RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120278

Ensembl transcript IDs: ENST00000358517.6, ENST00000367326.1, ENST00000475490.1, ENST00000643446.1, ENST00000643692.1, ENST00000644913.1, ENST00000644968.1, ENST00000644996.1

Found 666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGTTaGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAA +
Preference number: 1 (lower is better)
Translates to: CPIPAANDSSGPGSS*SFGRIPNSGGCMCK
Trigger: TTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
3UTR TCA 90 bp ATGTGTAGTTTAGGAAATAGATTCTTGCCCTATTCCTGCAGCCAATaGCTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCC +
Preference number: 1 (lower is better)
Translates to: MCSLGNRFLPYSCSQ*LLRARIKLVIWQNP
Trigger: GGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTCCTAAACTACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
3UTR GCA 90 bp ATGAAGACACTCAGCATGAGAAAATATACTGTTGATGCCAACATGTaGTACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGT +
Preference number: 1 (lower is better)
Translates to: MKTLSMRKYTVDANM*YSTIRAASSAISKS
Trigger: ACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTAGCACATGTTGGCATCAACAGTATATTTTCTCATGCTGAGTGTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR TCA 90 bp ACAGTAAGATACCCACTTACGTGCAGTGAGGTGTATTCCTATAGGTaGCATCAAAGTCATGCAACAAGACACTGGCGTGAAGAAGTAATT +
Preference number: 1 (lower is better)
Translates to: TVRYPLTCSEVYSYR*HQSHATRHWREEVI
Trigger: AATTACTTCTTCACGCCAGTGTCTTGTTGCATGACTTTGATGTCACCTATAGGAATACACCTCACTGCACGTAAGTGGGTATCTTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR CAA 90 bp TTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTaGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTCT +
Preference number: 2 (lower is better)
Translates to: FLQPMTPQGQDQVGH*AESQTQEGACAKRS
Trigger: AGAGCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR CAA 90 bp TTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTaGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTAT +
Preference number: 2 (lower is better)
Translates to: FLQPMTPQGQDQVGH*AESQTQEGACAKRY
Trigger: ATAGCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
3UTR-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCAGGAGGGTGCATGTaGAAAGCGCTCTGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSGGCM*KALWKG
Trigger: TCCTTTCCAGAGCGCTTTGCACATGCACCCTCCTGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACAGTACAATCCGGGCTaGATCGTCAGCCATTTCCAA +
Preference number: 2 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSQYNPG*IVSHFQ
Trigger: TTGGAAATGGCTGACGATGCAGCCCGGATTGTACTG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACATGTGCAAAGCGCTATaGAACATGAAGACACTCAGC +
Preference number: 2 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNMCKAL*NMKTLS
Trigger: GCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACAT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
3UTR-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGTTGATGCCAACATGTaGTACAGTACAATCCGGGCT +
Preference number: 2 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSVDANM*YSTIRA
Trigger: AGCCCGGATTGTACTGTAGCACATGTTGGCATCAAC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
3UTR-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACAGGATAAAACTACCTaGGCCTTCTGGATAACAGGA +
Preference number: 2 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSQDKTT*AFWITG
Trigger: TCCTGTTATCCAGAAGGCCCAGGTAGTTTTATCCTG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAACAAAAACCCTAAAATaGGCACCTCAGACTGCAGTC +
Preference number: 2 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSTKTLK*APQTAV
Trigger: GACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAGGATAAAACTACCTaGGCCTTCTGGATAACAGGA +
Preference number: 2 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQDKTT*AFWITG
Trigger: TCCTGTTATCCAGAAGGCCCAGGTAGTTTTATCCTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGCATTTCTTAAGGTGTaGGCACTATTGTCAGGTTAT +
Preference number: 2 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYAFLKV*ALLSGY
Trigger: ATAACCTGACAATAGTGCCCACACCTTAAGAAATGC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR CCA 72 bp CCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGTTaGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGC +
Preference number: 3 (lower is better)
Translates to: PAANDSSGPGSS*SFGRIPNSGGC
Trigger: GCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
3UTR TCA 72 bp TACCCACTTACGTGCAGTGAGGTGTATTCCTATAGGTaGCATCAAAGTCATGCAACAAGACACTGGCGTGAA +
Preference number: 3 (lower is better)
Translates to: YPLTCSEVYSYR*HQSHATRHWRE
Trigger: TTCACGCCAGTGTCTTGTTGCATGACTTTGATGTCACCTATAGGAATACACCTCACTGCACGTAAGTGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR CCA 72 bp CTCCTTGCTGCCTTTGAGTCACAGGATAAAACTACCTaGGCCTTCTGGATAACAGGAAAGGATTATTGCATT +
Preference number: 3 (lower is better)
Translates to: LLAAFESQDKTT*AFWITGKDYCI
Trigger: AATGCAATAATCCTTTCCTGTTATCCAGAAGGCCCAGGTAGTTTTATCCTGTGACTCAAAGGCAGCAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGGCAGTTGGCGCGGCTaGCTCTGCCAGCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRGSWRG*LCQPCS
Trigger: AGAGCAGGGCTGGCAGAGCCAGCCGCGCCAACTGCC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCCTCAAAGGGGCAGTTaGCGCGGCTGGCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRPQRGS*RGWLCQ
Trigger: CTGGCAGAGCCAGCCGCGCCAACTGCCCCTTTGAGG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCTTGGGTGCCCCGTTTaGGTCCACTCTCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNLGCPV*VHSPLR
Trigger: GCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGCTCGTGGCCGAGTCTaGGATCGTCTTGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSARGRV*DRLGCP
Trigger: GGGGCACCCAAGACGATCGCAGACTCGGCCACGAGC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTGGCGCGGCTGGCTCTaGCAGCCCTGCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHWRGWL*QPCSSR
Trigger: CCGTGAAGAGCAGGGCTGGCAGAGCCAGCCGCGCCA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCTGCCGAAGGAACCATaGCTGTCGCGGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNLPKEP*LSREEA
Trigger: GGCCTCTTCCCGCGACAGCCATGGTTCCTTCGGCAG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCGTTCTGTTGCCCCGTaGCGGGGTTGTCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNRSVAP*RGCPSA
Trigger: TGCAGAGGGACAACCCCGCCACGGGGCAACAGAACG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCCAGTTCCCCGTAGCTaGTCAGGTCTGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNPVPRS*SGLAPS
Trigger: GGAAGGGGCCAGACCTGACCAGCTACGGGGAACTGG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAGGAGACGGCCTTGCTaGAGACAGCTGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNRRRPC*RQLGRS
Trigger: GGATCTCCCCAGCTGTCTTCAGCAAGGCCGTCTCCT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGGGCTTCGTCCTCACTaGGCTGGAGGCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSGLRPH*AGGCLG
Trigger: CCCAAGACAGCCTCCAGCTCAGTGAGGACGAAGCCC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGTGGACCTGGGAAGGTaGCACAGACCTCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRVDLGR*HRPQEG
Trigger: TCCCTCCTGAGGTCTGTGTCACCTTCCCAGGTCCAC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGCTCGTGGCCGAGTCTaGGATCGTCTTGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSARGRV*DRLGCP
Trigger: GGGGCACCCAAGACGATCGCAGACTCGGCCACGAGC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGCTCACAGGAAACGCTaGCAGGAGACGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRAHRKR*QETVSG
Trigger: GCCAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACACCACGCTGCATCTCTaGACAGAGCCTGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNTTLHL*TEPGRG
Trigger: CCCTCTGCCAGGCTCTGTGCAGAGATGCAGCGTGGT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCAGGCAGCAGTTTCCTaGCTCTTCCGCCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRQAAVS*LFRPTK
Trigger: CTTGGTGGGGCGGAAGAGGCAGGAAACTGCTGCCTG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACGTTCTGTTGCCCCGTaGCGGGGTTGTCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRSVAP*RGCPSA
Trigger: TGCAGAGGGACAACCCCGCCACGGGGCAACAGAACG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGGAGCTTGGGGCTCGTaGCCGAGTCTGCGATCGTCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSGAWGS*PSLRSS
Trigger: AGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCCACATAGAGGAGCTTaGGGCTCGTGGCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRPHRGA*GSWPSL
Trigger: CAGACTCGGCCACGAGCCCCAAGCTCCTCTATGTGG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACCAGTTCCCCGTAGCTaGTCAGGTCTGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSPVPRS*SGLAPS
Trigger: GGAAGGGGCCAGACCTGACCAGCTACGGGGAACTGG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGCGTCCGCTCATTCTTaGCTCGCTGGATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRASAHS*LAGCGR
Trigger: CCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAACTCTGGGGTGCTCTTaGGGCGAACGGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSTLGCS*GERSPW
Trigger: CCAGGGACTCCGTTCGCCCCAAGAGCACCCCAGAGT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCTTGGGTGCCCCGTTTaGGTCCACTCTCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLGCPV*VHSPLR
Trigger: GCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGGAGACGGCCTTGCTaGAGACAGCTGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRRRPC*RQLGRS
Trigger: GGATCTCCCCAGCTGTCTTCAGCAAGGCCGTCTCCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTGCTCTTCACGGGCGTaGGGAGAGCCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHCSSRA*GEPGSQ
Trigger: CTGAGAGCCAGGCTCTCCTCACGCCCGTGAAGAGCA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATGCTCTTCACGGGCGTaGGGAGAGCCTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSCSSRA*GEPGSQ
Trigger: CTGAGAGCCAGGCTCTCCTCACGCCCGTGAAGAGCA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGTGGACCTGGGAAGGTaGCACAGACCTCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSVDLGR*HRPQEG
Trigger: TCCCTCCTGAGGTCTGTGTCACCTTCCCAGGTCCAC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCATCCGCGTTCTGTTaGCCCGTGGCGGGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSSAFC*PVAGLS
Trigger: GGACAACCCCGCCACGGGGCAACAGAACGCGGATGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTGGGTGGCCTTTCGCTaGCCTCATCCGCGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNWVAFR*PHPRSV
Trigger: AACAGAACGCGGATGAGGGCAGCGAAAGGCCACCCA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACAGGAGGGCATGTGTTaGTCTCCCCAGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSQEGMC*SPQHCW
Trigger: CCAGCAGTGCTGGGGAGAGCAACACATGCCCTCCTG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGGCTAACTCTGGGGTaGTCTTGGGGCGAACGGAGT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRRLTLG*SWGERS
Trigger: ACTCCGTTCGCCCCAAGAGCACCCCAGAGTTAGCCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCTCAGGGGTGCTCTCTaGGTGCAGCCTGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLRGAL*VQPVWH
Trigger: GTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACTCAGGGGTGCTCTCTaGGTGCAGCCTGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLRGAL*VQPVWH
Trigger: GTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTCAAGACGCAACTGGTaGCCATCTCCATCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSRRNW*PSPSQA
