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR CCA 90 bp CACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTaGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTC +
Preference number: 1 (lower is better)
Translates to: HTSIWCSPLSRASSV*TNSRACIRWLLCRV
Trigger: GACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGT +
Preference number: 1 (lower is better)
Translates to: HSRSREAMFLGAAGC*IYCSSSPGLRHRVS
Trigger: ACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR GCA 90 bp GCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACCCACAACTGGGATGGGAGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: AHGPPPAYSMETPNV*SSLFLTHNWDGSWG
Trigger: TCCCCAGCTCCCATCCCAGTTGTGGGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR GCA 90 bp AACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTaGAGCAATCCATCCACCCGGTCATATAGCTCGTCAGCCTTGTCC +
Preference number: 1 (lower is better)
Translates to: NSRACIRWLLCRVSW*SNPSTRSYSSSALS
Trigger: GGACAAGGCTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 90 bp ACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGCCTTG +
Preference number: 1 (lower is better)
Translates to: TNSRACIRWLLCRVS*CSNPSTRSYSSSAL
Trigger: CAAGGCTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 90 bp GTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACCCTGG +
Preference number: 1 (lower is better)
Translates to: VSPMATHIRKGSQQR*TCRLEVAQVSATPW
Trigger: CCAGGGTGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR GCA 90 bp TCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGC +
Preference number: 1 (lower is better)
Translates to: SSVWTNSRACIRWLL*RVSWCSNPSTRSYS
Trigger: GCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAAC +
Preference number: 1 (lower is better)
Translates to: EPIQALQPDFPREAP*QLVQWPHTSERVVN
Trigger: GTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR CCA 90 bp CTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTA +
Preference number: 1 (lower is better)
Translates to: LQPDFPREAPCQLVQ*PHTSERVVNSVAHV
Trigger: TACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTCCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: APPLGCGSAGSEKATAPAPTSST*YTAPGA
Trigger: AGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CAA 90 bp GGCAGTAAGGCAGGCCTCCTCCTAGCGAAGTGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GSKAGLLLAKWAAPP*GCGSAGSEKATAPA
Trigger: AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGCCTTACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp GGCAGTAAGGCAGGCCTCCTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTCTTCGGGCCTGGGGATaGTTCGCAGGTACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GSKAGLLLAKWAAPPLGCLRAWG*FAGTAG
Trigger: TCCTGCTGTACCTGCGAAGCATCCCCAGGCCCGAAG...ACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGCCTTACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp CTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGCACTGTCAGTCCCAGTaGCTGTACTTCGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LLAKWAAPPLGCGSAGSEHCQSQ*LYFGPG
Trigger: CCCAGGCCCGAAGTACAGGCACTGGGACTGACAGTG...CTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCCCCAGCCTCCTCCAGTaGTGGCCAGCCCACCTGCTG +
Preference number: 2 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAPSLLQ*WPAHLL
Trigger: CAGCAGGTGGGCTGGCCAGCACTGGAGGAGGCTGGG...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCGCCAGCCAGGTGTCCTaGCACCGCGCCCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVASQVS*HRAQAQ
Trigger: CTGGGCCTGGGCGCGGTGCCAGGACACCTGGCTGGC...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CAA 90 bp GCCTGCCTCCAAAGCAGGTGGGAGATGTCAGCTGTCCAGGCCTGCTaGATAGCCAGGCTGGAGGCCTGCAGCACAAAGGTGTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: ACLQSRWEMSAVQAC*IARLEACSTKVSLA
Trigger: GGCCAGGGACACCTTTGTGCTGCAGGCCTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTCCCACCTGCTTTGGAGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp AGCCCACGTCAAGGCCTCCCTGAAGAGCTGAAACAGCCTCTCAGCATCCGCCAGAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: SPRQGLPEELKQPLSIRQSTARP*TSRVPG
Trigger: GCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCT...CTGGCGGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGTGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp GGCCTGCAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGGAACCAGATCTCGAACCTTCACACTTTCGATaGCCCCCTGGAGCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: GLQHKGVPGLAAAEPDLEPSHFR*PPGAGH
Trigger: GTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGG...TTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp GGCCTGCAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGGAACCAGATCTCGAAACCTCCTCCAGCCTCTaGTCTGCGGCAGGCAGCAAT +
Preference number: 2 (lower is better)
Translates to: GLQHKGVPGLAAAEPDLETSSSL*SAAGSN
Trigger: ATTGCTGCCTGCCGCAGACCAGAGGCTGGAGGAGGT...TTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CAA 90 bp TTGATAGCCAGGCTGGAGGCCTGCAGCACAAAGGTGTCCCTGGCCTaGCGGCGGCGGAACCAGATCTCGAAGCGCAGGTTGCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LIARLEACSTKVSLA*RRRNQISKRRLLFP
Trigger: TGGGAACAGCAACCTGCGCTTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCCTCCAGCCTGGCTATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 2 (lower is better)
Translates to: APPLGCGSAGSEKATAPAPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGGGCACCCTAGTCACTaGCTAGAGGCACATGGTCCC +
Preference number: 2 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMGHPSH*LEAHGP
Trigger: GGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp GCAGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTTGTGGCGCCCAGTGCTCCCCTTGCCTGACCTaGTCCTGGGCAACCTGGTAC +
Preference number: 2 (lower is better)
Translates to: AAAPQKGRCGARTCGAQCSPCLT*SWATWY
Trigger: GTACCAGGTTGCCCAGGAGCAGGTCAGGCAAGGGGA...GCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCCTGCCTAGAGGCACATaGTCCCCCACCAGCCTACAG +
Preference number: 2 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVLPRGT*SPTSLQ
Trigger: CTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAG...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR CAA 90 bp CAGGAGGCAGTCAGCAGGCTTAGGGAGGCCGGATCCACTGGGGGCTaGGGAAGGGAAATGACTTGGGTCTGCCTTGGACCACCTATCCAG +
Preference number: 2 (lower is better)
Translates to: QEAVSRLREAGSTGG*GREMTWVCLGPPIQ
Trigger: CTGGATAGGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCCCAAGCCCCCAGTGGATCCGGCCTCCCTAAGCCTGCTGACTGCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CAA 90 bp CGGTCGTTGATGGCTTCCTCGCTGGGAGCAATGTCTCGGAAGGCCTaGTTCCCCACACCCATGGACACCATCTCAGCCATGCGCACCTCC +
Preference number: 2 (lower is better)
Translates to: RSLMASSLGAMSRKA*FPTPMDTISAMRTS
Trigger: GGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACATTGCTCCCAGCGAGGAAGCCATCAACGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR TCA 90 bp GCAGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTTGTGGCGCCCAGTGCACTGGAGCCACTGGCTaGTGGGCATTGGGACGAGAT +
Preference number: 2 (lower is better)
Translates to: AAAPQKGRCGARTCGAQCTGATG*WALGRD
Trigger: ATCTCGTCCCAATGCCCATCAGCCAGTGGCTCCAGT...GCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: RWHRWAKALENSVSWARRIRWLL*RVSWCS
Trigger: GCTGCACCAACTGACCCTGCAGAGCAACCAGCGAAT...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 2 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp AGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGCCCAGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 2 (lower is better)
Translates to: SSTWYTAPGAASCSWLSPGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...TGGGCTCAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: APPLGCGSAGSEKATAPAVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp TGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCATCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: CGSAGSEKATAPAAARKASQQRS*ARRQSA
Trigger: TGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGA...TGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGGTGGCCATACCACTaGCCAGCAGCTCCCAACAGA +
Preference number: 2 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLRWPYH*PAAPNR
Trigger: TCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCT...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCGAGTCCCTGGCAAGGTaGCCATACCACTGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGESLAR*PYHWPA
Trigger: TGCTGGCCAGTGGTATGGCCACCTTGCCAGGGACTC...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCCCTGTACTTCGGGCCTaGGGATGCTTCGCAGGTACA +
Preference number: 2 (lower is better)
Translates to: GQQALRRQLLQLQPGRHFPVLRA*GCFAGT
Trigger: TGTACCTGCGAAGCATCCCCAGGCCCGAAGTACAGG...GAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGTGCCTGACCTGCTCCTaGGCAACCTGGTACAGCTCC +
Preference number: 2 (lower is better)
Translates to: RWAKALENSVSWARRARKCLTCS*ATWYSS
Trigger: GGAGCTGTACCAGGTTGCCCAGGAGCAGGTCAGGCA...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGAGCCACTGGAGCCACTaGCTGATGGGCATTGGGACG +
Preference number: 2 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKSHWSH*LMGIGT
Trigger: CGTCCCAATGCCCATCAGCCAGTGGCTCCAGTGGCT...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGLSMAP*SRAQAA
Trigger: GGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAG...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CAA 90 bp CTGAAGAGCAGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTaGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGC +
Preference number: 2 (lower is better)
Translates to: LKSSSSSKRKMRRTD*WRPVRTTNSSCRTS
Trigger: GCTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCTGCTCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR TCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCCAGGAAAGGCAAGCATaGGGGCCCAGTAGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAQERQA*GPSRGG
Trigger: TCCACCTCTACTGGGCCCTCATGCTTGCCTTTCCTG...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCGAAATGACTTGGGTCTaGCTTGGACCACCTATCCAG +
Preference number: 2 (lower is better)
Translates to: HRSSTARPWTSRVPGKVAEMTWV*LGPPIQ
Trigger: CTGGATAGGTGGTCCAAGGCAGACCCAAGTCATTTC...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: RWAKALENSVSWARRARKGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTACCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PREAPCQLVQWPHTSERVPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCGGAGGCAAGTCAGGGTaGCTGGTCCAGTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVGGKSG*LVQCSC
Trigger: GCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCC...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp GCGCACGGACTTGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGTGGTCCCCCAGTGCTTaGTGCTTGTCCTTGAAGAAG +
Preference number: 2 (lower is better)
Translates to: AHGLVAPSAHHKLILSHQWSPSA*CLSLKK
Trigger: CTTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCA...CTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 2 (lower is better)
Translates to: GQEPIQALQPDFPREAPCGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTTCTTCCTGAGGGGTaGGGGCACCCTAGTCACTGC +
Preference number: 2 (lower is better)
Translates to: TELGFKARHWGSAARSPPVLPEG*GHPSHC
Trigger: GCAGTGACTAGGGTGCCCCCACCCCTCAGGAAGAAC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp GCGCACGGACTTGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGTTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 2 (lower is better)
Translates to: AHGLVAPSAHHKLILSHQFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...CTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGGCAGCCCCGCCGTTaGGATGTGGGTCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVGQPRR*DVGQQA
Trigger: AGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCC...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp TCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SAGSVGAAIHPPGHIARQLLLAK*AAPPLG
Trigger: TCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAG...CTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGGCTCAGGGTCACCTCTaGGACCTCTTGCTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: RWAKALENSVSWARRARKAQGHL*DLLLQP
Trigger: TGGCTGAAGCAAGAGGTCCCAGAGGTGACCCTGAGC...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAAAGAGCCTTGGGCCTaGAGCAGCATGTCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAKEPWA*SSMSSE
Trigger: CTCGCTGGACATGCTGCTCCAGGCCCAAGGCTCTTT...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CAA 90 bp CGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCA +
Preference number: 2 (lower is better)
Translates to: RASSVWTNSRACIRW*LCRVSWCSNPSTRS
Trigger: TGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR TCA 90 bp TGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTACAGCAGGAGGCGGATaGGTTCCTGGCTGCTGCACT +
Preference number: 2 (lower is better)
Translates to: CSPLSRASSVWTNSRACITAGGG*VPGCCT
Trigger: AGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGT...AATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: LGFKARHWGSAARSPPVFLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGA +
Preference number: 2 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVLLLAK*AAPPLG
Trigger: TCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAG...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCCTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: ARSLFRLYNQTSLERPRALADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp ATCCTGTCGCACCAGCTGCCCCTGTTCCTTGAGGTTAACATCACAGCCCTGGATACAGTAGGGGATGCCTaGGGCAGGGCACCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: ILSHQLPLFLEVNITALDTVGDA*GRAPPP
Trigger: TGGAGGAGGTGCCCTGCCCCAGGCATCCCCTACTGT...ATCCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: ERQCSLELQAAGSTARPVLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 2 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGGGCACCCTAGTCACTaGCTAGAGGCACATGGTCCC +
Preference number: 2 (lower is better)
Translates to: FPREAPCQLVQWPHTSERGHPSH*LEAHGP
Trigger: GGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGGGCACCCTAGTCACTaGCTAGAGGCACATGGTCCC +
Preference number: 2 (lower is better)
Translates to: PVPMVTELGFKARHWGSAGHPSH*LEAHGP
Trigger: GGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCGAAATGACTTGGGTCTaGCTTGGACCACCTATCCAG +
Preference number: 2 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVEMTWV*LGPPIQ
Trigger: CTGGATAGGTGGTCCAAGGCAGACCCAAGTCATTTC...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp CCAAAGCAGGTGGGAGATGTCAGCTGTCCAGGCCTGCTTGATAGCCAGGCTGGAGAGTCTAGCACCTGCTaGATCAGGACCTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: PKQVGDVSCPGLLDSQAGESSTC*IRTSVC
Trigger: GCAGACAGAGGTCCTGATGCAGCAGGTGCTAGACTC...TCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTCCCACCTGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTAGTGAGACCAAGGTCTaGCATCTTGAAGGAGCGCTT +
Preference number: 2 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPSETKV*HLEGAL
Trigger: AAGCGCTCCTTCAAGATGGCAGACCTTGGTCTCACT...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: ARSLFRLYNQTSLERPRARGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 2 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTTCTTCCTGAGGGGTaGGGGCACCCTAGTCACTGC +
Preference number: 2 (lower is better)
Translates to: FPREAPCQLVQWPHTSERVLPEG*GHPSHC
Trigger: GCAGTGACTAGGGTGCCCCCACCCCTCAGGAAGAAC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp TCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGTGCCGTCCTGTAGTCTaGGCTCAGGGTCACCTCTGG +
Preference number: 2 (lower is better)
Translates to: SAGSVGAAIHPPGHIARQCRPVV*AQGHLW
Trigger: CCAGAGGTGACCCTGAGCCCAGACTACAGGACGGCA...CTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGAAGCCTCAAGCTTTTaGTCCAGGGCCAGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSEASSF*SRASQV
Trigger: CACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTC...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR TCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAGCTTGGGAAGGGAAATaGCTTGGGTCTGCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPAWEGK*LGSALD
Trigger: GTCCAAGGCAGACCCAAGTCATTTCCCTTCCCAAGC...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 2 (lower is better)
Translates to: PREAPCQLVQWPHTSERVGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: LGFKARHWGSAARSPPVFRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp GGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GQQALRRQLLQLQPGRHFCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...GAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 2 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTATCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: EPIQALQPDFPREAPCQLSQQRS*ARRQSA
Trigger: TGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGA...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp TCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 2 (lower is better)
Translates to: SAGSVGAAIHPPGHIARQRLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...CTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp ATCCTGTCGCACCAGCTGCCCCTGTTCCTTGAGGTTAACATCACAGCCCTGGATAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 2 (lower is better)
Translates to: ILSHQLPLFLEVNITALDRLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...ATCCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGAGAATTCAGTCAGCTaGGCTCGCAGGGCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSENSVS*ARRARK
Trigger: CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTC...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTCCAGGCTCCATGGGCTaGGGCACAGCCTTCACACTT +
Preference number: 2 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVPGSMG*GTAFTL
Trigger: AAGTGTGAAGGCTGTGCCCCAGCCCATGGAGCCTGG...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp CCAAAGCAGGTGGGAGATGTCAGCTGTCCAGGCCTGCTTGATAGCCAGGCTGGAAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 2 (lower is better)
Translates to: PKQVGDVSCPGLLDSQAGNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...TCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTCCCACCTGCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 2 (lower is better)
Translates to: IQALQPDFPREAPCQLVQPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVLPSAA*FPLAAP
Trigger: AGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCAACCCACAACTGGGATaGGAGCTGGGGACAGGAGAA +
Preference number: 2 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVNPQLG*ELGTGE
Trigger: TTCTCCTGTCCCCAGCTCCCATCCCAGTTGTGGGTT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCACCAGCCTACAGCATaGAAACACCCAATGTCTGCT +
Preference number: 2 (lower is better)
Translates to: TELGFKARHWGSAARSPPHQPTA*KHPMSA
Trigger: AGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCTTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 2 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp GTGGTAGCTTCAGTGAAGCCTCAAGCTTTTGGTCCAGGGCCAGCCAGGTGTCCTGGAAGGGAAATGACTTaGGTCTGCCTTGGACCACCT +
Preference number: 2 (lower is better)
Translates to: VVASVKPQAFGPGPARCPGREMT*VCLGPP
Trigger: AGGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCC...AGGACACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTCACTGAAGCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCAGCCACACTTCAATCTaGTGCAGTCCGCTTTCCCGG +
Preference number: 2 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVSHTSI*CSPLSR
Trigger: CCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 2 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGCGAGGCTTATTCTTaGTGTAGAGCGCGTACATCC +
Preference number: 2 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSSEAYS*CRARTS
Trigger: GGATGTACGCGCTCTACAGCAAGAATAAGCCTCGCT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: FPREAPCQLVQWPHTSERRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCTTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 2 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAAGGTGGCCATACCACTaGCCAGCAGCTCCCAACAGA +
Preference number: 2 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSRWPYH*PAAPNR
Trigger: TCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCT...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTCTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVLADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR TCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCCTAGACTCCTTCTCTaGGACACCAAAGGCCTAACA +
Preference number: 2 (lower is better)
Translates to: FPREAPCQLVQWPHTSERPRLLL*DTKGLT
Trigger: TGTTAGGCCTTTGGTGTCTCAGAGAAGGAGTCTAGG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 2 (lower is better)
Translates to: MATHIRKGSQQRCTCRLELGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 2 (lower is better)
Translates to: FPREAPCQLVQWPHTSERNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 2 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CCA 90 bp ATCCTGTCGCACCAGCTGCCCCTGTTCCTTGAGGTTAACATCACAGCCCTGGATCACCAGCCTACAGCATaGAAACACCCAATGTCTGCT +
Preference number: 2 (lower is better)
Translates to: ILSHQLPLFLEVNITALDHQPTA*KHPMSA
Trigger: AGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTG...ATCCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: FPREAPCQLVQWPHTSERGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR GCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGAGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACC +
Preference number: 2 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGETPNV*SSLFLT
Trigger: GGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTC...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR GCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACC +
Preference number: 2 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVETPNV*SSLFLT
Trigger: GGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACC +
Preference number: 2 (lower is better)
Translates to: FPREAPCQLVQWPHTSERETPNV*SSLFLT
Trigger: GGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR GCA 90 bp AAGAACTTGGAGCACAAATTCGGGCATCAACTAGCACTGTCAGTCCCAGTGCCTGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: KNLEHKFGHQLALSVPVPGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...AGGCACTGGGACTGACAGTGCTAGTTGATGCCCGAATTTGTGCTCCAAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR TCA 72 bp CGCAGCTTCTCCAGGTTGCCAAAGAGGTGGGCACGCTaGCCGCGGAGGCCCTGGGGCACATCGGGGCGATCC +
Preference number: 3 (lower is better)
Translates to: RSFSRLPKRWAR*PRRPWGTSGRS
Trigger: GGATCGCCCCGATGTGCCCCAGGGCCTCCGCGGTCAGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 72 bp GCTGTCCAGGCCTGCTTGATAGCCAGGCTGGAGGCCTaGAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGG +
Preference number: 3 (lower is better)
Translates to: AVQACLIARLEA*STKVSLALRRR
Trigger: CCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCCTCCAGCCTGGCTATCAAGCAGGCCTGGACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp CCTGGTGGCAGTAAGGCAGGCCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGATGTGGGTCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: PGGSKAGLLLAK*AAPPLGCGSAG
Trigger: GCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGCCTTACTGCCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp TCGTTTCCGTGCCGCAGCTGGAAGTGCACAAGGCTCTaGGCCTCCCGCAGCGCACTGAGCTCCTGCGTGGGG +
Preference number: 3 (lower is better)
Translates to: SFPCRSWKCTRL*ASRSALSSCVG
Trigger: CCCCACGCAGGAGCTCAGTGCGCTGCGGGAGGCCCAGAGCCTTGTGCACTTCCAGCTGCGGCACGGAAACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 72 bp GGCAAGTCAGGGTGCCTGGTCCAGTGCAGCTGCAGCTaGTGCAACACAACCCCCGGGCGTTCCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GKSGCLVQCSCS*CNTTPGRSCSS
Trigger: GCTGGAGCAGGAACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 72 bp GGCTGGAGGCCTGCAGCACAAAGGTGTCCCTGGCCTTaGGGCGGCGGAACCAGATCTCGAAGCGCAGGTTGC +
Preference number: 3 (lower is better)
Translates to: GWRPAAQRCPWP*GGGTRSRSAGC
Trigger: GCAACCTGCGCTTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCCTCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 72 bp CCAGCTGCAGCCCGGAAGGCACTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCTGGTACACGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: PAAARKALPSAA*FPLAAPGTRPL
Trigger: CAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTGCCTTCCGGGCTGCAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 72 bp GAAGCTGTAGGCCTTCCTCAGGGGAGGGTGGGCAGGTaGAGCGGGGACCTGGCTGACACACAGGCTAGCTGT +
Preference number: 3 (lower is better)
Translates to: EAVGLPQGRVGR*SGDLADTQASC
Trigger: ACAGCTAGCCTGTGTGTCAGCCAGGTCCCCGCTGCACCTGCCCACCCTCCCCTGAGGAAGGCCTACAGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp GGGCTGTGGGCACACAGAAGCAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGCAAGGTGGCCATACCA +
Preference number: 3 (lower is better)
Translates to: GLWAHRSSTARP*TSRVPGKVAIP
Trigger: TGGTATGGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGTGCCCACAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp GCTCCATGGGCTGGGGCACAGCCTTCACACTTTCGATaGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: APWAGAQPSHFR*PPGAGHKLPGS
Trigger: ACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGGCTGTGCCCCAGCCCATGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp CCCACCGGTGGTAGCTTCAGTGAAGCCTCAAGCTTTTaGTCCAGGGCCAGCCAGGTGTCCTGGCACCGCGCC +
Preference number: 3 (lower is better)
Translates to: PTGGSFSEASSF*SRASQVSWHRA
Trigger: GGCGCGGTGCCAGGACACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTCACTGAAGCTACCACCGGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp CACCCTATGGCGCAGGAAGGCATAGGCCACTCGTGGTaGGTGCCGGGTGCAAGCCTCCAGCTCACGCAGGAA +
Preference number: 3 (lower is better)
Translates to: HPMAQEGIGHSW*VPGASLQLTQE
Trigger: TTCCTGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGCCTATGCCTTCCTGCGCCATAGGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 72 bp AAGTCAGGGTGCCTGGTCCAGTGCAGCTGCAGCTGCTaGAACACAACCCCCGGGCGTTCCTGCTCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: KSGCLVQCSCSC*NTTPGRSCSSS
Trigger: AGAGCTGGAGCAGGAACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAGGCACCCTGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 72 bp GCAGGAAGGCATAGGCCACTCGTGGTGGGTGCCGGGTaGAAGCCTCCAGCTCACGCAGGAAGAAGTGGCAGT +
Preference number: 3 (lower is better)
Translates to: AGRHRPLVVGAG*KPPAHAGRSGS
Trigger: ACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGCCTATGCCTTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp GGACATCCCGAGTCCCTGGCAAGGTGGCCATACCACTaGCCAGCAGCTCCCAACAGAGGTCTTGGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: GHPESLARWPYH*PAAPNRGLGPG
Trigger: TCCTGGCCCAAGACCTCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCTTGCCAGGGACTCGGGATGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp TCTGGTCTGCGGCAGGCAGCAATAGTGGCCGCATGGTaGCAGTGGCAGGCAGGTTCACTGAGACTCTGCCCC +
Preference number: 3 (lower is better)
Translates to: SGLRQAAIVAAW*QWQAGSLRLCP
Trigger: GGGGCAGAGTCTCAGTGAACCTGCCTGCCACTGCCACCATGCGGCCACTATTGCTGCCTGCCGCAGACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CAA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGG +
Preference number: 3 (lower is better)
Translates to: RWHRWAKALENSVSWARRACIRW*LCRVSW
Trigger: CCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 72 bp AAAGGAAGATGCGGCGCACGGACTTGTGGCGCCCAGTaGGCACCACAAACTCATCCTGTCGCACCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: KGRCGARTCGAQ*APQTHPVAPAA
Trigger: GGCAGCTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp CATTGCCGTCCTGTAGTCTGGGCTCAGGGTCACCTCTaGGACCTCTTGCTTCAGCCATGTCAGCTCCCGGCC +
Preference number: 3 (lower is better)
Translates to: HCRPVVWAQGHL*DLLLQPCQLPA
Trigger: GGCCGGGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGTGACCCTGAGCCCAGACTACAGGACGGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp AACAGCCTCTCAGCATCCGCCAGCCGCTGGCACCGCTaGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: NSLSASASRWHR*AKALENSVSWA
Trigger: AGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGGCTGGCGGATGCTGAGAGGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp CTTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTaGCAGTTCTGTAGTAGAGCTTCCAGCCGCCTTCGG +
Preference number: 3 (lower is better)
Translates to: LSMAPWSRAQAA*QFCSRASSRLR
Trigger: CCGAAGGCGGCTGGAAGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp GGCTGGGGCACAGCCTTCACACTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: GWGTAFTLSMAP*SRAQAAWQFCS
Trigger: ACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGGCTGTGCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp CTGCGGCAGGCAGCAATAGTGGCCGCATGGTGGCAGTaGCAGGCAGGTTCACTGAGACTCTGCCCCAGATTC +
Preference number: 3 (lower is better)
Translates to: LRQAAIVAAWWQ*QAGSLRLCPRF
Trigger: GAATCTGGGGCAGAGTCTCAGTGAACCTGCCTGCCACTGCCACCATGCGGCCACTATTGCTGCCTGCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp TGCCGGGTGCAAGCCTCCAGCTCACGCAGGAAGAAGTaGCAGTGGAAGTCCCGCAGCTTCTCCAGGTTGCCA +
Preference number: 3 (lower is better)
Translates to: CRVQASSSRRKK*QWKSRSFSRLP
Trigger: TGGCAACCTGGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACCCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CAA 90 bp GCACTTCAGGACATAGTTGACGGTGCGGTCGTTGATGGCTTCCTCGCTGGGAGCAGCAGCAGTGCGTACTaGCCCATGCGCTGGATGGGC +
Preference number: 3 (lower is better)
Translates to: ALQDIVDGAVVDGFLAGSSSSAY*PMRWMG
Trigger: GCCCATCCAGCGCATGGGCAAGTACGCACTGCTGCT...GCTCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAACTATGTCCTGAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CAA 90 bp AGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGCCCACGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: SSTWYTAPGAASCSWLSPRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...TGGGCTCAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR TCA 72 bp GACCCAGAAGAGCTGGGTCTCTGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGCAAGAGGCAGGGTCTC +
Preference number: 3 (lower is better)
Translates to: DPEELGLCTGAG*GTPEQSKRQGL
Trigger: GAGACCCTGCCTCTTGCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAGAGACCCAGCTCTTCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR GCA 72 bp CTCCAAAGCAGGTGGGAGATGTCAGCTGTCCAGGCCTaGTTGATAGCCAGGCTGGAGGCCTGCAGCACAAAG +
Preference number: 3 (lower is better)
Translates to: LQSRWEMSAVQA*LIARLEACSTK
Trigger: CTTTGTGCTGCAGGCCTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTCCCACCTGCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp ACTTCCTTCAGCAGCGTGCTTCCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGG +
Preference number: 3 (lower is better)
Translates to: TSFSSVLPTSST*YTAPGAASCSW
Trigger: CCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGTCCCGGGCTCAGACCT +
Preference number: 3 (lower is better)
Translates to: SREAMFLGAAGC*IYCSSSPGLRP
Trigger: AGGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393966.1
3UTR CCA 72 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGTCCCGGGCTCAGACAC +
Preference number: 3 (lower is better)
Translates to: SREAMFLGAAGC*IYCSSSPGLRH
Trigger: GTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR CCA 72 bp GTGCAAGCCTCCAGCTCACGCAGGAAGAAGTGGCAGTaGAAGTCCCGCAGCTTCTCCAGGTTGCCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: VQASSSRRKKWQ*KSRSFSRLPKR
Trigger: CCTCTTTGGCAACCTGGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp AGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTTGTaGCGCCCAGTGCGCACCACAAACTCATCCTGTCGC +
Preference number: 3 (lower is better)
Translates to: SSSKRKMRRTDL*RPVRTTNSSCR
Trigger: GCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp GGTAGAGGCTGTCATGGTCAAACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTTCTCGGCACTTCAGGA +
Preference number: 3 (lower is better)
Translates to: GRGCHGQTGLRQ*TPESELLGTSG
Trigger: TCCTGAAGTGCCGAGAAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGTTTGACCATGACAGCCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CAA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: TELGFKARHWGSAARSPPERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CAA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGAGGGAAGGGAAATGACTaGGGTCTGCCTTGGACCACC +
Preference number: 3 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGGKGND*GLPWTT
Trigger: GGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCCC...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CAA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGGGAAGGGAAATGACTaGGGTCTGCCTTGGACCACC +
Preference number: 3 (lower is better)
Translates to: TELGFKARHWGSAARSPPGKGND*GLPWTT
Trigger: GGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCCC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CAA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCCGTCAGCCTTGTCCATaGCCGTCCTGTAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSRQPCP*PSCSLG
Trigger: GCCCAGACTACAGGACGGCAATGGACAAGGCTGACG...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 72 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGG +
Preference number: 3 (lower is better)
Translates to: SQQIQRGNVPWS*RLLDLLLVQSR
Trigger: CCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR GCA 72 bp TGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGCAATCCATCCACCCGG +
Preference number: 3 (lower is better)
Translates to: WTNSRACIRWLL*RVSWCSNPSTR
Trigger: CCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR GCA 72 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGA +
Preference number: 3 (lower is better)
Translates to: RSREAMFLGAAG*WIYCSSSPGLR
Trigger: TCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393966.1
ENST00000563969.5
ENST00000567136.1
3UTR GCA 72 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: AMFLGAAGCWIY*SSSPGLRHRVS
Trigger: ACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
3UTR GCA 72 bp CCAGTGCGCACCACAAACTCATCCTGTCGCACCAGCTaGCCCTGTTCCTTGAGGTTAACATCACAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: PVRTTNSSCRTS*PCSLRLTSQPW
Trigger: CCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CCA 72 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAG +
Preference number: 3 (lower is better)
Translates to: PWSQQIQRGNVP*SCRLLDLLLVQ
Trigger: CTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CAA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CAA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR CCA 72 bp AGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACCCGGTCATATAGCTCG +
Preference number: 3 (lower is better)
Translates to: RACIRWLLCRVS*CSNPSTRSYSS
Trigger: CGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp GAGCAATGTCTCGGAAGGCCTTGTTCCCCACACCCATaGACACCATCTCAGCCATGCGCACCTCCTTGTTGT +
Preference number: 3 (lower is better)
Translates to: EQCLGRPCSPHP*TPSQPCAPPCC
Trigger: ACAACAAGGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACATTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR-3UTR CAA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CAA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: IQALQPDFPREAPCQLVQERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CAA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: PVPMVTELGFKARHWGSARCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR-3UTR CAA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR-3UTR CAA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR GCA 72 bp CAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCACACACATCAGAAAGG +
Preference number: 3 (lower is better)
Translates to: QALQPDFPREAP*QLVQWPHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR GCA 72 bp GCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTaGAGCAATCCATCCACCCGGTCATATAGCTCGTCA +
Preference number: 3 (lower is better)
Translates to: ACIRWLLCRVSW*SNPSTRSYSSS
Trigger: TGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR-3UTR CAA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR GCA 72 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: MATHIRKGSQQR*TCRLEVAQVSA
Trigger: GGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR GCA 72 bp CCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACCCACAACTGGGATGGG +
Preference number: 3 (lower is better)
Translates to: PPPAYSMETPNV*SSLFLTHNWDG
Trigger: CCCATCCCAGTTGTGGGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR GCA 72 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCA +
Preference number: 3 (lower is better)
Translates to: VFGPTLGPVFAG*SAGSVGAAIHP
Trigger: TGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CCA 72 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGGGTAGTCAACAGCGTT +
Preference number: 3 (lower is better)
Translates to: DFPREAPCQLVQ*PHTSERVVNSV
Trigger: AACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
3UTR CCA 72 bp TCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTaGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCA +
Preference number: 3 (lower is better)
Translates to: SSVWTNSRACIR*LLCRVSWCSNP
Trigger: TGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCTGTAGGGAAGCGGGGTaGTGCCTCGCCGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPACREAG*CLAAGT
Trigger: GGTGCCCGCGGCGAGGCAGCACCCCGCTTCCCTACA...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGGCATCCGCCAGCCGCTaGCACCGCTGGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LLAKWAAPPLGCGSAGSEASASR*HRWAKA
Trigger: GGCTTTGGCCCAGCGGTGCCAGCGGCTGGCGGATGC...CTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCAGGGAAGCGGGGTGCTaGCTCGCCGCGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVREAGC*LAAGTQ
Trigger: CTGGGTGCCCGCGGCGAGGCAGCACCCCGCTTCCCT...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGAGCGCACTGAGCTCCTaGGTGGGGCCCCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMSALSS*VGPPQA
Trigger: GGCCTGCGGGGGCCCCACGCAGGAGCTCAGTGCGCT...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCAGCGCACTGAGCTCCTaGGTGGGGCCCCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVSALSS*VGPPQA
Trigger: GGCCTGCGGGGGCCCCACGCAGGAGCTCAGTGCGCT...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGCCCAAGCGCACTGAGCTCCTaGGTGGGGCCCCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSTWYTAPGAASCSWLSPSALSS*VGPPQA
Trigger: GGCCTGCGGGGGCCCCACGCAGGAGCTCAGTGCGCT...TGGGCTCAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCGCTCCTCATCCTGGGTaGCCCCGGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPAAPHPG*PRLVVL
Trigger: CAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGC...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp AGTGGAAGTCCCGCAGCTTCTCCAGGTTGCCAAAGAGGTGGGCACGCTGACCGCAGGGGCTTCCGCGGCTaGATGAGCCGACGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGSPAASPGCQRGGHADRRGFRG*MSRREG
Trigger: CCCCTCCCGTCGGCTCATTCAGCCGCGGAAGCCCCT...GCGGTCAGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCGGGACTTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCCTCCCGCAGCGCACTaGGCTCCTGCGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLPPAAH*APAWGP
Trigger: GGGGCCCCACGCAGGAGCTCAGTGCGCTGCGGGAGG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCCTCCCGCAGCGCACTaGGCTCCTGCGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFPPAAH*APAWGP
Trigger: GGGGCCCCACGCAGGAGCTCAGTGCGCTGCGGGAGG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCAGGCCCTGGCCTTGTTaGAGGGCCTACCGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: DLLLVQSRAQTQGKSSRPRPWPC*RAYRAP
Trigger: GGGCGCGCGGTAGGCCCTGCAACAAGGCCAGGGCCT...GGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACAGAGGTCTTGGGCCAGGAGGCAGTCAGCAGGCTTAGGGAGGCCGGATCCATGGGCCTCTGCTCCGTaGGCGCCCACCCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QQRSWARRQSAGLGRPDPWASAP*APTLSV
Trigger: GACGCTGAGGGTGGGCGCGCACGGAGCAGAGGCCCA...TGGATCCGGCCTCCCTAAGCCTGCTGACTGCCTCCTGGCCCAAGACCTCTGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGGGAGGGTGGGCAGGTaGAGCGGGGACCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMGRVGR*SGDLAD
Trigger: GTCAGCCAGGTCCCCGCTGCACCTGCCCACCCTCCC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCATACCTTGGGGAGCTGGGCCTaGAGCCAGCCAGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KQHCPALDIPSPWQGGHTLGSWA*SQPGVA
Trigger: AGCCACCCCTGGCTGGCTCCAGGCCCAGCTCCCCAA...GGTATGGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTTGTGGCGCCCAGTGCGTGTGCCCAGGCCCATaGTCCCTGGGGAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AAAPQKGRCGARTCGAQCVCPGP*SLGRGG
Trigger: GCCCCCTCTCCCCAGGGACCATGGGCCTGGGCACAC...GCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGCCCAGCGGCACTCCTaGCGGATGGCCTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMAQRHS*RMASEP
Trigger: GGGCTCAGAGGCCATCCGCCAGGAGTGCCGCTGGGC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGCCAGCCAGGTGTCCTaGCACCGCGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCASQVS*HRAQAQ
Trigger: CTGGGCCTGGGCGCGGTGCCAGGACACCTGGCTGGC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGCTCCTGGGGTTGCCGTaGGGACTGGGGAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: RWHRWAKALENSVSWARRLLGLP*GLGKTP
Trigger: GGGAGTCTTCCCCAGTCCTCACGGCAACCCCAGGAG...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCAGGGGCTTCCGCGGCTaGATGAGCCGACGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCRGFRG*MSRREG
Trigger: CCCCTCCCGTCGGCTCATTCAGCCGCGGAAGCCCCT...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCGGCTGGGTCTCAGTGTaGACCGCGCTGAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPAGWVSV*TALKTV
Trigger: GACTGTCTTCAGCGCGGTTCACACTGAGACCCAGCC...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCTGGCGGATGGCCTCTaGGCCCAGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLLADGL*AQPRGQ
Trigger: CTGGCCACGGGGCTGGGCTCAGAGGCCATCCGCCAG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAACTGGCGGATGGCCTCTaGGCCCAGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMELADGL*AQPRGQ
Trigger: CTGGCCACGGGGCTGGGCTCAGAGGCCATCCGCCAG...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACCTCCCGCAGCGCACTaGGCTCCTGCGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPPPAAH*APAWGP
Trigger: GGGGCCCCACGCAGGAGCTCAGTGCGCTGCGGGAGG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGCTCACGGCCACGCTCTaGAGGCCCATGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKLTATL*RPMPVG
Trigger: CCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAG...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCACGCCCGTGGGCCTCTaGTCCGTGCGCGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGTPVGL*SVRAHP
Trigger: AGGGTGGGCGCGCACGGAGCAGAGGCCCACGGGCGT...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGGGAGGGTGGGCAGGTaGAGCGGGGACCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGGRVGR*SGDLAD
Trigger: GTCAGCCAGGTCCCCGCTGCACCTGCCCACCCTCCC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGTGGTGGGTGCCGGGTaGAAGCCTCCAGCTCACGCA +
Preference number: 4 (lower is better)
Translates to: RWHRWAKALENSVSWARRVVGAG*KPPAHA
Trigger: TGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCAC...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTAGCGCACTGAGCTCCTaGGTGGGGCCCCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPSALSS*VGPPQA
Trigger: GGCCTGCGGGGGCCCCACGCAGGAGCTCAGTGCGCT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCCTGGCCGCCCAGCTCTaGCTCAGCCTCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVLAAQL*LSLQCC
Trigger: GCAGCACTGGAGGCTGAGGCAGAGCTGGGCGGCCAG...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTGGCCGCCCAGCTCTaGCTCAGCCTCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DLLLVQSRAQTQGKSSRPLAAQL*LSLQCC
Trigger: GCAGCACTGGAGGCTGAGGCAGAGCTGGGCGGCCAG...GGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCGGTGGCCCCGGCTGGTaGTCTTGGAGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GQQALRRQLLQLQPGRHFGGPGW*SWRTWV
Trigger: GACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACC...GAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGGCATCCGCCAGCCGCTaGCACCGCTGGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKASASR*HRWAKA
Trigger: GGCTTTGGCCCAGCGGTGCCAGCGGCTGGCGGATGC...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGCATCCGCCAGCCGCTaGCACCGCTGGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCASASR*HRWAKA
Trigger: GGCTTTGGCCCAGCGGTGCCAGCGGCTGGCGGATGC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGCCCAGCGGCACTCCTaGCGGATGGCCTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAAQRHS*RMASEP
Trigger: GGGCTCAGAGGCCATCCGCCAGGAGTGCCGCTGGGC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCCATACTCCCGCTCCGTaGCCACCATCTCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPAHTPAP*PPSLPA
Trigger: TGCTGGCAGAGATGGTGGCCACGGAGCGGGAGTATG...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
3UTR CAA 72 bp GCAGGCCTCCTCCTAGCGAAGTGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACT +
Preference number: 4 (lower is better)
Translates to: AGLLLAKWAAPP*GCGSAGSEKAT
Trigger: AGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CAA 72 bp AGGCTGGAGGCCTGCAGCACAAAGGTGTCCCTGGCCTaGCGGCGGCGGAACCAGATCTCGAAGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RLEACSTKVSLA*RRRNQISKRRL
Trigger: CAACCTGCGCTTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCCTCCAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTCAGAGACAGGTCGCATaGTCCCACGTGGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: APPLGCGSAGSEKATAPAQRQVA*SHVGWG
Trigger: GCCCCATCCCACGTGGGATCATGCGACCTGTCTCTG...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGTCGGTGGCATGGCCCTaGGAGTCTGGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: RWHRWAKALENSVSWARRSVAWP*ESGDSS
Trigger: GGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGA...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCACAGCAGGAGGCGGATaGGTTCCTGGCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: HRSSTARPWTSRVPGKVATAGGG*VPGCCT
Trigger: AGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGT...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp GTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCTGGCGGATGGCCTCTaGGCCCAGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VFAGCSAGSVGAAIHPPGLADGL*AQPRGQ
Trigger: CTGGCCACGGGGCTGGGCTCAGAGGCCATCCGCCAG...ACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCCTCCCGCAGCGCACTaGGCTCCTGCGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYPPAAH*APAWGP
Trigger: GGGGCCCCACGCAGGAGCTCAGTGCGCTGCGGGAGG...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCTGAGCCCCACAGTGTaGCCAGGCCCATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMLSPTV*PGPWSL
Trigger: CAGGGACCATGGGCCTGGGCACACTGTGGGGCTCAG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTCGGCAGCTCCACCGTaGCCACTCCCCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVSAAPP*PLPGPG
Trigger: GCCAGGCCCGGGGAGTGGGCACGGTGGAGCTGCCGA...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCACAAGGTGCGGGCCCTaGAGCAACCCCCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVTRCGP*SNPRPP
Trigger: CGGCGGGCGGGGGTTGCTGCAGGGCCCGCACCTTGT...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGACGGGGCACAGCCCTaGCGGCGCGGAAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGDGAQP*RRGRQG
Trigger: ACCTTGTCTTCCGCGCCGGCAGGGCTGTGCCCCGTC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAACGCCCGTGGGCCTCTaGTCCGTGCGCGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGTPVGL*SVRAHP
Trigger: AGGGTGGGCGCGCACGGAGCAGAGGCCCACGGGCGT...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCACACAGAAGCAGCACTaGCCGGCCTTGGACATCCCG +
Preference number: 4 (lower is better)
Translates to: HRSSTARPWTSRVPGKVATQKQH*PALDIP
Trigger: CGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGT...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGGGAGGGTGGGCAGGTaGAGCGGGGACCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLGRVGR*SGDLAD
Trigger: GTCAGCCAGGTCCCCGCTGCACCTGCCCACCCTCCC...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGCCACTCGTGGTGGGTaGCGGGTGCAAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAATRGG*RVQASS
Trigger: GCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGCCACTCGTGGTGGGTaGCGGGTGCAAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LELQAAGSTARPVPGSDTATRGG*RVQASS
Trigger: GCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGC...TGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAAGCGCACTGAGCTCCTaGGTGGGGCCCCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGSALSS*VGPPQA
Trigger: GGCCTGCGGGGGCCCCACGCAGGAGCTCAGTGCGCT...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCAGGCCCATGGTCCCTaGGGAGAGGGGGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFQAHGP*GEGAPG
Trigger: ACCCGGTGCCCCCTCTCCCCAGGGACCATGGGCCTG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCGTGTGCCCAGGCCCATaGTCCCTGGGGAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFVCPGP*SLGRGG
Trigger: GCCCCCTCTCCCCAGGGACCATGGGCCTGGGCACAC...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCTCGCAGTGCGTGGGTTaGGGCAGCGACCAACGGTCG +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVSQCVG*GSDQRS
Trigger: CGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGA...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGTGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMCRRRA*AAGGAS
Trigger: ACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCA...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGGTGGCCCCGGCTGGTaGTCTTGGAGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAGGPGW*SWRTWV
Trigger: GACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCCTGGGTGGCCCCGGCTaGTGGTCTTGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGLGGPG*WSWRTW
Trigger: CCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAG...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGCTCCTCATCCTGGGTaGCCCCGGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMAPHPG*PRLVVL
Trigger: CAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCTGCAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGGAACCAGATCTCGAACGCCCTGCTTGGACCTaGGTCCCCTACCAACCCTAC +
Preference number: 4 (lower is better)
Translates to: GLQHKGVPGLAAAEPDLERPAWT*VPYQPY
Trigger: GTAGGGTTGGTAGGGGACCCAGGTCCAAGCAGGGCG...TTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp AGTGGAAGTCCCGCAGCTTCTCCAGGTTGCCAAAGAGGTGGGCACGCTGACCGCAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGSPAASPGCQRGGHADRSTARP*TSRVPG
Trigger: GCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCT...GCGGTCAGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCGGGACTTCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAGCCAGGCTGGGCTGTaGGCACACAGAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LLAKWAAPPLGCGSAGSESQAGL*AHRSST
Trigger: AGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCT...CTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGGGGCAGCCCCGCCGTTaGGATGTGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKGQPRR*DVGQQA
Trigger: AGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCC...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMLLLAK*AAPPLG
Trigger: TCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCAGCCAGGTGTCCTaGCACCGCGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAASQVS*HRAQAQ
Trigger: CTGGGCCTGGGCGCGGTGCCAGGACACCTGGCTGGC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGCAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGGAACCAGATCTCGAAGCGCAGTCAAAGAGGGCTaGCCGCCCAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PAAQRCPWPCGGGTRSRSAVKEG*PPSSAS
Trigger: TGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGC...GCTTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGGCCACAGGCTATAGCTaGCCTGGCACCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLATGYS*PGTLGT
Trigger: TGTGCCCAGGGTGCCAGGTCAGCTATAGCCTGTGGC...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CAACAGAGGTCTTGGGCCAGGAGGCAGTCAGCAGGCTTAGGGAGGCCGGATCCACCATCCGGGTGGGAGTaGGACCAATGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QQRSWARRQSAGLGRPDPPSGWE*DQWVEL
Trigger: CAGCTCCACCCATTGGTCTCACTCCCACCCGGATGG...TGGATCCGGCCTCCCTAAGCCTGCTGACTGCCTCCTGGCCCAAGACCTCTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGGAAGGCCGCGTGGGTaGGCGAGGGTGAGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSGRPRG*ARVSAR
Trigger: CCGCGCACTCACCCTCGCTCACCCACGCGGCCTTCC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGGAAGGCCGCGTGGGTaGGCGAGGGTGAGTGCGCGG +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYGRPRG*ARVSAR
Trigger: CCGCGCACTCACCCTCGCTCACCCACGCGGCCTTCC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp TGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTGCTGCACTCAGACTaGAGCCAGGCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGSAGSEKATAPAAARKALLHSD*SQAGLW
Trigger: CCACAGCCCAGCCTGGCTTCAGTCTGAGTGCAGCAG...TGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGTCTGCTGTAGCAGCTaGCCGACCTCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGVCCSS*PTSPGS
Trigger: GGAGCCTGGGGAGGTCGGTCAGCTGCTACAGCAGAC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCGCACGGACTTGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGGGCAGGCAGGTTCACTaGGACTCTGCCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: AHGLVAPSAHHKLILSHQGRQVH*DSAPDS
Trigger: GGAATCTGGGGCAGAGTCTCAGTGAACCTGCCTGCC...CTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACCTCCCGCAGCGCACTaGGCTCCTGCGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQPPAAH*APAWGP
Trigger: GGGGCCCCACGCAGGAGCTCAGTGCGCTGCGGGAGG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTACCCGGGCTTCAGCCTaGGTAGGGTCAGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPTRASA*VGSETS
Trigger: GGAGGTCTCTGACCCTACTCAGGCTGAAGCCCGGGT...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GGCCTGCAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGGAACCAGATCTCGAACTCCACAAAGTCCGGTaGAGGAGGCTGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLQHKGVPGLAAAEPDLELHKVR*RRLVLR
Trigger: CCTCAGCACCAGCCTCCTGCACCGGACTTTGTGGAG...TTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTAGGGAAGCGGGGTGCTaGCTCGCCGCGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAREAGC*LAAGTQ
Trigger: CTGGGTGCCCGCGGCGAGGCAGCACCCCGCTTCCCT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTTCGGCAGCTCCACCGTaGCCACTCCCCGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTASAAPP*PLPGPG
Trigger: GCCAGGCCCGGGGAGTGGGCACGGTGGAGCTGCCGA...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGACAAGGTGCGGGCCCTaGAGCAACCCCCGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SAGSVGAAIHPPGHIARQTRCGP*SNPRPP
Trigger: CGGCGGGCGGGGGTTGCTGCAGGGCCCGCACCTTGT...CTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGCGCGGAAGACAAGGTaGGGGCCCTGCAGCAACCCC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGARKTR*GPCSNP
Trigger: GGGGTTGCTGCAGGGCCCGCACCTTGTCTTCCGCGC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCAGGCCCTGGCCTTGTTaGAGGGCCTACCGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVRPWPC*RAYRAP
Trigger: GGGCGCGCGGTAGGCCCTGCAACAAGGCCAGGGCCT...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCTCACGGCCACGCTCTaGAGGCCCATGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVLTATL*RPMPVG
Trigger: CCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCCCGTGGGCCTCTaGTCCGTGCGCGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSTPVGL*SVRAHP
Trigger: AGGGTGGGCGCGCACGGAGCAGAGGCCCACGGGCGT...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLGLSGQ*RRRAWA
Trigger: GGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCC...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp GGCCTGCAGCACAAAGGTGTCCCTGGCCTTGCGGCGGCGGAACCAGATCTCGAACACTGTCAGTCCCAGTaGCTGTACTTCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLQHKGVPGLAAAEPDLEHCQSQ*LYFGPG
Trigger: CCCAGGCCCGAAGTACAGGCACTGGGACTGACAGTG...TTCGAGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCCCAGCCTCCTCCAGTaGTGGCCAGCCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPPSLLQ*WPAHLL
Trigger: CAGCAGGTGGGCTGGCCAGCACTGGAGGAGGCTGGG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGTCCCCTTGCCTGACCTaGTCCTGGGCAACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RWHRWAKALENSVSWARRSPCLT*SWATWY
Trigger: GTACCAGGTTGCCCAGGAGCAGGTCAGGCAAGGGGA...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTTCTGCCAACACTCGCTaGCCCTCCTCAGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPSANTR*PSSAHV
Trigger: GACGTGGGCTGAGGAGGGGCAGCGAGTGTTGGCAGA...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGTGCAGCTGCAGCTGCTaGAACACAACCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMCSCSC*NTTPGR
Trigger: ACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCA...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCTGCAGCTGCAGCTGCTaGAACACAACCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVCSCSC*NTTPGR
Trigger: ACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCA...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCGGAGGCAAGTCAGGGTaGCTGGTCCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVGGKSG*LVQCSC
Trigger: GCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCC...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGAGGCACAGTAGGGGATaGCTGGGGCAGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGRHSRG*LGQGTS
Trigger: GGAGGTGCCCTGCCCCAGGCATCCCCTACTGTGCCT...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAACTGGCCGCCCAGCTCTaGCTCAGCCTCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMELAAQL*LSLQCC
Trigger: GCAGCACTGGAGGCTGAGGCAGAGCTGGGCGGCCAG...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: HRSSTARPWTSRVPGKVAPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTTGGGGAGCTGGGCCTaGAGCCAGCCAGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWLGSWA*SQPGVA
Trigger: AGCCACCCCTGGCTGGCTCCAGGCCCAGCTCCCCAA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CCAAAGCAGGTGGGAGATGTCAGCTGTCCAGGCCTGCTTGATAGCCAGGCTGGAGCTGAGGTGGGGTTCTaGAGCCAGAGCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PKQVGDVSCPGLLDSQAGAEVGF*SQSPQP
Trigger: GGGCTGGGGGCTCTGGCTCCAGAACCCCACCTCAGC...TCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTCCCACCTGCTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCGGCGTCGCAGTGCGTaGGTTGGGGCAGCGACCAAC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLRRRSA*VGAATN
Trigger: GTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGCRRRA*AAGGAS
Trigger: ACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCA...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCAGGTGGCCATACCACTaGCCAGCAGCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: HRSSTARPWTSRVPGKVARWPYH*PAAPNR
Trigger: TCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCT...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGGGCAGCCCCGCCGTTaGGATGTGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGGQPRR*DVGQQA
Trigger: AGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGGGGCAGCCCCGCCGTTaGGATGTGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWGQPRR*DVGQQA
Trigger: AGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCC...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGLLLAK*AAPPLG
Trigger: TCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAG...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGTGCCTGACCTGCTCCTaGGCAACCTGGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RWHRWAKALENSVSWARRCLTCS*ATWYSS
Trigger: GGAGCTGTACCAGGTTGCCCAGGAGCAGGTCAGGCA...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGGCACTCCTGGCGGATaGCCTCTGAGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVGTPGG*PLSPAP
Trigger: CGGGGCTGGGCTCAGAGGCCATCCGCCAGGAGTGCC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGCACTCCTGGCGGATaGCCTCTGAGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAGTPGG*PLSPAP
Trigger: CGGGGCTGGGCTCAGAGGCCATCCGCCAGGAGTGCC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCGCCCAGCGGCACTCCTaGCGGATGGCCTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAAQRHS*RMASEP
Trigger: GGGCTCAGAGGCCATCCGCCAGGAGTGCCGCTGGGC...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCCAGCCAGGTGTCCTaGCACCGCGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYASQVS*HRAQAQ
Trigger: CTGGGCCTGGGCGCGGTGCCAGGACACCTGGCTGGC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAGCCAGCCAGGTGTCCTaGCACCGCGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATASQVS*HRAQAQ
Trigger: CTGGGCCTGGGCGCGGTGCCAGGACACCTGGCTGGC...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAATAGTGGCCGCATaGTGGCAGTGGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: APPLGCGSAGSEKATAPAAIVAA*WQWQAG
Trigger: ACCTGCCTGCCACTGCCACCATGCGGCCACTATTGC...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCACAGTAGGGGATGCCTaGGGCAGGGCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVTVGDA*GRAPPP
Trigger: TGGAGGAGGTGCCCTGCCCCAGGCATCCCCTACTGT...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCGCACGGACTTGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGGTCAGAGCTGCCTGGTaGAGGCACAGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: AHGLVAPSAHHKLILSHQVRAAW*RHSRGC
Trigger: GCATCCCCTACTGTGCCTCCACCAGGCAGCTCTGAC...CTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGGCATAGGCCACTCGTaGTGGGTGCCGGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAGIGHS*WVPGAS
Trigger: GCTTGCACCCGGCACCCACCACGAGTGGCCTATGCC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGGGCATAGGCCACTCGTaGTGGGTGCCGGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKGIGHS*WVPGAS
Trigger: GCTTGCACCCGGCACCCACCACGAGTGGCCTATGCC...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCGGCGCACGGACTTGTaGCGCCCAGTGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFRRTDL*RPVRTT
Trigger: TGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCGGCGCACGGACTTGTaGCGCCCAGTGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLRRTDL*RPVRTT
Trigger: TGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGCCCAACCCCTGTGGGCCCATaGCGAGGCTTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSTWYTAPGAASCSWLSPTPVGP*RGLLKS
Trigger: GCTCTTCAGCAAGCCTCGCCATGGGCCCACAGGGGT...TGGGCTCAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGCACAAAGGTGTCCCTaGCCTTGCGGCGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGAQRCP*PCGGGT
Trigger: GGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTT +
Preference number: 4 (lower is better)
Translates to: RWHRWAKALENSVSWARRTGLRQ*TPESEL
Trigger: AAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGT...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCTCCTGGGGTTGCCGTaGGGACTGGGGAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFLLGLP*GLGKTP
Trigger: GGGAGTCTTCCCCAGTCCTCACGGCAACCCCAGGAG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTTCCGCGGCTGAATaGGCCGACGGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAASAAE*ADGRGR
Trigger: CCTTCCCCTCCCGTCGGCTCATTCAGCCGCGGAAGC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGGGCTGGGTCTCAGTGTaGACCGCGCTGAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLGWVSV*TALKTV
Trigger: GACTGTCTTCAGCGCGGTTCACACTGAGACCCAGCC...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp TGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGACAGCAGGAGGCGGATaGGTTCCTGGCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: WSCRLLDLLLVQSRAQTQTAGGG*VPGCCT
Trigger: AGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGT...CTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACTGGCGGATGGCCTCTaGGCCCAGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQLADGL*AQPRGQ
Trigger: CTGGCCACGGGGCTGGGCTCAGAGGCCATCCGCCAG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCCCAGCTGTAGCCTGTTaGGGCTCCTGGGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAPAVAC*GSWGQS
Trigger: GCTCTGACCCCAGGAGCCTCAACAGGCTACAGCTGG...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCTGAGCCCCACAGTGTaGCCAGGCCCATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPLSPTV*PGPWSL
Trigger: CAGGGACCATGGGCCTGGGCACACTGTGGGGCTCAG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGCACGTGGGATGGGGCTaGCATCCGGGTGGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: FRWPPGAGHKLPGSSVVEHVGWG*HPGGSE
Trigger: CTCACTCCCACCCGGATGGCAGCCCCATCCCACGTG...CTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTGTAGGGAAGCGGGGTaGTGCCTCGCCGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSCREAG*CLAAGT
Trigger: GGTGCCCGCGGCGAGGCAGCACCCCGCTTCCCTACA...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGGCCCTGGCCTTGTTaGAGGGCCTACCGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSRPWPC*RAYRAP
Trigger: GGGCGCGCGGTAGGCCCTGCAACAAGGCCAGGGCCT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCTCACGGCCACGCTCTaGAGGCCCATGCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSLTATL*RPMPVG
Trigger: CCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTTGGGCCTCTGCTCCGTaGGCGCCCACCCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSAWASAP*APTLSV
Trigger: GACGCTGAGGGTGGGCGCGCACGGAGCAGAGGCCCA...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCCACTGTCAGTCCCAGTaGCTGTACTTCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVHCQSQ*LYFGPG
Trigger: CCCAGGCCCGAAGTACAGGCACTGGGACTGACAGTG...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACAGAGGTCTTGGGCCAGGAGGCAGTCAGCAGGCTTAGGGAGGCCGGATCCACACTGTCAGTCCCAGTaGCTGTACTTCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QQRSWARRQSAGLGRPDPHCQSQ*LYFGPG
Trigger: CCCAGGCCCGAAGTACAGGCACTGGGACTGACAGTG...TGGATCCGGCCTCCCTAAGCCTGCTGACTGCCTCCTGGCCCAAGACCTCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCGAGTCTAGCACCTGCTaGATCAGGACCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HRSSTARPWTSRVPGKVAESSTC*IRTSVC
Trigger: GCAGACAGAGGTCCTGATGCAGCAGGTGCTAGACTC...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp GATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCGGCCAGCCCACCTGCTaGAGCCACACTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: DLLLVQSRAQTQGKSSRPGQPTC*SHTSIW
Trigger: CCAGATTGAAGTGTGGCTGCAGCAGGTGGGCTGGCC...GGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCCCAGCCTCCTCCAGTaGTGGCCAGCCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSRASSVWTNSRACIRWLPSLLQ*WPAHLL
Trigger: CAGCAGGTGGGCTGGCCAGCACTGGAGGAGGCTGGG...CAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp GGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCTCCCCTTGCCTGACCTaGTCCTGGGCAACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GQQALRRQLLQLQPGRHFSPCLT*SWATWY
Trigger: GTACCAGGTTGCCCAGGAGCAGGTCAGGCAAGGGGA...GAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGGGAGGGTGGGCAGGTaGAGCGGGGACCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERGRVGR*SGDLAD
Trigger: GTCAGCCAGGTCCCCGCTGCACCTGCCCACCCTCCC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAGGGAGGGTGGGCAGGTaGAGCGGGGACCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATGRVGR*SGDLAD
Trigger: GTCAGCCAGGTCCCCGCTGCACCTGCCCACCCTCCC...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCGGTTCACTGAGACTCTaGCCCAGATTCCGATCGAAG +
Preference number: 4 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPAGSLRL*PRFRSK
Trigger: CTTCGATCGGAATCTGGGGCAGAGTCTCAGTGAACC...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCGTGGTGGGTGCCGGGTaGAAGCCTCCAGCTCACGCA +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFVVGAG*KPPAHA
Trigger: TGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCAC...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGTGGTGGGTGCCGGGTaGAAGCCTCCAGCTCACGCA +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGVVGAG*KPPAHA
Trigger: TGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCAC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCGCCCGTGCCAGCTCCTaGAGCAGCAGTGCGTACTTG +
Preference number: 4 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGARASS*SSSAYL
Trigger: CAAGTACGCACTGCTGCTGCAGGAGCTGGCACGGGC...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACTGGCCGCCCAGCTCTaGCTCAGCCTCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPLAAQL*LSLQCC
Trigger: GCAGCACTGGAGGCTGAGGCAGAGCTGGGCGGCCAG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTCTGGCCGCCCAGCTCTaGCTCAGCCTCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQALAAQL*LSLQCC
Trigger: GCAGCACTGGAGGCTGAGGCAGAGCTGGGCGGCCAG...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTGCCAGAGGGGAGCCTTaGAGTTGTCCTGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPARGEP*SCPAPS
Trigger: GGATGGAGCAGGACAACTCCAAGGCTCCCCTCTGGC...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACAGGCCCATGGTCCCTaGGGAGAGGGGGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATQAHGP*GEGAPG
Trigger: ACCCGGTGCCCCCTCTCCCCAGGGACCATGGGCCTG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCGGTTGCCGTGAGGACTaGGGAAGACTCCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: HRSSTARPWTSRVPGKVAGCRED*GRLPVL
Trigger: TAACACAGGGAGTCTTCCCCAGTCCTCACGGCAACC...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACGGCGTCGCAGTGCGTaGGTTGGGGCAGCGACCAAC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGRRRSA*VGAATN
Trigger: GTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGGGCGGCCCCGCCATaGCACCACGATGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVGAAPP*HHDASG
Trigger: ACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCC...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGCRRRA*AAGGAS
Trigger: ACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCA...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGGTGGCCCCGGCTGGTaGTCTTGGAGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGGGPGW*SWRTWV
Trigger: GACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACC...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACTGGGTGGCCCCGGCTaGTGGTCTTGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTLGGPG*WSWRTW
Trigger: CCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCTGGGTGGCCCCGGCTaGTGGTCTTGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVLGGPG*WSWRTW
Trigger: CCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGTCTACTGTGCCCCTCTaGGCATCCCCCGACTCATCT +
Preference number: 4 (lower is better)
Translates to: PLAPLGQSPREFSQLGSQSTVPL*ASPDSS
Trigger: AGATGAGTCGGGGGATGCCCAGAGGGGCACAGTAGA...CTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCTGGCATCGCCCTGCTTaGACCTGGGTCCCCTACCAA +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVWHRPA*TWVPYQ
Trigger: TTGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCA...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTGAGTCCCTGGCAAGGTaGCCATACCACTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPESLAR*PYHWPA
Trigger: TGCTGGCCAGTGGTATGGCCACCTTGCCAGGGACTC...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLSTARP*TSRVPG
Trigger: GCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCT...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: APPLGCGSAGSEKATAPARLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGGGCAGCCCCGCCGTTaGGATGTGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLGQPRR*DVGQQA
Trigger: AGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCLLLAK*AAPPLG
Trigger: TCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCCTTCACACTTTCGATaGCCCCCTGGAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMPSHFR*PPGAGH
Trigger: GTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTCGGGCCTCCAGTGTTTaGACCAACTCTAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: APPLGCGSAGSEKATAPARASSV*TNSRAC
Trigger: ACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCG...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGCATCCGCCAGCCGCTaGCACCGCTGGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVASASR*HRWAKA
Trigger: GGCTTTGGCCCAGCGGTGCCAGCGGCTGGCGGATGC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGCAAGTCAGGGTGCCTaGTCCAGTGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMASQGA*SSAAAA
Trigger: AGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGCCCAGCGGCACTCCTaGCGGATGGCCTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSAQRHS*RMASEP
Trigger: GGGCTCAGAGGCCATCCGCCAGGAGTGCCGCTGGGC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGGTGCAGCGGGGACCTaGCTGACACACAGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCGAAGT*LTHRLA
Trigger: AGCTAGCCTGTGTGTCAGCCAGGTCCCCGCTGCACC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCGCAATAGTGGCCGCATaGTGGCAGTGGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVAIVAA*WQWQAG
Trigger: ACCTGCCTGCCACTGCCACCATGCGGCCACTATTGC...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGACCTCCTCCAGCCTCTaGTCTGCGGCAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLTSSSL*SAAGSN
Trigger: ATTGCTGCCTGCCGCAGACCAGAGGCTGGAGGAGGT...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCGTCAGAGCTGCCTGGTaGAGGCACAGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVVRAAW*RHSRGC
Trigger: GCATCCCCTACTGTGCCTCCACCAGGCAGCTCTGAC...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCATACTCCCGCTCCGTaGCCACCATCTCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMHTPAP*PPSLPA
Trigger: TGCTGGCAGAGATGGTGGCCACGGAGCGGGAGTATG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGAGGCCAGGTCCAGGTaGTCCCCCAGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCEARSR*SPSACC
Trigger: GCAGCAAGCACTGGGGGACCACCTGGACCTGGCCTC...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCGGCGCACGGACTTGTaGCGCCCAGTGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALARRTDL*RPVRTT
Trigger: TGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTGGTAGCTTCAGTGAAGCCTCAAGCTTTTGGTCCAGGGCCAGCCAGGTGTCCTCGGCGCACGGACTTGTaGCGCCCAGTGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: VVASVKPQAFGPGPARCPRRTDL*RPVRTT
Trigger: TGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCG...AGGACACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTCACTGAAGCTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCGCACAAAGGTGTCCCTaGCCTTGCGGCGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFAQRCP*PCGGGT
Trigger: GGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGC...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCGCACCTCCTTGTTGTaGACGGCCTGCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMRTSLL*TACLQS
Trigger: GCTTTGGAGGCAGGCCGTCCACAACAAGGAGGTGCG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGAGCCACTGGAGCCACTaGCTGATGGGCATTGGGACG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMSHWSH*LMGIGT
Trigger: CGTCCCAATGCCCATCAGCCAGTGGCTCCAGTGGCT...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PLAPLGQSPREFSQLGSQGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...CTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGCCACAGGCTATAGCTaGCCTGGCACCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCATGYS*PGTLGT
Trigger: TGTGCCCAGGGTGCCAGGTCAGCTATAGCCTGTGGC...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACCAGGAGAAGACCCTaGGCCCCACAGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWTRRRP*APQCAQ
Trigger: CTGGGCACACTGTGGGGCTCAGGGTCTTCTCCTGGT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCCATCCGGGTGGGAGTaGGACCAATGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCPSGWE*DQWVEL
Trigger: CAGCTCCACCCATTGGTCTCACTCCCACCCGGATGG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCAGAGACAGGTCGCATaGTCCCACGTGGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWQRQVA*SHVGWG
Trigger: GCCCCATCCCACGTGGGATCATGCGACCTGTCTCTG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCTTCCGCGGCTGAATaGGCCGACGGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYASAAE*ADGRGR
Trigger: CCTTCCCCTCCCGTCGGCTCATTCAGCCGCGGAAGC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGAGCCGCGGGGAACCGTaGAGTCGGACAGCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLSRGEP*SRTAFE
Trigger: TTCGAAGGCTGTCCGACTTCACGGTTCCCCGCGGCT...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000563969.5
CDS-3UTR TCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTAGCCGCGGGGAACCGTaGAGTCGGACAGCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPSRGEP*SRTAFE
Trigger: TTCGAAGGCTGTCCGACTTCACGGTTCCCCGCGGCT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000563969.5
CDS-3UTR TCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCACCCTGTGCCAAGCTaGGGTGGGAGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLHPVPS*GGRTWG
Trigger: GCCCCATGTCCTCCCACCTCAGCTTGGCACAGGGTG...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR TCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCTGCTGCACTCAGACTaGAGCCAGGCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFLLHSD*SQAGLW
Trigger: CCACAGCCCAGCCTGGCTTCAGTCTGAGTGCAGCAG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCACAGCAGGAGGCGGATaGGTTCCTGGCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCTAGGG*VPGCCT
Trigger: AGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGT...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACATGGGTCAGCAGGCTCTaGGAAGGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LELQAAGSTARPVPGSDTWVSRL*EGNCSS
Trigger: GCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCA...TGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGTCTGCTGTAGCAGCTaGCCGACCTCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGVCCSS*PTSPGS
Trigger: GGAGCCTGGGGAGGTCGGTCAGCTGCTACAGCAGAC...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGGCAGGCAGGTTCACTaGGACTCTGCCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGGRQVH*DSAPDS
Trigger: GGAATCTGGGGCAGAGTCTCAGTGAACCTGCCTGCC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGGGTGTGCCCATAGCTTaGCATCAGGGCATCGGAGCG +
Preference number: 4 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKGVPIA*HQGIGA
Trigger: CGCTCCGATGCCCTGATGTCAAGCTATGGGCACACC...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCAGGAAAGGCAAGCATaGGGGCCCAGTAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMQERQA*GPSRGG
Trigger: TCCACCTCTACTGGGCCCTCATGCTTGCCTTTCCTG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTTCCCCTGTGCCAAGCTaGGGTGGGAGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQASPVPS*GGRTWG
Trigger: GCCCCATGTCCTCCCACCTCAGCTTGGCACAGGGGA...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450733.5
CDS-3UTR GCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTCCGAGAGCTACAGGTTaGATGGCCCAGGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: APPLGCGSAGSEKATAPAPRATG*MAQDGK
Trigger: TTTGCCATCCTGGGCCATGCAACCTGTAGCTCTCGG...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGACGGGGCACAGCCCTaGCGGCGCGGAAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSDGAQP*RRGRQG
Trigger: ACCTTGTCTTCCGCGCCGGCAGGGCTGTGCCCCGTC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTATGGGCCTCTGCTCCGTaGGCGCCCACCCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLWASAP*APTLSV
Trigger: GACGCTGAGGGTGGGCGCGCACGGAGCAGAGGCCCA...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCGLSGQ*RRRAWA