Trigger: GGCCTGGGATGGAGATGGGCACCAGTTGCGTCTTGA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCCACTGCGCTCTGGGTaGCCTTTCGCTGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHPLRSG*PFAALI
Trigger: GATGAGGGCAGCGAAAGGCCACCCAGAGCGCAGTGG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCTCTCCACTGCGCTCTaGGTGGCCTTTCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLSTAL*VAFRCP
Trigger: AGGGCAGCGAAAGGCCACCCAGAGCGCAGTGGAGAG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGGAAGAGGCCGAGGATaGTGTGGAACCGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSGRGRG*CGTEAD
Trigger: GTCAGCTTCGGTTCCACATCATCCTCGGCCTCTTCC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACGCCTGACAATCCTGTaGCCAGAGCTGGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRLTIL*PELEVS
Trigger: AGAGACCTCCAGCTCTGGTCACAGGATTGTCAGGCG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGCGGGGTTGTCCCTCTaGAGCTCGCTGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSAGLSL*SSLLEN
Trigger: GTTTTCCAGCAGCGAGCTGCAGAGGGACAACCCCGC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGCGGGGTTGTCCCTCTaGAGCTCGCTGCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHAGLSL*SSLLEN
Trigger: GTTTTCCAGCAGCGAGCTGCAGAGGGACAACCCCGC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCATCCTCATTCTCCTaGGGGGACCGTCGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSSSFS*GDRRLG
Trigger: TCCCAGCCGACGGTCCCCGCAGGAGAATGAGGATGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGCTCACAGGAAACGCTaGCAGGAGACGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSAHRKR*QETVSG
Trigger: GCCAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGGGTGCTCTCTGCGTaGAGCCTGTCTGGCACATCA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSGVLSA*SLSGTS
Trigger: TGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTGGCGCGGCTGGCTCTaGCAGCCCTGCTCTTCACGG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYWRGWL*QPCSSR
Trigger: CCGTGAAGAGCAGGGCTGGCAGAGCCAGCCGCGCCA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGGCACAGAGCAAGCTaGGGACAATTGCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRRHRAS*GQLPGS
Trigger: ACTCCCAGGCAATTGTCCGCAGCTTGCTCTGTGCCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATACCACGCTGCATCTCTaGACAGAGCCTGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHTTLHL*TEPGRG
Trigger: CCCTCTGCCAGGCTCTGTGCAGAGATGCAGCGTGGT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAGTCTGCGATCGTCTTaGGTGCCCCGTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNSLRSS*VPRLSP
Trigger: TGGACTCAAACGGGGCACCCAAGACGATCGCAGACT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACCACATAGAGGAGCTTaGGGCTCGTGGCCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSPHRGA*GSWPSL
Trigger: CAGACTCGGCCACGAGCCCCAAGCTCCTCTATGTGG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTGCTGGGATTTGGCCTaGACTGTGTGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRCWDLA*TVCCSL
Trigger: CAAGCTGCAGCACACAGTCCAGGCCAAATCCCAGCA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCATGCGTGCTTTGGCTaGATGCCTCTCCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRHACFG*MPLHLR
Trigger: TCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAGGCAGGGACAGCGTaGACACAGAGCGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQAGTA*TQSAPR
Trigger: ACGTGGGGCGCTCTGTGTCCACGCTGTCCCTGCCTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACAGGCAGGGACAGCGTaGACACAGAGCGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKQAGTA*TQSAPR
Trigger: ACGTGGGGCGCTCTGTGTCCACGCTGTCCCTGCCTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAATTTCTGATGCTGACTaGCCGGCGGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSISDAD*PAAAPA
Trigger: AGCTGGAGCAGCCGCCGGCCAGTCAGCATCAGAAAT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACAATCCTGGCACCAATaGCGGGCCCTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSQSWHQ*RALLAS
Trigger: AGAAGCAAGGAGGGCCCGCCATTGGTGCCAGGATTG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
3UTR CAA 72 bp CCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTaGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: PMTPQGQDQVGH*AESQTQEGACA
Trigger: TGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTCACCTCCACAAGCATaGGGTTGCCACACAGGATGT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSPPQA*GCHTGC
Trigger: ACATCCTGTGTGGCAACCTCATGCTTGTGGAGGTGA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACGGTCCAGATGTTTCTaGGAGCTCCACCCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRSRCF*ELHPLE
Trigger: TTCGAGCGGGTGGAGCTCTCAGAAACATCTGGACCG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp CATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTATGAAACACGGTCCAGATGTTTCTaGGAGCTCCACCCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: HLAESQTQEGACAKRYETRSRCF*ELHPLE
Trigger: TTCGAGCGGGTGGAGCTCTCAGAAACATCTGGACCG...TGTTTCATAGCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACAGCTTGCCTCTTTGTaGAGGCTAACTCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSQLASL*RLTLGC
Trigger: GCACCCCAGAGTTAGCCTTCACAAAGAGGCAAGCTG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGGTGGAGGCTGCAGTaGGCCAAGATTGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRWRLQ*AKIALQ
Trigger: TTGGAGTGCAATCTTGGCTCACTGCAGCCTCCACCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTCAAGACGCAACTGGTaGCCATCTCTGCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSRRNW*PSLLHS
Trigger: TGAGTGGAGCAGAGATGGGCACCAGTTGCGTCTTGA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTCATCCGCGTTCTGTTaGCCCGTGGCGGGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLSSAFC*PVAGLS
Trigger: GGACAACCCCGCCACGGGGCAACAGAACGCGGATGA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTGGGTGGCCTTTCGCTaGCCTCATCCGCGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHWVAFR*PHPRSV
Trigger: AACAGAACGCGGATGAGGGCAGCGAAAGGCCACCCA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTTGGCCTGGACTGTGTaGTGCAGCTTGGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNLAWTV*CSLGFL
Trigger: CAAGAATCCCAAGCTGCAGCACACAGTCCAGGCCAA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCAGAGGCGTTTGTCTTaGTGGGATTTGGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRQRRLS*WDLAWT
Trigger: AGTCCAGGCCAAATCCCAGCAAGACAAACGCCTCTG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTTTAGAGCCGAACAGTaGTTTCGTCCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNFRAEQ*FRPSLR
Trigger: CCTGAGGGAGGGACGAAAGCACTGTTCGGCTCTAAA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAACCGCTTGGAGTTCATaGGTGCTTTGGCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSTAWSS*VLWLDA
Trigger: GGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCTGGCACATCATCCTTaGTCACAGGAAACGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRLAHHP*SQETLP
Trigger: TGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGACTTACTACCACGCTaGATCTCTGCACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRDLLPR*ISAQSL
Trigger: CAGGCTCTGTGCAGAGATGCAGCGTGGTAGTAAGTC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTGCTGGAAAACGGCCTaGCAGGAATCAGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRCWKTA*QESAPV
Trigger: AACTGGAGCTGATTCCTGCCAGGCCGTTTTCCAGCA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTGCTGGAAAACGGCCTaGCAGGAATCAGCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNCWKTA*QESAPV
Trigger: AACTGGAGCTGATTCCTGCCAGGCCGTTTTCCAGCA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCTGCAGCTCGCTGCTaGAAAACGGCCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSAARC*KTAWQE
Trigger: TTCCTGCCAGGCCGTTTTCCAGCAGCGAGCTGCAGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCCACTGCGCTCTGGGTaGCCTTTCGCTGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLPLRSG*PFAALI
Trigger: GATGAGGGCAGCGAAAGGCCACCCAGAGCGCAGTGG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGTCTGCGATCGTCTTaGGTGCCCCGTTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSLRSS*VPRLSP
Trigger: TGGACTCAAACGGGGCACCCAAGACGATCGCAGACT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGGAGCTTGGGGCTCGTaGCCGAGTCTGCGATCGTCT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKGAWGS*PSLRSS
Trigger: AGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTCATTCTTGGCTCGCTaGATGCGGAAGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSFLAR*MRKVPS
Trigger: TGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATGCTGGGATTTGGCCTaGACTGTGTGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSCWDLA*TVCCSL
Trigger: CAAGCTGCAGCACACAGTCCAGGCCAAATCCCAGCA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTGTCTTGCTGGGATTTaGCCTGGACTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRCLAGI*PGLCAA
Trigger: TGCAGCACACAGTCCAGGCCAAATCCCAGCAAGACA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTGTCTTGCTGGGATTTaGCCTGGACTGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNCLAGI*PGLCAA
Trigger: TGCAGCACACAGTCCAGGCCAAATCCCAGCAAGACA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGGCGTTTGTCTTGCTaGGATTTGGCCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRRRLSC*DLAWTV
Trigger: CACAGTCCAGGCCAAATCCCAGCAAGACAAACGCCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAACTCTGGGGTGCTCTTaGGGCGAACGGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKTLGCS*GERSPW
Trigger: CCAGGGACTCCGTTCGCCCCAAGAGCACCCCAGAGT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCCTCAAAGGGGCAGTTaGCGCGGCTGGCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYPQRGS*RGWLCQ
Trigger: CTGGCAGAGCCAGCCGCGCCAACTGCCCCTTTGAGG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGACGTCCTATGCCCTaGATACTAGCGCAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRRPMP*ILAQRG
Trigger: ACCCCTCTGCGCTAGTATCCAGGGCATAGGACGTCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCACTTCAAGACGCAACTaGTGCCCATCTCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRTSRRN*CPSPSQ
Trigger: CTGGGATGGAGATGGGCACCAGTTGCGTCTTGAAGT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCGTCTGCCTTCAGCTaGTGCAGTGACCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSSAFS*CSDLSQ
Trigger: CTGACTGAGGTCACTGCATCAGCTGAAGGCAGACGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAATGTGGAACCGAAGCTaGCGGGTCGGTCACTATCAG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSMWNRS*RVGHYQ
Trigger: CTGATAGTGACCGACCCGTCAGCTTCGGTTCCACAT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATATGTGGAACCGAAGCTaGCGGGTCGGTCACTATCAG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHMWNRS*RVGHYQ
Trigger: CTGATAGTGACCGACCCGTCAGCTTCGGTTCCACAT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCCGCTTCATGTCATTaGTATGCCAGGCGACTCGCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSASCH*YARRLA
Trigger: AGCGAGTCGCCTGGCATATCAATGACATGAAGCGGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCACCTCCACAAGCATaGGGTTGCCACACAGGATGT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSPPQA*GCHTGC
Trigger: ACATCCTGTGTGGCAACCTCATGCTTGTGGAGGTGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAGGAGACGGCCTTGCTaGAGACAGCTGGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLRRRPC*RQLGRS
Trigger: GGATCTCCCCAGCTGTCTTCAGCAAGGCCGTCTCCT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGTAGAACTGCTAGGCTaGCTATTTCTCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNVELLG*LFLWAG
Trigger: TCCTGCCCAGAGAAATAGTCAGCCTAGCAGTTCTAC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGGGCTTCGTCCTCACTaGGCTGGAGGCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYGLRPH*AGGCLG