Trigger: GGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCC...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: FRWPPGAGHKLPGSSVVEGLSGQ*RRRAWA
Trigger: GGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCC...CTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGCAGATGGCATCGCCCTaGTTGGACCTGGGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKQMASP*LDLGPL
Trigger: TAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTG...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGACCTCTGGGACCTCTTaGTTCAGCCATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RWHRWAKALENSVSWARRTSGTS*FSHVSS
Trigger: GGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGT...CCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGGCCAGCCCACCTGCTaGAGCCACACTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAGQPTC*SHTSIW
Trigger: CCAGATTGAAGTGTGGCTGCAGCAGGTGGGCTGGCC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACCCAGCCTCCTCCAGTaGTGGCCAGCCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATPSLLQ*WPAHLL
Trigger: CAGCAGGTGGGCTGGCCAGCACTGGAGGAGGCTGGG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCCCAGCCTCCTCCAGTaGTGGCCAGCCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSPSLLQ*WPAHLL
Trigger: CAGCAGGTGGGCTGGCCAGCACTGGAGGAGGCTGGG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAATGCAGCTGCAGCTGCTaGAACACAACCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMECSCSC*NTTPGR
Trigger: ACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCA...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCAGTGCAGCTGCAGCTaGTGCAACACAACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWQCSCS*CNTTPG
Trigger: CCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCAGGCACAGTAGGGGATaGCTGGGGCAGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVRHSRG*LGQGTS
Trigger: GGAGGTGCCCTGCCCCAGGCATCCCCTACTGTGCCT...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCGTGGTGGGTGCCGGGTaGAAGCCTCCAGCTCACGCA +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVVVGAG*KPPAHA
Trigger: TGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCAC...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGCCACTCGTGGTGGGTaGCGGGTGCAAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVATRGG*RVQASS
Trigger: GCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCCACTCGTGGTGGGTaGCGGGTGCAAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYATRGG*RVQASS
Trigger: GCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGGCAGCAGTGCGTACTTaGCCATGCGCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKAAVRT*PCAGWA
Trigger: AGCCCATCCAGCGCATGGGCAAGTACGCACTGCTGC...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCCCGTGCCAGCTCCTaGAGCAGCAGTGCGTACTTG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLARASS*SSSAYL
Trigger: CAAGTACGCACTGCTGCTGCAGGAGCTGGCACGGGC...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCGCAGCTGGAAGTaGACAAGGCTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGCRSWK*TRLWAS
Trigger: GGAGGCCCAGAGCCTTGTGCACTTCCAGCTGCGGCA...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCCGCAGCTGGAAGTaGACAAGGCTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCCRSWK*TRLWAS
Trigger: GGAGGCCCAGAGCCTTGTGCACTTCCAGCTGCGGCA...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGGTGTCCCTGGCCTTaGGGCGGCGGAACCAGATCT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWRCPWP*GGGTRS
Trigger: AGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGAGGTGTCCCTGGCCTTaGGGCGGCGGAACCAGATCT +
Preference number: 4 (lower is better)
Translates to: FRWPPGAGHKLPGSSVVERCPWP*GGGTRS
Trigger: AGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCT...CTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGTCAGCTGTCCAGGCCTaGTTGATAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMSAVQA*LIARLE
Trigger: CTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGA...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGTTGTTGTGGACGGCCTaGCTCCAAAGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMLLWTA*LQSRWE
Trigger: CTCCCACCTGCTTTGGAGGCAGGCCGTCCACAACAA...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCTTGTTGTGGACGGCCTaGCTCCAAAGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: DLLLVQSRAQTQGKSSRPLLWTA*LQSRWE
Trigger: CTCCCACCTGCTTTGGAGGCAGGCCGTCCACAACAA...GGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCTGGCCGCCCAGCTCTaGCTCAGCCTCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVLAAQL*LSLQCC
Trigger: GCAGCACTGGAGGCTGAGGCAGAGCTGGGCGGCCAG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGGGCACCCTAGTCACTaGCTAGAGGCACATGGTCCC +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGGHPSH*LEAHGP
Trigger: GGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCCAGGGCACAGGAACTaGAATTCAGGCGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAPGHRN*NSGAPG
Trigger: CCCGGGGGCGCCTGAATTGCAGTTCCTGTGCCCTGG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379344.8
CDS-3UTR CCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGCCAGAGGGGAGCCTTaGAGTTGTCCTGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGARGEP*SCPAPS
Trigger: GGATGGAGCAGGACAACTCCAAGGCTCCCCTCTGGC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCCTTCATGAGCAGGTCTaGCTGCCAGAGGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVLHEQV*LPEGSL
Trigger: AAGGCTCCCCTCTGGCAGCCAGACCTGCTCATGAAG...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGAAGGCTGGTGCTGAGGTaGGGTTCTGGAGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGRLVLR*GSGARA
Trigger: GGCTCTGGCTCCAGAACCCCACCTCAGCACCAGCCT...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGATCGCATGATCCCACGTaGGATGGGGCTGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGSHDPT*DGAAIR
Trigger: CCGGATGGCAGCCCCATCCCACGTGGGATCATGCGA...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGCCAGGAAGGCCGCGTaGGTGAGCGAGGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLARKAA*VSEGEC
Trigger: GCACTCACCCTCGCTCACCCACGCGGCCTTCCTGGC...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGTCGCAGTGCGTGGGTTaGGGCAGCGACCAACGGTCG +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLSQCVG*GSDQRS
Trigger: CGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGA...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGGGGCGGCCCCGCCATaGCACCACGATGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSGAAPP*HHDASG
Trigger: ACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGGGGCGGCCCCGCCATaGCACCACGATGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQGAAPP*HHDASG
Trigger: ACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCC...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCTCGAGTGGGACTCAGTaGGCAATGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRASSGTQ*AMQAKG
Trigger: GCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGA...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGGTGGCCCCGGCTGGTaGTCTTGGAGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYGGPGW*SWRTWV
Trigger: GACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGGTGGCCCCGGCTGGTaGTCTTGGAGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSGGPGW*SWRTWV
Trigger: GACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGCTCCTCATCCTGGGTaGCCCCGGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTAPHPG*PRLVVL
Trigger: CAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGCTCCTCATCCTGGGTaGCCCCGGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVAPHPG*PRLVVL
Trigger: CAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGTAGCTCCTCATCCTaGGTGGCCCCGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCCSSSS*VAPAGG
Trigger: ACCACCAGCCGGGGCCACCCAGGATGAGGAGCTACA...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCGCCCTGCTTGGACCTaGGTCCCCTACCAACCCTAC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFRPAWT*VPYQPY
Trigger: GTAGGGTTGGTAGGGGACCCAGGTCCAAGCAGGGCG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGTGGCATCGCCCTGCTTaGACCTGGGTCCCCTACCAA +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKWHRPA*TWVPYQ
Trigger: TTGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCA...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGAGGGCTCAAGCCAGATaGCATCGCCCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKRAQAR*HRPAWT
Trigger: GGTCCAAGCAGGGCGATGCCATCTGGCTTGAGCCCT...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGAGGCCGGATCCACTaGGGGCTGCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLGGRIH*GLPPAA
Trigger: AGCTGCTGGAGGCAGCCCCCAGTGGATCCGGCCTCC...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGGAGGCCGGATCCACTaGGGGCTGCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSGGRIH*GLPPAA
Trigger: AGCTGCTGGAGGCAGCCCCCAGTGGATCCGGCCTCC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGGAGGCCGGATCCACTaGGGGCTGCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVGGRIH*GLPPAA
Trigger: AGCTGCTGGAGGCAGCCCCCAGTGGATCCGGCCTCC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALASTARP*TSRVPG
Trigger: GCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGAGCCAGGCTGGGCTGTaGGCACACAGAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKSQAGL*AHRSST
Trigger: AGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCT...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAPTSST*YTAPGA
Trigger: AGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGPTSST*YTAPGA
Trigger: AGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGGGCAGCCCCGCCGTTaGGATGTGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVGQPRR*DVGQQA
Trigger: AGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAGGGCAGCCCCGCCGTTaGGATGTGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEGQPRR*DVGQQA
Trigger: AGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCC...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLLSMAP*SRAQAA
Trigger: GGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCCAGGCTCCATGGGCTaGGGCACAGCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGPGSMG*GTAFTL
Trigger: AAGTGTGAAGGCTGTGCCCCAGCCCATGGAGCCTGG...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGTGCCGTCCTGTAGTCTaGGCTCAGGGTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKCRPVV*AQGHLW
Trigger: CCAGAGGTGACCCTGAGCCCAGACTACAGGACGGCA...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CCGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGAGGGCCTGTATTCGCTaGTTGCTCTGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PLAPLGQSPREFSQLGSQRACIR*LLCRVS
Trigger: ACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCT...CTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp GCGCACGGACTTGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGGAGAATTCAGTCAGCTaGGCTCGCAGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: AHGLVAPSAHHKLILSHQENSVS*ARRARK
Trigger: CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTC...CTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGGCACTCCTGGCGGATaGCCTCTGAGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLGTPGG*PLSPAP
Trigger: CGGGGCTGGGCTCAGAGGCCATCCGCCAGGAGTGCC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCAGCCAGGTGTCCTaGCACCGCGCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSASQVS*HRAQAQ
Trigger: CTGGGCCTGGGCGCGGTGCCAGGACACCTGGCTGGC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGATAGTGGCCGCATGGTaGCAGTGGCAGGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMIVAAW*QWQAGS
Trigger: TGAACCTGCCTGCCACTGCCACCATGCGGCCACTAT...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGCAATAGTGGCCGCATaGTGGCAGTGGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAAIVAA*WQWQAG
Trigger: ACCTGCCTGCCACTGCCACCATGCGGCCACTATTGC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGCAATAGTGGCCGCATaGTGGCAGTGGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCAIVAA*WQWQAG
Trigger: ACCTGCCTGCCACTGCCACCATGCGGCCACTATTGC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCTCACGCAGGAAGAAGTaGCAGTGGAAGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVSRRKK*QWKSRS
Trigger: GCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGA...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGAGGCCAGGTCCAGGTaGTCCCCCAGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVEARSR*SPSACC
Trigger: GCAGCAAGCACTGGGGGACCACCTGGACCTGGCCTC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTGAGGCCAGGTCCAGGTaGTCCCCCAGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CSPLSRASSVWTNSRACIEARSR*SPSACC
Trigger: GCAGCAAGCACTGGGGGACCACCTGGACCTGGCCTC...AATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTAAGTGCACAAGGCTCTaGGCCTCCCGCAGCGCACTG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPKCTRL*ASRSAL
Trigger: CAGTGCGCTGCGGGAGGCCCAGAGCCTTGTGCACTT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCTTTCCGTGCCGCAGCTaGAAGTGCACAAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVFPCRS*KCTRLW
Trigger: CCAGAGCCTTGTGCACTTCCAGCTGCGGCACGGAAA...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCGGCGCACGGACTTGTaGCGCCCAGTGCGCACCACA +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSRRTDL*RPVRTT
Trigger: TGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCATGTGTCAACCCCTGTaGGCCCATGGCGAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAMCQPL*AHGEAC
Trigger: GCAAGCCTCGCCATGGGCCCACAGGGGTTGACACAT...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTT +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRATGLRQ*TPESEL
Trigger: AAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGT...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp TTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTT +
Preference number: 4 (lower is better)
Translates to: LELQAAGSTARPVPGSDTTGLRQ*TPESEL
Trigger: AAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGT...TGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCRLLDLLLVQSRAQTQGGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...ACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLAPLGQSPREFSQLGSQVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...CTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGTTCTTCCTGAGGGGTaGGGGCACCCTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCVLPEG*GHPSHC
Trigger: GCAGTGACTAGGGTGCCCCCACCCCTCAGGAAGAAC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGTTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLAKWAAPPLGCGSAGSEFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...CTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGAGATCAAAGAGGGCTaGCCGCCCAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAEIKEG*PPSSAS
Trigger: TGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGATCTC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567136.1
CDS-3UTR TCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGCTACCCCTGCCCTCCTaGGGCTCCACATCTATGTAT +
Preference number: 4 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLLPLPS*GSTSMY
Trigger: ATACATAGATGTGGAGCCTCAGGAGGGCAGGGGTAG...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp GATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCAGGAACTCTGCTCTTTaGGCCTCACCCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: DLLLVQSRAQTQGKSSRPRNSAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCT...GGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAACCAATGGGTGGAGCTaGCCCAGGCCTGCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGTNGWS*PRPARV
Trigger: GACTCTGGCAGGCCTGGGTCAGCTCCACCCATTGGT...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCAGTGTGAACCGCGCTaGAGACAGTCGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGQCEPR*RQSSGT
Trigger: AGTCCCACTCGACTGTCTTCAGCGCGGTTCACACTG...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGGCTGGGTCTCAGTGTaGACCGCGCTGAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPGWVSV*TALKTV
Trigger: GACTGTCTTCAGCGCGGTTCACACTGAGACCCAGCC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCGGTGGCATGGCCCTaGGAGTCTGGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTSVAWP*ESGDSS
Trigger: GGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGA...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTACACCCTGTGCCAAGCTaGGGTGGGAGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVHPVPS*GGRTWG
Trigger: GCCCCATGTCCTCCCACCTCAGCTTGGCACAGGGTG...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR TCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTACAGCAGGAGGCGGATaGGTTCCTGGCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPTAGGG*VPGCCT
Trigger: AGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTCTTCTTGTAGTTGGCTaGGCCCAGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: APPLGCGSAGSEKATAPALLVVG*AQRRGK
Trigger: CTTCCCTCTTCTCTGGGCTCAGCCAACTACAAGAAG...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAATGGGTCAGCAGGCTCTaGGAAGGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEWVSRL*EGNCSS
Trigger: GCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCA...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGTCTGCTGTAGCAGCTaGCCGACCTCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALVCCSS*PTSPGS
Trigger: GGAGCCTGGGGAGGTCGGTCAGCTGCTACAGCAGAC...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGTCTGCTGTAGCAGCTaGCCGACCTCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSVCCSS*PTSPGS
Trigger: GGAGCCTGGGGAGGTCGGTCAGCTGCTACAGCAGAC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGACCTGGTACAGCTCCTaGAAAGAGCCTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGTWYSS*KEPWAW
Trigger: CCAGGCCCAAGGCTCTTTTCAGGAGCTGTACCAGGT...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGCCCACGTCAAGGCCTCCCTGAAGAGCTGAAACAGCCTCTCAGCATCCGCCAGGCCTCCCTGAAGAGCTaGAACAGCCTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: SPRQGLPEELKQPLSIRQASLKS*NSLSAS
Trigger: GGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGC...CTGGCGGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCTGGCGGATGGCCTCTaGGCCCAGCCCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLELADGL*AQPRGQ
Trigger: CTGGCCACGGGGCTGGGCTCAGAGGCCATCCGCCAG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACCAGCTGTAGCCTGTTaGGGCTCCTGGGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGPAVAC*GSWGQS
Trigger: GCTCTGACCCCAGGAGCCTCAACAGGCTACAGCTGG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCAGCTGTAGCCTGTTaGGGCTCCTGGGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLPAVAC*GSWGQS
Trigger: GCTCTGACCCCAGGAGCCTCAACAGGCTACAGCTGG...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACCAGCTGTAGCCTGTTaGGGCTCCTGGGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTPAVAC*GSWGQS
Trigger: GCTCTGACCCCAGGAGCCTCAACAGGCTACAGCTGG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCAACCAGCTGTAGCCTGTTaGGGCTCCTGGGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PHFNLVQSAFPGLQCLDQPAVAC*GSWGQS
Trigger: GCTCTGACCCCAGGAGCCTCAACAGGCTACAGCTGG...TTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGGTGTGCCCATAGCTTaGCATCAGGGCATCGGAGCG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGGVPIA*HQGIGA
Trigger: CGCTCCGATGCCCTGATGTCAAGCTATGGGCACACC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGGTGTGCCCATAGCTTaGCATCAGGGCATCGGAGCG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPGVPIA*HQGIGA
Trigger: CGCTCCGATGCCCTGATGTCAAGCTATGGGCACACC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGCCCACGTCAAGGCCTCCCTGAAGAGCTGAAACAGCCTCTCAGCATCCGCCAGTGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: SPRQGLPEELKQPLSIRQCTGAG*GTPEQS
Trigger: GCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACA...CTGGCGGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGGAAAGGCAAGCATaGGGGCCCAGTAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCQERQA*GPSRGG
Trigger: TCCACCTCTACTGGGCCCTCATGCTTGCCTTTCCTG...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGCCCAGCCTTGGAGTTGTCCTaGTCCATCCCTAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSTWYTAPGAASCSWLSPALELS*SIPNSQ
Trigger: CTGGGAGTTAGGGATGGAGCAGGACAACTCCAAGGC...TGGGCTCAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp ATCCTGTCGCACCAGCTGCCCCTGTTCCTTGAGGTTAACATCACAGCCCTGGATAGAGGGGGCACCGGGTaGAACGGCTTCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ILSHQLPLFLEVNITALDRGGTG*NGFPGS
Trigger: AGAGCCAGGGAAGCCGTTGCACCCGGTGCCCCCTCT...ATCCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTCGGGCTGTGTTGGTaGCCTGCCCCCTCATTTCAC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCLGLCW*PAPSFH
Trigger: GTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGTATACGTTCACCCGCTaGCAGCACTCGGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: WSCRLLDLLLVQSRAQTQYTFTR*QHSGCV
Trigger: AACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATA...CTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCCACGTGGGATGGGGCTaGCATCCGGGTGGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSHVGWG*HPGGSE
Trigger: CTCACTCCCACCCGGATGGCAGCCCCATCCCACGTG...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGCGCGGAAGACAAGGTaGGGGCCCTGCAGCAACCCC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLARKTR*GPCSNP
Trigger: GGGGTTGCTGCAGGGCCCGCACCTTGTCTTCCGCGC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAGCCATGGCACCACGATaGCTCGGGTTCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPAMAPR*LGFALL
Trigger: CAGGAGAGCGAACCCGAGGCATCGTGGTGCCATGGC...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTGCCATGGCACCACGATaGCTCGGGTTCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VFAGCSAGSVGAAIHPPGAMAPR*LGFALL
Trigger: CAGGAGAGCGAACCCGAGGCATCGTGGTGCCATGGC...ACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTGLSGQ*RRRAWA
Trigger: GGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGTCACTCTCACCCTGTaGCAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCVTLTL*QAEVGG
Trigger: TCCTCCCACCTCAGCTTGGCACAGGGTGAGAGTGAC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCAGATGGCATCGCCCTaGTTGGACCTGGGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCQMASP*LDLGPL
Trigger: TAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGGGTCGCTGTCCAATaGCCCAGGGCTCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCRVAVQ*PRAQAR
Trigger: TCTGGCTTGAGCCCTGGGGCATTGGACAGCGACCCT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp GCACTTCAGGACATAGTTGACGGTGCGGTCGTTGATGGCTTCCTCGCTGGGAGCAGGGTCGCTGTCCAATaGCCCAGGGCTCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALQDIVDGAVVDGFLAGSRVAVQ*PRAQAR
Trigger: TCTGGCTTGAGCCCTGGGGCATTGGACAGCGACCCT...GCTCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAACTATGTCCTGAAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCTTCGGGCCTGGGGATaGTTCGCAGGTACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLLRAWG*FAGTAG
Trigger: TCCTGCTGTACCTGCGAAGCATCCCCAGGCCCGAAG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCTTCGGGCCTGGGGATaGTTCGCAGGTACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGLRAWG*FAGTAG
Trigger: TCCTGCTGTACCTGCGAAGCATCCCCAGGCCCGAAG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTTCGGGCCTGGGGATaGTTCGCAGGTACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCLRAWG*FAGTAG
Trigger: TCCTGCTGTACCTGCGAAGCATCCCCAGGCCCGAAG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCACTGTCAGTCCCAGTaGCTGTACTTCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFHCQSQ*LYFGPG
Trigger: CCCAGGCCCGAAGTACAGGCACTGGGACTGACAGTG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: CGSAGSEKATAPAAARKALPSAA*FPLAAP
Trigger: AGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAG...TGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGAGCCCAATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSTWYTAPGAASCSWLSPIRWLL*RVSWCS
Trigger: GCTGCACCAACTGACCCTGCAGAGCAACCAGCGAAT...TGGGCTCAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACAGAGGTCTTGGGCCAGGAGGCAGTCAGCAGGCTTAGGGAGGCCGGATCCAATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QQRSWARRQSAGLGRPDPIRWLL*RVSWCS
Trigger: GCTGCACCAACTGACCCTGCAGAGCAACCAGCGAAT...TGGATCCGGCCTCCCTAAGCCTGCTGACTGCCTCCTGGCCCAAGACCTCTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCCCGCCGTTGGGATGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTCCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: APPLGCGSAGSEKATAPAPVFAG*SAGSVG
Trigger: ACCAACTGACCCTGCAGAGCAACCAGCGAATACAGG...AGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACATCCCAACGGCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp AGCCCACGTCAAGGCCTCCCTGAAGAGCTGAAACAGCCTCTCAGCATCCGCCAGCACACTTCAATCTGGTaGAGTCCGCTTTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SPRQGLPEELKQPLSIRQHTSIW*SPLSRA
Trigger: GGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTG...CTGGCGGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAGGCCAGCCCACCTGCTaGAGCCACACTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEGQPTC*SHTSIW
Trigger: CCAGATTGAAGTGTGGCTGCAGCAGGTGGGCTGGCC...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTCCCCTTGCCTGACCTaGTCCTGGGCAACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCSPCLT*SWATWY
Trigger: GTACCAGGTTGCCCAGGAGCAGGTCAGGCAAGGGGA...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTCCCCTTGCCTGACCTaGTCCTGGGCAACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWSPCLT*SWATWY
Trigger: GTACCAGGTTGCCCAGGAGCAGGTCAGGCAAGGGGA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCTGCAGCTGCAGCTGCTaGAACACAACCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSCSCSC*NTTPGR
Trigger: ACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCA...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCTGCAGCTGCAGCTGCTaGAACACAACCCCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVCSCSC*NTTPGR
Trigger: ACGCCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCA...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCCTGGTCCAGTGCAGCTaGAGCTGCTGCAACACAACC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRALVQCS*SCCNTT
Trigger: GGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAG...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGGAGGCAAGTCAGGGTaGCTGGTCCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVGGKSG*LVQCSC
Trigger: GCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAGGAGGCAAGTCAGGGTaGCTGGTCCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPGGKSG*LVQCSC
Trigger: GCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCC...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCAGGCACAGTAGGGGATaGCTGGGGCAGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSRHSRG*LGQGTS
Trigger: GGAGGTGCCCTGCCCCAGGCATCCCCTACTGTGCCT...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGCAGCTTCTCCAGGTTaGCAAAGAGGTGGGCACGCT +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCAASPG*QRGGHA
Trigger: AGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGCAGCAGTGCGTACTTaGCCATGCGCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPAAVRT*PCAGWA
Trigger: AGCCCATCCAGCGCATGGGCAAGTACGCACTGCTGC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCATGCCGCAGCTGGAAGTaGACAAGGCTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPCRSWK*TRLWAS
Trigger: GGAGGCCCAGAGCCTTGTGCACTTCCAGCTGCGGCA...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTTGCCGCAGCTGGAAGTaGACAAGGCTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQACRSWK*TRLWAS
Trigger: GGAGGCCCAGAGCCTTGTGCACTTCCAGCTGCGGCA...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGTCCTGTCGCACCAGCTaGCCCTGTTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: WSCRLLDLLLVQSRAQTQSCRTS*PCSLRL
Trigger: TAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGA...CTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGAGGTGTCCCTGGCCTTaGGGCGGCGGAACCAGATCT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLRCPWP*GGGTRS
Trigger: AGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCT...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGGTGTCCCTGGCCTTaGGGCGGCGGAACCAGATCT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSRCPWP*GGGTRS
Trigger: AGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGTTGTTGTGGACGGCCTaGCTCCAAAGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGLLWTA*LQSRWE
Trigger: CTCCCACCTGCTTTGGAGGCAGGCCGTCCACAACAA...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGGGGCACCCTAGTCACTaGCTAGAGGCACATGGTCCC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWGHPSH*LEAHGP
Trigger: GGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAATCCCGAGTCCCCTGTaGCAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEIPSPL*QAEVGG
Trigger: TCCTCCCACCTCAGCTTGGCACAGGGGACTCGGGAT...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450733.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGCACTCGGGCTGTGTTaGTGCCCTGCCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCALGLC*CPAPSF
Trigger: AAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGC...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGCCAGGAAGGCCGCGTaGGTGAGCGAGGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQARKAA*VSEGEC
Trigger: GCACTCACCCTCGCTCACCCACGCGGCCTTCCTGGC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACGGCGTCGCAGTGCGTaGGTTGGGGCAGCGACCAAC +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQRRRSA*VGAATN
Trigger: GTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAATGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSECRRRA*AAGGAS
Trigger: ACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCA...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCAAATCTCCAGTCGGTaGCATGGCCCTGAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMQISSR*HGPESL
Trigger: CAGACTCTCAGGGCCATGCCACCGACTGGAGATTTG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCCCGGCTGGTGGTCTTaGAGGACCTGGGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGPGWWS*RTWVLN
Trigger: GTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACTGGGTGGCCCCGGCTaGTGGTCTTGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQLGGPG*WSWRTW
Trigger: CCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCTCCTCATCCTGGGTaGCCCCGGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYAPHPG*PRLVVL
Trigger: CAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGCTCCTCATCCTGGGTaGCCCCGGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERAPHPG*PRLVVL
Trigger: CAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATGTAGCTCCTCATCCTaGGTGGCCCCGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTCSSSS*VAPAGG
Trigger: ACCACCAGCCGGGGCCACCCAGGATGAGGAGCTACA...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACGCCCTGCTTGGACCTaGGTCCCCTACCAACCCTAC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTRPAWT*VPYQPY
Trigger: GTAGGGTTGGTAGGGGACCCAGGTCCAAGCAGGGCG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTGGCATCGCCCTGCTTaGACCTGGGTCCCCTACCAA +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWWHRPA*TWVPYQ
Trigger: TTGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAAGGGCTCAAGCCAGATaGCATCGCCCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMERAQAR*HRPAWT
Trigger: GGTCCAAGCAGGGCGATGCCATCTGGCTTGAGCCCT...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCTCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRASQQRS*ARRQSA
Trigger: TGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGA...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSSTARP*TSRVPG
Trigger: GCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCT...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSSTARP*TSRVPG
Trigger: GCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCAGCCAGGCTGGGCTGTaGGCACACAGAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFSQAGL*AHRSST
Trigger: AGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAAGCCAGGCTGGGCTGTaGGCACACAGAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMESQAGL*AHRSST
Trigger: AGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCT...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRARLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCCTGTACTTCGGGCCTaGGGATGCTTCGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCPVLRA*GCFAGT
Trigger: TGTACCTGCGAAGCATCCCCAGGCCCGAAGTACAGG...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCGCACGGACTTGTGGCGCCCAGTGCGCACCACAAACTCATCCTGTCGCACCAGGCTGCTTCTTGTAGTTaGCTGAGCCCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AHGLVAPSAHHKLILSHQAASCS*LSPEKR
Trigger: CCTCTTCTCTGGGCTCAGCCAACTACAAGAAGCAGC...CTGGTGCGACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp TCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGCCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SAGSVGAAIHPPGHIARQPTSST*YTAPGA
Trigger: AGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG...CTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSALLLAK*AAPPLG
Trigger: TCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGCTCAGGGTCACCTCTaGGACCTCTTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCAQGHL*DLLLQP
Trigger: TGGCTGAAGCAAGAGGTCCCAGAGGTGACCCTGAGC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTTGCCGTCCTGTAGTCTaGGCTCAGGGTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPCRPVV*AQGHLW
Trigger: CCAGAGGTGACCCTGAGCCCAGACTACAGGACGGCA...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCCTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVLCRVS*CSNPST
Trigger: GGTGGATGGATTGCTGCACCAACTGACCCTGCAGAG...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTCTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPLCRVS*CSNPST
Trigger: GGTGGATGGATTGCTGCACCAACTGACCCTGCAGAG...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCAGGGCCTGTATTCGCTaGTTGCTCTGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GQQALRRQLLQLQPGRHFRACIR*LLCRVS
Trigger: ACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCT...GAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGAGGGCCTGTATTCGCTaGTTGCTCTGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMRACIR*LLCRVS
Trigger: ACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCT...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGGGCCTCCAGTGTTTaGACCAACTCTAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCRASSV*TNSRAC
Trigger: ACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCG...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTGCCTGACCTGCTCCTaGGCAACCTGGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWCLTCS*ATWYSS
Trigger: GGAGCTGTACCAGGTTGCCCAGGAGCAGGTCAGGCA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAGAATTCAGTCAGCTaGGCTCGCAGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMENSVS*ARRARK
Trigger: CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGCATCCGCCAGCCGCTaGCACCGCTGGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQASASR*HRWAKA
Trigger: GGCTTTGGCCCAGCGGTGCCAGCGGCTGGCGGATGC...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGCAAGTCAGGGTGCCTaGTCCAGTGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPASQGA*SSAAAA
Trigger: AGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGGCACTCCTGGCGGATaGCCTCTGAGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSGTPGG*PLSPAP
Trigger: CGGGGCTGGGCTCAGAGGCCATCCGCCAGGAGTGCC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGAAGCCTCAAGCTTTTaGTCCAGGGCCAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCEASSF*SRASQV
Trigger: CACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGGTGCAGCGGGGACCTaGCTGACACACAGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLGAAGT*LTHRLA
Trigger: AGCTAGCCTGTGTGTCAGCCAGGTCCCCGCTGCACC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAACAGTAGGGGATGCCTaGGGCAGGGCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTTVGDA*GRAPPP
Trigger: TGGAGGAGGTGCCCTGCCCCAGGCATCCCCTACTGT...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCACAGTAGGGGATGCCTaGGGCAGGGCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSTVGDA*GRAPPP
Trigger: TGGAGGAGGTGCCCTGCCCCAGGCATCCCCTACTGT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCACAGTAGGGGATGCCTaGGGCAGGGCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALATVGDA*GRAPPP
Trigger: TGGAGGAGGTGCCCTGCCCCAGGCATCCCCTACTGT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGGGTCAGAGCTGCCTaGTGGAGGCACAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAGVRAA*WRHSRG
Trigger: TCCCCTACTGTGCCTCCACCAGGCAGCTCTGACCCC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGGGGTCAGAGCTGCCTaGTGGAGGCACAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSGVRAA*WRHSRG
Trigger: TCCCCTACTGTGCCTCCACCAGGCAGCTCTGACCCC...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAATAGGCCACTCGTGGTaGGTGCCGGGTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPIGHSW*VPGASL
Trigger: GAGGCTTGCACCCGGCACCCACCACGAGTGGCCTAT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGGCATAGGCCACTCGTaGTGGGTGCCGGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSGIGHS*WVPGAS
Trigger: GCTTGCACCCGGCACCCACCACGAGTGGCCTATGCC...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGGCATAGGCCACTCGTaGTGGGTGCCGGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVGIGHS*WVPGAS
Trigger: GCTTGCACCCGGCACCCACCACGAGTGGCCTATGCC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAGGCATAGGCCACTCGTaGTGGGTGCCGGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEGIGHS*WVPGAS
Trigger: GCTTGCACCCGGCACCCACCACGAGTGGCCTATGCC...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGAGGCCAGGTCCAGGTaGTCCCCCAGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSEARSR*SPSACC
Trigger: GCAGCAAGCACTGGGGGACCACCTGGACCTGGCCTC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAGAGGCCAGGTCCAGGTaGTCCCCCAGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATEARSR*SPSACC
Trigger: GCAGCAAGCACTGGGGGACCACCTGGACCTGGCCTC...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCACCCCTGTGGGCCCATaGCGAGGCTTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVTPVGP*RGLLKS
Trigger: GCTCTTCAGCAAGCCTCGCCATGGGCCCACAGGGGT...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATGTGTCAACCCCTGTaGGCCCATGGCGAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWMCQPL*AHGEAC
Trigger: GCAAGCCTCGCCATGGGCCCACAGGGGTTGACACAT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCATGTGTCAACCCCTGTaGGCCCATGGCGAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCMCQPL*AHGEAC
Trigger: GCAAGCCTCGCCATGGGCCCACAGGGGTTGACACAT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAGCACAAAGGTGTCCCTaGCCTTGCGGCGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEAQRCP*PCGGGT
Trigger: GGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGC...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGCACAAAGGTGTCCCTaGCCTTGCGGCGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLAQRCP*PCGGGT
Trigger: GGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGC...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCGCACCTCCTTGTTGTaGACGGCCTGCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCRTSLL*TACLQS
Trigger: GCTTTGGAGGCAGGCCGTCCACAACAAGGAGGTGCG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWTGLRQ*TPESEL
Trigger: AAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTT +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLTGLRQ*TPESEL
Trigger: AAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGT...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCGAGACCCAGAAGAGCTaGGTCTCTGTACAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVETQKS*VSVQVQ
Trigger: CTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTC...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCAGAGACCCAGAAGAGCTaGGTCTCTGTACAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CGSAGSEKATAPAAARKAETQKS*VSVQVQ
Trigger: CTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTC...TGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGCAGTCAAAGAGGGCTaGCCGCCCAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGAVKEG*PPSSAS
Trigger: TGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGC...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PLAPLGQSPREFSQLGSQRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...CTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 4 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGAACCCACAACTGGGATaGGAGCTGGGGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMNPQLG*ELGTGE
Trigger: TTCTCCTGTCCCCAGCTCCCATCCCAGTTGTGGGTT...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCTGCCTAGAGGCACATaGTCCCCCACCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGLPRGT*SPTSLQ
Trigger: CTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGGAGGAGCCTTCTTCATaGGCAGGTCTGGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWEEPSS*AGLAAR
Trigger: TCTGGCAGCCAGACCTGCTCATGAAGAAGGCTCCTC...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCAGGAGAAGACCCTaGGCCCCACAGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSTRRRP*APQCAQ
Trigger: CTGGGCACACTGTGGGGCTCAGGGTCTTCTCCTGGT...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTACCAATGGGTGGAGCTaGCCCAGGCCTGCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSATNGWS*PRPARV
Trigger: GACTCTGGCAGGCCTGGGTCAGCTCCACCCATTGGT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACATCGGTGGCATGGCCCTaGGAGTCTGGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATSVAWP*ESGDSS
Trigger: GGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGA...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGGTGGCATGGCCCTaGGAGTCTGGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSSVAWP*ESGDSS
Trigger: GGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGA...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACTGCTGCACTCAGACTaGAGCCAGGCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATLLHSD*SQAGLW
Trigger: CCACAGCCCAGCCTGGCTTCAGTCTGAGTGCAGCAG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTACTGCTGCACTCAGACTaGAGCCAGGCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALLLHSD*SQAGLW
Trigger: CCACAGCCCAGCCTGGCTTCAGTCTGAGTGCAGCAG...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCTGCTGCACTCAGACTaGAGCCAGGCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSALLHSD*SQAGLW
Trigger: CCACAGCCCAGCCTGGCTTCAGTCTGAGTGCAGCAG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGACAGCAGGAGGCGGATaGGTTCCTGGCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLTAGGG*VPGCCT
Trigger: AGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGT...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGGGTCAGCAGGCTCTaGGAAGGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVWVSRL*EGNCSS
Trigger: GCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCA...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATGGGTCAGCAGGCTCTaGGAAGGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGWVSRL*EGNCSS
Trigger: GCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCA...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCACCTGGTACAGCTCCTaGAAAGAGCCTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFTWYSS*KEPWAW
Trigger: CCAGGCCCAAGGCTCTTTTCAGGAGCTGTACCAGGT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCCTCCCTGAAGAGCTaGAACAGCCTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLASLKS*NSLSAS
Trigger: GGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGC...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGGCAGGCAGGTTCACTaGGACTCTGCCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTGRQVH*DSAPDS
Trigger: GGAATCTGGGGCAGAGTCTCAGTGAACCTGCCTGCC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCGGCAGGCAGGTTCACTaGGACTCTGCCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVGRQVH*DSAPDS
Trigger: GGAATCTGGGGCAGAGTCTCAGTGAACCTGCCTGCC...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGGTGTGCCCATAGCTTaGCATCAGGGCATCGGAGCG +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVGVPIA*HQGIGA
Trigger: CGCTCCGATGCCCTGATGTCAAGCTATGGGCACACC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGCTTGCTGCTTGTCCTTaGAGAAGGTGTGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLLAACP*RRCAHS
Trigger: GCTATGGGCACACCTTCTTCAAGGACAAGCAGCAAG...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCATGGCGAGGCTTGCTaGAGAGCAGCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWHGEAC*RAAAPQ
Trigger: TTGAGGAGCTGCTGCTCTTCAGCAAGCCTCGCCATG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGTGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLCTGAG*GTPEQS
Trigger: GCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACA...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR TCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACTGGAGCCACTGGCTaGTGGGCATTGGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWTGATG*WALGRD
Trigger: ATCTCGTCCCAATGCCCATCAGCCAGTGGCTCCAGT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAACCCGGGCTTCAGCCTaGGTAGGGTCAGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSETRASA*VGSETS
Trigger: GGAGGTCTCTGACCCTACTCAGGCTGAAGCCCGGGT...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp TGTGGGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTGACCGACCTCCTGTaGTTGAGGGCAATAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CGSAGSEKATAPAAARKALTDLL*LRAISL
Trigger: AAGGCTTATTGCCCTCAATCACAGGAGGTCGGTCAG...TGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393966.1
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCTATACGTTCACCCGCTaGCAGCACTCGGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAYTFTR*QHSGCV
Trigger: AACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATA...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCCAGGGCACAGGAACTaGAATTCAGGCCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCPGHRN*NSGLGR
Trigger: TCTTCCCAGGCCTGAATTGCAGTTCCTGTGCCCTGG...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEGLSGQ*RRRAWA
Trigger: GGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCC...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVGLSGQ*RRRAWA
Trigger: GGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTAGGAGCTTTCTACTGTaGCCCTCTGGGCATCCCCCG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQARSFLL*PSGHPP
Trigger: CGGGGGATGCCCAGAGGGGCACAGTAGAAAGCTCCT...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAAGGAGCTTTCTACTGTaGCCCTCTGGGCATCCCCCG +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPRSFLL*PSGHPP
Trigger: CGGGGGATGCCCAGAGGGGCACAGTAGAAAGCTCCT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAAGGAGCTTTCTACTGTaGCCCTCTGGGCATCCCCCG +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTRSFLL*PSGHPP
Trigger: CGGGGGATGCCCAGAGGGGCACAGTAGAAAGCTCCT...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCAGATGGCATCGCCCTaGTTGGACCTGGGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVQMASP*LDLGPL
Trigger: TAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCAGGGTCGCTGTCCAATaGCCCAGGGCTCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVRVAVQ*PRAQAR
Trigger: TCTGGCTTGAGCCCTGGGGCATTGGACAGCGACCCT...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTACACAGAAGCAGCACTaGCCGGCCTTGGACATCCCG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQATQKQH*PALDIP
Trigger: CGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGT...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGAGTCTAGCACCTGCTaGATCAGGACCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAESSTC*IRTSVC
Trigger: GCAGACAGAGGTCCTGATGCAGCAGGTGCTAGACTC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGCCCACGTCAAGGCCTCCCTGAAGAGCTGAAACAGCCTCTCAGCATCCGCCAGACCTCTGGGACCTCTTaGTTCAGCCATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPRQGLPEELKQPLSIRQTSGTS*FSHVSS
Trigger: GGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGT...CTGGCGGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGTCAGCCTTGTCCATTaGCGTCCTGTAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGVSLVH*RPVVWA
Trigger: AGCCCAGACTACAGGACGGCAATGGACAAGGCTGAC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAIRWLL*RVSWCS
Trigger: GCTGCACCAACTGACCCTGCAGAGCAACCAGCGAAT...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCACACTTCAATCTGGTaGAGTCCGCTTTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGHTSIW*SPLSRA
Trigger: GGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCATCCCCTTGCCTGACCTaGTCCTGGGCAACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPSPCLT*SWATWY
Trigger: GTACCAGGTTGCCCAGGAGCAGGTCAGGCAAGGGGA...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCAGCCAGTCAGCGGCTaGAGAAACTTCTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGQPVSG*RNFSPC
Trigger: GCAAGGGGAGAAGTTTCTGCAGCCGCTGACTGGCTG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAACAGCCAGTCAGCGGCTaGAGAAACTTCTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEQPVSG*RNFSPC
Trigger: GCAAGGGGAGAAGTTTCTGCAGCCGCTGACTGGCTG...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACAGTGCAGCTGCAGCTaGTGCAACACAACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLQCSCS*CNTTPG
Trigger: CCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCAGTGCAGCTGCAGCTaGTGCAACACAACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSQCSCS*CNTTPG
Trigger: CCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCAGTGCAGCTGCAGCTaGTGCAACACAACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAQCSCS*CNTTPG
Trigger: CCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCTGGTCCAGTGCAGCTaGAGCTGCTGCAACACAACC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFLVQCS*SCCNTT
Trigger: GGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCTGGTCCAGTGCAGCTaGAGCTGCTGCAACACAACC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWLVQCS*SCCNTT
Trigger: GGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAACTGGTCCAGTGCAGCTaGAGCTGCTGCAACACAACC +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMELVQCS*SCCNTT
Trigger: GGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAG...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGGAGGCAAGTCAGGGTaGCTGGTCCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYGGKSG*LVQCSC
Trigger: GCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCGCAGCTTCTCCAGGTTaGCAAAGAGGTGGGCACGCT +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFAASPG*QRGGHA
Trigger: AGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGC...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGTGGTCCCCCAGTGCTTaGTGCTTGTCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMWSPSA*CLSLKK
Trigger: CTTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCA...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGCAGTGCGTACTTaGCCATGCGCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAAAVRT*PCAGWA
Trigger: AGCCCATCCAGCGCATGGGCAAGTACGCACTGCTGC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGCCCGTGCCAGCTCCTaGAGCAGCAGTGCGTACTTG +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVARASS*SSSAYL
Trigger: CAAGTACGCACTGCTGCTGCAGGAGCTGGCACGGGC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGCCCGTGCCAGCTCCTaGAGCAGCAGTGCGTACTTG +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERARASS*SSSAYL
Trigger: CAAGTACGCACTGCTGCTGCAGGAGCTGGCACGGGC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGCCCGTGCCAGCTCCTaGAGCAGCAGTGCGTACTTG +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLARASS*SSSAYL
Trigger: CAAGTACGCACTGCTGCTGCAGGAGCTGGCACGGGC...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTTGCCGCAGCTGGAAGTaGACAAGGCTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSACRSWK*TRLWAS
Trigger: GGAGGCCCAGAGCCTTGTGCACTTCCAGCTGCGGCA...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGTCCTGTCGCACCAGCTaGCCCTGTTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGSCRTS*PCSLRL
Trigger: TAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGA...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGGTGTCCCTGGCCTTaGGGCGGCGGAACCAGATCT +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSRCPWP*GGGTRS
Trigger: AGATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCT...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGTTGTTGTGGACGGCCTaGCTCCAAAGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLLLWTA*LQSRWE
Trigger: CTCCCACCTGCTTTGGAGGCAGGCCGTCCACAACAA...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGCTGGCCGCCCAGCTCTaGCTCAGCCTCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQLAAQL*LSLQCC
Trigger: GCAGCACTGGAGGCTGAGGCAGAGCTGGGCGGCCAG...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp GGCAGTAAGGCAGGCCTCCTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GSKAGLLLAKWAAPPLGCGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...ACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGCCTTACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp AAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCATACCGAAATGACTTGGGTCTaGCTTGGACCACCTATCCAG +
Preference number: 4 (lower is better)
Translates to: KQHCPALDIPSPWQGGHTEMTWV*LGPPIQ
Trigger: CTGGATAGGTGGTCCAAGGCAGACCCAAGTCATTTC...GGTATGGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCCAGGGCACAGGAACTaGAATTCAGGCCCGCGGCGT +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSAPGHRN*NSGPRR
Trigger: ACGCCGCGGGCCTGAATTGCAGTTCCTGTGCCCTGG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427155.6
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGCAGGGCTGGGCCCTaGTTTCTCCACTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLGRAGP*FLHSTE
Trigger: CTCTGTGGAGTGGAGAAACCAGGGCCCAGCCCTGCC...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGGCAGGGCTGGGCCCTaGTTTCTCCACTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVGRAGP*FLHSTE
Trigger: CTCTGTGGAGTGGAGAAACCAGGGCCCAGCCCTGCC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGCACTCGGGCTGTGTTaGTGCCCTGCCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLALGLC*CPAPSF
Trigger: AAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCAGGCTGGTGCTGAGGTaGGGTTCTGGAGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLRLVLR*GSGARA
Trigger: GGCTCTGGCTCCAGAACCCCACCTCAGCACCAGCCT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTCGCATGATCCCACGTaGGATGGGGCTGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLSHDPT*DGAAIR
Trigger: CCGGATGGCAGCCCCATCCCACGTGGGATCATGCGA...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTTGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVCRRRA*AAGGAS
Trigger: ACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCA...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCGAGTGGGACTCAGTaGGCAATGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTSSGTQ*AMQAKG
Trigger: GCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGA...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACCCGGCTGGTGGTCTTaGAGGACCTGGGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGPGWWS*RTWVLN
Trigger: GTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGGTGGCCCCGGCTGGTaGTCTTGGAGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSGGPGW*SWRTWV
Trigger: GACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGCTGGGTGGCCCCGGCTaGTGGTCTTGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQLGGPG*WSWRTW
Trigger: CCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAG...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGCAGCTGGGGGTAACTaGAATTTCCTGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGAAGGN*NFLDKG
Trigger: CCCCTTGTCCAGGAAATTCCAGTTACCCCCAGCTGC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTACCAACCCTACCCCTaGGGTGTCACTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGYQPYP*GVTLTL
Trigger: CAGGGTGAGAGTGACACCCCAGGGGTAGGGTTGGTA...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACGCCCTGCTTGGACCTaGGTCCCCTACCAACCCTAC +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLRPAWT*VPYQPY
Trigger: GTAGGGTTGGTAGGGGACCCAGGTCCAAGCAGGGCG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATGGCATCGCCCTGCTTaGACCTGGGTCCCCTACCAA +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGWHRPA*TWVPYQ
Trigger: TTGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCA...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTAGGGCTCAAGCCAGATaGCATCGCCCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQARAQAR*HRPAWT
Trigger: GGTCCAAGCAGGGCGATGCCATCTGGCTTGAGCCCT...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAAGGGCTCAAGCCAGATaGCATCGCCCTGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTRAQAR*HRPAWT
Trigger: GGTCCAAGCAGGGCGATGCCATCTGGCTTGAGCCCT...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGTCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLSQQRS*ARRQSA
Trigger: TGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGA...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGAGTCCCTGGCAAGGTaGCCATACCACTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAESLAR*PYHWPA
Trigger: TGCTGGCCAGTGGTATGGCCACCTTGCCAGGGACTC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGCCAGGCTGGGCTGTaGGCACACAGAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSSQAGL*AHRSST
Trigger: AGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFRLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCCTGTACTTCGGGCCTaGGGATGCTTCGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLPVLRA*GCFAGT
Trigger: TGTACCTGCGAAGCATCCCCAGGCCCGAAGTACAGG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLPTSST*YTAPGA
Trigger: AGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERLSMAP*SRAQAA
Trigger: GGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAACTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSELSMAP*SRAQAA
Trigger: GGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAG...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATLSMAP*SRAQAA
Trigger: GGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTTTCGATGGCCCCCTaGAGCAGGGCACAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTALSMAP*SRAQAA
Trigger: GGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAAG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCCCTTCACACTTTCGATaGCCCCCTGGAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSPSHFR*PPGAGH
Trigger: GTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGG...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACCAGGCTCCATGGGCTaGGGCACAGCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGPGSMG*GTAFTL
Trigger: AAGTGTGAAGGCTGTGCCCCAGCCCATGGAGCCTGG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCCCAGGCTCCATGGGCTaGGGCACAGCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSPGSMG*GTAFTL
Trigger: AAGTGTGAAGGCTGTGCCCCAGCCCATGGAGCCTGG...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCCAGGCTCCATGGGCTaGGGCACAGCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: VFAGCSAGSVGAAIHPPGPGSMG*GTAFTL
Trigger: AAGTGTGAAGGCTGTGCCCCAGCCCATGGAGCCTGG...ACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTTGCCGTCCTGTAGTCTaGGCTCAGGGTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQACRPVV*AQGHLW
Trigger: CCAGAGGTGACCCTGAGCCCAGACTACAGGACGGCA...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCGGGCCTCCAGTGTTTaGACCAACTCTAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPRASSV*TNSRAC
Trigger: ACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAACGGGCCTCCAGTGTTTaGACCAACTCTAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMERASSV*TNSRAC
Trigger: ACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCG...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAAAAGAGCCTTGGGCCTaGAGCAGCATGTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEKEPWA*SSMSSE
Trigger: CTCGCTGGACATGCTGCTCCAGGCCCAAGGCTCTTT...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTAAAGAGCCTTGGGCCTaGAGCAGCATGTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPKEPWA*SSMSSE
Trigger: CTCGCTGGACATGCTGCTCCAGGCCCAAGGCTCTTT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCTGCCTGACCTGCTCCTaGGCAACCTGGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSCLTCS*ATWYSS
Trigger: GGAGCTGTACCAGGTTGCCCAGGAGCAGGTCAGGCA...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGAGAATTCAGTCAGCTaGGCTCGCAGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCENSVS*ARRARK
Trigger: CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCGAGAATTCAGTCAGCTaGGCTCGCAGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGENSVS*ARRARK
Trigger: CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTC...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGCATCCGCCAGCCGCTaGCACCGCTGGGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEASASR*HRWAKA
Trigger: GGCTTTGGCCCAGCGGTGCCAGCGGCTGGCGGATGC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGAAGCCTCAAGCTTTTaGTCCAGGGCCAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGEASSF*SRASQV
Trigger: CACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAAGCCTCAAGCTTTTaGTCCAGGGCCAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLEASSF*SRASQV
Trigger: CACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTC...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGGTGCAGCGGGGACCTaGCTGACACACAGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERGAAGT*LTHRLA
Trigger: AGCTAGCCTGTGTGTCAGCCAGGTCCCCGCTGCACC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGGTGCAGCGGGGACCTaGCTGACACACAGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSGAAGT*LTHRLA
Trigger: AGCTAGCCTGTGTGTCAGCCAGGTCCCCGCTGCACC...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGATAGTGGCCGCATGGTaGCAGTGGCAGGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLIVAAW*QWQAGS
Trigger: TGAACCTGCCTGCCACTGCCACCATGCGGCCACTAT...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCACCTCCTCCAGCCTCTaGTCTGCGGCAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSTSSSL*SAAGSN
Trigger: ATTGCTGCCTGCCGCAGACCAGAGGCTGGAGGAGGT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAGTCAGAGCTGCCTGGTaGAGGCACAGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPVRAAW*RHSRGC
Trigger: GCATCCCCTACTGTGCCTCCACCAGGCAGCTCTGAC...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGGGGTCAGAGCTGCCTaGTGGAGGCACAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVGVRAA*WRHSRG
Trigger: TCCCCTACTGTGCCTCCACCAGGCAGCTCTGACCCC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACATACTCCCGCTCCGTaGCCACCATCTCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTHTPAP*PPSLPA
Trigger: TGCTGGCAGAGATGGTGGCCACGGAGCGGGAGTATG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAATCACGCAGGAAGAAGTaGCAGTGGAAGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMESRRKK*QWKSRS
Trigger: GCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGA...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTTCACGCAGGAAGAAGTaGCAGTGGAAGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPSRRKK*QWKSRS
Trigger: GCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGA...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAATAGGCCACTCGTGGTaGGTGCCGGGTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEIGHSW*VPGASL
Trigger: GAGGCTTGCACCCGGCACCCACCACGAGTGGCCTAT...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCATAGGCCACTCGTGGTaGGTGCCGGGTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSIGHSW*VPGASL
Trigger: GAGGCTTGCACCCGGCACCCACCACGAGTGGCCTAT...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGATAGGCCACTCGTGGTaGGTGCCGGGTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSIGHSW*VPGASL
Trigger: GAGGCTTGCACCCGGCACCCACCACGAGTGGCCTAT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCAAGTGCACAAGGCTCTaGGCCTCCCGCAGCGCACTG +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSKCTRL*ASRSAL
Trigger: CAGTGCGCTGCGGGAGGCCCAGAGCCTTGTGCACTT...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTAAGTGCACAAGGCTCTaGGCCTCCCGCAGCGCACTG +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSAKCTRL*ASRSAL
Trigger: CAGTGCGCTGCGGGAGGCCCAGAGCCTTGTGCACTT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGAAGTGCACAAGGCTCTaGGCCTCCCGCAGCGCACTG +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERKCTRL*ASRSAL
Trigger: CAGTGCGCTGCGGGAGGCCCAGAGCCTTGTGCACTT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTTTCCGTGCCGCAGCTaGAAGTGCACAAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWFPCRS*KCTRLW
Trigger: CCAGAGCCTTGTGCACTTCCAGCTGCGGCACGGAAA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTACCCCTGTGGGCCCATaGCGAGGCTTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTATPVGP*RGLLKS
Trigger: GCTCTTCAGCAAGCCTCGCCATGGGCCCACAGGGGT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAACCCCTGTGGGCCCATaGCGAGGCTTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATTPVGP*RGLLKS
Trigger: GCTCTTCAGCAAGCCTCGCCATGGGCCCACAGGGGT...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCTGTTCCCCACACCCATaGACACCATCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRACSPHP*TPSQPC
Trigger: GCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACA...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCAGTGCTGCTTCCTCTaGGAAGCTGGGATACAGGGG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWQCCFL*EAGIQG
Trigger: CCCCTGTATCCCAGCTTCCCAGAGGAAGCAGCACTG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCAGTCAAAGAGGGCTaGCCGCCCAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALAVKEG*PPSSAS
Trigger: TGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGC...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGCAGTCAAAGAGGGCTaGCCGCCCAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERAVKEG*PPSSAS
Trigger: TGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGCTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKLADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAAGCCACTGGAGCCACTaGCTGATGGGCATTGGGACG +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGSHWSH*LMGIGT
Trigger: CGTCCCAATGCCCATCAGCCAGTGGCTCCAGTGGCT...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp AGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SCRLLDLLLVQSRAQTQGRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...ACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCTGCCTAGAGGCACATaGTCCCCCACCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVLPRGT*SPTSLQ
Trigger: CTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCAGCACTGCCCGGCCTTaGACATCCCGAGTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLSTARP*TSRVPC
Trigger: ACAGGGGACTCGGGATGTCCAAGGCCGGGCAGTGCT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450733.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAAGACTCAAAGAGGGCTaGCCGCCCAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGRLKEG*PPSSAS
Trigger: TGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGAGTCT...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569875.5
CDS-3UTR TCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCAGTGTGAACCGCGCTaGAGACAGTCGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAQCEPR*RQSSGT
Trigger: AGTCCCACTCGACTGTCTTCAGCGCGGTTCACACTG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTCAGTGTGAACCGCGCTaGAGACAGTCGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAQCEPR*RQSSGT
Trigger: AGTCCCACTCGACTGTCTTCAGCGCGGTTCACACTG...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGGCTGGGTCTCAGTGTaGACCGCGCTGAAGACAGTC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERGWVSV*TALKTV
Trigger: GACTGTCTTCAGCGCGGTTCACACTGAGACCCAGCC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTATCGGTGGCATGGCCCTaGGAGTCTGGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLSVAWP*ESGDSS
Trigger: GGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGA...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCACACCCTGTGCCAAGCTaGGGTGGGAGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSHPVPS*GGRTWG
Trigger: GCCCCATGTCCTCCCACCTCAGCTTGGCACAGGGTG...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR TCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCACAGCAGGAGGCGGATaGGTTCCTGGCTGCTGCACT +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSTAGGG*VPGCCT
Trigger: AGTGCAGCAGCCAGGAACTCATCCGCCTCCTGCTGT...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCTTCTTGTAGTTGGCTaGGCCCAGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCLLVVG*AQRRGK
Trigger: CTTCCCTCTTCTCTGGGCTCAGCCAACTACAAGAAG...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCTGGGTCAGCAGGCTCTaGGAAGGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVWVSRL*EGNCSS
Trigger: GCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCA...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTACCTGGTACAGCTCCTaGAAAGAGCCTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSPLSRASSVWTNSRACITWYSS*KEPWAW
Trigger: CCAGGCCCAAGGCTCTTTTCAGGAGCTGTACCAGGT...AATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAGCCTCCCTGAAGAGCTaGAACAGCCTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPASLKS*NSLSAS
Trigger: GGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGC...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCGCCTCCCTGAAGAGCTaGAACAGCCTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVASLKS*NSLSAS
Trigger: GGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGC...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCACGTCAAGGCCTCCCTaGAGAGCTGAAACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCTSRPP*RAETAS
Trigger: AGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCATGGCGAGGCTTGCTaGAGAGCAGCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVHGEAC*RAAAPQ
Trigger: TTGAGGAGCTGCTGCTCTTCAGCAAGCCTCGCCATG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTCTGAG*GTPEQS
Trigger: GCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACA...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGTGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLCTGAG*GTPEQS
Trigger: GCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACA...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR TCA 90 bp GCAGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTTGTGGCGCCCAGTGCTTGGGACGAGATCTCTaGGTCCTCAGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AAAPQKGRCGARTCGAQCLGRDL*VLSSQR
Trigger: TCTTTGACTGCTGAGGACTCAGAGATCTCGTCCCAA...GCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAACTGGAGCCACTGGCTaGTGGGCATTGGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPTGATG*WALGRD
Trigger: ATCTCGTCCCAATGCCCATCAGCCAGTGGCTCCAGT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAACTGGAGCCACTGGCTaGTGGGCATTGGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTTGATG*WALGRD
Trigger: ATCTCGTCCCAATGCCCATCAGCCAGTGGCTCCAGT...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCACTGGAGCCACTGGCTaGTGGGCATTGGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVTGATG*WALGRD
Trigger: ATCTCGTCCCAATGCCCATCAGCCAGTGGCTCCAGT...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGAGCTTGGGAAGGGAAATaGCTTGGGTCTGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGAWEGK*LGSALD
Trigger: GTCCAAGGCAGACCCAAGTCATTTCCCTTCCCAAGC...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGCCTTGGAGTTGTCCTaGTCCATCCCTAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPALELS*SIPNSQ
Trigger: CTGGGAGTTAGGGATGGAGCAGGACAACTCCAAGGC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGGGAAGGTCAGCTCTaGGACCAGGAGAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVWEGQL*DQEKTL
Trigger: CAGGGTCTTCTCCTGGTCGCAGAGCTGACCTTCCCA...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGCTGTGTTGGTGCCCTaGCCCCTCATTTCACCCGCA +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVAVLVP*PLISPA
Trigger: TGCGGGTGAAATGAGGGGGCAGGGCACCAACACAGC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCTCGGGCTGTGTTGGTaGCCTGCCCCCTCATTTCAC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSLGLCW*PAPSFH
Trigger: GTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCAAGCGCTCCAGGAACTCTaGTCTTTGAGCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: PHFNLVQSAFPGLQCLDQALQEL*SLSLTL
Trigger: GAGGGTGAGGCTCAAAGAGCAGAGTTCCTGGAGCGC...TTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTCCACAAAGTCCGGTaGAGGAGGCTGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTALHKVR*RRLVLR
Trigger: CCTCAGCACCAGCCTCCTGCACCGGACTTTGTGGAG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGATCCTCTACCCCTTTaGCATCCCTGGCACCCCCTT +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTDPLPL*HPWHPL
Trigger: AAGGGGGTGCCAGGGATGGCAAAGGGGTAGAGGATC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGCCATGGCACCACGATaGCTCGGGTTCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQAMAPR*LGFALL
Trigger: CAGGAGAGCGAACCCGAGGCATCGTGGTGCCATGGC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCCTGGGTCCTTAACGTaGATCTGGGAAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFPGSLT*IWEAGS
Trigger: GGAACCTGCTTCCCAGATGCACGTTAAGGACCCAGG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCTCCTGGACAAGGGGCTaGCCTGTAGCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSSWTRG*PVAPHP
Trigger: AGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGA...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTCCTGGACAAGGGGCTaGCCTGTAGCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALASWTRG*PVAPHP
Trigger: AGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGA...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACAGGAGCTTTCTACTGTaGCCCTCTGGGCATCCCCCG +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYRSFLL*PSGHPP
Trigger: CGGGGGATGCCCAGAGGGGCACAGTAGAAAGCTCCT...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGGTCACTCTCACCCTGTaGCAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSRASSVWTNSRACIRWLVTLTL*QAEVGG
Trigger: TCCTCCCACCTCAGCTTGGCACAGGGTGAGAGTGAC...CAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTGTCACTCTCACCCTGTaGCAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CSPLSRASSVWTNSRACIVTLTL*QAEVGG
Trigger: TCCTCCCACCTCAGCTTGGCACAGGGTGAGAGTGAC...AATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTACAGATGGCATCGCCCTaGTTGGACCTGGGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVQMASP*LDLGPL
Trigger: TAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTG...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGGGTCGCTGTCCAATaGCCCAGGGCTCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSRVAVQ*PRAQAR
Trigger: TCTGGCTTGAGCCCTGGGGCATTGGACAGCGACCCT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAAGGGTCGCTGTCCAATaGCCCAGGGCTCAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLRVAVQ*PRAQAR
Trigger: TCTGGCTTGAGCCCTGGGGCATTGGACAGCGACCCT...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTACACAGAAGCAGCACTaGCCGGCCTTGGACATCCCG +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSATQKQH*PALDIP
Trigger: CGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAACACAGAAGCAGCACTaGCCGGCCTTGGACATCCCG +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALTQKQH*PALDIP
Trigger: CGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGT...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCTTCGGGCCTGGGGATaGTTCGCAGGTACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSALRAWG*FAGTAG
Trigger: TCCTGCTGTACCTGCGAAGCATCCCCAGGCCCGAAG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCCTTCGGGCCTGGGGATaGTTCGCAGGTACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSLRAWG*FAGTAG
Trigger: TCCTGCTGTACCTGCGAAGCATCCCCAGGCCCGAAG...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACACTGTCAGTCCCAGTaGCTGTACTTCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLHCQSQ*LYFGPG
Trigger: CCCAGGCCCGAAGTACAGGCACTGGGACTGACAGTG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLLPSAA*FPLAAP
Trigger: AGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCACCTCTGGGACCTCTTaGTTCAGCCATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCTSGTS*FSHVSS
Trigger: GGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGGTCAGCCTTGTCCATTaGCGTCCTGTAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWVSLVH*RPVVWA
Trigger: AGCCCAGACTACAGGACGGCAATGGACAAGGCTGAC...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACACACTTCAATCTGGTaGAGTCCGCTTTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGHTSIW*SPLSRA
Trigger: GGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACTTCAATCTGGTaGAGTCCGCTTTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPHTSIW*SPLSRA
Trigger: GGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTGGCCAGCCCACCTGCTaGAGCCACACTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAGQPTC*SHTSIW
Trigger: CCAGATTGAAGTGTGGCTGCAGCAGGTGGGCTGGCC...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGGCCAGCCCACCTGCTaGAGCCACACTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSGQPTC*SHTSIW
Trigger: CCAGATTGAAGTGTGGCTGCAGCAGGTGGGCTGGCC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCCCAGCCTCCTCCAGTaGTGGCCAGCCCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGPSLLQ*WPAHLL
Trigger: CAGCAGGTGGGCTGGCCAGCACTGGAGGAGGCTGGG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCCAGCCAGTCAGCGGCTaGAGAAACTTCTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSQPVSG*RNFSPC
Trigger: GCAAGGGGAGAAGTTTCTGCAGCCGCTGACTGGCTG...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATTCTGCCAACACTCGCTaGCCCTCCTCAGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYSANTR*PSSAHV
Trigger: GACGTGGGCTGAGGAGGGGCAGCGAGTGTTGGCAGA...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACAGTGCAGCTGCAGCTaGTGCAACACAACCCCCGGG +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQQCSCS*CNTTPG
Trigger: CCCGGGGGTTGTGTTGCAGCAGCTGCAGCTGCACTG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCTGGTCCAGTGCAGCTaGAGCTGCTGCAACACAACC +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALALVQCS*SCCNTT
Trigger: GGTTGTGTTGCAGCAGCTGCAGCTGCACTGGACCAG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGGAGGCAAGTCAGGGTaGCTGGTCCAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLGGKSG*LVQCSC
Trigger: GCAGCTGCACTGGACCAGGCACCCTGACTTGCCTCC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGGTTCACTGAGACTCTaGCCCAGATTCCGATCGAAG +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAGSLRL*PRFRSK
Trigger: CTTCGATCGGAATCTGGGGCAGAGTCTCAGTGAACC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCAAGCAGCTTCTCCAGGTTaGCAAAGAGGTGGGCACGCT +
Preference number: 4 (lower is better)
Translates to: PHFNLVQSAFPGLQCLDQAASPG*QRGGHA
Trigger: AGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGC...TTGGTCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGTGGTGGGTGCCGGGTaGAAGCCTCCAGCTCACGCA +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSVVGAG*KPPAHA
Trigger: TGCGTGAGCTGGAGGCTTGCACCCGGCACCCACCAC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGCCACTCGTGGTGGGTaGCGGGTGCAAGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEATRGG*RVQASS
Trigger: GCTGGAGGCTTGCACCCGGCACCCACCACGAGTGGC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTAGCGAGGCTTATTCTTaGTGTAGAGCGCGTACATCC +
Preference number: 4 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPSEAYS*CRARTS
Trigger: GGATGTACGCGCTCTACAGCAAGAATAAGCCTCGCT...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCTCCCCCAGTGCTTGCTaGTTGTCCTTGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCSPSAC*LSLKKV