Trigger: CCCAAGACAGCCTCCAGCTCAGTGAGGACGAAGCCC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATTTTCTGGGTCTGTTTaGGACAGGCCACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSFSGSV*DRPLLA
Trigger: GGCCAACAGTGGCCTGTCTCAAACAGACCCAGAAAA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGCCTTCTTAATCTTCTaGCTGTACTGCCGAGCCATC +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRAFLIF*LYCRAI
Trigger: GATGGCTCGGCAGTACAGTCAGAAGATTAAGAAGGC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGCCCAGCCATCCTTCTaGATTTTCAAGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNAQPSF*IFKGDS
Trigger: AGAGTCTCCCTTGAAAATTCAGAAGGATGGCTGGGC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACAAGACGGAGGAAGATaGCTGGGACCTGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSQDGGR*LGPVIR
Trigger: CCTTATCACAGGTCCCAGTCATCTTCCTCCGTCTTG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGGCAGCAAGTCCTGGTaGCTCTCACACCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSGSKSW*LSHLEL
Trigger: AAGTTCAAGGTGTGAGAGTCACCAGGACTTGCTGCC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGGTGGAGGCTGCAGTaGGCCAAGATTGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRWRLQ*AKIALQ
Trigger: TTGGAGTGCAATCTTGGCTCACTGCAGCCTCCACCT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGCCTTTGCTAGTCTGTaGAGCGCCTTCCGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNAFASL*SAFRRN
Trigger: ATTTCTACGGAAGGCGCTGCACAGACTAGCAAAGGC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCTAAGGTCATTCTGCTaGCGAAGGAACCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRLRSFC*RRNHGC
Trigger: ACAGCCATGGTTCCTTCGGCAGCAGAATGACCTTAG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTGCCAGGCGACTCGCTaGATTGTGTCTATAGCATCA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNCQATR*IVSIAS
Trigger: TGATGCTATAGACACAATGCAGCGAGTCGCCTGGCA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATGTAACCGGACCGCGTaGTCGTGTTTCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSCNRTA*SCFRFM
Trigger: CATGAAGCGGAAACACGAGCACGCGGTCCGGTTACA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCTTGGCTCGCTGGATaGGGAAGGTTCCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSWLAG*GRFPQA
Trigger: TGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCTTGGCTCGCTGGATaGGGAAGGTTCCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSWLAG*GRFPQA
Trigger: TGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCCATCTGTCCCATATaGCAGCTGCAAGGGCGACTA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSICPI*QLQGRL
Trigger: TAGTCGCCCTTGCAGCTGGCATATGGGACAGATGGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATACCGCTTGGAGTTCATaGGTGCTTTGGCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHTAWSS*VLWLDA
Trigger: GGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGACTTACTACCACGCTaGATCTCTGCACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSDLLPR*ISAQSL
Trigger: CAGGCTCTGTGCAGAGATGCAGCGTGGTAGTAAGTC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAAAGACAGCAGCTGCTaGTTTCCCACATCACTAGGG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRKDSSC*FPTSLG
Trigger: CCCTAGTGATGTGGGAAAGCAGCAGCTGCTGTCTTT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCAGTACAATCCGGGCTaGATCGTCAGCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRQYNPG*IVSHFQ
Trigger: TTGGAAATGGCTGACGATGCAGCCCGGATTGTACTG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACGGGGAGGTGGAGGCTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKRGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAGCCTCCACCTCCCCG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGAGGGCAGGAACGCCTaGCTGTCGTCTTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLEGRNA*LSSWDV
Trigger: CACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGAGGGCAGGAACGCCTaGCTGTCGTCTTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKEGRNA*LSSWDV
Trigger: CACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCTGCCGAAGGAACCATaGCTGTCGCGGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLPKEP*LSREEA
Trigger: GGCCTCTTCCCGCGACAGCCATGGTTCCTTCGGCAG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCTCTCCACTGCGCTCTaGGTGGCCTTTCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLSTAL*VAFRCP
Trigger: AGGGCAGCGAAAGGCCACCCAGAGCGCAGTGGAGAG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCCAGTTCCCCGTAGCTaGTCAGGTCTGGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYPVPRS*SGLAPS
Trigger: GGAAGGGGCCAGACCTGACCAGCTACGGGGAACTGG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGCGTCCGCTCATTCTTaGCTCGCTGGATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLASAHS*LAGCGR
Trigger: CCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGCTGAGCGGCTCTTTTaGAATCACCTCCACAAGCAT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNAERLF*NHLHKH
Trigger: ATGCTTGTGGAGGTGATTCCAAAAGAGCCGCTCAGC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTGCTGGGATTTGGCCTaGACTGTGTGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHCWDLA*TVCCSL
Trigger: CAAGCTGCAGCACACAGTCCAGGCCAAATCCCAGCA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCTTGCTGAAGACAGCTaGGGAGATCCTTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRLAEDS*GDPSSL
Trigger: TAGAGAGGAAGGATCTCCCCAGCTGTCTTCAGCAAG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGCTGGAGGTCTCTGTaGACTCCATCTGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSWRSL*TPSVPY
Trigger: ATATGGGACAGATGGAGTCCACAGAGACCTCCAGCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGAGAGCCCTTACTGTaGCCAGCTTGCCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSREPLL*PACLFV
Trigger: CACAAAGAGGCAAGCTGGCCACAGTAAGGGCTCTCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGTTCATGCGTGCTTTaGCTGGATGCCTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSSCVL*LDASPP
Trigger: AGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTTCTCCTCAACCGCTTaGAGTTCATGCGTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRFSSTA*SSCVLW
Trigger: CCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCGTCCTCACTGAGCTaGAGGCTGTCTTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSSSLS*RLSWET
Trigger: TGTTTCCCAAGACAGCCTCCAGCTCAGTGAGGACGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAACCATGATCGGGAGTaGCCTGATGGTAAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSNHDRE*PDGKGL
Trigger: AAGCCCCTTACCATCAGGCCACTCCCGATCATGGTT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACAGGTCAGGGTTTTCTaGGTCTGTTTGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSQVRVF*VCLRQA
Trigger: GGCCTGTCTCAAACAGACCCAGAAAACCCTGACCTG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAATACTCAGCAATCCTaGCACCAATGGCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSNTQQS*HQWRAL
Trigger: GAGGGCCCGCCATTGGTGCCAGGATTGCTGAGTATT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCTCCACTACCATGGTaGACCTGGGAAGGTGACACA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSPLPW*TWEGDT
Trigger: TGTGTCACCTTCCCAGGTCCACCATGGTAGTGGAGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCGAGTCAGCAATATCTaGCAGCAAGTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNRVSNI*QQVLVT
Trigger: AGTCACCAGGACTTGCTGCCAGATATTGCTGACTCG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGGGCCAGGATCAAGTTaGTCATTTGGCAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNGPGSS*SFGRIP
Trigger: TGGGATTCTGCCAAATGACCAACTTGATCCTGGCCC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGCCAGTTATAGCAGGTaGATGCACAGTGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNASYSR*MHSVQG
Trigger: ACCTTGGACACTGTGCATCCACCTGCTATAACTGGC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACCGCCCCACCAAGAATaGCTCCATCTTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSPPHQE*LHLSFR
Trigger: TCTGAAGGAAAGATGGAGCCATTCTTGGTGGGGCGG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCTTCAGCTGATGCAGTaGCCTCAGTCAGGTAAAAGA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNLQLMQ*PQSGKR
Trigger: TCTTTTACCTGACTGAGGTCACTGCATCAGCTGAAG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATATTGTCTTCAGTTCTTaGGGGCAGGAACGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHIVFSS*GQERLA
Trigger: AGCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAAT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGGAAGAGGCCGAGGATaGTGTGGAACCGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLGRGRG*CGTEAD
Trigger: GTCAGCTTCGGTTCCACATCATCCTCGGCCTCTTCC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGTAGAACTGCTAGGCTaGCTATTTCTCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSVELLG*LFLWAG
Trigger: TCCTGCCCAGAGAAATAGTCAGCCTAGCAGTTCTAC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCGCCTGACAATCCTGTaGCCAGAGCTGGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLRLTIL*PELEVS
Trigger: AGAGACCTCCAGCTCTGGTCACAGGATTGTCAGGCG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGCCCAGCCATCCTTCTaGATTTTCAAGGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSAQPSF*IFKGDS
Trigger: AGAGTCTCCCTTGAAAATTCAGAAGGATGGCTGGGC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTTCTCTTTGTTGGGCTaGCTTACTACCACGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNFSLLG*LTTTLH
Trigger: ATGCAGCGTGGTAGTAAGTCAGCCCAACAAAGAGAA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCACCACAACTTTCTGTaGGTCTTGGAGTGTGAGATC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNHHNFL*VLECEI
Trigger: GATCTCACACTCCAAGACTCACAGAAAGTTGTGGTG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTGGACAATATTTTGTTaGTTGGGAGATGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRWTIFC*LGDGPL
Trigger: GAGGGGGCCATCTCCCAATCAACAAAATATTGTCCA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATGCCAGGCGACTCGCTaGATTGTGTCTATAGCATCA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSCQATR*IVSIAS
Trigger: TGATGCTATAGACACAATGCAGCGAGTCGCCTGGCA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTTGGCCTGGACTGTGTaGTGCAGCTTGGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLAWTV*CSLGFL
Trigger: CAAGAATCCCAAGCTGCAGCACACAGTCCAGGCCAA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACAGAGGCGTTTGTCTTaGTGGGATTTGGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSQRRLS*WDLAWT
Trigger: AGTCCAGGCCAAATCCCAGCAAGACAAACGCCTCTG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGCTGGAATCTTGGCTaGATGGTTCTCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSWNLG*MVLQNQ
Trigger: CTGATTCTGGAGAACCATGCAGCCAAGATTCCAGCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTTTAGAGCCGAACAGTaGTTTCGTCCCTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHFRAEQ*FRPSLR
Trigger: CCTGAGGGAGGGACGAAAGCACTGTTCGGCTCTAAA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCAGGAGGGCATGTGTTaGTCTCCCCAGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYQEGMC*SPQHCW
Trigger: CCAGCAGTGCTGGGGAGAGCAACACATGCCCTCCTG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGTTTTGGGGCTGTTCTaGAGTTCCCTAGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRVLGLF*SSLVLS
Trigger: TGACAGAACTAGGGAACTGCAGAACAGCCCCAAAAC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACTGGCACATCATCCTTaGTCACAGGAAACGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLAHHP*SQETLP
Trigger: TGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGGGGTGCTCTCTGCGTaGAGCCTGTCTGGCACATCA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYGVLSA*SLSGTS