Trigger: CACCTTCTTCAAGGACAAGCAGCAAGCACTGGGGGA...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCGTGCGTACTTGCCCATaGGCTGGATGGGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFVRTCP*AGWALA
Trigger: TGCTAAAGCCCATCCAGCGCATGGGCAAGTACGCAC...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGCAGCAGTGCGTACTTaGCCATGCGCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVAAVRT*PCAGWA
Trigger: AGCCCATCCAGCGCATGGGCAAGTACGCACTGCTGC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGCAGCAGTGCGTACTTaGCCATGCGCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERAAVRT*PCAGWA
Trigger: AGCCCATCCAGCGCATGGGCAAGTACGCACTGCTGC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCCTCAAAAAGGAAGATaGGGCGCACGGACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFPQKGR*GARTCG
Trigger: GCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGATCTCGAAGCGCAGGTTaGTGTTCCCACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGSRSAG*CSHSTQ
Trigger: CTGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGA...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTCAGCTGTCCAGGCCTaGTTGATAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALASAVQA*LIARLE
Trigger: CTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGA...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLGCWIY*SSSPGL
Trigger: GAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 4 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 4 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGGGCACCCTAGTCACTaGCTAGAGGCACATGGTCCC +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLGHPSH*LEAHGP
Trigger: GGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGGGCACCCTAGTCACTaGCTAGAGGCACATGGTCCC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSGHPSH*LEAHGP
Trigger: GGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCGAGCTACAGGTTGCATaGCCCAGGATGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCELQVA*PRMAKV
Trigger: TACCTTTGCCATCCTGGGCCATGCAACCTGTAGCTC...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGGAGCTACAGGTTGCATaGCCCAGGATGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: CRLLDLLLVQSRAQTQGKELQVA*PRMAKV
Trigger: TACCTTTGCCATCCTGGGCCATGCAACCTGTAGCTC...CTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGCTGACCTGGCACCCTaGGCACAGCAGGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVADLAP*AQQADS
Trigger: TGAATCTGCCTGCTGTGCCCAGGGTGCCAGGTCAGC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACTTCATGAGCAGGTCTaGCTGCCAGAGGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGLHEQV*LPEGSL
Trigger: AAGGCTCCCCTCTGGCAGCCAGACCTGCTCATGAAG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGGTTGCCGTGAGGACTaGGGAAGACTCCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPGCRED*GRLPVL
Trigger: TAACACAGGGAGTCTTCCCCAGTCCTCACGGCAACC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGCTGAGGTGGGGTTCTaGAGCCAGAGCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEAEVGF*SQSPQP
Trigger: GGGCTGGGGGCTCTGGCTCCAGAACCCCACCTCAGC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCAGTAAGGCAGGCCTCCTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTACTGCAATTCAGGCCTaGGAAGAGGGAATAACGTTA +
Preference number: 4 (lower is better)
Translates to: GSKAGLLLAKWAAPPLGCTAIQA*EEGITL
Trigger: TAACGTTATTCCCTCTTCCCAGGCCTGAATTGCAGT...ACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGCCTTACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTATCGAGTGGGACTCAGTaGGCAATGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVSSGTQ*AMQAKG
Trigger: GCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGA...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTATCGAGTGGGACTCAGTaGGCAATGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALSSGTQ*AMQAKG
Trigger: GCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGA...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCTCGAGTGGGACTCAGTaGGCAATGCAGGCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVSSGTQ*AMQAKG
Trigger: GCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGA...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGATGGCCCTGAGAGTCTaGGGACTCATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: FRWPPGAGHKLPGSSVVEMALRV*GLIPIL
Trigger: GAGAATGGGGATGAGTCCCCAGACTCTCAGGGCCAT...CTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCTCCTTAACGTGCATCTaGGAAGCAGGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DLLLVQSRAQTQGKSSRPSLTCI*EAGSSS
Trigger: AGAGGAGGAACCTGCTTCCCAGATGCACGTTAAGGA...GGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCCCGGCTGGTGGTCTTaGAGGACCTGGGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAPGWWS*RTWVLN
Trigger: GTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCCCGGCTGGTGGTCTTaGAGGACCTGGGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERPGWWS*RTWVLN
Trigger: GTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCCCGGCTGGTGGTCTTaGAGGACCTGGGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYPGWWS*RTWVLN
Trigger: GTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGG...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGCAGCTGGGGGTAACTaGAATTTCCTGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGAAGGN*NFLDKG
Trigger: CCCCTTGTCCAGGAAATTCCAGTTACCCCCAGCTGC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGAGCAGCTGGGGGTAACTaGAATTTCCTGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGAAGGN*NFLDKG
Trigger: CCCCTTGTCCAGGAAATTCCAGTTACCCCCAGCTGC...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTCTACTGTGCCCCTCTaGGCATCCCCCGACTCATCT +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVSTVPL*ASPDSS
Trigger: AGATGAGTCGGGGGATGCCCAGAGGGGCACAGTAGA...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTTCTACTGTGCCCCTCTaGGCATCCCCCGACTCATCT +
Preference number: 4 (lower is better)
Translates to: VFAGCSAGSVGAAIHPPGSTVPL*ASPDSS
Trigger: AGATGAGTCGGGGGATGCCCAGAGGGGCACAGTAGA...ACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCCCTGCTTGGACCTaGGTCCCCTACCAACCCTAC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLRPAWT*VPYQPY
Trigger: GTAGGGTTGGTAGGGGACCCAGGTCCAAGCAGGGCG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGTGGCATCGCCCTGCTTaGACCTGGGTCCCCTACCAA +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERWHRPA*TWVPYQ
Trigger: TTGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCA...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTTCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQASQQRS*ARRQSA
Trigger: TGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGA...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAAGGTGGCCATACCACTaGCCAGCAGCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGRWPYH*PAAPNR
Trigger: TCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCT...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGAGTCCCTGGCAAGGTaGCCATACCACTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVESLAR*PYHWPA
Trigger: TGCTGGCCAGTGGTATGGCCACCTTGCCAGGGACTC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGTCCCTGGCAAGGTaGCCATACCACTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLESLAR*PYHWPA
Trigger: TGCTGGCCAGTGGTATGGCCACCTTGCCAGGGACTC...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAGACATCCCGAGTCCCTaGCAAGGTGGCCATACCACT +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPDIPSP*QGGHTT
Trigger: AGTGGTATGGCCACCTTGCCAGGGACTCGGGATGTC...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAAGCCAGGCTGGGCTGTaGGCACACAGAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATSQAGL*AHRSST
Trigger: AGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCT...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSRLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALARLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCCTTCACACTTTCGATaGCCCCCTGGAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERPSHFR*PPGAGH
Trigger: GTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAACCTTCACACTTTCGATaGCCCCCTGGAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEPSHFR*PPGAGH
Trigger: GTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGG...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGCTCAGGGTCACCTCTaGGACCTCTTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTAQGHL*DLLLQP
Trigger: TGGCTGAAGCAAGAGGTCCCAGAGGTGACCCTGAGC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCGCTCAGGGTCACCTCTaGGACCTCTTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAAQGHL*DLLLQP
Trigger: TGGCTGAAGCAAGAGGTCCCAGAGGTGACCCTGAGC...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAGCTCAGGGTCACCTCTaGGACCTCTTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPAQGHL*DLLLQP
Trigger: TGGCTGAAGCAAGAGGTCCCAGAGGTGACCCTGAGC...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTATGCCGTCCTGTAGTCTaGGCTCAGGGTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVCRPVV*AQGHLW
Trigger: CCAGAGGTGACCCTGAGCCCAGACTACAGGACGGCA...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGLCRVS*CSNPST
Trigger: GGTGGATGGATTGCTGCACCAACTGACCCTGCAGAG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCLCRVS*CSNPST
Trigger: GGTGGATGGATTGCTGCACCAACTGACCCTGCAGAG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGCCACACTTCAATCTaGTGCAGTCCGCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCSHTSI*CSPLSR
Trigger: CCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCAAAGAGCCTTGGGCCTaGAGCAGCATGTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAKEPWA*SSMSSE
Trigger: CTCGCTGGACATGCTGCTCCAGGCCCAAGGCTCTTT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCTGCCTGACCTGCTCCTaGGCAACCTGGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSCLTCS*ATWYSS
Trigger: GGAGCTGTACCAGGTTGCCCAGGAGCAGGTCAGGCA...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCCTGACCTGCTCCTaGGCAACCTGGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYCLTCS*ATWYSS
Trigger: GGAGCTGTACCAGGTTGCCCAGGAGCAGGTCAGGCA...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTATGCCTGACCTGCTCCTaGGCAACCTGGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLCLTCS*ATWYSS
Trigger: GGAGCTGTACCAGGTTGCCCAGGAGCAGGTCAGGCA...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGGAGAATTCAGTCAGCTaGGCTCGCAGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWENSVS*ARRARK
Trigger: CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTC...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGCAAGTCAGGGTGCCTaGTCCAGTGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVASQGA*SSAAAA
Trigger: AGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGGTGCAGCGGGGACCTaGCTGACACACAGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLGAAGT*LTHRLA
Trigger: AGCTAGCCTGTGTGTCAGCCAGGTCCCCGCTGCACC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGCAATAGTGGCCGCATaGTGGCAGTGGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLAIVAA*WQWQAG
Trigger: ACCTGCCTGCCACTGCCACCATGCGGCCACTATTGC...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAACCTCCTCCAGCCTCTaGTCTGCGGCAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVTSSSL*SAAGSN
Trigger: ATTGCTGCCTGCCGCAGACCAGAGGCTGGAGGAGGT...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCACCTCCTCCAGCCTCTaGTCTGCGGCAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVTSSSL*SAAGSN
Trigger: ATTGCTGCCTGCCGCAGACCAGAGGCTGGAGGAGGT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAACAGTAGGGGATGCCTaGGGCAGGGCACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLTVGDA*GRAPPP
Trigger: TGGAGGAGGTGCCCTGCCCCAGGCATCCCCTACTGT...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGGGGTCAGAGCTGCCTaGTGGAGGCACAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQGVRAA*WRHSRG
Trigger: TCCCCTACTGTGCCTCCACCAGGCAGCTCTGACCCC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGGGGTCAGAGCTGCCTaGTGGAGGCACAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYGVRAA*WRHSRG
Trigger: TCCCCTACTGTGCCTCCACCAGGCAGCTCTGACCCC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTACATACTCCCGCTCCGTaGCCACCATCTCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVHTPAP*PPSLPA
Trigger: TGCTGGCAGAGATGGTGGCCACGGAGCGGGAGTATG...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAACATACTCCCGCTCCGTaGCCACCATCTCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEHTPAP*PPSLPA
Trigger: TGCTGGCAGAGATGGTGGCCACGGAGCGGGAGTATG...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATATAGGCCACTCGTGGTaGGTGCCGGGTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYIGHSW*VPGASL
Trigger: GAGGCTTGCACCCGGCACCCACCACGAGTGGCCTAT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATTTCCGTGCCGCAGCTaGAAGTGCACAAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTFPCRS*KCTRLW
Trigger: CCAGAGCCTTGTGCACTTCCAGCTGCGGCACGGAAA...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTATGTGTCAACCCCTGTaGGCCCATGGCGAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAMCQPL*AHGEAC
Trigger: GCAAGCCTCGCCATGGGCCCACAGGGGTTGACACAT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAATGTGTCAACCCCTGTaGGCCCATGGCGAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATMCQPL*AHGEAC
Trigger: GCAAGCCTCGCCATGGGCCCACAGGGGTTGACACAT...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGCACAAAGGTGTCCCTaGCCTTGCGGCGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQAQRCP*PCGGGT
Trigger: GGTTCCGCCGCCGCAAGGCCAGGGACACCTTTGTGC...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTCCAAAGCAGGTaGGAGATGTCAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGCLQSR*EMSAVQ
Trigger: CTGGACAGCTGACATCTCCCACCTGCTTTGGAGGCA...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTTGCCTCCAAAGCAGGTaGGAGATGTCAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPCLQSR*EMSAVQ
Trigger: CTGGACAGCTGACATCTCCCACCTGCTTTGGAGGCA...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCGCACCTCCTTGTTGTaGACGGCCTGCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSRTSLL*TACLQS
Trigger: GCTTTGGAGGCAGGCCGTCCACAACAAGGAGGTGCG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTTGTTCCCCACACCCATaGACACCATCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPCSPHP*TPSQPC
Trigger: GCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACA...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGTGTTCCCCACACCCATaGACACCATCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLCSPHP*TPSQPC
Trigger: GCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACA...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000569875.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTT +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSETGLRQ*TPESEL
Trigger: AAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGT...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGAGACCCAGAAGAGCTaGGTCTCTGTACAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGETQKS*VSVQVQ
Trigger: CTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGACCCAGAAGAGCTaGGTCTCTGTACAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLETQKS*VSVQVQ
Trigger: CTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTC...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCAGTGCTGCTTCCTCTaGGAAGCTGGGATACAGGGG +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVQCCFL*EAGIQG
Trigger: CCCCTGTATCCCAGCTTCCCAGAGGAAGCAGCACTG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACAGTGCTGCTTCCTCTaGGAAGCTGGGATACAGGGG +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTQCCFL*EAGIQG
Trigger: CCCCTGTATCCCAGCTTCCCAGAGGAAGCAGCACTG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGTGCTGCTTCCTCTaGGAAGCTGGGATACAGGGG +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLQCCFL*EAGIQG
Trigger: CCCCTGTATCCCAGCTTCCCAGAGGAAGCAGCACTG...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWLADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLLADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGAGCCACTGGAGCCACTaGCTGATGGGCATTGGGACG +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERSHWSH*LMGIGT
Trigger: CGTCCCAATGCCCATCAGCCAGTGGCTCCAGTGGCT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTAGCCACTGGAGCCACTaGCTGATGGGCATTGGGACG +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSASHWSH*LMGIGT
Trigger: CGTCCCAATGCCCATCAGCCAGTGGCTCCAGTGGCT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCAACCCACAACTGGGATaGGAGCTGGGGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFNPQLG*ELGTGE
Trigger: TTCTCCTGTCCCCAGCTCCCATCCCAGTTGTGGGTT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCTGCCTAGAGGCACATaGTCCCCCACCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSLPRGT*SPTSLQ
Trigger: CTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAACTGCCTAGAGGCACATaGTCCCCCACCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSELPRGT*SPTSLQ
Trigger: CTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAG...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTTCTTCCTGAGGGGTaGGGGCACCCTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLVLPEG*GHPSHC
Trigger: GCAGTGACTAGGGTGCCCCCACCCCTCAGGAAGAAC...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAGTTCTTCCTGAGGGGTaGGGGCACCCTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATVLPEG*GHPSHC
Trigger: GCAGTGACTAGGGTGCCCCCACCCCTCAGGAAGAAC...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGTTCTTCCTGAGGGGTaGGGGCACCCTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALVLPEG*GHPSHC
Trigger: GCAGTGACTAGGGTGCCCCCACCCCTCAGGAAGAAC...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCTTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCGGAAGGGAAATGACTTaGGTCTGCCTTGGACCACCT +
Preference number: 4 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGGREMT*VCLGPP
Trigger: AGGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCC...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CAA 72 bp AGCAGCTCCTCAAAAAGGAAGATGCGGCGCACGGACTaGTGGCGCCCAGTGCGCACCACAAACTCATCCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSKRKMRRTD*WRPVRTTNSSC
Trigger: ACAGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGGAGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGAGGAGCCTTCTTCATaGGCAGGTCTGGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSEEPSS*AGLAAR
Trigger: TCTGGCAGCCAGACCTGCTCATGAAGAAGGCTCCTC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCCAGTGTGAACCGCGCTaGAGACAGTCGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSQCEPR*RQSSGT
Trigger: AGTCCCACTCGACTGTCTTCAGCGCGGTTCACACTG...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACAGTGTGAACCGCGCTaGAGACAGTCGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLQCEPR*RQSSGT
Trigger: AGTCCCACTCGACTGTCTTCAGCGCGGTTCACACTG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCACCCTGTGCCAAGCTaGGGTGGGAGGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEHPVPS*GGRTWG
Trigger: GCCCCATGTCCTCCCACCTCAGCTTGGCACAGGGTG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR TCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTTCTTGTAGTTGGCTaGGCCCAGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCLLVVG*AQRRGK
Trigger: CTTCCCTCTTCTCTGGGCTCAGCCAACTACAAGAAG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCTTCTTGTAGTTGGCTaGGCCCAGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGLLVVG*AQRRGK
Trigger: CTTCCCTCTTCTCTGGGCTCAGCCAACTACAAGAAG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCTTCTTGTAGTTGGCTaGGCCCAGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWLLVVG*AQRRGK
Trigger: CTTCCCTCTTCTCTGGGCTCAGCCAACTACAAGAAG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTCTGCTGTAGCAGCTaGCCGACCTCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEVCCSS*PTSPGS
Trigger: GGAGCCTGGGGAGGTCGGTCAGCTGCTACAGCAGAC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCACCTGGTACAGCTCCTaGAAAGAGCCTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSTWYSS*KEPWAW
Trigger: CCAGGCCCAAGGCTCTTTTCAGGAGCTGTACCAGGT...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAACCTGGTACAGCTCCTaGAAAGAGCCTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALTWYSS*KEPWAW
Trigger: CCAGGCCCAAGGCTCTTTTCAGGAGCTGTACCAGGT...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGACGTCAAGGCCTCCCTaGAGAGCTGAAACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLTSRPP*RAETAS
Trigger: AGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGT...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCCTTGCTGCTTGTCCTTaGAGAAGGTGTGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFLAACP*RRCAHS
Trigger: GCTATGGGCACACCTTCTTCAAGGACAAGCAGCAAG...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCATGGCGAGGCTTGCTaGAGAGCAGCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAHGEAC*RAAAPQ
Trigger: TTGAGGAGCTGCTGCTCTTCAGCAAGCCTCGCCATG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCCCACAGCACTCAGTaGGACCAAGGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGSHSTQ*DQGLPS
Trigger: AGATGGCAGACCTTGGTCTCACTGAGTGCTGTGGGA...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGACTGGAGCCACTGGCTaGTGGGCATTGGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERTGATG*WALGRD
Trigger: ATCTCGTCCCAATGCCCATCAGCCAGTGGCTCCAGT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCACTGGAGCCACTGGCTaGTGGGCATTGGGACGAGAT +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLTGATG*WALGRD
Trigger: ATCTCGTCCCAATGCCCATCAGCCAGTGGCTCCAGT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCAGGAAAGGCAAGCATaGGGGCCCAGTAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAQERQA*GPSRGG
Trigger: TCCACCTCTACTGGGCCCTCATGCTTGCCTTTCCTG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCACCTCCCTGAAGAGCTaGAACAGCCTCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSTSLKS*NSLSAS
Trigger: GGATGCTGAGAGGCTGTTTCAGCTCTTCAGGGAGGT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393966.1
CDS-3UTR GCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACCGAGAGCTACAGGTTaGATGGCCCAGGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGPRATG*MAQDGK
Trigger: TTTGCCATCCTGGGCCATGCAACCTGTAGCTCTCGG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGAGAGGGGGCACCGGGTaGAACGGCTTCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLERGGTG*NGFPGS
Trigger: AGAGCCAGGGAAGCCGTTGCACCCGGTGCCCCCTCT...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAATGGGAAGGTCAGCTCTaGGACCAGGAGAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEWEGQL*DQEKTL
Trigger: CAGGGTCTTCTCCTGGTCGCAGAGCTGACCTTCCCA...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCGCTCCAGGAACTCTaGTCTTTGAGCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLALQEL*SLSLTL
Trigger: GAGGGTGAGGCTCAAAGAGCAGAGTTCCTGGAGCGC...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTGGGTCCTTAACGTaGATCTGGGAAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLPGSLT*IWEAGS
Trigger: GGAACCTGCTTCCCAGATGCACGTTAAGGACCCAGG...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTATCCTGGACAAGGGGCTaGCCTGTAGCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVSWTRG*PVAPHP
Trigger: AGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGA...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTCCTGGACAAGGGGCTaGCCTGTAGCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLSWTRG*PVAPHP
Trigger: AGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGA...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAAGGAGCTTTCTACTGTaGCCCTCTGGGCATCCCCCG +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQRSFLL*PSGHPP
Trigger: CGGGGGATGCCCAGAGGGGCACAGTAGAAAGCTCCT...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATACACAGAAGCAGCACTaGCCGGCCTTGGACATCCCG +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYTQKQH*PALDIP
Trigger: CGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGAGTCTAGCACCTGCTaGATCAGGACCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAESSTC*IRTSVC
Trigger: GCAGACAGAGGTCCTGATGCAGCAGGTGCTAGACTC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTACCTCTGGGACCTCTTaGTTCAGCCATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQATSGTS*FSHVSS
Trigger: GGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGT...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGTCAGCCTTGTCCATTaGCGTCCTGTAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLVSLVH*RPVVWA
Trigger: AGCCCAGACTACAGGACGGCAATGGACAAGGCTGAC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCCCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGPVFAG*SAGSVG
Trigger: ACCAACTGACCCTGCAGAGCAACCAGCGAATACAGG...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWPVFAG*SAGSVG
Trigger: ACCAACTGACCCTGCAGAGCAACCAGCGAATACAGG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACACACTTCAATCTGGTaGAGTCCGCTTTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLHTSIW*SPLSRA
Trigger: GGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCAGCCAGTCAGCGGCTaGAGAAACTTCTCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYQPVSG*RNFSPC
Trigger: GCAAGGGGAGAAGTTTCTGCAGCCGCTGACTGGCTG...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCATCTGCCAACACTCGCTaGCCCTCCTCAGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSSANTR*PSSAHV
Trigger: GACGTGGGCTGAGGAGGGGCAGCGAGTGTTGGCAGA...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGAGGCACAGTAGGGGATaGCTGGGGCAGGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLERHSRG*LGQGTS
Trigger: GGAGGTGCCCTGCCCCAGGCATCCCCTACTGTGCCT...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCAGCTTCTCCAGGTTaGCAAAGAGGTGGGCACGCT +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYAASPG*QRGGHA
Trigger: AGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGCAGCTTCTCCAGGTTaGCAAAGAGGTGGGCACGCT +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLAASPG*QRGGHA
Trigger: AGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGC...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCAGCGAGGCTTATTCTTaGTGTAGAGCGCGTACATCC +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCSEAYS*CRARTS
Trigger: GGATGTACGCGCTCTACAGCAAGAATAAGCCTCGCT...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTCCCCCAGTGCTTGCTaGTTGTCCTTGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWSPSAC*LSLKKV
Trigger: CACCTTCTTCAAGGACAAGCAGCAAGCACTGGGGGA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGTCCCCCAGTGCTTGCTaGTTGTCCTTGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: FRWPPGAGHKLPGSSVVESPSAC*LSLKKV
Trigger: CACCTTCTTCAAGGACAAGCAGCAAGCACTGGGGGA...CTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCTGGTCCCCCAGTGCTTaGTGCTTGTCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFWSPSA*CLSLKK
Trigger: CTTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCA...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGTGCGTACTTGCCCATaGGCTGGATGGGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAVRTCP*AGWALA
Trigger: TGCTAAAGCCCATCCAGCGCATGGGCAAGTACGCAC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCCTGTCGCACCAGCTaGCCCTGTTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGSCRTS*PCSLRL
Trigger: TAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGA...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAACTTGTGGCGCCCAGTaGGCACCACAAACTCATCCT +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTTCGAQ*APQTHP
Trigger: AGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGT...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACCTCAAAAAGGAAGATaGGGCGCACGGACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPPQKGR*GARTCG
Trigger: GCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCTCAAAAAGGAAGATaGGGCGCACGGACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVPQKGR*GARTCG
Trigger: GCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTCTCGAAGCGCAGGTTaGTGTTCCCACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVSRSAG*CSHSTQ
Trigger: CTGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGA...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCATCTCGAAGCGCAGGTTaGTGTTCCCACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPSRSAG*CSHSTQ
Trigger: CTGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGA...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTTGTTGTGGACGGCCTaGCTCCAAAGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSLLWTA*LQSRWE
Trigger: CTCCCACCTGCTTTGGAGGCAGGCCGTCCACAACAA...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCACACCATCTCAGCCATaGGCACCTCCTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCTPSQP*APPCCG
Trigger: TCCACAACAAGGAGGTGCGCATGGCTGAGATGGTGT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCCCCTACCCAGGGCCTaGCCTGACACACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGPLPRA*PDTQLL
Trigger: CAGCAGCTGTGTGTCAGGGCAGGCCCTGGGTAGGGG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATLGAAG*WIYCSS
Trigger: GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp CCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCTGGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PTSSTWYTAPGAASCSWLGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...CAGCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCTTACAACAGGCACAGTaGGACCAACAGCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCLQQAQ*DQQQSP
Trigger: GGGAGATTGCTGTTGGTCCCACTGTGCCTGTTGTAA...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLECRRRA*AAGGAS
Trigger: ACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTGAAGACAGTCGAGTaGGACTCAGTGGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCLKTVE*DSVGNA
Trigger: TGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAATGGCCCTGAGAGTCTaGGGACTCATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPMALRV*GLIPIL
Trigger: GAGAATGGGGATGAGTCCCCAGACTCTCAGGGCCAT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCATGGCCCTGAGAGTCTaGGGACTCATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAMALRV*GLIPIL
Trigger: GAGAATGGGGATGAGTCCCCAGACTCTCAGGGCCAT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACAAATCTCCAGTCGGTaGCATGGCCCTGAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGQISSR*HGPESL
Trigger: CAGACTCTCAGGGCCATGCCACCGACTGGAGATTTG...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTCAAATCTCCAGTCGGTaGCATGGCCCTGAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAQISSR*HGPESL
Trigger: CAGACTCTCAGGGCCATGCCACCGACTGGAGATTTG...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACAAATCTCCAGTCGGTaGCATGGCCCTGAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPQISSR*HGPESL
Trigger: CAGACTCTCAGGGCCATGCCACCGACTGGAGATTTG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCTCCTTAACGTGCATCTaGGAAGCAGGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARSLFRLYNQTSLERPRASLTCI*EAGSSS
Trigger: AGAGGAGGAACCTGCTTCCCAGATGCACGTTAAGGA...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTTGGTCTTGGAGGACCTaGGTCCTTAACGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPWSWRT*VLNVHL
Trigger: CAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCA...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTGGTCTTGGAGGACCTaGGTCCTTAACGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWWSWRT*VLNVHL
Trigger: CAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGCTGGGGGTAACTaGAATTTCCTGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAAAGGN*NFLDKG
Trigger: CCCCTTGTCCAGGAAATTCCAGTTACCCCCAGCTGC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGCAGCTGGGGGTAACTaGAATTTCCTGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSAAGGN*NFLDKG
Trigger: CCCCTTGTCCAGGAAATTCCAGTTACCCCCAGCTGC...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGTCTACTGTGCCCCTCTaGGCATCCCCCGACTCATCT +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERSTVPL*ASPDSS
Trigger: AGATGAGTCGGGGGATGCCCAGAGGGGCACAGTAGA...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAATCTACTGTGCCCCTCTaGGCATCCCCCGACTCATCT +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSESTVPL*ASPDSS
Trigger: AGATGAGTCGGGGGATGCCCAGAGGGGCACAGTAGA...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTTACCAACCCTACCCCTaGGGTGTCACTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSAYQPYP*GVTLTL
Trigger: CAGGGTGAGAGTGACACCCCAGGGGTAGGGTTGGTA...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAATCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSESQQRS*ARRQSA
Trigger: TGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGA...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTAGGTGGCCATACCACTaGCCAGCAGCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSARWPYH*PAAPNR
Trigger: TCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGAGTCCCTGGCAAGGTaGCCATACCACTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYESLAR*PYHWPA
Trigger: TGCTGGCCAGTGGTATGGCCACCTTGCCAGGGACTC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGACATCCCGAGTCCCTaGCAAGGTGGCCATACCACT +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALDIPSP*QGGHTT
Trigger: AGTGGTATGGCCACCTTGCCAGGGACTCGGGATGTC...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGACATCCCGAGTCCCTaGCAAGGTGGCCATACCACT +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSDIPSP*QGGHTT
Trigger: AGTGGTATGGCCACCTTGCCAGGGACTCGGGATGTC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACCTGTACTTCGGGCCTaGGGATGCTTCGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLPVLRA*GCFAGT
Trigger: TGTACCTGCGAAGCATCCCCAGGCCCGAAGTACAGG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCCTGTACTTCGGGCCTaGGGATGCTTCGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYPVLRA*GCFAGT
Trigger: TGTACCTGCGAAGCATCCCCAGGCCCGAAGTACAGG...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCAGCTGCTAGGAGCCCACCTGTGTTCTTCCTGAGGGGTGGGGGCACCCTAGTCGAAGAGGGAAGAACTTaGAGCACAAATTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: SAARSPPVFFLRGGGTLVEEGRT*STNSGI
Trigger: GATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTC...GACTAGGGTGCCCCCACCCCTCAGGAAGAACACAGGTGGGCTCCTAGCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGCTGCTTCTTGTAGTTaGCTGAGCCCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCAASCS*LSPEKR
Trigger: CCTCTTCTCTGGGCTCAGCCAACTACAAGAAGCAGC...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCCCACTAGCAGCACCTaGTACACGGCCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGPTSST*YTAPGA
Trigger: AGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCTCCTCCTAGCGAAGTaGGCAGCCCCGCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGLLLAK*AAPPLG
Trigger: TCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGGGCACAAGCTGCCTaGCAGTTCTGTAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCRAQAA*QFCSRA
Trigger: AGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTAGGGCACAAGCTGCCTaGCAGTTCTGTAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPRAQAA*QFCSRA
Trigger: AGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAAGGGCACAAGCTGCCTaGCAGTTCTGTAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMERAQAA*QFCSRA
Trigger: AGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCT...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACCAGGCTCCATGGGCTaGGGCACAGCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQPGSMG*GTAFTL
Trigger: AAGTGTGAAGGCTGTGCCCCAGCCCATGGAGCCTGG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGCTCAGGGTCACCTCTaGGACCTCTTGCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSAQGHL*DLLLQP
Trigger: TGGCTGAAGCAAGAGGTCCCAGAGGTGACCCTGAGC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTLCRVS*CSNPST
Trigger: GGTGGATGGATTGCTGCACCAACTGACCCTGCAGAG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGGGCCTGTATTCGCTaGTTGCTCTGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSRACIR*LLCRVS
Trigger: ACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACGGGCCTCCAGTGTTTaGACCAACTCTAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLRASSV*TNSRAC
Trigger: ACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGAGCCACACTTCAATCTaGTGCAGTCCGCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSRASSVWTNSRACIRWLSHTSI*CSPLSR
Trigger: CCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCT...CAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGAGAATTCAGTCAGCTaGGCTCGCAGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAENSVS*ARRARK
Trigger: CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGCAAGTCAGGGTGCCTaGTCCAGTGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYASQGA*SSAAAA
Trigger: AGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGCAAGTCAGGGTGCCTaGTCCAGTGCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLASQGA*SSAAAA
Trigger: AGCTGCAGCTGCACTGGACCAGGCACCCTGACTTGC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGAAGCCTCAAGCTTTTaGTCCAGGGCCAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYEASSF*SRASQV
Trigger: CACCTGGCTGGCCCTGGACCAAAAGCTTGAGGCTTC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCATAGTGGCCGCATGGTaGCAGTGGCAGGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLIVAAW*QWQAGS
Trigger: TGAACCTGCCTGCCACTGCCACCATGCGGCCACTAT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAACCTCCTCCAGCCTCTaGTCTGCGGCAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLTSSSL*SAAGSN
Trigger: ATTGCTGCCTGCCGCAGACCAGAGGCTGGAGGAGGT...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGTCAGAGCTGCCTGGTaGAGGCACAGTAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQVRAAW*RHSRGC
Trigger: GCATCCCCTACTGTGCCTCCACCAGGCAGCTCTGAC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAAGGAAGAAGTGGCAGTaGAAGTCCCGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPRKKWQ*KSRSFS
Trigger: GGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTATCACGCAGGAAGAAGTaGCAGTGGAAGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALSRRKK*QWKSRS
Trigger: GCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGA...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTATTTCCGTGCCGCAGCTaGAAGTGCACAAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLFPCRS*KCTRLW
Trigger: CCAGAGCCTTGTGCACTTCCAGCTGCGGCACGGAAA...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCACCTCCTTGTTGTaGACGGCCTGCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLRTSLL*TACLQS
Trigger: GCTTTGGAGGCAGGCCGTCCACAACAAGGAGGTGCG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTGTTCCCCACACCCATaGACACCATCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALACSPHP*TPSQPC
Trigger: GCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACA...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTTGTTCCCCACACCCATaGACACCATCTCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQACSPHP*TPSQPC
Trigger: GCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACA...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000569875.5
CDS-3UTR CCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTACAGTGCTGCTTCCTCTaGGAAGCTGGGATACAGGGG +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALQCCFL*EAGIQG
Trigger: CCCCTGTATCCCAGCTTCCCAGAGGAAGCAGCACTG...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTGCTGCTTCCTCTaGGAAGCTGGGATACAGGGG +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVQCCFL*EAGIQG
Trigger: CCCCTGTATCCCAGCTTCCCAGAGGAAGCAGCACTG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACAGTGCTGCTTCCTCTaGGAAGCTGGGATACAGGGG +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATQCCFL*EAGIQG
Trigger: CCCCTGTATCCCAGCTTCCCAGAGGAAGCAGCACTG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVLADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVLADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCAACCCACAACTGGGATaGGAGCTGGGGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVNPQLG*ELGTGE