Trigger: TGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAATGGCGGGCCCTCCTTaGTTCTTCTCTTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSMAGPP*FFSSKM
Trigger: CATCTTGGAAGAGAAGAAGCAAGGAGGGCCCGCCAT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATATGGCGGGCCCTCCTTaGTTCTTCTCTTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHMAGPP*FFSSKM
Trigger: CATCTTGGAAGAGAAGAAGCAAGGAGGGCCCGCCAT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGTTGATGCCAACATGTaGTACAGTACAATCCGGGCT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRVDANM*YSTIRA
Trigger: AGCCCGGATTGTACTGTAGCACATGTTGGCATCAAC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCAGGAGGGTGCATGTaGAAAGCGCTCTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSGGCM*KALWKG
Trigger: TCCTTTCCAGAGCGCTTTGCACATGCACCCTCCTGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCGGGGAGGTGGAGGCTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYRGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAGCCTCCACCTCCCCG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATACTTCAAGACGCAACTaGTGCCCATCTCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHTSRRN*CPSLLH
Trigger: GTGGAGCAGAGATGGGCACCAGTTGCGTCTTGAAGT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAGGGGAAGTTTTGTTTaGTCCCTGATGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNRGSFV*SLMQSR
Trigger: CCTTGACTGCATCAGGGACCAAACAAAACTTCCCCT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCACAGCCACGGACCTTaGATAGTTAGTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRHSHGP*IVSAIL
Trigger: CAGTATTGCACTAACTATCCAAGGTCCGTGGCTGTG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCATTCTTGGCTCGCTaGATGCGGAAGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSFLAR*MRKVPS
Trigger: TGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGCTGAGCGGCTCTTTTaGAATCACCTCCACAAGCAT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSAERLF*NHLHKH
Trigger: ATGCTTGTGGAGGTGATTCCAAAAGAGCCGCTCAGC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGGCGTTTGTCTTGCTaGGATTTGGCCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRRLSC*DLAWTV
Trigger: CACAGTCCAGGCCAAATCCCAGCAAGACAAACGCCT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGTTCATGCGTGCTTTaGCTGGATGCCTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSSCVL*LDASPP
Trigger: AGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACAGGTCAGGGTTTTCTaGGTCTGTTTGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSQVRVF*VCLRQA
Trigger: GGCCTGTCTCAAACAGACCCAGAAAACCCTGACCTG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAATTTCTGATGCTGACTaGCCGGCGGCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKISDAD*PAAAPA
Trigger: AGCTGGAGCAGCCGCCGGCCAGTCAGCATCAGAAAT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAATCCTGGCACCAATaGCGGGCCCTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQSWHQ*RALLAS
Trigger: AGAAGCAAGGAGGGCCCGCCATTGGTGCCAGGATTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACACCAGTTCTCTTTGTTaGGCTGACTTACTACCACGC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNTSSLC*ADLLPR
Trigger: GCGTGGTAGTAAGTCAGCCCAACAAAGAGAACTGGT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTTGTTGATTGGGAGATaGCCCCCTCCAAAGATAGTC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNLLIGR*PPPKIV
Trigger: GACTATCTTTGGAGGGGGCCATCTCCCAATCAACAA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGGGCCAGGATCAAGTTaGTCATTTGGCAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSGPGSS*SFGRIP
Trigger: TGGGATTCTGCCAAATGACCAACTTGATCCTGGCCC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCGCCTGTGATGCTTTaGCCCAGAACACGATTTGTC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSPVML*PRTRFV
Trigger: GACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNNFGYS*WHFKTQ
Trigger: TTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGTTTTGTTTGGTCCCTaGTGCAGTCAAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNVLFGP*CSQGNP
Trigger: AGGATTACCTTGACTGCATCAGGGACCAAACAAAAC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGTTTCCAAAAAGGGCTaGTCTTTCTTCGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSVSKKG*SFFGPQ
Trigger: CTGGGGACCGAAGAAAGATCAGCCCTTTTTGGAAAC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATTTCCTGACGCTCCCTaGAGAATTTGGCCAGTATCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSFPDAP*RIWPVS
Trigger: AGATACTGGCCAAATTCTTCAGGGAGCGTCAGGAAA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTTGCCACACAGGATGTaGGCTTTGTATGTAAACGTG +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNLPHRM*ALYVNV
Trigger: CACGTTTACATACAAAGCTCACATCCTGTGTGGCAA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCGGTCCAGATGTTTCTaGGAGCTCCACCCGCTCGAA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYRSRCF*ELHPLE
Trigger: TTCGAGCGGGTGGAGCTCTCAGAAACATCTGGACCG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATTGGAGTGTGAGATCTaGGAGTTTTTCAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSLECEI*EFFSAL
Trigger: CAGGGCACTGAAAAACTCTCAGATCTCACACTCCAA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATTCCTTCTACGATTGTaGGATAGCTCCAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSFLLRL*DSSNSD
Trigger: GTCGGAGTTGGAGCTATCTCACAATCGTAGAAGGAA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACTGCTTACCTTTAAATaGAGAGCCCAGGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLLTFK*RAQAPF
Trigger: GAAAGGGGCCTGGGCTCTTCATTTAAAGGTAAGCAG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGTTGTGCTGATCTGGTaGTCGGTCCAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSVVLIW*SVQMFL
Trigger: CAGAAACATCTGGACCGATCACCAGATCAGCACAAC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACTAAGGTCATTCTGCTaGCGAAGGAACCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLRSFC*RRNHGC
Trigger: ACAGCCATGGTTCCTTCGGCAGCAGAATGACCTTAG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTTCATGTCATTGATATaGCAGGCGACTCGCTGCATT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNFMSLI*QATRCI
Trigger: AATGCAGCGAGTCGCCTGGCATATCAATGACATGAA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTGTAACCGGACCGCGTaGTCGTGTTTCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLCNRTA*SCFRFM
Trigger: CATGAAGCGGAAACACGAGCACGCGGTCCGGTTACA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGCTGGAATCTTGGCTaGATGGTTCTCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSWNLG*MVLQNQ
Trigger: CTGATTCTGGAGAACCATGCAGCCAAGATTCCAGCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCTCCACCTGAGAGGGTaGCATCTGTTTGTGCGTAAA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLHLRG*HLFVRK
Trigger: TTTACGCACAAACAGATGGCACCCTCTCAGGTGGAG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCAAGCTGCGGACAATTaGCTGGGAGTACTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNQAADN*LGVLFV
Trigger: TACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTTG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAGGCACAGAGCAAGCTaGGGACAATTGCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLRHRAS*GQLPGS
Trigger: ACTCCCAGGCAATTGTCCGCAGCTTGCTCTGTGCCT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACTGAGAGTTTTTCAGTaGCCTGTTGATGCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSLRVFQ*PVDASQ
Trigger: CTGACTCGCATCAACAGGGCACTGAAAAACTCTCAG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGGACTATTCAAAGAATaGAATGTGTTGCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNGLFKE*NVLPLQ
Trigger: CTGCAGCGGCAACACATTGCATTCTTTGAATAGTCC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCATGGGCACCTCAGACTaGAGTCCAATTTACAGATCT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRMGTSD*SPIYRS
Trigger: AGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCAT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACATGGGCACCTCAGACTaGAGTCCAATTTACAGATCT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNMGTSD*SPIYRS
Trigger: AGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCAT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCCAAACTCAGGAGGGTaGATGTGCAAAGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLPNSGG*MCKALW
Trigger: CCAGAGCGCTTTGCACATGCACCCTCCTGAGTTTGG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGTTATAGCAGGTGGATaGACAGTGTCCAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNVIAGG*TVSKVF
Trigger: GAAAACCTTGGACACTGTGCATCCACCTGCTATAAC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGCCTGGCTGTCGTCTTaGGATGTGGAACTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHAWLSS*DVELWL
Trigger: TAACCAAAGTTCCACATCCCAAGACGACAGCCAGGC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCAGCTCCAGTTTTATaGCCCCTACCTCCTTATCCT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSAPVL*PLPPYP
Trigger: AGGATAAGGAGGTAGGGGCCATAAAACTGGAGCTGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATAGCTGGAGGTCTCTGTaGACTCCATCTGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSWRSL*TPSVPY
Trigger: ATATGGGACAGATGGAGTCCACAGAGACCTCCAGCT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACATGCGTGCTTTGGCTaGATGCCTCTCCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKHACFG*MPLHLR
Trigger: TCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAGCGACGGAGGATCTaGGAGCCCTATGGTGTCATA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQRRRI*EPYGVI
Trigger: TATGACACCATAGGGCTCCCAGATCCTCCGTCGCTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGTCTTGGGAAACAAATaGCCTCAGGCTGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHVLGNK*PQAVTA
Trigger: TGCTGTGACAGCCTGAGGCCATTTGTTTCCCAAGAC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGTCTTGGGAAACAAATaGCCTCAGGCTGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSVLGNK*PQAVTA
Trigger: TGCTGTGACAGCCTGAGGCCATTTGTTTCCCAAGAC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGAGACAGGCCACTGTTaGCCAGGTCGTAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKETGHC*PGRRDC
Trigger: ACAATCCCTACGACCTGGCCAACAGTGGCCTGTCTC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAATACTCAGCAATCCTaGCACCAATGGCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKNTQQS*HQWRAL
Trigger: GAGGGCCCGCCATTGGTGCCAGGATTGCTGAGTATT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACTACCATGGTGGACCTaGGAAGGTGACACAGACCTC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKLPWWT*EGDTDL
Trigger: GAGGTCTGTGTCACCTTCCCAGGTCCACCATGGTAG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACAGTCTCCACTACCATaGTGGACCTGGGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKQSPLP*WTWEGD
Trigger: GTCACCTTCCCAGGTCCACCATGGTAGTGGAGACTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCCTCAAGTCTTGCTCTaGTGGGAGACAGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHPQVLL*WETEIC
Trigger: GCAGATTTCTGTCTCCCACCAGAGCAAGACTTGAGG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACGAGTCAGCAATATCTaGCAGCAAGTCCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRVSNI*QQVLVT
Trigger: AGTCACCAGGACTTGCTGCCAGATATTGCTGACTCG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCACAAAAACCCTAAAATaGGCACCTCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRTKTLK*APQTAV
Trigger: GACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGCGAAACAGCTTTCCTaGGACAAGAGTCAGGTAATT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNAKQLS*DKSQVI
Trigger: AATTACCTGACTCTTGTCCCAGGAAAGCTGTTTCGC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSNFGYS*WHFKTQ