Trigger: TTCTCCTGTCCCCAGCTCCCATCCCAGTTGTGGGTT...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGTTCTTAACCCACAACTaGGATGGGAGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLFLTHN*DGSWGQ
Trigger: CTGTCCCCAGCTCCCATCCCAGTTGTGGGTTAAGAA...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCCTAGAGGCACATaGTCCCCCACCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLLPRGT*SPTSLQ
Trigger: CTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
3UTR CAA 72 bp ACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TLVTADPERQCS*ELQAAGSTARP
Trigger: TGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCTACCCCTGCCCTCCTaGGGCTCCACATCTATGTAT +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSLPLPS*GSTSMY
Trigger: ATACATAGATGTGGAGCCTCAGGAGGGCAGGGGTAG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGCACACATACCCCTGTaGATGCCAGAGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVAHIPL*MPEAKK
Trigger: CTTCTTTGCCTCTGGCATTCACAGGGGTATGTGTGC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACAGGAACTCTGCTCTTTaGGCCTCACCCTCCTCACCT +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYRNSAL*ASPSSP
Trigger: AGGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCT...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTAGCCGCGGGGAACCGTaGAGTCGGACAGCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGSRGEP*SRTAFE
Trigger: TTCGAAGGCTGTCCGACTTCACGGTTCCCCGCGGCT...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000563969.5
CDS-3UTR TCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTCAGTGTGAACCGCGCTaGAGACAGTCGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVQCEPR*RQSSGT
Trigger: AGTCCCACTCGACTGTCTTCAGCGCGGTTCACACTG...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTCGGTGGCATGGCCCTaGGAGTCTGGGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGSVAWP*ESGDSS
Trigger: GGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCTTCCCAGGCATCCCTaGAACTGCACACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: VFAGCSAGSVGAAIHPPGLPRHP*NCTQQI
Trigger: GATTTGCTGTGTGCAGTTTCAGGGATGCCTGGGAAG...ACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCTTCCCAGGCATCCCTaGAACTGCACACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVLPRHP*NCTQQI
Trigger: GATTTGCTGTGTGCAGTTTCAGGGATGCCTGGGAAG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCTGCTGCACTCAGACTaGAGCCAGGCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLELLHSD*SQAGLW
Trigger: CCACAGCCCAGCCTGGCTTCAGTCTGAGTGCAGCAG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAACCTGGTACAGCTCCTaGAAAGAGCCTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLTWYSS*KEPWAW
Trigger: CCAGGCCCAAGGCTCTTTTCAGGAGCTGTACCAGGT...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCACGTCAAGGCCTCCCTaGAGAGCTGAAACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVTSRPP*RAETAS
Trigger: AGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAACGTCAAGGCCTCCCTaGAGAGCTGAAACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATTSRPP*RAETAS
Trigger: AGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGT...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCTTGCTGCTTGTCCTTaGAGAAGGTGTGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALALAACP*RRCAHS
Trigger: GCTATGGGCACACCTTCTTCAAGGACAAGCAGCAAG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATCCTGTCGCACCAGCTGCCCCTGTTCCTTGAGGTTAACATCACAGCCCTGGATTCCCACAGCACTCAGTaGGACCAAGGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: ILSHQLPLFLEVNITALDSHSTQ*DQGLPS
Trigger: AGATGGCAGACCTTGGTCTCACTGAGTGCTGTGGGA...ATCCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR TCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACAGGAAAGGCAAGCATaGGGGCCCAGTAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLQERQA*GPSRGG
Trigger: TCCACCTCTACTGGGCCCTCATGCTTGCCTTTCCTG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGCCTAGACTCCTTCTCTaGGACACCAAAGGCCTAACA +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLPRLLL*DTKGLT
Trigger: TGTTAGGCCTTTGGTGTCTCAGAGAAGGAGTCTAGG...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCCTAGACTCCTTCTCTaGGACACCAAAGGCCTAACA +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPPRLLL*DTKGLT
Trigger: TGTTAGGCCTTTGGTGTCTCAGAGAAGGAGTCTAGG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCTTGGGAAGGGAAATaGCTTGGGTCTGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYAWEGK*LGSALD
Trigger: GTCCAAGGCAGACCCAAGTCATTTCCCTTCCCAAGC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTGGCACAGAATAAATaGTTTGGGGCGCCTGACACT +
Preference number: 4 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCLAQNK*FGAPDT
Trigger: AGTGTCAGGCGCCCCAAAGCATTTATTCTGTGCCAG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTGATCCTCTACCCCTTTaGCATCCCTGGCACCCCCTT +
Preference number: 4 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVDPLPL*HPWHPL
Trigger: AAGGGGGTGCCAGGGATGGCAAAGGGGTAGAGGATC...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCCAGGGCACAGGAACTaGAATTCAGGCCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSAPGHRN*NSGLGR
Trigger: TCTTCCCAGGCCTGAATTGCAGTTCCTGTGCCCTGG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCCTGGGTCCTTAACGTaGATCTGGGAAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERPGSLT*IWEAGS
Trigger: GGAACCTGCTTCCCAGATGCACGTTAAGGACCCAGG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAACCTGGGTCCTTAACGTaGATCTGGGAAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEPGSLT*IWEAGS
Trigger: GGAACCTGCTTCCCAGATGCACGTTAAGGACCCAGG...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTATCCTGGACAAGGGGCTaGCCTGTAGCTCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLSWTRG*PVAPHP
Trigger: AGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGA...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGAGGAGCTTTCTACTGTaGCCCTCTGGGCATCCCCCG +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQRSFLL*PSGHPP
Trigger: CGGGGGATGCCCAGAGGGGCACAGTAGAAAGCTCCT...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGCAGATGGCATCGCCCTaGTTGGACCTGGGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQQMASP*LDLGPL
Trigger: TAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTG...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSALPSAA*FPLAAP
Trigger: AGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTALPSAA*FPLAAP
Trigger: AGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGAGTCTAGCACCTGCTaGATCAGGACCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSESSTC*IRTSVC
Trigger: GCAGACAGAGGTCCTGATGCAGCAGGTGCTAGACTC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGTCAGCCTTGTCCATTaGCGTCCTGTAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSVSLVH*RPVVWA
Trigger: AGCCCAGACTACAGGACGGCAATGGACAAGGCTGAC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLIRWLL*RVSWCS
Trigger: GCTGCACCAACTGACCCTGCAGAGCAACCAGCGAAT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEIRWLL*RVSWCS
Trigger: GCTGCACCAACTGACCCTGCAGAGCAACCAGCGAAT...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTPVFAG*SAGSVG
Trigger: ACCAACTGACCCTGCAGAGCAACCAGCGAATACAGG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTCTGCCAACACTCGCTaGCCCTCCTCAGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGSANTR*PSSAHV
Trigger: GACGTGGGCTGAGGAGGGGCAGCGAGTGTTGGCAGA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCTGGTCCCCCAGTGCTTaGTGCTTGTCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVWSPSA*CLSLKK
Trigger: CTTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCA...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTACAGGTGGTCCCCCAGTaGTTGCTGCTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVQVVPQ*LLLVLE
Trigger: TTCAAGGACAAGCAGCAAGCACTGGGGGACCACCTG...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGTCCTGTCGCACCAGCTaGCCCTGTTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERSCRTS*PCSLRL
Trigger: TAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGA...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACACTTGTGGCGCCCAGTaGGCACCACAAACTCATCCT +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYTCGAQ*APQTHP
Trigger: AGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGT...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCACTTGTGGCGCCCAGTaGGCACCACAAACTCATCCT +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLTCGAQ*APQTHP
Trigger: AGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAACTTGTGGCGCCCAGTaGGCACCACAAACTCATCCT +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVTCGAQ*APQTHP
Trigger: AGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGT...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACCTCAAAAAGGAAGATaGGGCGCACGGACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATPQKGR*GARTCG
Trigger: GCCACAAGTCCGTGCGCCGCATCTTCCTTTTTGAGG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTAGTGAGACCAAGGTCTaGCATCTTGAAGGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPSETKV*HLEGAL
Trigger: AAGCGCTCCTTCAAGATGGCAGACCTTGGTCTCACT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAATCTCGAAGCGCAGGTTaGTGTTCCCACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSESRSAG*CSHSTQ
Trigger: CTGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGA...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTTCTCGAAGCGCAGGTTaGTGTTCCCACAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTASRSAG*CSHSTQ
Trigger: CTGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGA...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTACACCATCTCAGCCATaGGCACCTCCTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQATPSQP*APPCCG
Trigger: TCCACAACAAGGAGGTGCGCATGGCTGAGATGGTGT...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCACACCATCTCAGCCATaGGCACCTCCTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVTPSQP*APPCCG
Trigger: TCCACAACAAGGAGGTGCGCATGGCTGAGATGGTGT...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 4 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 4 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCATGGCCCTGAGAGTCTaGGGACTCATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVMALRV*GLIPIL
Trigger: GAGAATGGGGATGAGTCCCCAGACTCTCAGGGCCAT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCATGGCCCTGAGAGTCTaGGGACTCATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLMALRV*GLIPIL
Trigger: GAGAATGGGGATGAGTCCCCAGACTCTCAGGGCCAT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAAATCTCCAGTCGGTaGCATGGCCCTGAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVQISSR*HGPESL
Trigger: CAGACTCTCAGGGCCATGCCACCGACTGGAGATTTG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTGGTCTTGGAGGACCTaGGTCCTTAACGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAWSWRT*VLNVHL
Trigger: CAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCA...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCATGGTCTTGGAGGACCTaGGTCCTTAACGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPWSWRT*VLNVHL
Trigger: CAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCA...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTGTAGCTCCTCATCCTaGGTGGCCCCGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLECSSSS*VAPAGG
Trigger: ACCACCAGCCGGGGCCACCCAGGATGAGGAGCTACA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGTAGCTCCTCATCCTaGGTGGCCCCGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGCSSSS*VAPAGG
Trigger: ACCACCAGCCGGGGCCACCCAGGATGAGGAGCTACA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGCAGCTGGGGGTAACTaGAATTTCCTGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSAAGGN*NFLDKG
Trigger: CCCCTTGTCCAGGAAATTCCAGTTACCCCCAGCTGC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGACATCCCGAGTCCCTaGCAAGGTGGCCATACCACT +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYDIPSP*QGGHTT
Trigger: AGTGGTATGGCCACCTTGCCAGGGACTCGGGATGTC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATAGACTGAAGCCAGGCTaGGCTGTGGGCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYRLKPG*AVGTQK
Trigger: CTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGGCCAGAAAGGAAGAGGGAAGAACTTaGAGCACAAATTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: RWAKALENSVSWARRARKEEGRT*STNSGI
Trigger: GATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTC...CTTTCTGGCCCTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGCTGCTTCTTGTAGTTaGCTGAGCCCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLAASCS*LSPEKR
Trigger: CCTCTTCTCTGGGCTCAGCCAACTACAAGAAGCAGC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGAGGGCACAAGCTGCCTaGCAGTTCTGTAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLRAQAA*QFCSRA
Trigger: AGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCT...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGTGCCGTCCTGTAGTCTaGGCTCAGGGTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQCRPVV*AQGHLW
Trigger: CCAGAGGTGACCCTGAGCCCAGACTACAGGACGGCA...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCCTCTGCAGGGTCAGTTaGTGCAGCAATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSLCRVS*CSNPST
Trigger: GGTGGATGGATTGCTGCACCAACTGACCCTGCAGAG...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGGGCCTGTATTCGCTaGTTGCTCTGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSRACIR*LLCRVS
Trigger: ACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGCCACACTTCAATCTaGTGCAGTCCGCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSSHTSI*CSPLSR
Trigger: CCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGCCACACTTCAATCTaGTGCAGTCCGCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSSHTSI*CSPLSR
Trigger: CCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCT...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTAGCCACACTTCAATCTaGTGCAGTCCGCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTASHTSI*CSPLSR
Trigger: CCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATATAGTGGCCGCATGGTaGCAGTGGCAGGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYIVAAW*QWQAGS
Trigger: TGAACCTGCCTGCCACTGCCACCATGCGGCCACTAT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGAGGAAGAAGTGGCAGTaGAAGTCCCGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERRKKWQ*KSRSFS
Trigger: GGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTAGGAAGAAGTGGCAGTaGAAGTCCCGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSARKKWQ*KSRSFS
Trigger: GGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTATCACGCAGGAAGAAGTaGCAGTGGAAGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLSRRKK*QWKSRS
Trigger: GCTGCGGGACTTCCACTGCCACTTCTTCCTGCGTGA...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATTTTCCGTGCCGCAGCTaGAAGTGCACAAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYFPCRS*KCTRLW
Trigger: CCAGAGCCTTGTGCACTTCCAGCTGCGGCACGGAAA...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTACCCCTGTGGGCCCATaGCGAGGCTTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGTPVGP*RGLLKS
Trigger: GCTCTTCAGCAAGCCTCGCCATGGGCCCACAGGGGT...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCTGCCTCCAAAGCAGGTaGGAGATGTCAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSCLQSR*EMSAVQ
Trigger: CTGGACAGCTGACATCTCCCACCTGCTTTGGAGGCA...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTATGCCTCCAAAGCAGGTaGGAGATGTCAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALCLQSR*EMSAVQ
Trigger: CTGGACAGCTGACATCTCCCACCTGCTTTGGAGGCA...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAACGGGGCTACGGCAATaGACGCCCGAGAGCGAACTT +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSTGLRQ*TPESEL
Trigger: AAGTTCGCTCTCGGGCGTCCATTGCCGTAGCCCCGT...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGAGACCCAGAAGAGCTaGGTCTCTGTACAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERETQKS*VSVQVQ
Trigger: CTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAGAGACCCAGAAGAGCTaGGTCTCTGTACAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEETQKS*VSVQVQ
Trigger: CTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTC...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACAGAGACCCAGAAGAGCTaGGTCTCTGTACAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATETQKS*VSVQVQ
Trigger: CTGCACCTGTACAGAGACCCAGCTCTTCTGGGTCTC...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTGCAGTCAAAGAGGGCTaGCCGCCCAGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGAVKEG*PPSSAS
Trigger: TGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGC...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTACTGGCTGATGGGCATTaGGACGAGATCTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVLADGH*DEISES
Trigger: GGACTCAGAGATCTCGTCCCAATGCCCATCAGCCAG...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSAVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GGCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GQEPIQALQPDFPREAPCCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...GCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACAACCCACAACTGGGATaGGAGCTGGGGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYNPQLG*ELGTGE
Trigger: TTCTCCTGTCCCCAGCTCCCATCCCAGTTGTGGGTT...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTAACCCACAACTGGGATaGGAGCTGGGGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSANPQLG*ELGTGE
Trigger: TTCTCCTGTCCCCAGCTCCCATCCCAGTTGTGGGTT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATTCTTAACCCACAACTaGGATGGGAGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGFLTHN*DGSWGQ
Trigger: CTGTCCCCAGCTCCCATCCCAGTTGTGGGTTAAGAA...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGTTCTTAACCCACAACTaGGATGGGAGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LSRASSVWTNSRACIRWLFLTHN*DGSWGQ
Trigger: CTGTCCCCAGCTCCCATCCCAGTTGTGGGTTAAGAA...CAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCATTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCGGTAGCTGTGCGATTTaGGGTCCCTTTAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVGSCAI*GPFRAC
Trigger: ACATGCCCTAAAGGGACCTCAAATCGCACAGCTACC...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCAGTCAGGGAATCCTaGACTGATGAAAGCTACCCA +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQAAVRES*TDESYP
Trigger: TGGGTAGCTTTCATCAGTTCAGGATTCCCTGACTGC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCTTCCCAGGCATCCCTaGAACTGCACACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSLPRHP*NCTQQI
Trigger: GATTTGCTGTGTGCAGTTTCAGGGATGCCTGGGAAG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCTTCCCAGGCATCCCTaGAACTGCACACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSALPRHP*NCTQQI
Trigger: GATTTGCTGTGTGCAGTTTCAGGGATGCCTGGGAAG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTTCCCAGGCATCCCTaGAACTGCACACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTALPRHP*NCTQQI
Trigger: GATTTGCTGTGTGCAGTTTCAGGGATGCCTGGGAAG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCTTCCCAGGCATCCCTaGAACTGCACACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVLPRHP*NCTQQI
Trigger: GATTTGCTGTGTGCAGTTTCAGGGATGCCTGGGAAG...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCTTCTTGTAGTTGGCTaGGCCCAGAGAAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERLLVVG*AQRRGK
Trigger: CTTCCCTCTTCTCTGGGCTCAGCCAACTACAAGAAG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGGTCAGCAGGCTCTaGGAAGGCAACTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGWVSRL*EGNCSS
Trigger: GCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACCCA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAACGTCAAGGCCTCCCTaGAGAGCTGAAACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQTSRPP*RAETAS
Trigger: AGAGGCTGTTTCAGCTCTTCAGGGAGGCCTTGACGT...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCACATGGCGAGGCTTGCTaGAGAGCAGCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSHGEAC*RAAAPQ
Trigger: TTGAGGAGCTGCTGCTCTTCAGCAAGCCTCGCCATG...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTATCCCACAGCACTCAGTaGGACCAAGGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLSHSTQ*DQGLPS
Trigger: AGATGGCAGACCTTGGTCTCACTGAGTGCTGTGGGA...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGTTGGGACGAGATCTCTaGGTCCTCAGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLLGRDL*VLSSQR
Trigger: TCTTTGACTGCTGAGGACTCAGAGATCTCGTCCCAA...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCACAGGAAAGGCAAGCATaGGGGCCCAGTAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSQERQA*GPSRGG
Trigger: TCCACCTCTACTGGGCCCTCATGCTTGCCTTTCCTG...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCTAGACTCCTTCTCTaGGACACCAAAGGCCTAACA +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVPRLLL*DTKGLT
Trigger: TGTTAGGCCTTTGGTGTCTCAGAGAAGGAGTCTAGG...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAACATACCCCTGTGAATaGCAGAGGCAAAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPTYPCE*QRQRRA
Trigger: GGCTCTTCTTTGCCTCTGGCATTCACAGGGGTATGT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTGCTGTGTTGGTGCCCTaGCCCCTCATTTCACCCGCA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGAVLVP*PLISPA
Trigger: TGCGGGTGAAATGAGGGGGCAGGGCACCAACACAGC...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACCTGGGTCCTTAACGTaGATCTGGGAAGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQPGSLT*IWEAGS
Trigger: GGAACCTGCTTCCCAGATGCACGTTAAGGACCCAGG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGTCACTCTCACCCTGTaGCAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSVTLTL*QAEVGG
Trigger: TCCTCCCACCTCAGCTTGGCACAGGGTGAGAGTGAC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCACTGTCAGTCCCAGTaGCTGTACTTCGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEHCQSQ*LYFGPG
Trigger: CCCAGGCCCGAAGTACAGGCACTGGGACTGACAGTG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLLPSAA*FPLAAP
Trigger: AGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGAGTCTAGCACCTGCTaGATCAGGACCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLESSTC*IRTSVC
Trigger: GCAGACAGAGGTCCTGATGCAGCAGGTGCTAGACTC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGTCAGCCTTGTCCATTaGCGTCCTGTAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQVSLVH*RPVVWA
Trigger: AGCCCAGACTACAGGACGGCAATGGACAAGGCTGAC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAATTCGCTGGTTGCTCTaGAGGGTCAGTTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQIRWLL*RVSWCS
Trigger: GCTGCACCAACTGACCCTGCAGAGCAACCAGCGAAT...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTACCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALPVFAG*SAGSVG
Trigger: ACCAACTGACCCTGCAGAGCAACCAGCGAATACAGG...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCCTGTATTCGCTGGTTaGTCTGCAGGGTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: FPREAPCQLVQWPHTSERPVFAG*SAGSVG
Trigger: ACCAACTGACCCTGCAGAGCAACCAGCGAATACAGG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGGCCAGCCCACCTGCTaGAGCCACACTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEGQPTC*SHTSIW
Trigger: CCAGATTGAAGTGTGGCTGCAGCAGGTGGGCTGGCC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTCCCCTTGCCTGACCTaGTCCTGGGCAACCTGGTAC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLESPCLT*SWATWY
Trigger: GTACCAGGTTGCCCAGGAGCAGGTCAGGCAAGGGGA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGGTTCACTGAGACTCTaGCCCAGATTCCGATCGAAG +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLGSLRL*PRFRSK
Trigger: CTTCGATCGGAATCTGGGGCAGAGTCTCAGTGAACC...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGGTTCACTGAGACTCTaGCCCAGATTCCGATCGAAG +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSGSLRL*PRFRSK
Trigger: CTTCGATCGGAATCTGGGGCAGAGTCTCAGTGAACC...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTAGCGAGGCTTATTCTTaGTGTAGAGCGCGTACATCC +
Preference number: 4 (lower is better)
Translates to: HTLVTADPERQCSLELQASEAYS*CRARTS
Trigger: GGATGTACGCGCTCTACAGCAAGAATAAGCCTCGCT...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCAAGCGAGGCTTATTCTTaGTGTAGAGCGCGTACATCC +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPSEAYS*CRARTS
Trigger: GGATGTACGCGCTCTACAGCAAGAATAAGCCTCGCT...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTTCCCCCAGTGCTTGCTaGTTGTCCTTGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTASPSAC*LSLKKV
Trigger: CACCTTCTTCAAGGACAAGCAGCAAGCACTGGGGGA...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTGGTCCCCCAGTGCTTaGTGCTTGTCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLWSPSA*CLSLKK
Trigger: CTTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCA...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTTGGTCCCCCAGTGCTTaGTGCTTGTCCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSAWSPSA*CLSLKK
Trigger: CTTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCA...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACAGGTGGTCCCCCAGTaGTTGCTGCTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQQVVPQ*LLLVLE
Trigger: TTCAAGGACAAGCAGCAAGCACTGGGGGACCACCTG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTATCCTGTCGCACCAGCTaGCCCTGTTCCTTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLSCRTS*PCSLRL
Trigger: TAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGA...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATACTTGTGGCGCCCAGTaGGCACCACAAACTCATCCT +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYTCGAQ*APQTHP
Trigger: AGGATGAGTTTGTGGTGCGCACTGGGCGCCACAAGT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCAGTGAGACCAAGGTCTaGCATCTTGAAGGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: ERQCSLELQAAGSTARPVSETKV*HLEGAL
Trigger: AAGCGCTCCTTCAAGATGGCAGACCTTGGTCTCACT...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAACACCATCTCAGCCATaGGCACCTCCTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLTPSQP*APPCCG
Trigger: TCCACAACAAGGAGGTGCGCATGGCTGAGATGGTGT...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCACACCATCTCAGCCATaGGCACCTCCTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLTPSQP*APPCCG
Trigger: TCCACAACAAGGAGGTGCGCATGGCTGAGATGGTGT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTGCTGACCTGGCACCCTaGGCACAGCAGGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGADLAP*AQQADS
Trigger: TGAATCTGCCTGCTGTGCCCAGGGTGCCAGGTCAGC...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCCTGAAGACAGTCGAGTaGGACTCAGTGGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSLKTVE*DSVGNA
Trigger: TGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAG...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTGAAGACAGTCGAGTaGGACTCAGTGGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTALKTVE*DSVGNA
Trigger: TGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACTGAAGACAGTCGAGTaGGACTCAGTGGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLLKTVE*DSVGNA
Trigger: TGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCCTTAACGTGCATCTaGGAAGCAGGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGSLTCI*EAGSSS
Trigger: AGAGGAGGAACCTGCTTCCCAGATGCACGTTAAGGA...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCGTAACTGGAATTTCCTaGACAAGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVVTGIS*TRGCPV
Trigger: TACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTTAC...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGTAACTGGAATTTCCTaGACAAGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSVTGIS*TRGCPV
Trigger: TACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTTAC...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGTACCAACCCTACCCCTaGGGTGTCACTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQYQPYP*GVTLTL
Trigger: CAGGGTGAGAGTGACACCCCAGGGGTAGGGTTGGTA...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGAGGTGGCCATACCACTaGCCAGCAGCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQRWPYH*PAAPNR
Trigger: TCTGTTGGGAGCTGCTGGCCAGTGGTATGGCCACCT...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGCTGCTTCTTGTAGTTaGCTGAGCCCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVAASCS*LSPEKR
Trigger: CCTCTTCTCTGGGCTCAGCCAACTACAAGAAGCAGC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGCACAAGCTGCCTaGCAGTTCTGTAGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSERAQAA*QFCSRA
Trigger: AGCTCTACTACAGAACTGCCAGGCAGCTTGTGCCCT...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCCTTCACACTTTCGATaGCCCCCTGGAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEPSHFR*PPGAGH
Trigger: GTGCCCTGCTCCAGGGGGCCATCGAAAGTGTGAAGG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAAAAGAGCCTTGGGCCTaGAGCAGCATGTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSKEPWA*SSMSSE
Trigger: CTCGCTGGACATGCTGCTCCAGGCCCAAGGCTCTTT...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSGAAGC*IYCSSS
Trigger: ACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAAGAGGCAATGTTCCTTaGAGCTGCAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: EPIQALQPDFPREAPCQLRGNVP*SCRLLD
Trigger: ATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCT...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LGFKARHWGSAARSPPVFCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTTTCTTAACCCACAACTaGGATGGGAGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSFLTHN*DGSWGQ
Trigger: CTGTCCCCAGCTCCCATCCCAGTTGTGGGTTAAGAA...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCACCAGCCTACAGCATaGAAACACCCAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVHQPTA*KHPMSA
Trigger: AGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACACACCAGCCTACAGCATaGAAACACCCAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTHQPTA*KHPMSA
Trigger: AGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTG...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACCAGCCTACAGCATaGAAACACCCAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALQPDFPREAPCQLVQWPHQPTA*KHPMSA
Trigger: AGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTG...TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTTCTTCCTGAGGGGTaGGGGCACCCTAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEVLPEG*GHPSHC
Trigger: GCAGTGACTAGGGTGCCCCCACCCCTCAGGAAGAAC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGGAAGGGAAATGACTTaGGTCTGCCTTGGACCACCT +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVGREMT*VCLGPP
Trigger: AGGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCC...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
3UTR CAA 72 bp AGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCC +
Preference number: 4 (lower is better)
Translates to: SVWTNSRACIRW*LCRVSWCSNPS
Trigger: GGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTGCAGTCAGGGAATCCTaGACTGATGAAAGCTACCCA +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAAVRES*TDESYP
Trigger: TGGGTAGCTTTCATCAGTTCAGGATTCCCTGACTGC...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTTGCTGCTTGTCCTTaGAGAAGGTGTGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLLAACP*RRCAHS
Trigger: GCTATGGGCACACCTTCTTCAAGGACAAGCAGCAAG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACTTGCTGCTTGTCCTTaGAGAAGGTGTGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQLAACP*RRCAHS
Trigger: GCTATGGGCACACCTTCTTCAAGGACAAGCAGCAAG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCATGGCGAGGCTTGCTaGAGAGCAGCAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEHGEAC*RAAAPQ
Trigger: TTGAGGAGCTGCTGCTCTTCAGCAAGCCTCGCCATG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCATCCCACAGCACTCAGTaGGACCAAGGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSSHSTQ*DQGLPS
Trigger: AGATGGCAGACCTTGGTCTCACTGAGTGCTGTGGGA...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGCTGAG*GTPEQS
Trigger: GCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTGTACAGGTGCAGGTTaGGGGACCCCAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLECTGAG*GTPEQS
Trigger: GCTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR TCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTTTGGGACGAGATCTCTaGGTCCTCAGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSLGRDL*VLSSQR
Trigger: TCTTTGACTGCTGAGGACTCAGAGATCTCGTCCCAA...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCCTAGACTCCTTCTCTaGGACACCAAAGGCCTAACA +
Preference number: 4 (lower is better)
Translates to: ADPERQCSLELQAAGSTAPRLLL*DTKGLT
Trigger: TGTTAGGCCTTTGGTGTCTCAGAGAAGGAGTCTAGG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCCTAGACTCCTTCTCTaGGACACCAAAGGCCTAACA +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSPRLLL*DTKGLT
Trigger: TGTTAGGCCTTTGGTGTCTCAGAGAAGGAGTCTAGG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATCCTGTCGCACCAGCTGCCCCTGTTCCTTGAGGTTAACATCACAGCCCTGGATAGACCTCCAAAGTCTTaGCACTCATCTCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ILSHQLPLFLEVNITALDRPPKS*HSSLQA
Trigger: TGCCTGGAGAGATGAGTGTCAAGACTTTGGAGGTCT...ATCCAGGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCTGGTGCGACAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTCACTCTCACCCTGTaGCAAGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEVTLTL*QAEVGG
Trigger: TCCTCCCACCTCAGCTTGGCACAGGGTGAGAGTGAC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCACTTCCTTCAGCAGCGTaGTTCCCACTAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSLPSAA*FPLAAP
Trigger: AGGTGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAG...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGAGTCTAGCACCTGCTaGATCAGGACCTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQESSTC*IRTSVC
Trigger: GCAGACAGAGGTCCTGATGCAGCAGGTGCTAGACTC...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGGCGAGTCTAGCACCTaGTGCATCAGGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEGESST*CIRTSV
Trigger: GACAGAGGTCCTGATGCAGCAGGTGCTAGACTCGCC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGGTTCACTGAGACTCTaGCCCAGATTCCGATCGAAG +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQGSLRL*PRFRSK
Trigger: CTTCGATCGGAATCTGGGGCAGAGTCTCAGTGAACC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCACAGGTGGTCCCCCAGTaGTTGCTGCTTGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSQVVPQ*LLLVLE
Trigger: TTCAAGGACAAGCAGCAAGCACTGGGGGACCACCTG...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGTGCGTACTTGCCCATaGGCTGGATGGGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSVRTCP*AGWALA
Trigger: TGCTAAAGCCCATCCAGCGCATGGGCAAGTACGCAC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGTGAGACCAAGGTCTaGCATCTTGAAGGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSSETKV*HLEGAL
Trigger: AAGCGCTCCTTCAAGATGGCAGACCTTGGTCTCACT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp TCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGAGTGAGACCAAGGTCTaGCATCTTGAAGGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: SAGSVGAAIHPPGHIARQSETKV*HLEGAL
Trigger: AAGCGCTCCTTCAAGATGGCAGACCTTGGTCTCACT...CTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTCAGCTGTCCAGGCCTaGTTGATAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLESAVQA*LIARLE
Trigger: CTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTCAGCTGTCCAGGCCTaGTTGATAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGSAVQA*LIARLE
Trigger: CTCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSENVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LVTADPERQCSLELQAAGGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCCTAGAGAGGCCCCGTaGCAGTTAGTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGPREAP*QLVQWP
Trigger: TGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGAAATGACTTGGGTCTaGCTTGGACCACCTATCCAG +
Preference number: 4 (lower is better)
Translates to: VTADPERQCSLELQAAGSEMTWV*LGPPIQ
Trigger: CTGGATAGGTGGTCCAAGGCAGACCCAAGTCATTTC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp TCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTCATATAGCTCGTCAGAAGTCATTTTTCTCCTaGGGTTGCCGTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SAGSVGAAIHPPGHIARQKSFFS*GCREDW
Trigger: CCAGTCCTCACGGCAACCCCAGGAGAAAAATGACTT...CTGACGAGCTATATGACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGACTGCAATTCAGGCCTaGGAAGAGGGAATAACGTTA +
Preference number: 4 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWTAIQA*EEGITL
Trigger: TAACGTTATTCCCTCTTCCCAGGCCTGAATTGCAGT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAACTGAAGACAGTCGAGTaGGACTCAGTGGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQLKTVE*DSVGNA
Trigger: TGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAG...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTCCTTAACGTGCATCTaGGAAGCAGGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLSLTCI*EAGSSS
Trigger: AGAGGAGGAACCTGCTTCCCAGATGCACGTTAAGGA...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTCCTTAACGTGCATCTaGGAAGCAGGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYSLTCI*EAGSSS
Trigger: AGAGGAGGAACCTGCTTCCCAGATGCACGTTAAGGA...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGTAACTGGAATTTCCTaGACAAGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSVTGIS*TRGCPV
Trigger: TACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTTAC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAGTAACTGGAATTTCCTaGACAAGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEVTGIS*TRGCPV
Trigger: TACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTTAC...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTACCAACCCTACCCCTaGGGTGTCACTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEYQPYP*GVTLTL
Trigger: CAGGGTGAGAGTGACACCCCAGGGGTAGGGTTGGTA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp AAGAACTTGGAGCACAAATTCGGGCATCAACTAGCACTGTCAGTCCCAGTGCCTTCCCAACAGAGGTCTTaGGCCAGGAGGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KNLEHKFGHQLALSVPVPSQQRS*ARRQSA
Trigger: TGCTGACTGCCTCCTGGCCCAAGACCTCTGTTGGGA...AGGCACTGGGACTGACAGTGCTAGTTGATGCCCGAATTTGTGCTCCAAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGACATCCCGAGTCCCTaGCAAGGTGGCCATACCACT +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEDIPSP*QGGHTT
Trigger: AGTGGTATGGCCACCTTGCCAGGGACTCGGGATGTC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCCTGTACTTCGGGCCTaGGGATGCTTCGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEPVLRA*GCFAGT
Trigger: TGTACCTGCGAAGCATCCCCAGGCCCGAAGTACAGG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACAGAAGAGGGAAGAACTTaGAGCACAAATTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: QPDFPREAPCQLVQWPHTEEGRT*STNSGI
Trigger: GATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTC...TGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGCTGCTTCTTGTAGTTaGCTGAGCCCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYAASCS*LSPEKR
Trigger: CCTCTTCTCTGGGCTCAGCCAACTACAAGAAGCAGC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCGGGCCTCCAGTGTTTaGACCAACTCTAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGRASSV*TNSRAC
Trigger: ACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAAGCCACACTTCAATCTaGTGCAGTCCGCTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSSHTSI*CSPLSR
Trigger: CCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCT...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGAGGAAGAAGTGGCAGTaGAAGTCCCGCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQRKKWQ*KSRSFS
Trigger: GGAGAAGCTGCGGGACTTCCACTGCCACTTCTTCCT...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGTGTCAGCCACACCCTaGTCACAGCAGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSVSATP*SQQIQR
Trigger: TCTCTGGATCTGCTGTGACCAGGGTGTGGCTGACAC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCAGGAGAAGGGGTCATaGGGCCAGGAGCCTATTCAG +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGQEKGS*GQEPIQ
Trigger: CTGAATAGGCTCCTGGCCCCATGACCCCTTCTCCTG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCCACCAGCCTACAGCATaGAAACACCCAATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLHQPTA*KHPMSA