Trigger: TTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTTCCTGACGCTCCCTaGAGAATTTGGCCAGTATCT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSFPDAP*RIWPVS
Trigger: AGATACTGGCCAAATTCTTCAGGGAGCGTCAGGAAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATCCGCTTCATGTCATTaGTATGCCAGGCGACTCGCT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSASCH*YARRLA
Trigger: AGCGAGTCGCCTGGCATATCAATGACATGAAGCGGA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGAAACAAGGCTTGCCTaGTCTGGTGATCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKETRLA*SGDRSR
Trigger: TCTGGACCGATCACCAGATCAGGCAAGCCTTGTTTC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGTCAACTCTATGGATaGCCCAAAGGGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSQLYG*PKGSHL
Trigger: GAGATGACTCCCTTTGGGTCATCCATAGAGTTGACT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAACGGAGTCCCTGGCTaGTTTAGAGGGAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLNGVPG*FRGSGF
Trigger: GAATCCACTCCCTCTAAATCAGCCAGGGACTCCGTT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATAAACGTGGGATATCTTaGCCTCAAGTCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHKRGIS*PQVLLW
Trigger: CCAGAGCAAGACTTGAGGTCAAGATATCCCACGTTT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTCTCTTTGTTGGGCTaGCTTACTACCACGCTGCAT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSFSLLG*LTTTLH
Trigger: ATGCAGCGTGGTAGTAAGTCAGCCCAACAAAGAGAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAAGACGGAGGAAGATaGCTGGGACCTGTGATAAGG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQDGGR*LGPVIR
Trigger: CCTTATCACAGGTCCCAGTCATCTTCCTCCGTCTTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTTGGAGTGTGAGATCTaGGAGTTTTTCAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLECEI*EFFSAL
Trigger: CAGGGCACTGAAAAACTCTCAGATCTCACACTCCAA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGCATCCACAAACTTTaGGTCAGATTTCCTTCTACG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSIHKL*VRFPST
Trigger: CGTAGAAGGAAATCTGACTCAAAGTTTGTGGATGCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTGTAACCGGACCGCGTaGTCGTGTTTCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYCNRTA*SCFRFM
Trigger: CATGAAGCGGAAACACGAGCACGCGGTCCGGTTACA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATTGGCCTGGACTGTGTaGTGCAGCTTGGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKLAWTV*CSLGFL
Trigger: CAAGAATCCCAAGCTGCAGCACACAGTCCAGGCCAA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCATTTCAAGGATTGCTTaGTTGGCCTTAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRISRIA*LALAGI
Trigger: GATTCCAGCTAAGGCCAAGCAAGCAATCCTTGAAAT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTCCATCTGTCCCATATaGCAGCTGCAAGGGCGACTA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLSICPI*QLQGRL
Trigger: TAGTCGCCCTTGCAGCTGGCATATGGGACAGATGGA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGTTTTGGGGCTGTTCTaGAGTTCCCTAGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSVLGLF*SSLVLS
Trigger: TGACAGAACTAGGGAACTGCAGAACAGCCCCAAAAC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTACTGTGGCCAGCTTaGCTCTTTGTGAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLLWPA*LFVKAN
Trigger: GTTAGCCTTCACAAAGAGGCAAGCTGGCCACAGTAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGCAATGTGTTGCCGCTaGAGACATTATCAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNAMCCR*RHYQKS
Trigger: ACTTTTCTGATAATGTCTGCAGCGGCAACACATTGC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAAGAATGCAATGTGTTaGCGCTGCAGACATTATCAG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRKNAMC*RCRHYQ
Trigger: CTGATAATGTCTGCAGCGGCAACACATTGCATTCTT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAACAGGTAAAGGGTTCTaGGTACAGAAAATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSTGKGF*VQKMGP
Trigger: GGGACCCATTTTCTGTACGCAGAACCCTTTACCTGT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGATACCCACTTACGTaGAGTGAGGTGTATTCCTAT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRRYPLT*SEVYSY
Trigger: ATAGGAATACACCTCACTGCACGTAAGTGGGTATCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCAAAACACTCTGCTATaGCCACAGGATCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNQNTLL*PQDHFH
Trigger: GTGAAAATGATCCTGTGGCCATAGCAGAGTGTTTTG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGGAACTCTTCACTCTTaGACACAAAACACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNGTLHS*TQNTLL
Trigger: TAGCAGAGTGTTTTGTGTCCAAGAGTGAAGAGTTCC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCACAGCCACGGACCTTaGATAGTTAGTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHHSHGP*IVSAIL
Trigger: CAGTATTGCACTAACTATCCAAGGTCCGTGGCTGTG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTGCGTCCGCTCATTCTTaGCTCGCTGGATGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCASAHS*LAGCGR
Trigger: CCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGC...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp CATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTATGAAACACTGTGTGCTGCAGCTTaGGATTCTTGTAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HLAESQTQEGACAKRYETLCAAA*DSCSGR
Trigger: TCTTCCACTACAAGAATCCCAAGCTGCAGCACACAG...TGTTTCATAGCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAATCTTGGCTGCATaGTTCTCCAGAATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSGILAA*FSRISL
Trigger: GAGACTGATTCTGGAGAACCATGCAGCCAAGATTCC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGGAATCTTGGCTGCATaGTTCTCCAGAATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHGILAA*FSRISL
Trigger: GAGACTGATTCTGGAGAACCATGCAGCCAAGATTCC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTTGCTTGGCCTTAGCTaGAATCTTGGCTGCATGGTT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLLGLS*NLGCMV
Trigger: AACCATGCAGCCAAGATTCCAGCTAAGGCCAAGCAA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTGCTTGGCCTTAGCTaGAATCTTGGCTGCATGGTT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLLGLS*NLGCMV
Trigger: AACCATGCAGCCAAGATTCCAGCTAAGGCCAAGCAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGCCTGGATGATGAATaGCATCCATTTCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSLDDE*HPFQGL
Trigger: CAATCCTTGAAATGGATGCCATTCATCATCCAGGCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCACTGTAACAGAAGCCTaGATGATGAATGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRTVTEA*MMNGIH
Trigger: ATGGATGCCATTCATCATCCAGGCTTCTGTTACAGT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCTTCTCAGCCGATATaGAGCAGAACCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNSSQPI*SRTFFR
Trigger: TCTAAAGAAGGTTCTGCTCCATATCGGCTGAGAAGA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAGAGAGCCCTTACTGTaGCCAGCTTGCCTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLREPLL*PACLFV
Trigger: CACAAAGAGGCAAGCTGGCCACAGTAAGGGCTCTCT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGATCTGGGAGCCCTATaGTGTCATAGATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHDLGAL*CHRCSP
Trigger: AGGAGAACATCTATGACACCATAGGGCTCCCAGATC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGAGACAGGCCACTGTTaGCCAGGTCGTAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYETGHC*PGRRDC
Trigger: ACAATCCCTACGACCTGGCCAACAGTGGCCTGTCTC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATCTCCACTACCATGGTaGACCTGGGAAGGTGACACA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSPLPW*TWEGDT
Trigger: TGTGTCACCTTCCCAGGTCCACCATGGTAGTGGAGA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCAGTCTCCACTACCATaGTGGACCTGGGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYQSPLP*WTWEGD
Trigger: GTCACCTTCCCAGGTCCACCATGGTAGTGGAGACTG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCAATATTTTGTTGATTaGGAGATGGCCCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNQYFVD*EMAPSK
Trigger: TTTGGAGGGGGCCATCTCCCAATCAACAAAATATTG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGCAGAAGTTCACTATTaGAGTGGTAGATATCCTGTA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRAEVHY*SGRYPV
Trigger: TACAGGATATCTACCACTTCAATAGTGAACTTCTGC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTCACCTCCACAAGCATaGGGTTGCCACACAGGATGT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYSPPQA*GCHTGC
Trigger: ACATCCTGTGTGGCAACCTCATGCTTGTGGAGGTGA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGAAACAAGGCTTGCCTaGTCTGGTGATCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYETRLA*SGDRSR
Trigger: TCTGGACCGATCACCAGATCAGGCAAGCCTTGTTTC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTTTCTGGGTCTGTTTaGGACAGGCCACTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYFSGSV*DRPLLA
Trigger: GGCCAACAGTGGCCTGTCTCAAACAGACCCAGAAAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCCATTACTATAGGTTaGATGCAGAAGCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSITIG*MQKPVS
Trigger: GGAGACTGGCTTCTGCATTCAACCTATAGTAATGGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTTTCAGTGCCCTGTTaGTGCGAGTCAGCAATATCT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSFSVPC*CESAIS
Trigger: AGATATTGCTGACTCGCATCAACAGGGCACTGAAAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTTTTCAGTGCCCTGTTaGTGCGAGTCAGCAATATCT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHFSVPC*CESAIS
Trigger: AGATATTGCTGACTCGCATCAACAGGGCACTGAAAA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATGGTGTCAGATATGGTaGAAGGCCAAGTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSWCQIW*KAKFAV
Trigger: AACAGCAAACTTGGCCTTTCACCATATCTGACACCA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCTTGAACTGAGACACTaGAATTTTTCCCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNLELRH*NFSLRD
Trigger: GTCTCTAAGGGAAAAATTTCAGTGTCTCAGTTCAAG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCACAAAGGCCACCGCTTaGGAAAGCATTCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLTKATA*ESILAA
Trigger: TGCAGCAAGAATGCTTTCTCAAGCGGTGGCCTTTGT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCTGCTTACCTTTAAATaGAGAGCCCAGGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLLLTFK*RAQAPF
Trigger: GAAAGGGGCCTGGGCTCTTCATTTAAAGGTAAGCAG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCTTTTGGATGTCTTGTaGTGTTTCACTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRLLDVL*CFTGLQ
Trigger: TTGAAGACCAGTGAAACAGCACAAGACATCCAAAAG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACTCCACCTGAGAGGGTaGCATCTGTTTGTGCGTAAA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKLHLRG*HLFVRK
Trigger: TTTACGCACAAACAGATGGCACCCTCTCAGGTGGAG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCTTGGAGTTCATGCGTaGTTTGGCTGGATGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLGVHA*FGWMPL
Trigger: GAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACCAGACCCAAAAAGGTaGTCCGCTTTGCACGCTTTA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKPDPKR*SALHAL
Trigger: TAAAGCGTGCAAAGCGGAGCACCTTTTTGGGTCTGG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATGTAAAGACAGCAGCTaGTGCTTTCCCACATCACTA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSCKDSS*CFPTSL
Trigger: TAGTGATGTGGGAAAGCAGCAGCTGCTGTCTTTACA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAGTACAATCCGGGCTaGATCGTCAGCCATTTCCAA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQYNPG*IVSHFQ
Trigger: TTGGAAATGGCTGACGATGCAGCCCGGATTGTACTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAATGTTCCCAGACCATaGTATTCAATGTGGACTTTC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNNVPRP*YSMWTF
Trigger: GAAAGTCCACATTGAATAGCATGGTCTGGGAACATT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGATACCCACTTACGTaGAGTGAGGTGTATTCCTAT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRYPLT*SEVYSY
Trigger: ATAGGAATACACCTCACTGCACGTAAGTGGGTATCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATGGGATGTGGAACTTTaGTTACAGCTGATGGCACTT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSWDVEL*LQLMAL
Trigger: AAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGCTGAGCGGCTCTTTTaGAATCACCTCCACAAGCAT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKAERLF*NHLHKH
Trigger: ATGCTTGTGGAGGTGATTCCAAAAGAGCCGCTCAGC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACAGGCGTTTGTCTTGCTaGGATTTGGCCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYRRLSC*DLAWTV
Trigger: CACAGTCCAGGCCAAATCCCAGCAAGACAAACGCCT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCTTCTCAGCCGATATaGAGCAGAACCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSSQPI*SRTFFR
Trigger: TCTAAAGAAGGTTCTGCTCCATATCGGCTGAGAAGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTTCTCCTCAACCGCTTaGAGTTCATGCGTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLFSSTA*SSCVLW
Trigger: CCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTCGTCCTCACTGAGCTaGAGGCTGTCTTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYSSSLS*RLSWET
Trigger: TGTTTCCCAAGACAGCCTCCAGCTCAGTGAGGACGA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACAACCATGATCGGGAGTaGCCTGATGGTAAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYNHDRE*PDGKGL
Trigger: AAGCCCCTTACCATCAGGCCACTCCCGATCATGGTT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAACTTTCTGTGAGTCTTaGAGTGTGAGATCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSTFCES*SVRSES
Trigger: ACTCTCAGATCTCACACTCCAAGACTCACAGAAAGT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCAGGATAAAACTACCTaGGCCTTCTGGATAACAGGA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHQDKTT*AFWITG
Trigger: TCCTGTTATCCAGAAGGCCCAGGTAGTTTTATCCTG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATTTCCTGACGCTCCCTaGAGAATTTGGCCAGTATCT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKFPDAP*RIWPVS
Trigger: AGATACTGGCCAAATTCTTCAGGGAGCGTCAGGAAA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAGTCAACTCTATGGATaGCCCAAAGGGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSQLYG*PKGSHL
Trigger: GAGATGACTCCCTTTGGGTCATCCATAGAGTTGACT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCAGATACAGGCTTATaGGGCATAGACAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSDTGL*GIDKLP
Trigger: TGGTAACTTGTCTATGCCTCATAAGCCTGTATCTGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCAAGGGAGACTCTCTaGATACAATCTGGTCATACA +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSRETL*IQSGHT
Trigger: TGTATGACCAGATTGTATTCAGAGAGTCTCCCTTGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCAAGGGAGACTCTCTaGATACAATCTGGTCATACA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSRETL*IQSGHT
Trigger: TGTATGACCAGATTGTATTCAGAGAGTCTCCCTTGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAAACGTGGGATATCTTaGCCTCAAGTCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKKRGIS*PQVLLW
Trigger: CCAGAGCAAGACTTGAGGTCAAGATATCCCACGTTT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGAGTACTTTTTGTATTaGTCTCAAACGTGGGATATC +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNEYFLY*SQTWDI
Trigger: GATATCCCACGTTTGAGATCAATACAAAAAGTACTC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGAGTACTTTTTGTATTaGTCTCAAACGTGGGATATC +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKREYFLY*SQTWDI
Trigger: GATATCCCACGTTTGAGATCAATACAAAAAGTACTC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACACCACAACTTTCTGTaGGTCTTGGAGTGTGAGATC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKHHNFL*VLECEI
Trigger: GATCTCACACTCCAAGACTCACAGAAAGTTGTGGTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGGGTAAATTTCTATTaGCCACCACAACTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRVNFY*PPQLSV
Trigger: CACAGAAAGTTGTGGTGGTCAATAGAAATTTACCCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATTCCTTCTACGATTGTaGGATAGCTCCAACTCCGAC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKFLLRL*DSSNSD
Trigger: GTCGGAGTTGGAGCTATCTCACAATCGTAGAAGGAA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCAAAGCTGCTTGAACTaGGACACTGAAATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHQSCLN*DTEIFP
Trigger: GGGAAAAATTTCAGTGTCTCAGTTCAAGCAGCTTTG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACACAAAGGCCACCGCTTaGGAAAGCATTCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYTKATA*ESILAA
Trigger: TGCAGCAAGAATGCTTTCTCAAGCGGTGGCCTTTGT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAACTCAGGGTTCAAGTTaGACAGCATCATTGAACACT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSTQGSS*TASLNT
Trigger: AGTGTTCAATGATGCTGTTCAACTTGAACCCTGAGT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTATTTCACTCGCCTGTaGTGCTTTGGCCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYYFTRL*CFGPEH
Trigger: GTGTTCTGGGCCAAAGCATCACAGGCGAGTGAAATA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR GCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTTCTTGGCTCGCTGGATaGGGAAGGTTCCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCSWLAG*GRFPQA
Trigger: TGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGA...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAGCTGGAATCTTGGCTaGATGGTTCTCCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSWNLG*MVLQNQ
Trigger: CTGATTCTGGAGAACCATGCAGCCAAGATTCCAGCT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATATTTCAAGGATTGCTTaGTTGGCCTTAGCTGGAATC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHISRIA*LALAGI
Trigger: GATTCCAGCTAAGGCCAAGCAAGCAATCCTTGAAAT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTTACTGTGGCCAGCTTaGCTCTTTGTGAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLLLWPA*LFVKAN
Trigger: GTTAGCCTTCACAAAGAGGCAAGCTGGCCACAGTAA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCCAGACCCAAAAAGGTaGTCCGCTTTGCACGCTTTA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYPDPKR*SALHAL
Trigger: TAAAGCGTGCAAAGCGGAGCACCTTTTTGGGTCTGG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACAAAGACAGCAGCTGCTaGTTTCCCACATCACTAGGG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYKDSSC*FPTSLG
Trigger: CCCTAGTGATGTGGGAAAGCAGCAGCTGCTGTCTTT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATAAGAATGCAATGTGTTaGCGCTGCAGACATTATCAG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHKNAMC*RCRHYQ
Trigger: CTGATAATGTCTGCAGCGGCAACACATTGCATTCTT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCACAGGTAAAGGGTTCTaGGTACAGAAAATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLTGKGF*VQKMGP
Trigger: GGGACCCATTTTCTGTACGCAGAACCCTTTACCTGT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAATCAAAAAGCGAAAATaGGAAACAGCTTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSIKKRK*ETAFLG
Trigger: TCCCAGGAAAGCTGTTTCGCATTTTCGCTTTTTGAT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACCTACCTCCTTATCCTaGTTAAACAAGCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKPTSLS*LNKPMW
Trigger: CCACATGGGCTTGTTTAACCAGGATAAGGAGGTAGG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTCAGCTCCAGTTTTATaGCCCCTACCTCCTTATCCT +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLSAPVL*PLPPYP
Trigger: AGGATAAGGAGGTAGGGGCCATAAAACTGGAGCTGA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAGGGGAAGTTTTGTTTaGTCCCTGATGCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKRGSFV*SLMQSR
Trigger: CCTTGACTGCATCAGGGACCAAACAAAACTTCCCCT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGAGAATCCGCTGAACTaGTTTCAAGAGATAGGACCC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKENPLN*FQEIGP
Trigger: GGGTCCTATCTCTTGAAACCAGTTCAGCGGATTCTC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCTGTGTGCTGCAGCTTaGGATTCTTGTAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLLCAAA*DSCSGR
Trigger: TCTTCCACTACAAGAATCCCAAGCTGCAGCACACAG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATACTGTAACAGAAGCCTaGATGATGAATGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHTVTEA*MMNGIH
Trigger: ATGGATGCCATTCATCATCCAGGCTTCTGTTACAGT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCTCTAGAAACCTTTTaGATGTCTTGTGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNSLETF*MSCAVS
Trigger: TGAAACAGCACAAGACATCCAAAAGGTTTCTAGAGA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTCTCTAGAAACCTTTTaGATGTCTTGTGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSLETF*MSCAVS
Trigger: TGAAACAGCACAAGACATCCAAAAGGTTTCTAGAGA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCTTGCTGAAGACAGCTaGGGAGATCCTTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLAEDS*GDPSSL
Trigger: TAGAGAGGAAGGATCTCCCCAGCTGTCTTCAGCAAG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACCAGGAGACGGTCTCTaGCCTTGTCTTCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKPGDGL*PCLHFS
Trigger: AGAAAAATGAAGACAAGGCCAGAGACCGTCTCCTGG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAATCTGGTCATACAACTaGGAATACTCAGCAATCCTG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSIWSYN*EYSAIL
Trigger: CAGGATTGCTGAGTATTCCCAGTTGTATGACCAGAT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCCTCAAGTCTTGCTCTaGTGGGAGACAGAAATCTGC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYPQVLL*WETEIC
Trigger: GCAGATTTCTGTCTCCCACCAGAGCAAGACTTGAGG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAACCAGTTCTCTTTGTTaGGCTGACTTACTACCACGC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKTSSLC*ADLLPR
Trigger: GCGTGGTAGTAAGTCAGCCCAACAAAGAGAACTGGT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCTGCGTACAGAAAATaGGTCCCGCTACATTTTAAT +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSAYRK*VPLHFN
Trigger: ATTAAAATGTAGCGGGACCCATTTTCTGTACGCAGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCCACAAAATGGTCTGGTaGGATTTCAGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QVGHLAESQTQEGACAKRHKMVW*DFSFAF
Trigger: AAAAGCAAAACTGAAATCCCACCAGACCATTTTGTG...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGCACACAAAATGGTCTaGTGGGATTTCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHAHKMV*WDFSFA
Trigger: AGCAAAACTGAAATCCCACCAGACCATTTTGTGTGC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATAACAGGCACACAAAATaGTCTGGTGGGATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHNRHTK*SGGISV
Trigger: AACTGAAATCCCACCAGACCATTTTGTGTGCCTGTT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACATGAGAAGAATACTTTaGAGAAGCAAGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNMRRIL*RSKKLG
Trigger: CCCAAGTTTCTTGCTTCTCCAAAGTATTCTTCTCAT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGATTGCACTCCAACTTaGGCAACAGGGAGAGACTCA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYDCTPT*ATGRDS
Trigger: TGAGTCTCTCCCTGTTGCCCAAGTTGGAGTGCAATC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGTTTTGTTTGGTCCCTaGTGCAGTCAAGGTAATCCT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKVLFGP*CSQGNP
Trigger: AGGATTACCTTGACTGCATCAGGGACCAAACAAAAC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp CATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTATGAAACAGCAGAAGTTCACTATTaGAGTGGTAGATATCCTGTA +
Preference number: 4 (lower is better)
Translates to: HLAESQTQEGACAKRYETAEVHY*SGRYPV