Trigger: AGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTG...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGGTAGCTGTGCGATTTaGGGTCCCTTTAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSGSCAI*GPFRAC
Trigger: ACATGCCCTAAAGGGACCTCAAATCGCACAGCTACC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTCCCACAGCACTCAGTaGGACCAAGGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGSHSTQ*DQGLPS
Trigger: AGATGGCAGACCTTGGTCTCACTGAGTGCTGTGGGA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAAGACCTCCAAAGTCTTaGCACTCATCTCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLRPPKS*HSSLQA
Trigger: TGCCTGGAGAGATGAGTGTCAAGACTTTGGAGGTCT...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCCAGGGCACAGGAACTaGAATTCAGGCCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEPGHRN*NSGLGR
Trigger: TCTTCCCAGGCCTGAATTGCAGTTCCTGTGCCCTGG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTACCTCTGGGACCTCTTaGTTCAGCCATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGTSGTS*FSHVSS
Trigger: GGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGT...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGACCTCTGGGACCTCTTaGTTCAGCCATGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLETSGTS*FSHVSS
Trigger: GGAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGT...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTG +
Preference number: 4 (lower is better)
Translates to: IQALQPDFPREAPCQLVQNVPWS*RLLDLL
Trigger: CAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATT...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp CCAAAGCAGGTGGGAGATGTCAGCTGTCCAGGCCTGCTTGATAGCCAGGCTGGAGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACC +
Preference number: 4 (lower is better)
Translates to: PKQVGDVSCPGLLDSQAGETPNV*SSLFLT
Trigger: GGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTC...TCCAGCCTGGCTATCAAGCAGGCCTGGACAGCTGACATCTCCCACCTGCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTAACCAGAGTCACAAATaGAGACAGATTCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPNQSHK*RQIQRL
Trigger: GAGTCTCTGAATCTGTCTCCATTTGTGACTCTGGTT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACACTCCCCAGAATTTGTaGGAAGATTGTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYTPQNL*EDCGKV
Trigger: GACCTTCCCACAATCTTCCCACAAATTCTGGGGAGT...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGCTGAAGACAGTCGAGTaGGACTCAGTGGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQLKTVE*DSVGNA
Trigger: TGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAG...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGTGGTCTTGGAGGACCTaGGTCCTTAACGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQWSWRT*VLNVHL
Trigger: CAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCA...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGTAACTGGAATTTCCTaGACAAGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLVTGIS*TRGCPV
Trigger: TACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTTAC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAAGAGGGAAGAACTTaGAGCACAAATTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLEEGRT*STNSGI
Trigger: GATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTC...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGAAGAGGGAAGAACTTaGAGCACAAATTCGGGCATC +
Preference number: 4 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYEEGRT*STNSGI
Trigger: GATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: APCQLVQWPHTSERVVNSCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTATGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PREAPCQLVQWPHTSERVCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCTGCCAGTTAGTCCAATaGCCACACACATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVCQLVQ*PHTSER
Trigger: CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCA...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCATTCTTAACCCACAACTaGGATGGGAGCTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSFLTHN*DGSWGQ
Trigger: CTGTCCCCAGCTCCCATCCCAGTTGTGGGTTAAGAA...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCATTTAAGGCCAGGCATTaGGGATCAGCTGCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSFKARH*GSAARS
Trigger: GCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAA...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGCTGGCACAGAATAAATaGTTTGGGGCGCCTGACACT +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQLAQNK*FGAPDT
Trigger: AGTGTCAGGCGCCCCAAAGCATTTATTCTGTGCCAG...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAAGCGAGGCTTATTCTTaGTGTAGAGCGCGTACATCC +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSSEAYS*CRARTS
Trigger: GGATGTACGCGCTCTACAGCAAGAATAAGCCTCGCT...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTCCCCCAGTGCTTGCTaGTTGTCCTTGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLESPSAC*LSLKKV
Trigger: CACCTTCTTCAAGGACAAGCAGCAAGCACTGGGGGA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGAGTGAGACCAAGGTCTaGCATCTTGAAGGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQSETKV*HLEGAL
Trigger: AAGCGCTCCTTCAAGATGGCAGACCTTGGTCTCACT...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCATCTATGTATCCCATaGAAACCAGAGTCACAAATG +
Preference number: 4 (lower is better)
Translates to: TELGFKARHWGSAARSPPHLCIP*KPESQM
Trigger: CATTTGTGACTCTGGTTTCCATGGGATACATAGATG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATACTCCCCAGAATTTGTaGGAAGATTGTGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYTPQNL*EDCGKV
Trigger: GACCTTCCCACAATCTTCCCACAAATTCTGGGGAGT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CCA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTACTGCAATTCAGGCCTaGGAAGAGGGAATAACGTTA +
Preference number: 4 (lower is better)
Translates to: PVPMVTELGFKARHWGSATAIQA*EEGITL
Trigger: TAACGTTATTCCCTCTTCCCAGGCCTGAATTGCAGT...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCATCCTTAACGTGCATCTaGGAAGCAGGTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSSLTCI*EAGSSS
Trigger: AGAGGAGGAACCTGCTTCCCAGATGCACGTTAAGGA...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTGGTCTTGGAGGACCTaGGTCCTTAACGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEWSWRT*VLNVHL
Trigger: CAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTAACTGGAATTTCCTaGACAAGGGGCTGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQVTGIS*TRGCPV
Trigger: TACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTTAC...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTGCTGCTTCTTGTAGTTaGCTGAGCCCAGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGAASCS*LSPEKR
Trigger: CCTCTTCTCTGGGCTCAGCCAACTACAAGAAGCAGC...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTTGGGACGAGATCTCTaGGTCCTCAGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGLGRDL*VLSSQR
Trigger: TCTTTGACTGCTGAGGACTCAGAGATCTCGTCCCAA...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR TCA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGTTGGGACGAGATCTCTaGGTCCTCAGCAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: MATHIRKGSQQRCTCRLELGRDL*VLSSQR
Trigger: TCTTTGACTGCTGAGGACTCAGAGATCTCGTCCCAA...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR GCA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACC +
Preference number: 4 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLETPNV*SSLFLT
Trigger: GGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTC...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp AAGAACTTGGAGCACAAATTCGGGCATCAACTAGCACTGTCAGTCCCAGTGCCTTTACAACAGGCACAGTaGGACCAACAGCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: KNLEHKFGHQLALSVPVPLQQAQ*DQQQSP
Trigger: GGGAGATTGCTGTTGGTCCCACTGTGCCTGTTGTAA...AGGCACTGGGACTGACAGTGCTAGTTGATGCCCGAATTTGTGCTCCAAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTAAGTCATTTTTCTCCTaGGGTTGCCGTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGKSFFS*GCREDW
Trigger: CCAGTCCTCACGGCAACCCCAGGAGAAAAATGACTT...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTGGTAGTCAACAGCGTTaGACATGTAGGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGGSQQR*TCRLEV
Trigger: TACCTCCAACCTACATGTGCAACGCTGTTGACTACC...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR GCA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACC +
Preference number: 4 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLETPNV*SSLFLT
Trigger: GGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CCA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAACATCTATGTATCCCATaGAAACCAGAGTCACAAATG +
Preference number: 4 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEHLCIP*KPESQM
Trigger: CATTTGTGACTCTGGTTTCCATGGGATACATAGATG...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR GCA 90 bp AGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGAAACACCCAATGTCTaGTCTAGCCTATTCTTAACC +
Preference number: 4 (lower is better)
Translates to: RKGSQQRCTCRLEVAQVSETPNV*SSLFLT
Trigger: GGTTAAGAATAGGCTAGAGCAGACATTGGGTGTTTC...TGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS GCA 90 bp CGACGGGGCACAGCCCTGCCGGCGCGGAAGACAAGGTGCGGGCCCTaGAGCAACCCCCGCCCGCCGCCGTCCTCTCCGTGGGCCCGGACA +
Preference number: 5 (lower is better)
Translates to: RRGTALPARKTRCGP*SNPRPPPSSPWART
Trigger: TGTCCGGGCCCACGGAGAGGACGGCGGCGGGCGGGGGTTGCTGCAGGGCCCGCACCTTGTCTTCCGCGCCGGCAGGGCTGTGCCCCGTCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp CCGGGCCCCGCAGACCGCGCGCCTCACCCGCGGCGTCGCAGTGCGTaGGTTGGGGCAGCGACCAACGGTCGGCAGCTCCACCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: PGPADRAPHPRRRSA*VGAATNGRQLHRAH
Trigger: GTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGTGAGGCGCGCGGTCTGCGGGGCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp CCCCGCAGACCGCGCGCCTCACCCGCGGCGTCGCAGTGCGTGGGTTaGGGCAGCGACCAACGGTCGGCAGCTCCACCGTGCCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: PRRPRASPAASQCVG*GSDQRSAAPPCPLP
Trigger: GGGGAGTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGTGAGGCGCGCGGTCTGCGGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 90 bp GCGCGCCCACCCTCAGCGTCCTCACGGCCACGCTCTGCAGGCCCATaGCCGTGGGGGCGGCCCCGCCATGGCACCACGATGCCTCGGGTT +
Preference number: 5 (lower is better)
Translates to: ARPPSASSRPRSAGP*PWGRPRHGTTMPRV
Trigger: AACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGTGGGCGCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS GCA 90 bp CCTCTGTCCAGGTCCCCCGTCGGACGCCCGTGGGCCTCTGCTCCGTaGGCGCCCACCCTCAGCGTCCTCACGGCCACGCTCTGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PLSRSPVGRPWASAP*APTLSVLTATLCRP
Trigger: GGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGTGGGCGCGCACGGAGCAGAGGCCCACGGGCGTCCGACGGGGGACCTGGACAGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS CCA 90 bp CAGCGACCAACGGTCGGCAGCTCCACCGTGCCCACTCCCCGGGCCTaGCGAGGACGCCGGAAGCGCTCTCCCGCCAGGAAGGCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: QRPTVGSSTVPTPRA*RGRRKRSPARKAAW
Trigger: CCACGCGGCCTTCCTGGCGGGAGAGCGCTTCCGGCGTCCTCGCCAGGCCCGGGGAGTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000562744.1
ENST00000563969.5
CDS GCA 90 bp CAGTGCGTGGGTTGGGGCAGCGACCAACGGTCGGCAGCTCCACCGTaGCCACTCCCCGGGCCTGGCGAGGACGCCGGAAGCGCTCTCCCG +
Preference number: 5 (lower is better)
Translates to: QCVGWGSDQRSAAPP*PLPGPGEDAGSALP
Trigger: CGGGAGAGCGCTTCCGGCGTCCTCGCCAGGCCCGGGGAGTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000562744.1
ENST00000563969.5
CDS GCA 90 bp GAGGACGGAGCCACAGCCCGAGCAGGTCTCGACGGGGCACAGCCCTaGCGGCGCGGAAGACAAGGTGCGGGCCCTGCAGCAACCCCCGCC +
Preference number: 5 (lower is better)
Translates to: EDGATARAGLDGAQP*RRGRQGAGPAATPA
Trigger: GGCGGGGGTTGCTGCAGGGCCCGCACCTTGTCTTCCGCGCCGGCAGGGCTGTGCCCCGTCGAGACCTGCTCGGGCTGTGGCTCCGTCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 90 bp TCTGCTCCGTGCGCGCCCACCCTCAGCGTCCTCACGGCCACGCTCTaGAGGCCCATGCCCGTGGGGGCGGCCCCGCCATGGCACCACGAT +
Preference number: 5 (lower is better)
Translates to: SAPCAPTLSVLTATL*RPMPVGAAPPWHHD
Trigger: ATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGTGGGCGCGCACGGAGCAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS GCA 90 bp GGGTGTCCCTCTGTCCAGGTCCCCCGTCGGACGCCCGTGGGCCTCTaGTCCGTGCGCGCCCACCCTCAGCGTCCTCACGGCCACGCTCTG +
Preference number: 5 (lower is better)
Translates to: GCPSVQVPRRTPVGL*SVRAHPQRPHGHAL
Trigger: CAGAGCGTGGCCGTGAGGACGCTGAGGGTGGGCGCGCACGGAGCAGAGGCCCACGGGCGTCCGACGGGGGACCTGGACAGAGGGACACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS CCA 90 bp CCACCCTCAGCGTCCTCACGGCCACGCTCTGCAGGCCCATGCCCGTaGGGGCGGCCCCGCCATGGCACCACGATGCCTCGGGTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: PPSASSRPRSAGPCP*GRPRHGTTMPRVRS
Trigger: AGAGCGAACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS CCA 90 bp AGGCCCTCAGCGTCCTCACGGCCACGCTCTGCAGGCCCATGCCCGTaGGGGCGGCCCCGCCATGGCACCACGATGCCTCGGGTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: RPSASSRPRSAGPCP*GRPRHGTTMPRVRS
Trigger: AGAGCGAACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568621.1
CDS GCA 90 bp CAATTCAGGCCCTCAGCGTCCTCACGGCCACGCTCTGCAGGCCCATaGCCGTGGGGGCGGCCCCGCCATGGCACCACGATGCCTCGGGTT +
Preference number: 5 (lower is better)
Translates to: QFRPSASSRPRSAGP*PWGRPRHGTTMPRV
Trigger: AACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGCCTGAATTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568621.1
CDS TCA 90 bp GAAGCGGGGTGCTGCCTCGCCGCGGGCACCCAGAGACAGGTCGCATaGTCCCACGTGGGATGGGGCTGCCATCCGGGTGGGAGTGAGACC +
Preference number: 5 (lower is better)
Translates to: EAGCCLAAGTQRQVA*SHVGWGCHPGGSET
Trigger: GGTCTCACTCCCACCCGGATGGCAGCCCCATCCCACGTGGGATCATGCGACCTGTCTCTGGGTGCCCGCGGCGAGGCAGCACCCCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp GCACAGGAACTGCAATTCAGGCCCGCGGCGTCGCAGTGCGTGGGTTaGGGCAGCGACCAACGGTCGGCAGCTCCACCGTGCCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: AQELQFRPAASQCVG*GSDQRSAAPPCPLP
Trigger: GGGGAGTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGCCTGAATTGCAGTTCCTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562744.1
CDS TCA 90 bp AGGAACTGCAATTCAGGCGCCCCCGGGCCGAGCCGCGGGGAACCGTaGAGTCGGACAGCCTTCGAACAGACGGCGGCCTCGACGGCCACT +
Preference number: 5 (lower is better)
Translates to: RNCNSGAPGPSRGEP*SRTAFEQTAASTAT
Trigger: AGTGGCCGTCGAGGCCGCCGTCTGTTCGAAGGCTGTCCGACTTCACGGTTCCCCGCGGCTCGGCCCGGGGGCGCCTGAATTGCAGTTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379344.8
CDS GCA 90 bp ACAGGAACTGCAATTCAGGCCCTCAGCGTCCTCACGGCCACGCTCTaGAGGCCCATGCCCGTGGGGGCGGCCCCGCCATGGCACCACGAT +
Preference number: 5 (lower is better)
Translates to: TGTAIQALSVLTATL*RPMPVGAAPPWHHD
Trigger: ATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGCCTGAATTGCAGTTCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568621.1
CDS-3UTR CAA 90 bp GGCAGTAAGGCAGGCCTCCTCCTAGCGAAGTGGGCAGCCCCGCCGTTGGGATGTATGCGGCGCACGGACTaGTGGCGCCCAGTGCGCACC +
Preference number: 5 (lower is better)
Translates to: GSKAGLLLAKWAAPPLGCMRRTD*WRPVRT
Trigger: GGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCAT...ACATCCCAACGGCGGGGCTGCCCACTTCGCTAGGAGGAGGCCTGCCTTACTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCAAGGTGTCCCTGGCCTaGCGGCGGCGGAACCAGATC +
Preference number: 5 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPAKVSLA*RRRNQI
Trigger: GATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTT...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCCCCAGGCCCTGGCCTaGTTGCAGGGCCTACCGCGC +
Preference number: 5 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGPQALA*LQGLPR
Trigger: GCGCGGTAGGCCCTGCAACAAGGCCAGGGCCTGGGG...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS TCA 90 bp AGGTGGGCCTGCTCGGGGCCAGCGGGAGAGGGCTGGGTCTCAGTGTaGACCGCGCTGAAGACAGTCGAGTGGGACTCAGTGGGCAATGCA +
Preference number: 5 (lower is better)
Translates to: RWACSGPAGEGWVSV*TALKTVEWDSVGNA
Trigger: TGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAGCGCGGTTCACACTGAGACCCAGCCCTCTCCCGCTGGCCCCGAGCAGGCCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000562744.1
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
ENST00000568621.1
CDS-3UTR CAA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGACCCCAGGCCCTGGCCTaGTTGCAGGGCCTACCGCGC +
Preference number: 5 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGPQALA*LQGLPR
Trigger: GCGCGGTAGGCCCTGCAACAAGGCCAGGGCCTGGGG...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCTTGACGGTGCGGTCGTaGATGGCTTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPALTVRS*MASSLG
Trigger: TCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAA...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS GCA 90 bp CTCAGACTGAAGCCAGGCTGGGCTGTGGGCACACAGAAGCAGCACTaGCCGGCCTTGGACATCCCGAGTCCCCTGTGCCAAGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LRLKPGWAVGTQKQH*PALDIPSPLCQAEV
Trigger: CACCTCAGCTTGGCACAGGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGTGCCCACAGCCCAGCCTGGCTTCAGTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450733.5
CDS-3UTR CAA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGTGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLWAAPP*GCGSAG
Trigger: GCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCA...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAATGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEWAAPP*GCGSAG
Trigger: GCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCA...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGTCCCGGGCTCAGACACAGGGTAAGTCCTCCAGGCCCCTACCCAGGGCCTGCCCACCTCTGGGACCTCTaGCTTCAGCCATGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SPGLRHRVSPPGPYPGPAHLWDL*LQPCQL
Trigger: GAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGTG...GGCAGGCCCTGGGTAGGGGCCTGGAGGACTTACCCTGTGTCTGAGCCCGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAATGCGGCGCACGGACTaGTGGCGCCCAGTGCGCACC +
Preference number: 5 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEMRRTD*WRPVRT
Trigger: GGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCAT...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGCCATGCGCACCTCCTaGTTGTGGACGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMAMRTS*LWTACL
Trigger: GAGGCAGGCCGTCCACAACAAGGAGGTGCGCATGGC...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS GCA 90 bp CACAGGAACTGCAATTCAGGCCTGCTGGGGGCGCTCCAGGAACTCTaGTCTTTGAGCCTCACCCTCCTCACCTGGCACCCTGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: HRNCNSGLLGALQEL*SLSLTLLTWHPGHS
Trigger: GCTGTGCCCAGGGTGCCAGGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCTGGAGCGCCCCCAGCAGGCCTGAATTGCAGTTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562144.5
CDS-3UTR CAA 90 bp CCGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGAGATCCTCTACCCCTTaGCCATCCCTGGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: PLAPLGQSPREFSQLGSQRSSTP*PSLAPP
Trigger: AGGGGGTGCCAGGGATGGCAAAGGGGTAGAGGATCT...CTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGTCGCAGTGCGTGGGTaGGGGCAGCGACCAACGGTC +
Preference number: 5 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGVAVRG*GQRPTV
Trigger: GACCGTTGGTCGCTGCCCCAACCCACGCACTGCGAC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCCCCAGGCCCTGGCCTaGTTGCAGGGCCTACCGCGC +
Preference number: 5 (lower is better)
Translates to: VTADPERQCSLELQAAGSPQALA*LQGLPR
Trigger: GCGCGGTAGGCCCTGCAACAAGGCCAGGGCCTGGGG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCATACCCGTCAGCCTTGTCCATaGCCGTCCTGTAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: KQHCPALDIPSPWQGGHTRQPCP*PSCSLG
Trigger: GCCCAGACTACAGGACGGCAATGGACAAGGCTGACG...GGTATGGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CAA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCATGCGGCGCACGGACTaGTGGCGCCCAGTGCGCACC +
Preference number: 5 (lower is better)
Translates to: HMVPHQPTAWKHPMSALAMRRTD*WRPVRT
Trigger: GGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCAT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACAGAAGCAGCACTGCCCGGCCTTGGACATCCCGAGTCCCTGGCAAGGTGGCCCTGTACAGGTGCAGGTaGAGGGACCCCAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: HRSSTARPWTSRVPGKVALYRCR*RDPRTE
Trigger: CTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAG...GGCCACCTTGCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS GCA 90 bp GCCGTGAGGACTGGGGAAGACTCCCTGTGTTATACGTTCACCCGCTaGCAGCACTCGGGCTGTGTTGGTGCCCTGCCCCCTCATTTCACC +
Preference number: 5 (lower is better)
Translates to: AVRTGEDSLCYTFTR*QHSGCVGALPPHFT
Trigger: GGTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATAACACAGGGAGTCTTCCCCAGTCCTCACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 90 bp AGTGTGAACCGCGCTGAAGACAGTCGAGTGGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCCGCAGGAGGTGCCAGTCTTAGTGCC +
Preference number: 5 (lower is better)
Translates to: SVNRAEDSRVGLSGQ*RRRAWAAGGASLSA
Trigger: GGCACTAAGACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAGCGCGGTTCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000562744.1
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
ENST00000568621.1
CDS GCA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTCAGACTCAAAGAGGGCTGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: SREAMFLGAAGCWIY*SSSPGLRLKEGWPP
Trigger: GGGCGGCCAGCCCTCTTTGAGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569875.5
CDS CCA 90 bp GAAGACAGTCGAGTGGGACTCAGTGGGCAATGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGTCTTAGTGCCAGGGCACAGGAACTG +
Preference number: 5 (lower is better)
Translates to: EDSRVGLSGQCRRRA*AAGGASLSARAQEL
Trigger: CAGTTCCTGTGCCCTGGCACTAAGACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGACTGTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000562744.1
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
ENST00000568621.1
CDS-3UTR CAA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGTGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: FPREAPCQLVQWPHTSERWAAPP*GCGSAG
Trigger: GCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCA...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCGTCAGCCTTGTCCATaGCCGTCCTGTAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMRQPCP*PSCSLG
Trigger: GCCCAGACTACAGGACGGCAATGGACAAGGCTGACG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCGCTGGCACCGCTGGGCCAAAGCCCTAGAGAATTCAGTCAGCTGGGCTCGCAGGCTCTGCAGGGTCAGTaGGTGCAGCAATCCATCCAC +
Preference number: 5 (lower is better)
Translates to: PLAPLGQSPREFSQLGSQALQGQ*VQQSIH
Trigger: GTGGATGGATTGCTGCACCAACTGACCCTGCAGAGC...CTGCGAGCCCAGCTGACTGAATTCTCTAGGGCTTTGGCCCAGCGGTGCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CAA 90 bp TTCCCACTAGCAGCACCTGGTACACGGCCCCTGGGGCTGCTTCTTGTAGTTGGCCGCAGCTTCTCCAGGTaGCCAAAGAGGTGGGCACGC +
Preference number: 5 (lower is better)
Translates to: FPLAAPGTRPLGLLLVVGRSFSR*PKRWAR
Trigger: GCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCG...GCCAACTACAAGAAGCAGCCCCAGGGGCCGTGTACCAGGTGCTGCTAGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTATGCGGCGCACGGACTaGTGGCGCCCAGTGCGCACC +
Preference number: 5 (lower is better)
Translates to: ADPERQCSLELQAAGSTAMRRTD*WRPVRT
Trigger: GGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCAT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCATGCGGCGCACGGACTaGTGGCGCCCAGTGCGCACC +
Preference number: 5 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLMRRTD*WRPVRT
Trigger: GGTGCGCACTGGGCGCCACAAGTCCGTGCGCCGCAT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCAAGGTGTCCCTGGCCTaGCGGCGGCGGAACCAGATC +
Preference number: 5 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGKVSLA*RRRNQI
Trigger: GATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTT...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCAAGGTGTCCCTGGCCTaGCGGCGGCGGAACCAGATC +
Preference number: 5 (lower is better)
Translates to: LGFKARHWGSAARSPPVFKVSLA*RRRNQI
Trigger: GATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAAAGGTGTCCCTGGCCTaGCGGCGGCGGAACCAGATC +
Preference number: 5 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEKVSLA*RRRNQI
Trigger: GATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTT...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TCTCTGAGTCCTCAGCAGTCAAAGAGGGCTGGCCGCCCAGCTCTGCCTCAGCCTATGCGCACCTCCTTGTaGTGGACGGCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: SLSPQQSKRAGRPALPQPMRTSL*WTACLQ
Trigger: TTGGAGGCAGGCCGTCCACAACAAGGAGGTGCGCAT...AGGCTGAGGCAGAGCTGGGCGGCCAGCCCTCTTTGACTGCTGAGGACTCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGCCATGCGCACCTCCTaGTTGTGGACGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGAMRTS*LWTACL
Trigger: GAGGCAGGCCGTCCACAACAAGGAGGTGCGCATGGC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCCAGCACTGCCCGGCCTaGGACATCCCGAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSQHCPA*DIPSPL
Trigger: CAGGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTG...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450733.5
CDS GCA 90 bp TGGGTGGCCCCGGCTGGTGGTCTTGGAGGACCTGGGTCCTTAACGTaGATCTGGGAAGCAGGTTCCTCCTCTTCCCAGGCATCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: WVAPAGGLGGPGSLT*IWEAGSSSSQASLK
Trigger: TTTCAGGGATGCCTGGGAAGAGGAGGAACCTGCTTCCCAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
CDS CCA 90 bp AACTGGAATTTCCTGGACAAGGGGCTGCCCTGTAGCTCCTCATCCTaGGTGGCCCCGGCTGGTGGTCTTGGAGGACCTGGGTCCTTAACG +
Preference number: 5 (lower is better)
Translates to: NWNFLDKGLPCSSSS*VAPAGGLGGPGSLT
Trigger: CGTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
CDS CCA 90 bp CCTCGCTGGGAGCAATGTCTCGGAAGGCCTTGTTCCCCACACCCATaGACACCATCTCAGCCATGCGCACCTCTGGGTGGAGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: PRWEQCLGRPCSPHP*TPSQPCAPLGGEWT
Trigger: TGTCCACTCTCCACCCAGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACATTGCTCCCAGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562289.1
CDS-3UTR CAA 90 bp CAACAGAGGTCTTGGGCCAGGAGGCAGTCAGCAGGCTTAGGGAGGCCGGATCCACAGGAACTCTGCTCTTaGAGCCTCACCCTCCTCACC +
Preference number: 5 (lower is better)
Translates to: QQRSWARRQSAGLGRPDPQELCS*SLTLLT
Trigger: GGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCTG...TGGATCCGGCCTCCCTAAGCCTGCTGACTGCCTCCTGGCCCAAGACCTCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATTGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYWAAPP*GCGSAG
Trigger: GCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCA...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGCTCTGCAGGGTCAGTTTGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: VFGPTLGPVFAGCSAGSVWAAPP*GCGSAG
Trigger: GCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCA...AACTGACCCTGCAGAGCAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CAA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGGCAGCCCCGCCGTaGGGATGTGGGTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: IQALQPDFPREAPCQLVQWAAPP*GCGSAG
Trigger: GCCTGCTGACCCACATCCCAACGGCGGGGCTGCCCA...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCGCAGCTTCTCCAGGTaGCCAAAGAGGTGGGCACGC +
Preference number: 5 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWRSFSR*PKRWAR
Trigger: GCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCAGGTGTGCCCATAGCTaGACATCAGGGCATCGGAGC +
Preference number: 5 (lower is better)
Translates to: GQQALRRQLLQLQPGRHFRCAHS*TSGHRS
Trigger: GCTCCGATGCCCTGATGTCAAGCTATGGGCACACCT...GAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCAGCAGCAGTGCGTACTaGCCCATGCGCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: LGFKARHWGSAARSPPVFSSSAY*PMRWMG
Trigger: GCCCATCCAGCGCATGGGCAAGTACGCACTGCTGCT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCTTGACGGTGCGGTCGTaGATGGCTTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ARSLFRLYNQTSLERPRALTVRS*MASSLG
Trigger: TCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAA...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGCTGTACAGGTGCAGGTaGAGGGACCCCAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMLYRCR*RDPRTE
Trigger: CTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAG...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACAGGGTGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SCRLLDLLLVQSRAQTQGERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...ACCCTGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS TCA 90 bp CCCCAGAGTCCAGACTTTCAGGCAGCTACCGAGGAGCCTTCTTCATaGGCAGGTCTGGCTGCCAGAGGGGAGCCTTGGAGTTGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PQSPDFQAATEEPSS*AGLAARGEPWSCPA
Trigger: AGCAGGACAACTCCAAGGCTCCCCTCTGGCAGCCAGACCTGCTCATGAAGAAGGCTCCTCGGTAGCTGCCTGAAAGTCTGGACTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS TCA 90 bp CTCTGCTCTTTGAGCCTCACCCTCCTCACCGAGGAGCCTTCTTCATaGGCAGGTCTGGCTGCCAGAGGGGAGCCTTGGAGTTGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LCSLSLTLLTEEPSS*AGLAARGEPWSCPA
Trigger: AGCAGGACAACTCCAAGGCTCCCCTCTGGCAGCCAGACCTGCTCATGAAGAAGGCTCCTCGGTGAGGAGGGTGAGGCTCAAAGAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565899.1
CDS GCA 90 bp CCTGTGTTATACGTTCACCCGCTGCCAGCACTCGGGCTGTGTTGGTaGCCTGCCCCCTCATTTCACCCGCAGTCAGGGAATCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: PVLYVHPLPALGLCW*PAPSFHPQSGNPEL
Trigger: CAGTTCAGGATTCCCTGACTGCGGGTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATAACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp CATGTGGGCCTGGCCCGACACTCCCCAGAATTTGTGGGAAGATTGTaGGAAGGTCAGCTCTGCGACCAGGAGAAGACCCTGAGCCCCACA +
Preference number: 5 (lower is better)
Translates to: HVGLARHSPEFVGRL*EGQLCDQEKTLSPT
Trigger: TGTGGGGCTCAGGGTCTTCTCCTGGTCGCAGAGCTGACCTTCCCACAATCTTCCCACAAATTCTGGGGAGTGTCGGGCCAGGCCCACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp CTCCCTGTGTTATACGTTCACCCGCTGCCAGCACTCGGGCTGTGTTaGTGCCCTGCCCCCTCATTTCACCCGCAGTCAGGGAATCCTGAA +
Preference number: 5 (lower is better)
Translates to: LPVLYVHPLPALGLC*CPAPSFHPQSGNPE
Trigger: TTCAGGATTCCCTGACTGCGGGTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATAACACAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp ACTGCACACAGCAAATCTCCAGTCGGTGGCATGGCCCTGAGAGTCTaGGGACTCATCCCCATTCTCCAGGGGCCTTTCCATCACGCCCTC +
Preference number: 5 (lower is better)
Translates to: TAHSKSPVGGMALRV*GLIPILQGPFHHAL
Trigger: GAGGGCGTGATGGAAAGGCCCCTGGAGAATGGGGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGACTGGAGATTTGCTGTGTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000562744.1
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
ENST00000568621.1
CDS-3UTR CAA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAGCCGAGAGCTACAGGTaGCATGGCCCAGGATGGCAA +
Preference number: 5 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMEAESYR*HGPGWQ
Trigger: TTGCCATCCTGGGCCATGCAACCTGTAGCTCTCGGC...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp TTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGGCCGAGAGCTACAGGTaGCATGGCCCAGGATGGCAA +
Preference number: 5 (lower is better)
Translates to: FRWPPGAGHKLPGSSVVEAESYR*HGPGWQ
Trigger: TTGCCATCCTGGGCCATGCAACCTGTAGCTCTCGGC...CTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp ATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAAGTCGCAGTGCGTGGGTaGGGGCAGCGACCAACGGTC +
Preference number: 5 (lower is better)
Translates to: IQALQPDFPREAPCQLVQVAVRG*GQRPTV
Trigger: GACCGTTGGTCGCTGCCCCAACCCACGCACTGCGAC...TTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGATGGCATCGCCCTGCTaGGACCTGGGTCCCCTACCA +
Preference number: 5 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLMASPC*DLGPLP
Trigger: TGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCAT...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGACIRW*LCRVSW
Trigger: CCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCAGCAGCAGTGCGTACTaGCCCATGCGCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: HMVPHQPTAWKHPMSALASSSAY*PMRWMG
Trigger: GCCCATCCAGCGCATGGGCAAGTACGCACTGCTGCT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGTGGAAGTCCCGCAGCTTCTCCAGGTTGCCAAAGAGGTGGGCACGCTGACCGCAGCTGCCCCTGTTCCTaGAGGTTAACATCACAGCCC +
Preference number: 5 (lower is better)
Translates to: SGSPAASPGCQRGGHADRSCPCS*RLTSQP
Trigger: GGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCT...GCGGTCAGCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCGGGACTTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTATGCGCACCTCCTTGTaGTGGACGGCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: TELGFKARHWGSAARSPPMRTSL*WTACLQ
Trigger: TTGGAGGCAGGCCGTCCACAACAAGGAGGTGCGCAT...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCATGCGCACCTCCTTGTaGTGGACGGCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCMRTSL*WTACLQ
Trigger: TTGGAGGCAGGCCGTCCACAACAAGGAGGTGCGCAT...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCATGCGCACCTCCTaGTTGTGGACGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALAMRTS*LWTACL
Trigger: GAGGCAGGCCGTCCACAACAAGGAGGTGCGCATGGC...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTTGACGGTGCGGTCGTaGATGGCTTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWLTVRS*MASSLG
Trigger: TCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAA...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CAA 90 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: AMFLGAAGCWIYCSSSPGERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...CCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS GCA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTaGAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACT +
Preference number: 5 (lower is better)
Translates to: TPWSQQIQRGNVPWS*RLLDLLLVQSRAQT
Trigger: AGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569875.5
CDS-3UTR CAA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGAGCACTCGGGCTGTGTaGGTGCCCTGCCCCCTCATT +
Preference number: 5 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSSTRAV*VPCPLI
Trigger: AATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTATGGCATCGCCCTGCTaGGACCTGGGTCCCCTACCA +
Preference number: 5 (lower is better)
Translates to: ADPERQCSLELQAAGSTAMASPC*DLGPLP
Trigger: TGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCAT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CAA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAATGGCATCGCCCTGCTaGGACCTGGGTCCCCTACCA +
Preference number: 5 (lower is better)
Translates to: DFPREAPCQLVQWPHTSEMASPC*DLGPLP
Trigger: TGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCAT...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CAA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCACCTCTGGGACCTCTaGCTTCAGCCATGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCHLWDL*LQPCQL
Trigger: GAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGTG...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGTCAGCCTTGTCCATaGCCGTCCTGTAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLRQPCP*PSCSLG
Trigger: GCCCAGACTACAGGACGGCAATGGACAAGGCTGACG...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGCTCTGCAGGGTCAGTaGGTGCAGCAATCCATCCAC +
Preference number: 5 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGALQGQ*VQQSIH
Trigger: GTGGATGGATTGCTGCACCAACTGACCCTGCAGAGC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGACIRW*LCRVSW
Trigger: CCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: TELGFKARHWGSAARSPPACIRW*LCRVSW
Trigger: CCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: HPGHSRSREAMFLGAAGCACIRW*LCRVSW
Trigger: CCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC...GCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTCGCAGCTTCTCCAGGTaGCCAAAGAGGTGGGCACGC +
Preference number: 5 (lower is better)
Translates to: PVPMVTELGFKARHWGSARSFSR*PKRWAR
Trigger: GCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCG...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCCGCAGCTTCTCCAGGTaGCCAAAGAGGTGGGCACGC +
Preference number: 5 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLRSFSR*PKRWAR
Trigger: GCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCG...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTACGCAGCTTCTCCAGGTaGCCAAAGAGGTGGGCACGC +
Preference number: 5 (lower is better)
Translates to: PREAPCQLVQWPHTSERVRSFSR*PKRWAR
Trigger: GCGTGCCCACCTCTTTGGCAACCTGGAGAAGCTGCG...TACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGGTGTGCCCATAGCTaGACATCAGGGCATCGGAGC +
Preference number: 5 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWRCAHS*TSGHRS
Trigger: GCTCCGATGCCCTGATGTCAAGCTATGGGCACACCT...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCCAGGAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCGTGGTCCCCCAGTGCTaGCTGCTTGTCCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ARSLFRLYNQTSLERPRAVVPQC*LLVLEE
Trigger: TTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCAC...GGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGAGCAGCAGTGCGTACTaGCCCATGCGCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: FPREAPCQLVQWPHTSERSSSAY*PMRWMG
Trigger: GCCCATCCAGCGCATGGGCAAGTACGCACTGCTGCT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTAGCAGCAGTGCGTACTaGCCCATGCGCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: ADPERQCSLELQAAGSTASSSAY*PMRWMG
Trigger: GCCCATCCAGCGCATGGGCAAGTACGCACTGCTGCT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATGCCATGCGCACCTCCTaGTTGTGGACGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYAMRTS*LWTACL
Trigger: GAGGCAGGCCGTCCACAACAAGGAGGTGCGCATGGC...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGATGTCTCGGAAGGCCTaGTTCCCCACACCCATGGAC +
Preference number: 5 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLMSRKA*FPTPMD
Trigger: GTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACAT...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000569875.5
CDS-3UTR CAA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATTGACGGTGCGGTCGTaGATGGCTTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LVTADPERQCSLELQAAGLTVRS*MASSLG
Trigger: TCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAA...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CAA 90 bp CACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAACTGTACAGGTGCAGGTaGAGGGACCCCAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: HPSHCLEAHGPPPAYSMELYRCR*RDPRTE
Trigger: CTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAG...TTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACACACGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LELQAAGSTARPVPGSDTRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...TGTGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563969.5
ENST00000567136.1
CDS GCA 90 bp GGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTaGTGGATCTACTGCTCGTCCAGTCCCGGGCTCAGACTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: GHSRSREAMFLGAAG*WIYCSSSPGLRLKE
Trigger: CTCTTTGAGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569875.5
CDS CCA 90 bp CACCATCTCAGCCATGCGCACCTCTGGGTGGAGAGTGGACATAAGTaGGATGCTTCTGGACATAAGCCTGTCCTTGGGCCTCTACCACCC +
Preference number: 5 (lower is better)
Translates to: HHLSHAHLWVESGHK*DASGHKPVLGPLPP
Trigger: GGGTGGTAGAGGCCCAAGGACAGGCTTATGTCCAGAAGCATCCCACTTATGTCCACTCTCCACCCAGAGGTGCGCATGGCTGAGATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562289.1
CDS-3UTR CAA 90 bp GGTCAGCAGGCTCTGAGAAGGCAACTGCTCCAGCTGCAGCCCGGAAGGCACTTCGAATTTGTGGGAAGATaGTGGGAAGGTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: GQQALRRQLLQLQPGRHFEFVGR*WEGQLC
Trigger: GCAGAGCTGACCTTCCCACAATCTTCCCACAAATTC...GAAGTGCCTTCCGGGCTGCAGCTGGAGCAGTTGCCTTCTCAGAGCCTGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCAGATCCTCTACCCCTTaGCCATCCCTGGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLRSSTP*PSLAPP