Trigger: TACAGGATATCTACCACTTCAATAGTGAACTTCTGC...TGTTTCATAGCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATTGCCACACAGGATGTaGGCTTTGTATGTAAACGTG +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKLPHRM*ALYVNV
Trigger: CACGTTTACATACAAAGCTCACATCCTGTGTGGCAA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTCCATTACTATAGGTTaGATGCAGAAGCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLSITIG*MQKPVS
Trigger: GGAGACTGGCTTCTGCATTCAACCTATAGTAATGGA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATAGGGTAAATTTCTATTaGCCACCACAACTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHRVNFY*PPQLSV
Trigger: CACAGAAAGTTGTGGTGGTCAATAGAAATTTACCCT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTGGACAATATTTTGTTaGTTGGGAGATGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYWTIFC*LGDGPL
Trigger: GAGGGGGCCATCTCCCAATCAACAAAATATTGTCCA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACAAACTAAGGTCATTCTaGTGCCGAAGGAACCATGGC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYKLRSF*CRRNHG
Trigger: GCCATGGTTCCTTCGGCAGCAGAATGACCTTAGTTT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTTCATGTCATTGATATaGCAGGCGACTCGCTGCATT +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLFMSLI*QATRCI
Trigger: AATGCAGCGAGTCGCCTGGCATATCAATGACATGAA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTCAGAGGCGTTTGTCTTaGTGGGATTTGGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCQRRLS*WDLAWT
Trigger: AGTCCAGGCCAAATCCCAGCAAGACAAACGCCTCTG...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACTTTTGGATGTCTTGTaGTGTTTCACTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLLDVL*CFTGLQ
Trigger: TTGAAGACCAGTGAAACAGCACAAGACATCCAAAAG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAAGCTGCGGACAATTaGCTGGGAGTACTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQAADN*LGVLFV
Trigger: TACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATGTAAAGACAGCAGCTaGTGCTTTCCCACATCACTA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKCKDSS*CFPTSL
Trigger: TAGTGATGTGGGAAAGCAGCAGCTGCTGTCTTTACA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGGACTATTCAAAGAATaGAATGTGTTGCCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLGLFKE*NVLPLQ
Trigger: CTGCAGCGGCAACACATTGCATTCTTTGAATAGTCC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAATCAAAAAGCGAAAATaGGAAACAGCTTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSIKKRK*ETAFLG
Trigger: TCCCAGGAAAGCTGTTTCGCATTTTCGCTTTTTGAT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTTCATTCTTGGCTCGCTaGATGCGGAAGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCSFLAR*MRKVPS
Trigger: TGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGA...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTGCTTGGCCTTAGCTaGAATCTTGGCTGCATGGTT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLLGLS*NLGCMV
Trigger: AACCATGCAGCCAAGATTCCAGCTAAGGCCAAGCAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACTTGTGCTGTTTCACTaGTCTTCAAAACTTTATGTG +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSLVLFH*SSKLYV
Trigger: CACATAAAGTTTTGAAGACCAGTGAAACAGCACAAG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTGTTGATTGGGAGATaGCCCCCTCCAAAGATAGTC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLLIGR*PPPKIV
Trigger: GACTATCTTTGGAGGGGGCCATCTCCCAATCAACAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGCATTTCTTAAGGTGTaGGCACTATTGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHAFLKV*ALLSGY
Trigger: ATAACCTGACAATAGTGCCCACACCTTAAGAAATGC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGCATTTCTTAAGGTGTaGGCACTATTGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSAFLKV*ALLSGY
Trigger: ATAACCTGACAATAGTGCCCACACCTTAAGAAATGC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACAGGATAAAACTACCTaGGCCTTCTGGATAACAGGA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKQDKTT*AFWITG
Trigger: TCCTGTTATCCAGAAGGCCCAGGTAGTTTTATCCTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCACAAAAACCCTAAAATaGGCACCTCAGACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLTKTLK*APQTAV
Trigger: GACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCTGCGTACAGAAAATaGGTCCCGCTACATTTTAAT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSAYRK*VPLHFN
Trigger: ATTAAAATGTAGCGGGACCCATTTTCTGTACGCAGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTGCCACACAGGATGTaGGCTTTGTATGTAAACGTG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLPHRM*ALYVNV
Trigger: CACGTTTACATACAAAGCTCACATCCTGTGTGGCAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATCAGATACAGGCTTATaGGGCATAGACAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSDTGL*GIDKLP
Trigger: TGGTAACTTGTCTATGCCTCATAAGCCTGTATCTGA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGTGAGTCTTGGAGTGTaGGATCTGAGAGTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYVSLGV*DLRVFQ
Trigger: CTGAAAAACTCTCAGATCTCACACTCCAAGACTCAC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAGCATCCACAAACTTTaGGTCAGATTTCCTTCTACG +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLSIHKL*VRFPST
Trigger: CGTAGAAGGAAATCTGACTCAAAGTTTGTGGATGCT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACAAAGCTGCTTGAACTaGGACACTGAAATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKQSCLN*DTEIFP
Trigger: GGGAAAAATTTCAGTGTCTCAGTTCAAGCAGCTTTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTTAAGCAAAGCTGCTTaGACTGAGACACTGAAATTT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLSKAA*TETLKF
Trigger: AAATTTCAGTGTCTCAGTTCAAGCAGCTTTGCTTAA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTAAGCAAAGCTGCTTaGACTGAGACACTGAAATTT +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLSKAA*TETLKF
Trigger: AAATTTCAGTGTCTCAGTTCAAGCAGCTTTGCTTAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCAATCTGCATTTTATTaGCCTTGGTTTTCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHQSAFY*PWFSLS
Trigger: GCTTAGAGAAAACCAAGGTCAATAAAATGCAGATTG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTCATGTCATTGATATaGCAGGCGACTCGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYFMSLI*QATRCI
Trigger: AATGCAGCGAGTCGCCTGGCATATCAATGACATGAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGCAATGTGTTGCCGCTaGAGACATTATCAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKAMCCR*RHYQKS
Trigger: ACTTTTCTGATAATGTCTGCAGCGGCAACACATTGC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGAAAGCATTCTTGCTaGATTAATTGCAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRKHSC*INCSLQ
Trigger: TTGAAGACTGCAATTAATGCAGCAAGAATGCTTTCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCAAAACACTCTGCTATaGCCACAGGATCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLQNTLL*PQDHFH
Trigger: GTGAAAATGATCCTGTGGCCATAGCAGAGTGTTTTG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACTTGTGCTGTTTCACTaGTCTTCAAAACTTTATGTG +
Preference number: 4 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLVLFH*SSKLYV
Trigger: CACATAAAGTTTTGAAGACCAGTGAAACAGCACAAG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACAATATTTTGTTGATTaGGAGATGGCCCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKQYFVD*EMAPSK
Trigger: TTTGGAGGGGGCCATCTCCCAATCAACAAAATATTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCACAAAATGGTCTGGTaGGATTTCAGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHHKMVW*DFSFAF
Trigger: AAAAGCAAAACTGAAATCCCACCAGACCATTTTGTG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGCACACAAAATGGTCTaGTGGGATTTCAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKAHKMV*WDFSFA
Trigger: AGCAAAACTGAAATCCCACCAGACCATTTTGTGTGC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAACAGGCACACAAAATaGTCTGGTGGGATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKNRHTK*SGGISV
Trigger: AACTGAAATCCCACCAGACCATTTTGTGTGCCTGTT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGTTGATGGAATCCATTaGTTTGTTGATCAAGACGGA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLVDGIH*FVDQDG
Trigger: TCCGTCTTGATCAACAAATCAATGGATTCCATCAAC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCCTTGAACTGAGACACTaGAATTTTTCCCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLLELRH*NFSLRD
Trigger: GTCTCTAAGGGAAAAATTTCAGTGTCTCAGTTCAAG...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACTTTCAACAGTCATTTaGAGAGTTAAGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKLSTVI*RVKWFP
Trigger: TGGGAACCACTTAACTCTTCAAATGACTGTTGAAAG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGTGTATTCCTATAGGTaGCATCAAAGTCATGCAACA +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLVYSYR*HQSHAT
Trigger: TGTTGCATGACTTTGATGTCACCTATAGGAATACAC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAGTGTATTCCTATAGGTaGCATCAAAGTCATGCAACA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKVYSYR*HQSHAT
Trigger: TGTTGCATGACTTTGATGTCACCTATAGGAATACAC...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGGAACTCTTCACTCTTaGACACAAAACACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYGTLHS*TQNTLL
Trigger: TAGCAGAGTGTTTTGTGTCCAAGAGTGAAGAGTTCC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTCACAGCCACGGACCTTaGATAGTTAGTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCHSHGP*IVSAIL
Trigger: CAGTATTGCACTAACTATCCAAGGTCCGTGGCTGTG...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTGAGAATCCGCTGAACTaGTTTCAAGAGATAGGACCC +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCENPLN*FQEIGP
Trigger: GGGTCCTATCTCTTGAAACCAGTTCAGCGGATTCTC...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTGGAATCTTGGCTGCATaGTTCTCCAGAATCAGTCTC +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCGILAA*FSRISL
Trigger: GAGACTGATTCTGGAGAACCATGCAGCCAAGATTCC...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTCTTCTCAGCCGATATaGAGCAGAACCTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYSSQPI*SRTFFR
Trigger: TCTAAAGAAGGTTCTGCTCCATATCGGCTGAGAAGA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACACTTTCTGTGAGTCTTaGAGTGTGAGATCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYTFCES*SVRSES
Trigger: ACTCTCAGATCTCACACTCCAAGACTCACAGAAAGT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATCAAAATCTGTGTCCTaGCCAACAGAAATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSKSVS*PTEMVY
Trigger: ATAGACCATTTCTGTTGGCCAGGACACAGATTTTGA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGCAGAAGTTCACTATTaGAGTGGTAGATATCCTGTA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYAEVHY*SGRYPV
Trigger: TACAGGATATCTACCACTTCAATAGTGAACTTCTGC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGTTGATGGAATCCATTaGTTTGTTGATCAAGACGGA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYVDGIH*FVDQDG
Trigger: TCCGTCTTGATCAACAAATCAATGGATTCCATCAAC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCTTTCAACAGTCATTTaGAGAGTTAAGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLSTVI*RVKWFP
Trigger: TGGGAACCACTTAACTCTTCAAATGACTGTTGAAAG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATTAAACAAGCCCATGTaGCTATTTGAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKLNKPM*LFETKV
Trigger: GACCTTAGTTTCAAATAGCCACATGGGCTTGTTTAA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATCTCTAGAAACCTTTTaGATGTCTTGTGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSLETF*MSCAVS
Trigger: TGAAACAGCACAAGACATCCAAAAGGTTTCTAGAGA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTCTCTGAATACAATCTaGTCATACAACTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLSLNTI*SYNWEY