Trigger: AGGGGGTGCCAGGGATGGCAAAGGGGTAGAGGATCT...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATATGGCATCGCCCTGCTaGGACCTGGGTCCCCTACCA +
Preference number: 5 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYMASPC*DLGPLP
Trigger: TGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCAT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CAA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCACCTCTGGGACCTCTaGCTTCAGCCATGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVHLWDL*LQPCQL
Trigger: GAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGTG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGCTCTGCAGGGTCAGTaGGTGCAGCAATCCATCCAC +
Preference number: 5 (lower is better)
Translates to: ERQCSLELQAAGSTARPVALQGQ*VQQSIH
Trigger: GTGGATGGATTGCTGCACCAACTGACCCTGCAGAGC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: HTLVTADPERQCSLELQAACIRW*LCRVSW
Trigger: CCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCGCCTGTATTCGCTGGTaGCTCTGCAGGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSACIRW*LCRVSW
Trigger: CCAACTGACCCTGCAGAGCAACCAGCGAATACAGGC...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TTTCGATGGCCCCCTGGAGCAGGGCACAAGCTGCCTGGCAGTTCTGTAGTAGAGCCCAGTGCTTGCTGCTaGTCCTTGAAGAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: FRWPPGAGHKLPGSSVVEPSACC*SLKKVC
Trigger: GCACACCTTCTTCAAGGACAAGCAGCAAGCACTGGG...CTCTACTACAGAACTGCCAGGCAGCTTGTGCCCTGCTCCAGGGGGCCATCGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563969.5
CDS-3UTR CAA 90 bp CCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGTGGTCCCCCAGTGCTaGCTGCTTGTCCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PWSQQIQRGNVPWSCRLLVVPQC*LLVLEE
Trigger: TTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCAC...CAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCATCTCGAAGCGCAGGTaGCTGTTCCCACAGCACTCA +
Preference number: 5 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGISKRR*LFPQHS
Trigger: TGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGAT...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTGTGTTCATCTCGAAGCGCAGGTaGCTGTTCCCACAGCACTCA +
Preference number: 5 (lower is better)
Translates to: LGFKARHWGSAARSPPVFISKRR*LFPQHS
Trigger: TGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGAT...GAACACAGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGAAGGTGTCCCTGGCCTaGCGGCGGCGGAACCAGATC +
Preference number: 5 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQKVSLA*RRRNQI
Trigger: GATCTGGTTCCGCCGCCGCAAGGCCAGGGACACCTT...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGATGCGCACCTCCTTGTaGTGGACGGCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSMRTSL*WTACLQ
Trigger: TTGGAGGCAGGCCGTCCACAACAAGGAGGTGCGCAT...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGCCATGCGCACCTCCTaGTTGTGGACGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQAMRTS*LWTACL
Trigger: GAGGCAGGCCGTCCACAACAAGGAGGTGCGCATGGC...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGATGTCTCGGAAGGCCTaGTTCCCCACACCCATGGAC +
Preference number: 5 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLMSRKA*FPTPMD
Trigger: GTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACAT...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000569875.5
CDS-3UTR CAA 90 bp CACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTATGTCTCGGAAGGCCTaGTTCCCCACACCCATGGAC +
Preference number: 5 (lower is better)
Translates to: HTLVTADPERQCSLELQAMSRKA*FPTPMD
Trigger: GTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACAT...AGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000569875.5
CDS-3UTR CAA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACATTGACGGTGCGGTCGTaGATGGCTTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATLTVRS*MASSLG
Trigger: TCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAA...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CAA 90 bp CAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCTTGACGGTGCGGTCGTaGATGGCTTCCTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: QIQRGNVPWSCRLLDLLLLTVRS*MASSLG
Trigger: TCCCAGCGAGGAAGCCATCAACGACCGCACCGTCAA...GAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp CTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGAGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LVTADPERQCSLELQAAGERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CAA 90 bp ACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTAGGAGCCCACCTCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: TELGFKARHWGSAARSPPRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...AGGTGGGCTCCTAGCAGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GTATTCGCTGGTTGCTCTGCAGGGTCAGTTGGTGCAGCAATCCATCCACCCGGTGGGAAGGGAAATGACTaGGGTCTGCCTTGGACCACC +
Preference number: 5 (lower is better)
Translates to: VFAGCSAGSVGAAIHPPGGKGND*GLPWTT
Trigger: GGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCCC...ACCGGGTGGATGGATTGCTGCACCAACTGACCCTGCAGAGCAACCAGCGAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS TCA 90 bp CCGGGTGCAACGGCTTCCCTGGCTCTAAGGCAGGCACCTCTTTCATaGACCTGGGGATTACAACAGGCACAGTGGGACCAACAGCAATCT +
Preference number: 5 (lower is better)
Translates to: PGATASLALRQAPLS*TWGLQQAQWDQQQS
Trigger: AGATTGCTGTTGGTCCCACTGTGCCTGTTGTAATCCCCAGGTTCATGAAAGAGGTGCCTGCCTTAGAGCCAGGGAAGCCGTTGCACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp TTCCCCACACCCATGGACACCATCTCAGCCATGCGCACCTCTGGGTaGAGAGTGGACATAAGTGGGATGCTTCTGGACATAAGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: FPTPMDTISAMRTSG*RVDISGMLLDISLS
Trigger: GGACAGGCTTATGTCCAGAAGCATCCCACTTATGTCCACTCTCCACCCAGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562289.1
CDS-3UTR CAA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGCAGGAACTCTGCTCTTaGAGCCTCACCCTCCTCACC +
Preference number: 5 (lower is better)
Translates to: FPREAPCQLVQWPHTSERQELCS*SLTLLT
Trigger: GGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCTG...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp GGGCACCCTAGTCACTGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGAGAAGAGGGAAGAACTaGGAGCACAAATTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: GHPSHCLEAHGPPPAYSMRRGKN*EHKFGH
Trigger: ATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTCT...CATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCAGTGACTAGGGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GAGCCTATTCAGGCTCTACAACCAGACTTCCCTAGAGAGGCCCCGTGCCAGTTACACCTCTGGGACCTCTaGCTTCAGCCATGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: EPIQALQPDFPREAPCQLHLWDL*LQPCQL
Trigger: GAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGTG...TAACTGGCACGGGGCCTCTCTAGGGAAGTCTGGTTGTAGAGCCTGAATAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCACCTCTGGGACCTCTaGCTTCAGCCATGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSHLWDL*LQPCQL
Trigger: GAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGTG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATCGTCAGCCTTGTCCATaGCCGTCCTGTAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYRQPCP*PSCSLG
Trigger: GCCCAGACTACAGGACGGCAATGGACAAGGCTGACG...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CCTGTCCCTATGGTAACTGAGCTCGGCTTTAAGGCCAGGCATTGGGGATCAGCTGCTCTGCAGGGTCAGTaGGTGCAGCAATCCATCCAC +
Preference number: 5 (lower is better)
Translates to: PVPMVTELGFKARHWGSAALQGQ*VQQSIH
Trigger: GTGGATGGATTGCTGCACCAACTGACCCTGCAGAGC...AGCTGATCCCCAATGCCTGGCCTTAAAGCCGAGCTCAGTTACCATAGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGCTCTGCAGGGTCAGTaGGTGCAGCAATCCATCCAC +
Preference number: 5 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYALQGQ*VQQSIH
Trigger: GTGGATGGATTGCTGCACCAACTGACCCTGCAGAGC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGAGGTGTGCCCATAGCTaGACATCAGGGCATCGGAGC +
Preference number: 5 (lower is better)
Translates to: FPREAPCQLVQWPHTSERRCAHS*TSGHRS
Trigger: GCTCCGATGCCCTGATGTCAAGCTATGGGCACACCT...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCATCTCGAAGCGCAGGTaGCTGTTCCCACAGCACTCA +
Preference number: 5 (lower is better)
Translates to: SREAMFLGAAGCWIYCSSISKRR*LFPQHS
Trigger: TGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGAT...GGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTACTGTACAGGTGCAGGTaGAGGGACCCCAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: RHMVPHQPTAWKHPMSALLYRCR*RDPRTE
Trigger: CTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAG...TAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACCTGTACAGGTGCAGGTaGAGGGACCCCAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYLYRCR*RDPRTE
Trigger: CTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAG...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCTGTACAGGTGCAGGTaGAGGGACCCCAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSLYRCR*RDPRTE
Trigger: CTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACTGTACAGGTGCAGGTaGAGGGACCCCAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATLYRCR*RDPRTE
Trigger: CTCTGTTCTGGGGTCCCTCAACCTGCACCTGTACAG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CAA 90 bp TTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FPREAPCQLVQWPHTSERERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...CCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: VTADPERQCSLELQAAGSERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGAGAGGCAATGTTCCTaGGAGCTGCAGGCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: APCQLVQWPHTSERVVNSERQCS*ELQAAG
Trigger: TCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: HMVPHQPTAWKHPMSALARCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAGCCACACTTCAATCTGGTGCAGTCCGCTTTCCCGGGCCTCCAGTGTTTGGAGAGACCTCCAAAGTCTaGACACTCATCTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: AATLQSGAVRFPGPPVFGETSKV*TLISPG
Trigger: GCCTGGAGAGATGAGTGTCAAGACTTTGGAGGTCTC...TCCAAACACTGGAGGCCCGGGAAAGCGGACTGCACCAGATTGAAGTGTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CAA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGGGAAGGGAAATGACTaGGGTCTGCCTTGGACCACC +
Preference number: 5 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSGKGND*GLPWTT
Trigger: GGTGGTCCAAGGCAGACCCAAGTCATTTCCCTTCCC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS TCA 90 bp AATCCTGAACTGATGAAAGCTACCCAAGTGGGTAGCTGTGCGATTTaGGGTCCCTTTAGGGCATGTGGGCCTGGCCCGACACTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: NPELMKATQVGSCAI*GPFRACGPGPTLPR
Trigger: TCTGGGGAGTGTCGGGCCAGGCCCACATGCCCTAAAGGGACCTCAAATCGCACAGCTACCCACTTGGGTAGCTTTCATCAGTTCAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 90 bp AGGCCTGGCTTCTCCACTTACCTGCTGGGGGCGCTCCAGGAACTCTaGTCTTTGAGCCTCACCCTCCTCACCTGTAAAAATGGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: RPGFSTYLLGALQEL*SLSLTLLTCKNGKS
Trigger: TGACTTTCCATTTTTACAGGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCTGGAGCGCCCCCAGCAGGTAAGTGGAGAAGCCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 90 bp CTTGTTCCCCACACCCATGGACACCATCTCAGCCATGCGCACCTCTaGGTGGAGAGTGGACATAAGTGGGATGCTTCTGGACATAAGCCT +
Preference number: 5 (lower is better)
Translates to: LVPHTHGHHLSHAHL*VESGHKWDASGHKP
Trigger: AGGCTTATGTCCAGAAGCATCCCACTTATGTCCACTCTCCACCCAGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562289.1
CDS-3UTR CAA 90 bp CCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGCACAGAATAAATGCTTaGGGGCGCCTGACACTGATC +
Preference number: 5 (lower is better)
Translates to: PGHSRSREAMFLGAAGCWHRINA*GRLTLI
Trigger: GATCAGTGTCAGGCGCCCCAAAGCATTTATTCTGTG...CCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAAGGGGAGCCTTGGAGTaGTCCTGCTCCATCCCTAAC +
Preference number: 5 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLRGALE*SCSIPN
Trigger: GTTAGGGATGGAGCAGGACAACTCCAAGGCTCCCCT...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGAGCACTCGGGCTGTGTaGGTGCCCTGCCCCCTCATT +
Preference number: 5 (lower is better)
Translates to: MATHIRKGSQQRCTCRLESTRAV*VPCPLI
Trigger: AATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCT...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGATGGCATCGCCCTGCTaGGACCTGGGTCCCCTACCA +
Preference number: 5 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEMASPC*DLGPLP
Trigger: TGGTAGGGGACCCAGGTCCAAGCAGGGCGATGCCAT...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000563969.5
CDS-3UTR CAA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGCTCTGCAGGGTCAGTaGGTGCAGCAATCCATCCAC +
Preference number: 5 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLALQGQ*VQQSIH
Trigger: GTGGATGGATTGCTGCACCAACTGACCCTGCAGAGC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCCCAGTGCTTGCTGCTaGTCCTTGAAGAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ADPERQCSLELQAAGSTAPSACC*SLKKVC
Trigger: GCACACCTTCTTCAAGGACAAGCAGCAAGCACTGGG...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCCCCAGTGCTTGCTGCTaGTCCTTGAAGAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: APCQLVQWPHTSERVVNSPSACC*SLKKVC
Trigger: GCACACCTTCTTCAAGGACAAGCAGCAAGCACTGGG...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCCCAGTGCTTGCTGCTaGTCCTTGAAGAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: VTADPERQCSLELQAAGSPSACC*SLKKVC
Trigger: GCACACCTTCTTCAAGGACAAGCAGCAAGCACTGGG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGCCCAGTGCTTGCTGCTaGTCCTTGAAGAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSPSACC*SLKKVC
Trigger: GCACACCTTCTTCAAGGACAAGCAGCAAGCACTGGG...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTGTGGTCCCCCAGTGCTaGCTGCTTGTCCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ADPERQCSLELQAAGSTAVVPQC*LLVLEE
Trigger: TTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCAC...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp AGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGGTGGTCCCCCAGTGCTaGCTGCTTGTCCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: RSREAMFLGAAGCWIYCSVVPQC*LLVLEE
Trigger: TTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCAC...CGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTAGCAGCAGTGCGTACTaGCCCATGCGCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGSSSAY*PMRWMG
Trigger: GCCCATCCAGCGCATGGGCAAGTACGCACTGCTGCT...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCAGCTGCCCCTGTTCCTaGAGGTTAACATCACAGCCC +
Preference number: 5 (lower is better)
Translates to: IQRGNVPWSCRLLDLLLVSCPCS*RLTSQP
Trigger: GGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCT...GACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTAGCTGCCCCTGTTCCTaGAGGTTAACATCACAGCCC +
Preference number: 5 (lower is better)
Translates to: ADPERQCSLELQAAGSTASCPCS*RLTSQP
Trigger: GGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCT...AGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCATCTCGAAGCGCAGGTaGCTGTTCCCACAGCACTCA +
Preference number: 5 (lower is better)
Translates to: APCQLVQWPHTSERVVNSISKRR*LFPQHS
Trigger: TGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGAT...GCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAATGTCTCGGAAGGCCTaGTTCCCCACACCCATGGAC +
Preference number: 5 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLMSRKA*FPTPMD
Trigger: GTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACAT...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GACTTCCCTAGAGAGGCCCCGTGCCAGTTAGTCCAATGGCCACACACATCAGAACGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: DFPREAPCQLVQWPHTSERCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...TTCTGATGTGTGTGGCCATTGGACTAACTGGCACGGGGCCTCTCTAGGGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp GTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: VTADPERQCSLELQAAGSRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...AGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS-3UTR CAA 90 bp GGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGGTGTCAGCCACACGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GSQQRCTCRLEVAQVSATRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...TGTGGCTGACACCTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
ENST00000569875.5
CDS-3UTR CAA 90 bp ACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGGAATTTGTGGGAAGATaGTGGGAAGGTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: TPWSQQIQRGNVPWSCRLEFVGR*WEGQLC
Trigger: GCAGAGCTGACCTTCCCACAATCTTCCCACAAATTC...CAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp GAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTGCTCGTCCAGTCGACACTCCCCAGAATTaGTGGGAAGATTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: ERQCSLELQAAGSTARPVDTPQN*WEDCGK
Trigger: CTTCCCACAATCTTCCCACAAATTCTGGGGAGTGTC...GACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp CCACACCCTGGTCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCAGAAGAGGGAAGAACTaGGAGCACAAATTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: PHPGHSRSREAMFLGAAGRRGKN*EHKFGH
Trigger: ATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTCT...GCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGACCAGGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTAGTGGTCCCCCAGTGCTaGCTGCTTGTCCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLVVPQC*LLVLEE
Trigger: TTCTTCAAGGACAAGCAGCAAGCACTGGGGGACCAC...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATAGCTGCCCCTGTTCCTaGAGGTTAACATCACAGCCC +
Preference number: 5 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYSCPCS*RLTSQP
Trigger: GGGCTGTGATGTTAACCTCAAGGAACAGGGGCAGCT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCTATATCTCGAAGCGCAGGTaGCTGTTCCCACAGCACTCA +
Preference number: 5 (lower is better)
Translates to: MVPHQPTAWKHPMSALAYISKRR*LFPQHS
Trigger: TGAGTGCTGTGGGAACAGCAACCTGCGCTTCGAGAT...ATAGGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGTAGCCCAGATGTCTCGGAAGGCCTaGTTCCCCACACCCATGGAC +
Preference number: 5 (lower is better)
Translates to: HIRKGSQQRCTCRLEVAQMSRKA*FPTPMD
Trigger: GTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACAT...CTGGGCTACCTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACGAGACCTCCAAAGTCTaGACACTCATCTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: HSRSREAMFLGAAGCWIYETSKV*TLISPG
Trigger: GCCTGGAGAGATGAGTGTCAAGACTTTGGAGGTCTC...GTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CAA 90 bp TGCCTAGAGGCACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCAGAAGAGGGAAGAACTaGGAGCACAAATTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: CLEAHGPPPAYSMETPNVRRGKN*EHKFGH
Trigger: ATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTCT...GACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTGCCTCTAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CACATGGTCCCCCACCAGCCTACAGCATGGAAACACCCAATGTCTGCTCTAGCCAGAAGAGGGAAGAACTaGGAGCACAAATTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: HMVPHQPTAWKHPMSALARRGKN*EHKFGH
Trigger: ATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTCT...GGCTAGAGCAGACATTGGGTGTTTCCATGCTGTAGGCTGGTGGGGGACCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp CTTTCCCGGGCCTCCAGTGTTTGGACCAACTCTAGGGCCTGTATTCGCTGGTTGAGAAGAGGGAAGAACTaGGAGCACAAATTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: LSRASSVWTNSRACIRWLRRGKN*EHKFGH
Trigger: ATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTCT...CAACCAGCGAATACAGGCCCTAGAGTTGGTCCAAACACTGGAGGCCCGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGCACCTCTGGGACCTCTaGCTTCAGCCATGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEHLWDL*LQPCQL
Trigger: GAGCTGACATGGCTGAAGCAAGAGGTCCCAGAGGTG...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS-3UTR CAA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTAGGTGTGCCCATAGCTaGACATCAGGGCATCGGAGC +
Preference number: 5 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGRCAHS*TSGHRS
Trigger: GCTCCGATGCCCTGATGTCAAGCTATGGGCACACCT...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
CDS TCA 90 bp AATGCTTTGGGGCGCCTGACACTGATCACACTACCCCTGCCCTCCTaGGGCTCCACATCTATGTATCCCATGGAAACCAGAGTCACAAAT +
Preference number: 5 (lower is better)
Translates to: NALGRLTLITLPLPS*GSTSMYPMETRVTN
Trigger: ATTTGTGACTCTGGTTTCCATGGGATACATAGATGTGGAGCCTCAGGAGGGCAGGGGTAGTGTGATCAGTGTCAGGCGCCCCAAAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp TCACAGCAGATCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACACAGAATAAATGCTTaGGGGCGCCTGACACTGATC +
Preference number: 5 (lower is better)
Translates to: SQQIQRGNVPWSCRLLDLHRINA*GRLTLI
Trigger: GATCAGTGTCAGGCGCCCCAAAGCATTTATTCTGTG...TAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGATCTGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp GTCCAATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTCGTTGCACATGTAGGTaGGAGGTAGCCCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: VQWPHTSERVVNSVAHVGRCTCR*EVAQVS
Trigger: TGACACCTGGGCTACCTCCAACCTACATGTGCAACG...ACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCATTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000567136.1
CDS CCA 90 bp CTGTATGTTATCCACTTCCGTACTTTCAGCATCCAGCACAGGGCCTaGCACAGAATAAATGCTTTGGGGCGCCTGACACTGATCACACTA +
Preference number: 5 (lower is better)
Translates to: LYVIHFRTFSIQHRA*HRINALGRLTLITL
Trigger: TAGTGTGATCAGTGTCAGGCGCCCCAAAGCATTTATTCTGTGCCAGGCCCTGTGCTGGATGCTGAAAGTACGGAAGTGGATAACATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp ATGGCCACACACATCAGAAAGGGTAGTCAACAGCGTTGCACATGTAGGTTGGAGGACACTCCCCAGAATTaGTGGGAAGATTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: MATHIRKGSQQRCTCRLEDTPQN*WEDCGK
Trigger: CTTCCCACAATCTTCCCACAAATTCTGGGGAGTGTC...CTCCAACCTACATGTGCAACGCTGTTGACTACCCTTTCTGATGTGTGTGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS-3UTR CAA 90 bp AAGAACTTGGAGCACAAATTCGGGCATCAACTAGCACTGTCAGTCCCAGTGCCTAGAAGAGGGAAGAACTaGGAGCACAAATTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: KNLEHKFGHQLALSVPVPRRGKN*EHKFGH
Trigger: ATGCCCGAATTTGTGCTCCAAGTTCTTCCCTCTTCT...AGGCACTGGGACTGACAGTGCTAGTTGATGCCCGAATTTGTGCTCCAAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS CAA 90 bp GCCCCGCAGACCGCGCGCCTCACCCGCGGCGTCGCAGTGCGTGGGTaGGGGCAGCGACCAACGGTCGGCAGCTCCACCGTGCCCACTCCC +
Preference number: 6 (lower is better)
Translates to: APQTARLTRGVAVRG*GQRPTVGSSTVPTP
Trigger: GGGAGTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGTGAGGCGCGCGGTCTGCGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp ACAGCCCTGCCGGCGCGGAAGACAAGGTGCGGGCCCTaGAGCAACCCCCGCCCGCCGCCGTCCTCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: TALPARKTRCGP*SNPRPPPSSPW
Trigger: CCACGGAGAGGACGGCGGCGGGCGGGGGTTGCTGCAGGGCCCGCACCTTGTCTTCCGCGCCGGCAGGGCTGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp GCGTCCTCACGGCCACGCTCTGCAGGCCCATGCCCGTaGGGGCGGCCCCGCCATGGCACCACGATGCCTCGG +
Preference number: 6 (lower is better)
Translates to: ASSRPRSAGPCP*GRPRHGTTMPR
Trigger: CCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
ENST00000568621.1
CDS GCA 72 bp GGTTGGGGCAGCGACCAACGGTCGGCAGCTCCACCGTaGCCACTCCCCGGGCCTGGCGAGGACGCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: GWGSDQRSAAPP*PLPGPGEDAGS
Trigger: GCTTCCGGCGTCCTCGCCAGGCCCGGGGAGTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000562744.1
ENST00000563969.5
CDS GCA 72 bp CCCTCAGCGTCCTCACGGCCACGCTCTGCAGGCCCATaGCCGTGGGGGCGGCCCCGCCATGGCACCACGATG +
Preference number: 6 (lower is better)
Translates to: PSASSRPRSAGP*PWGRPRHGTTM
Trigger: CATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
ENST00000568621.1
CDS GCA 72 bp TCTGTCCAGGTCCCCCGTCGGACGCCCGTGGGCCTCTaGTCCGTGCGCGCCCACCCTCAGCGTCCTCACGGC +
Preference number: 6 (lower is better)
Translates to: SVQVPRRTPVGL*SVRAHPQRPHG
Trigger: GCCGTGAGGACGCTGAGGGTGGGCGCGCACGGAGCAGAGGCCCACGGGCGTCCGACGGGGGACCTGGACAGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
CDS CCA 72 bp ACGGTCGGCAGCTCCACCGTGCCCACTCCCCGGGCCTaGCGAGGACGCCGGAAGCGCTCTCCCGCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TVGSSTVPTPRA*RGRRKRSPARK
Trigger: CTTCCTGGCGGGAGAGCGCTTCCGGCGTCCTCGCCAGGCCCGGGGAGTGGGCACGGTGGAGCTGCCGACCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000562744.1
ENST00000563969.5
CDS CCA 72 bp CTCTGCAGGCCCATGCCCGTGGGGGCGGCCCCGCCATaGCACCACGATGCCTCGGGTTCGCTCTCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: LCRPMPVGAAPP*HHDASGSLSCR
Trigger: CCGGCAGGAGAGCGAACCCGAGGCATCGTGGTGCCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360461.9
ENST00000450733.5
ENST00000563969.5
ENST00000568621.1
CDS GCA 72 bp GCCACAGCCCGAGCAGGTCTCGACGGGGCACAGCCCTaGCGGCGCGGAAGACAAGGTGCGGGCCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: ATARAGLDGAQP*RRGRQGAGPAA
Trigger: TGCTGCAGGGCCCGCACCTTGTCTTCCGCGCCGGCAGGGCTGTGCCCCGTCGAGACCTGCTCGGGCTGTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp GCAATTCAGGCCCTCAGCGTCCTCACGGCCACGCTCTaGAGGCCCATGCCCGTGGGGGCGGCCCCGCCATGG +
Preference number: 6 (lower is better)
Translates to: AIQALSVLTATL*RPMPVGAAPPW
Trigger: CCATGGCGGGGCCGCCCCCACGGGCATGGGCCTGCAGAGCGTGGCCGTGAGGACGCTGAGGGCCTGAATTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568621.1
CDS TCA 72 bp GACACTCACGCCCCCGGGCCGAGCCGCGGGGAACCGTaGAGTCGGACAGCCTTCGAACAGACGGCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: DTHAPGPSRGEP*SRTAFEQTAAS
Trigger: CGAGGCCGCCGTCTGTTCGAAGGCTGTCCGACTTCACGGTTCCCCGCGGCTCGGCCCGGGGGCGTGAGTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000563969.5
ENST00000568621.1
CDS TCA 72 bp TGCTGCCTCGCCGCGGGCACCCAGAGACAGGTCGCATaGTCCCACGTGGGATGGGGCTGCCATCCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: CCLAAGTQRQVA*SHVGWGCHPGG
Trigger: CCCACCCGGATGGCAGCCCCATCCCACGTGGGATCATGCGACCTGTCTCTGGGTGCCCGCGGCGAGGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS TCA 72 bp AATTCAGGCGCCCCCGGGCCGAGCCGCGGGGAACCGTaGAGTCGGACAGCCTTCGAACAGACGGCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: NSGAPGPSRGEP*SRTAFEQTAAS
Trigger: CGAGGCCGCCGTCTGTTCGAAGGCTGTCCGACTTCACGGTTCCCCGCGGCTCGGCCCGGGGGCGCCTGAATT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379344.8
CDS CCA 72 bp CTGCAATTCAGGCCCGCGGCGTCGCAGTGCGTGGGTTaGGGCAGCGACCAACGGTCGGCAGCTCCACCGTGC +
Preference number: 6 (lower is better)
Translates to: LQFRPAASQCVG*GSDQRSAAPPC
Trigger: GCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGCCTGAATTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562744.1
CDS CAA 90 bp GGCACAGGAACTGCAATTCAGGCCCGCGGCGTCGCAGTGCGTGGGTaGGGGCAGCGACCAACGGTCGGCAGCTCCACCGTGCCCACTCCC +
Preference number: 6 (lower is better)
Translates to: GTGTAIQARGVAVRG*GQRPTVGSSTVPTP
Trigger: GGGAGTGGGCACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGCCTGAATTGCAGTTCCTGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562744.1
CDS GCA 72 bp ACGGGAGGGGAAGGCCTTCTGTGTAGGGAAGCGGGGTaGTGCCTCGCCGCGGGCACCCAGAGACAGGTCGCA +
Preference number: 6 (lower is better)
Translates to: TGGEGLLCREAG*CLAAGTQRQVA
Trigger: TGCGACCTGTCTCTGGGTGCCCGCGGCGAGGCAGCACCCCGCTTCCCTACACAGAAGGCCTTCCCCTCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CAA 72 bp ACTGCAATTCAGGCCCGCGGCGTCGCAGTGCGTGGGTaGGGGCAGCGACCAACGGTCGGCAGCTCCACCGTG +
Preference number: 6 (lower is better)
Translates to: TAIQARGVAVRG*GQRPTVGSSTV
Trigger: CACGGTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGCCTGAATTGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562744.1
CDS GCA 72 bp GCACAGGAACTGCAATTCAGGCCCGCGGCGTCGCAGTaGGTGGGTTGGGGCAGCGACCAACGGTCGGCAGCT +
Preference number: 6 (lower is better)
Translates to: AQELQFRPAASQ*VGWGSDQRSAA
Trigger: AGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGCCTGAATTGCAGTTCCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562744.1
CDS CCA 72 bp AGGAACTGCAATTCAGGCCCGCGGCGTCGCAGTGCGTaGGTTGGGGCAGCGACCAACGGTCGGCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: RNCNSGPRRRSA*VGAATNGRQLH
Trigger: GTGGAGCTGCCGACCGTTGGTCGCTGCCCCAACCCACGCACTGCGACGCCGCGGGCCTGAATTGCAGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562744.1
CDS CCA 72 bp TGGACAAGGGGCTGCCCTGTAGCTCCTCATCCTGGGTaGCCCCGGCTGGTGGTCTTGGAGGACCTGGGTCCT +
Preference number: 6 (lower is better)
Translates to: WTRGCPVAPHPG*PRLVVLEDLGP
Trigger: AGGACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGCTACAGGGCAGCCCCTTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
CDS CCA 72 bp TTCCTGGACAAGGGGCTGCCCTGTAGCTCCTCATCCTaGGTGGCCCCGGCTGGTGGTCTTGGAGGACCTGGG +
Preference number: 6 (lower is better)
Translates to: FLDKGLPCSSSS*VAPAGGLGGPG
Trigger: CCCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
CDS GCA 72 bp CGCGCTGAAGACAGTCGAGTGGGACTCAGTGGGCAATaGAGGCGAAGGGCATGGGCCGCAGGAGGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: RAEDSRVGLSGQ*RRRAWAAGGAS
Trigger: ACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCGACTGTCTTCAGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000562744.1
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
ENST00000568621.1
CDS CCA 72 bp CGAGTGGGACTCAGTGGGCAATGCAGGCGAAGGGCATaGGCCGCAGGAGGTGCCAGTCTTAGTGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RVGLSGQCRRRA*AAGGASLSARA
Trigger: TGCCCTGGCACTAAGACTGGCACCTCCTGCGGCCCATGCCCTTCGCCTGCATTGCCCACTGAGTCCCACTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000562744.1
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
ENST00000568621.1
CDS CCA 72 bp CCCACCCTCCTGGCTTCAGGAAGCATCATCCAACCTTaGCTTCCTCCCCAGTTCTGTCCCAGGGCCACCCCC +
Preference number: 6 (lower is better)
Translates to: PTLLASGSIIQP*LPPQFCPRATP
Trigger: GGGGGTGGCCCTGGGACAGAACTGGGGAGGAAGCCAAGGTTGGATGATGCTTCCTGAAGCCAGGAGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp GGGCTGTGGGCACACAGAAGCAGCACTGCCCGGCCTTaGACATCCCGAGTCCCTGGGTCCTTAACGTGCATC +
Preference number: 6 (lower is better)
Translates to: GLWAHRSSTARP*TSRVPGSLTCI
Trigger: GATGCACGTTAAGGACCCAGGGACTCGGGATGTCCAAGGCCGGGCAGTGCTGCTTCTGTGTGCCCACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562744.1
CDS CAA 90 bp GGGCATGTGGGCCTGGCCCGACACTCCCCAGAATTTGTGGGAAGATaGTGGGAAGGTCAGCTCTGCGACCAGGAGAAGACCCTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: GHVGLARHSPEFVGR*WEGQLCDQEKTLSP
Trigger: GGGGCTCAGGGTCTTCTCCTGGTCGCAGAGCTGACCTTCCCACAATCTTCCCACAAATTCTGGGGAGTGTCGGGCCAGGCCCACATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp TACGTTCACCCGCTGCCAGCACTCGGGCTGTGTTGGTaGCCTGCCCCCTCATTTCACCCGCAGTCAGGGAAT +
Preference number: 6 (lower is better)
Translates to: YVHPLPALGLCW*PAPSFHPQSGN
Trigger: ATTCCCTGACTGCGGGTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCTGGCAGCGGGTGAACGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp ACTGGGGAAGACTCCCTGTGTTATACGTTCACCCGCTaGCAGCACTCGGGCTGTGTTGGTGCCCTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: TGEDSLCYTFTR*QHSGCVGALPP
Trigger: AGGGGGCAGGGCACCAACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATAACACAGGGAGTCTTCCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp TGCAATTCAGGCCTGCTGGGGGCGCTCCAGGAACTCTaGTCTTTGAGCCTCACCCTCCTCACCTGGCACCCT +
Preference number: 6 (lower is better)
Translates to: CNSGLLGALQEL*SLSLTLLTWHP
Trigger: AGGGTGCCAGGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCTGGAGCGCCCCCAGCAGGCCTGAATTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562144.5
CDS GCA 72 bp CAGGAGGTGCCAGTCTTAGTGCCAGGGCACAGGAACTaGAATTCAGGCCTGCTGGGGGCGCTCCAGGAACTC +
Preference number: 6 (lower is better)
Translates to: QEVPVLVPGHRN*NSGLLGALQEL
Trigger: GAGTTCCTGGAGCGCCCCCAGCAGGCCTGAATTGCAGTTCCTGTGCCCTGGCACTAAGACTGGCACCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562144.5
ENST00000565899.1
CDS CCA 72 bp TTATACGTTCACCCGCTGCCAGCACTCGGGCTGTGTTaGTGCCCTGCCCCCTCATTTCACCCGCAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: LYVHPLPALGLC*CPAPSFHPQSG
Trigger: CCCTGACTGCGGGTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp ATCCTGGGTGGCCCCGGCTGGTGGTCTTGGAGGACCTaGGTCCTTAACGTGCATCTGGGAAGCAGGTTCCTC +
Preference number: 6 (lower is better)
Translates to: ILGGPGWWSWRT*VLNVHLGSRFL
Trigger: GAGGAACCTGCTTCCCAGATGCACGTTAAGGACCCAGGTCCTCCAAGACCACCAGCCGGGGCCACCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
CDS CCA 72 bp CCCTCCTCACCGAGGAGCCTTCTTCATGAGCAGGTCTaGCTGCCAGAGGGGAGCCTTGGAGTTGTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: PSSPRSLLHEQV*LPEGSLGVVLL
Trigger: GAGCAGGACAACTCCAAGGCTCCCCTCTGGCAGCCAGACCTGCTCATGAAGAAGGCTCCTCGGTGAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565899.1
CDS CAA 72 bp GTTATACGTTCACCCGCTGCCAGCACTCGGGCTGTGTaGGTGCCCTGCCCCCTCATTTCACCCGCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: VIRSPAASTRAV*VPCPLISPAVR
Trigger: CCTGACTGCGGGTGAAATGAGGGGGCAGGGCACCAACACAGCCCGAGTGCTGGCAGCGGGTGAACGTATAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp CTGGCCCTTCTGACAGGACTGAGGAGCTTTCTACTGTaGCCCTCTGGGCATCCCCCGACTCATCTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LALLTGLRSFLL*PSGHPPTHLQL
Trigger: CAGCTGCAGATGAGTCGGGGGATGCCCAGAGGGGCACAGTAGAAAGCTCCTCAGTCCTGTCAGAAGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000565773.1
CDS CCA 72 bp AGGCAGCTACCGAGGAGCCTTCTTCATGAGCAGGTCTaGCTGCCAGAGGGGAGCCTTGGAGTTGTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: RQLPRSLLHEQV*LPEGSLGVVLL
Trigger: GAGCAGGACAACTCCAAGGCTCCCCTCTGGCAGCCAGACCTGCTCATGAAGAAGGCTCCTCGGTAGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp CCTTGGACATCCCGAGTCCCCTGTGCCAAGCTGAGGTaGGAGGACATGGGGCATAGGAGACTCTCCACTCCA +
Preference number: 6 (lower is better)
Translates to: PWTSRVPCAKLR*EDMGHRRLSTP
Trigger: TGGAGTGGAGAGTCTCCTATGCCCCATGTCCTCCCACCTCAGCTTGGCACAGGGGACTCGGGATGTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450733.5
CDS CAA 90 bp CGAGGAGCCTTCTTCATGAGCAGGTCTGGCTGCCAGAGGGGAGCCTaGGAGTTGTCCTGCTCCATCCCTAACTCCCAGCCAGACCTCTCT +
Preference number: 6 (lower is better)
Translates to: RGAFFMSRSGCQRGA*ELSCSIPNSQPDLS
Trigger: AGAGAGGTCTGGCTGGGAGTTAGGGATGGAGCAGGACAACTCCAAGGCTCCCCTCTGGCAGCCAGACCTGCTCATGAAGAAGGCTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360461.9
ENST00000563969.5
ENST00000565899.1
CDS CAA 90 bp CGGTCGTTGATGGCTTCCTCGCTGGGAGCAATGTCTCGGAAGGCCTaGTTCCCCACACCCATGGACACCATCTCAGCCATGCGCACCTCT +
Preference number: 6 (lower is better)
Translates to: RSLMASSLGAMSRKA*FPTPMDTISAMRTS
Trigger: AGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACATTGCTCCCAGCGAGGAAGCCATCAACGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562289.1
CDS GCA 72 bp GCAATGTTCCTTGGAGCTGCAGGCTGCTGGATCTACTaGTCGTCCAGTCCCGGGCTCAGACTCAAAGAGGGC +
Preference number: 6 (lower is better)
Translates to: AMFLGAAGCWIY*SSSPGLRLKEG
Trigger: GCCCTCTTTGAGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569875.5
CDS CCA 72 bp CCGACTCATCTGCAGCTGGGGGTAACTGGAATTTCCTaGACAAGGGGCTGCCCTGTAGCTCCTCATCCTGGG +
Preference number: 6 (lower is better)
Translates to: PTHLQLGVTGIS*TRGCPVAPHPG
Trigger: CCCAGGATGAGGAGCTACAGGGCAGCCCCTTGTCCAGGAAATTCCAGTTACCCCCAGCTGCAGATGAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000563969.5
ENST00000565773.1
CDS CCA 72 bp GAGCAATGTCTCGGAAGGCCTTGTTCCCCACACCCATaGACACCATCTCAGCCATGCGCACCTCTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: EQCLGRPCSPHP*TPSQPCAPLGG
Trigger: TCCACCCAGAGGTGCGCATGGCTGAGATGGTGTCCATGGGTGTGGGGAACAAGGCCTTCCGAGACATTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562289.1
CDS CCA 72 bp TCCAGAGAGGCAATGTTCCTTGGAGCTGCAGGCTGCTaGATCTACTGCTCGTCCAGTCCCGGGCTCAGACTC +
Preference number: 6 (lower is better)
Translates to: SREAMFLGAAGC*IYCSSSPGLRL
Trigger: GAGTCTGAGCCCGGGACTGGACGAGCAGTAGATCCAGCAGCCTGCAGCTCCAAGGAACATTGCCTCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569875.5
CDS CAA 72 bp GGCCTGGCCCGACACTCCCCAGAATTTGTGGGAAGATaGTGGGAAGGTCAGCTCTGCGACCAGGAGAAGACC +
Preference number: 6 (lower is better)
Translates to: GLARHSPEFVGR*WEGQLCDQEKT
Trigger: GGTCTTCTCCTGGTCGCAGAGCTGACCTTCCCACAATCTTCCCACAAATTCTGGGGAGTGTCGGGCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp CTGGCCCGACACTCCCCAGAATTTGTGGGAAGATTGTaGGAAGGTCAGCTCTGCGACCAGGAGAAGACCCTG +
Preference number: 6 (lower is better)
Translates to: LARHSPEFVGRL*EGQLCDQEKTL
Trigger: CAGGGTCTTCTCCTGGTCGCAGAGCTGACCTTCCCACAATCTTCCCACAAATTCTGGGGAGTGTCGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp AGCAAATCTCCAGTCGGTGGCATGGCCCTGAGAGTCTaGGGACTCATCCCCATTCTCCAGGGGCCTTTCCAT +
Preference number: 6 (lower is better)
Translates to: SKSPVGGMALRV*GLIPILQGPFH
Trigger: ATGGAAAGGCCCCTGGAGAATGGGGATGAGTCCCCAGACTCTCAGGGCCATGCCACCGACTGGAGATTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360461.9
ENST00000379344.8
ENST00000393966.1
ENST00000427155.6
ENST00000450733.5
ENST00000562144.5
ENST00000562744.1
ENST00000563969.5
ENST00000565773.1
ENST00000565899.1
ENST00000567938.1
ENST00000568621.1
CDS TCA 72 bp GGGCGCCTGACACTGATCACACTACCCCTGCCCTCCTaGGGCTCCACATCTATGTATCCCATGGAAACCAGA +
Preference number: 6 (lower is better)
Translates to: GRLTLITLPLPS*GSTSMYPMETR
Trigger: TCTGGTTTCCATGGGATACATAGATGTGGAGCCTCAGGAGGGCAGGGGTAGTGTGATCAGTGTCAGGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS TCA 72 bp CTGATGAAAGCTACCCAAGTGGGTAGCTGTGCGATTTaGGGTCCCTTTAGGGCATGTGGGCCTGGCCCGACA +
Preference number: 6 (lower is better)
Translates to: LMKATQVGSCAI*GPFRACGPGPT
Trigger: TGTCGGGCCAGGCCCACATGCCCTAAAGGGACCTCAAATCGCACAGCTACCCACTTGGGTAGCTTTCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS TCA 72 bp TATCCAGAGACCCCTACTTGGACCCGGGCTTCAGCCTaGGTAGGGTCAGAGACCTCCAAAGTCTTGACACTC +
Preference number: 6 (lower is better)
Translates to: YPETPTWTRASA*VGSETSKVLTL
Trigger: GAGTGTCAAGACTTTGGAGGTCTCTGACCCTACTCAGGCTGAAGCCCGGGTCCAAGTAGGGGTCTCTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393966.1
ENST00000563969.5
CDS GCA 72 bp TTCTCCACTTACCTGCTGGGGGCGCTCCAGGAACTCTaGTCTTTGAGCCTCACCCTCCTCACCTGTAAAAAT +
Preference number: 6 (lower is better)
Translates to: FSTYLLGALQEL*SLSLTLLTCKN
Trigger: ATTTTTACAGGTGAGGAGGGTGAGGCTCAAAGAGCAGAGTTCCTGGAGCGCCCCCAGCAGGTAAGTGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp GGAAAGTCATTTTTCTCCTGGGGTTGCCGTGAGGACTaGGGAAGACTCCCTGTGTTATACGTTCACCCGCTG +
Preference number: 6 (lower is better)
Translates to: GKSFFSWGCRED*GRLPVLYVHPL
Trigger: CAGCGGGTGAACGTATAACACAGGGAGTCTTCCCCAGTCCTCACGGCAACCCCAGGAGAAAAATGACTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp CCTGAAAGGAGACAGAAGAGGCCGAGAGCTACAGGTTaGATGGCCCAGGATGGCAAAGGTACAGATAGAAAT +
Preference number: 6 (lower is better)
Translates to: PERRQKRPRATG*MAQDGKGTDRN
Trigger: ATTTCTATCTGTACCTTTGCCATCCTGGGCCATGCAACCTGTAGCTCTCGGCCTCTTCTGTCTCCTTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS GCA 72 bp GGGCTGGGCCCTGGTTTCTCCACTCCACAGAGAATGTaGATTGTAGGCTTCATGGAAACAGAGACTGTATGT +
Preference number: 6 (lower is better)
Translates to: GLGPGFSTPQRM*IVGFMETETVC
Trigger: ACATACAGTCTCTGTTTCCATGAAGCCTACAATGCACATTCTCTGTGGAGTGGAGAAACCAGGGCCCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp AAAGGAGACAGAAGAGGCCGAGAGCTACAGGTTGCATaGCCCAGGATGGCAAAGGTACAGATAGAAATGAGG +
Preference number: 6 (lower is better)
Translates to: KGDRRGRELQVA*PRMAKVQIEMR
Trigger: CCTCATTTCTATCTGTACCTTTGCCATCCTGGGCCATGCAACCTGTAGCTCTCGGCCTCTTCTGTCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp CCCTGCCCTCCTGAGGCTCCACATCTATGTATCCCATaGAAACCAGAGTCACAAATGGAGACAGATTCAGAG +
Preference number: 6 (lower is better)
Translates to: PCPPEAPHLCIP*KPESQMETDSE
Trigger: CTCTGAATCTGTCTCCATTTGTGACTCTGGTTTCCATGGGATACATAGATGTGGAGCCTCAGGAGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360461.9
ENST00000563969.5
CDS CCA 72 bp TTTCTAGTGCCAGGTGCTCTCCTCCCAACAATCCTGTaGGGCAGGTGCCATATTCCCCTTTTAAAGATGAGG +
Preference number: 6 (lower is better)
Translates to: FLVPGALLPTIL*GRCHIPLLKMR
Trigger: CCTCATCTTTAAAAGGGGAATATGGCACCTGCCCCACAGGATTGTTGGGAGGAGAGCACCTGGCACTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562289.1