Trigger: GTATTCCCAGTTGTATGACCAGATTGTATTCAGAGA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATCTCTGAATACAATCTaGTCATACAACTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSLNTI*SYNWEY
Trigger: GTATTCCCAGTTGTATGACCAGATTGTATTCAGAGA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTCAAAATCTGTGTCCTaGCCAACAGAAATGGTCTAT +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYSKSVS*PTEMVY
Trigger: ATAGACCATTTCTGTTGGCCAGGACACAGATTTTGA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR TCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCAATCTGCATTTTATTaGCCTTGGTTTTCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYQSAFY*PWFSLS
Trigger: GCTTAGAGAAAACCAAGGTCAATAAAATGCAGATTG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAGAAAGCATTCTTGCTaGATTAATTGCAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YSTIRAASSAISKSCAVKRKHSC*INCSLQ
Trigger: TTGAAGACTGCAATTAATGCAGCAAGAATGCTTTCT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTAAACAAGCCCATGTaGCTATTTGAAACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLNKPM*LFETKV
Trigger: GACCTTAGTTTCAAATAGCCACATGGGCTTGTTTAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTAGCCTGGATGATGAATaGCATCCATTTCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCSLDDE*HPFQGL
Trigger: CAATCCTTGAAATGGATGCCATTCATCATCCAGGCT...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTACTGTAACAGAAGCCTaGATGATGAATGGCATCCAT +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCTVTEA*MMNGIH
Trigger: ATGGATGCCATTCATCATCCAGGCTTCTGTTACAGT...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CCA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACATGAGAAGAATACTTTaGAGAAGCAAGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYMRRIL*RSKKLG
Trigger: CCCAAGTTTCTTGCTTCTCCAAAGTATTCTTCTCAT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR GCA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTCTTTTGGATGTCTTGTaGTGTTTCACTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCLLDVL*CFTGLQ
Trigger: TTGAAGACCAGTGAAACAGCACAAGACATCCAAAAG...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS TCA 90 bp GGCAGTTGGCGCGGCTGGCTCTGCCAGCCCTGCTCTTCACGGGCGTaGGGAGAGCCTGGCTCTCAGGCAGGGACAGCGTGGACACAGAGC +
Preference number: 5 (lower is better)
Translates to: GSWRGWLCQPCSSRA*GEPGSQAGTAWTQS
Trigger: GCTCTGTGTCCACGCTGTCCCTGCCTGAGAGCCAGGCTCTCCTCACGCCCGTGAAGAGCAGGGCTGGCAGAGCCAGCCGCGCCAACTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp CTTGGGGCTCGTGGCCGAGTCTGCGATCGTCTTGGGTGCCCCGTTTaGGTCCACTCTCCACTGCGCTCTGGGTGGCCTTTCGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LGARGRVCDRLGCPV*VHSPLRSGWPFAAL
Trigger: GAGGGCAGCGAAAGGCCACCCAGAGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS GCA 90 bp ACAGAGCGCCCCACGTCCCGGCTCAGCTCAGGGGTGCTCTCTGCGTaGAGCCTGTCTGGCACATCATCCTTGCTCACAGGAAACGCTGCC +
Preference number: 5 (lower is better)
Translates to: TERPTSRLSSGVLSA*SLSGTSSLLTGNAA
Trigger: GGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAGCTGAGCCGGGACGTGGGGCGCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp CGATCGTCTTGGGTGCCCCGTTTGAGTCCACTCTCCACTGCGCTCTaGGTGGCCTTTCGCTGCCCTCATCCGCGTTCTGTTGCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: RSSWVPRLSPLSTAL*VAFRCPHPRSVAPW
Trigger: CCACGGGGCAACAGAACGCGGATGAGGGCAGCGAAAGGCCACCCAGAGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 90 bp CCACATAGAGGAGCTTGGGGCTCGTGGCCGAGTCTGCGATCGTCTTaGGTGCCCCGTTTGAGTCCACTCTCCACTGCGCTCTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PHRGAWGSWPSLRSS*VPRLSPLSTALWVA
Trigger: GGCCACCCAGAGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCCTCTATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 90 bp CACGTCCCGGCTCAGCTCAGGGGTGCTCTCTGCGTGCAGCCTGTCTaGCACATCATCCTTGCTCACAGGAAACGCTGCCAGGAGACGGTC +
Preference number: 5 (lower is better)
Translates to: HVPAQLRGALCVQPV*HIILAHRKRCQETV
Trigger: GACCGTCTCCTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAGCTGAGCCGGGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp GCTTCGATTCCTCCATCCTCTGACCAAAGCCCCCACCATAGCTGCTaGCAGCATGCTCCCCAGGTCGCCGTGGTCCTGCCTTGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: ASIPPSSDQSPHHSC*QHAPQVAVVLPWWV
Trigger: CACCCACCAAGGCAGGACCACGGCGACCTGGGGAGCATGCTGCCAGCAGCTATGGTGGGGGCTTTGGTCAGAGGATGGAGGAATCGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS GCA 90 bp AGAGCTTCGATTCCTCCATCCTCTGACCAAAGCCCCCACCATAGCTaGTGGCAGCATGCTCCCCAGGTCGCCGTGGTCCTGCCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: RASIPPSSDQSPHHS*WQHAPQVAVVLPWW
Trigger: CCACCAAGGCAGGACCACGGCGACCTGGGGAGCATGCTGCCAGCAGCTATGGTGGGGGCTTTGGTCAGAGGATGGAGGAATCGAAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS TCA 90 bp TCCTGCGGGGACCGTCGGCTGGGAAACAAGGCTTGCCTGATCTGGTaGTCGGTCCAGATGTTTCTGAGAGCTCCACCCGCTCGAAGCACG +
Preference number: 5 (lower is better)
Translates to: SCGDRRLGNKACLIW*SVQMFLRAPPARST
Trigger: CGTGCTTCGAGCGGGTGGAGCTCTCAGAAACATCTGGACCGATCACCAGATCAGGCAAGCCTTGTTTCCCAGCCGACGGTCCCCGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp TCTGCTGCCGAAGGAACCATGGCTGTCGCGGGAAGAGGCCGAGGATaGTGTGGAACCGAAGCTGACGGGTCGGTCACTATCAGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: SAAEGTMAVAGRGRG*CGTEADGSVTIREL
Trigger: GAGCTCTCTGATAGTGACCGACCCGTCAGCTTCGGTTCCACATCATCCTCGGCCTCTTCCCGCGACAGCCATGGTTCCTTCGGCAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS GCA 90 bp GCTCAGGGGTGCTCTCTGCGTGCAGCCTGTCTGGCACATCATCCTTaGTCACAGGAAACGCTGCCAGGAGACGGTCTCTGGCCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: AQGCSLRAACLAHHP*SQETLPGDGLWPCL
Trigger: AAGACAAGGCCAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTGCCCCGTGGCGGGGTaGTCCCTCTGCAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRCPVAG*SLCSSL
Trigger: CAGCGAGCTGCAGAGGGACAACCCCGCCACGGGGCA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp CATGTGTTGCTCTCCCCAGCACTGCTGGCCCGCCTGACAATCCTGTaGCCAGAGCTGGAGGTCTCTGTGGACTCCATCTGTCCCATATGC +
Preference number: 5 (lower is better)
Translates to: HVLLSPALLARLTIL*PELEVSVDSICPIC
Trigger: GCATATGGGACAGATGGAGTCCACAGAGACCTCCAGCTCTGGTCACAGGATTGTCAGGCGGGCCAGCAGTGCTGGGGAGAGCAACACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 90 bp GCTTGTCGAAGAGGAAGAGCGTCCGCTCATTCTTGGCTCGCTGGATaGGGAAGGTTCCCTCAAGCACCAGTTCCCCGTAGCTGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: ACRRGRASAHSWLAG*GRFPQAPVPRSWSG
Trigger: ACCTGACCAGCTACGGGGAACTGGTGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCTCTTCCTCTTCGACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CCA 90 bp AGGGGCTTCGTCCTCACTGAGCTGGAGGCTGTCTTGGGAAACAAATaGCCTCAGGCTGTCACAGCACACGAAGTCGGCCTCCAGACCCAA +
Preference number: 5 (lower is better)
Translates to: RGFVLTELEAVLGNK*PQAVTAHEVGLQTQ
Trigger: TTGGGTCTGGAGGCCGACTTCGTGTGCTGTGACAGCCTGAGGCCATTTGTTTCCCAAGACAGCCTCCAGCTCAGTGAGGACGAAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp GCTCCACCCGCTCGAAGCACGCTGATCATGGTAGAACTGCTAGGCTaGCTATTTCTCTGGGCAGGAGACGGCCTTGCTGAAGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: APPARSTLIMVELLG*LFLWAGDGLAEDSW
Trigger: CCAGCTGTCTTCAGCAAGGCCGTCTCCTGCCCAGAGAAATAGTCAGCCTAGCAGTTCTACCATGATCAGCGTGCTTCGAGCGGGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS TCA 90 bp TTTGTGCGTAAAGAGAGCCCTTACTGTGGCCAGCTTGCCTCTTTGTaGAGGCTAACTCTGGGGTGCTCTTGGGGCGAACGGAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: FVRKESPYCGQLASL*RLTLGCSWGERSPW
Trigger: CCAGGGACTCCGTTCGCCCCAAGAGCACCCCAGAGTTAGCCTTCACAAAGAGGCAAGCTGGCCACAGTAAGGGCTCTCTTTACGCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp AACCATGATCGGGAGTGGCCTGATGGTAAGGGGCTTCGTCCTCACTaGGCTGGAGGCTGTCTTGGGAAACAAATGGCCTCAGGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: NHDREWPDGKGLRPH*AGGCLGKQMASGCH
Trigger: GTGACAGCCTGAGGCCATTTGTTTCCCAAGACAGCCTCCAGCTCAGTGAGGACGAAGCCCCTTACCATCAGGCCACTCCCGATCATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp ACCACGCTGCATCTCTGCACAGAGCCTGGCAGAGGGTCAGAGGTTTaGAGAGAAGGCACAGAGCAAGCTGCGGACAATTGCCTGGGAGTA +
Preference number: 5 (lower is better)
Translates to: TTLHLCTEPGRGSEV*REGTEQAADNCLGV
Trigger: TACTCCCAGGCAATTGTCCGCAGCTTGCTCTGTGCCTTCTCTTCAAACCTCTGACCCTCTGCCAGGCTCTGTGCAGAGATGCAGCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp GGAACGCCTGGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATCTCCATCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GTPGCRLGMWNFGYS*WHFKTQLVPISIPG
Trigger: GCCTGGGATGGAGATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAACTCTGGGGTGCTCTaGGGGCGAACGGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNNSGVL*GRTESL
Trigger: CAGGGACTCCGTTCGCCCCAAGAGCACCCCAGAGTT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCAGGAGGGAGGATTCTaGAGGGCTGGCCCAGCCATC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNQEGGF*RAGPAI
Trigger: GATGGCTGGGCCAGCCCTCAAGAATCCTCCCTCCTG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp GGAACGCCTGGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATCTCTGCTCCACTC +
Preference number: 5 (lower is better)
Translates to: GTPGCRLGMWNFGYS*WHFKTQLVPISAPL
Trigger: GAGTGGAGCAGAGATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS TCA 90 bp CATGGCTGTCGCGGGAAGAGGCCGAGGATGATGTGGAACCGAAGCTaGCGGGTCGGTCACTATCAGAGAGCTCCATTGTCTTCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: HGCRGKRPRMMWNRS*RVGHYQRAPLSSVL
Trigger: AAGAACTGAAGACAATGGAGCTCTCTGATAGTGACCGACCCGTCAGCTTCGGTTCCACATCATCCTCGGCCTCTTCCCGCGACAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS GCA 90 bp GGAGTTCATGCGTGCTTTGGCTGGATGCCTCTCCACCTGAGAGGGTaGCATCTGTTTGTGCGTAAAGAGAGCCCTTACTGTGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: GVHACFGWMPLHLRG*HLFVRKESPYCGQL
Trigger: AAGCTGGCCACAGTAAGGGCTCTCTTTACGCACAAACAGATGGCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp GAATTTCCTGAACAACTCTATCCACATAGAGGAGCTTGGGGCTCGTaGCCGAGTCTGCGATCGTCTTGGGTGCCCCGTTTGAGTCCACTC +
Preference number: 5 (lower is better)
Translates to: EFPEQLYPHRGAWGS*PSLRSSWVPRLSPL
Trigger: GAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCCTCTATGTGGATAGAGTTGTTCAGGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 90 bp CGGTTTCCAGAATTTCCTGAACAACTCTATCCACATAGAGGAGCTTaGGGCTCGTGGCCGAGTCTGCGATCGTCTTGGGTGCCCCGTTTG +
Preference number: 5 (lower is better)
Translates to: RFPEFPEQLYPHRGA*GSWPSLRSSWVPRL
Trigger: CAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCCTCTATGTGGATAGAGTTGTTCAGGAAATTCTGGAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 90 bp CCCCACCAAGAATGGCTCCATCTTTCCTTCAGACGTCCTATGCCCTaGATACTAGCGCAGAGGGGTCCGTGTGTCAACTCAGGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: PHQEWLHLSFRRPMP*ILAQRGPCVNSGFK
Trigger: CTTGAACCCTGAGTTGACACACGGACCCCTCTGCGCTAGTATCCAGGGCATAGGACGTCTGAAGGAAAGATGGAGCCATTCTTGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATGCCCCGTGGCGGGGTaGTCCCTCTGCAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKCPVAG*SLCSSL
Trigger: CAGCGAGCTGCAGAGGGACAACCCCGCCACGGGGCA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCTCATCCGCGTTCTGTaGCCCCGTGGCGGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLIRVL*PRGGVV
Trigger: GACAACCCCGCCACGGGGCAACAGAACGCGGATGAG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACTCATCCGCGTTCTGTaGCCCCGTGGCGGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLIRVL*PRGGVV
Trigger: GACAACCCCGCCACGGGGCAACAGAACGCGGATGAG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGAGTCTGCGATCGTCTaGGGTGCCCCGTTTGAGTCC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNESAIV*GAPFES
Trigger: GGACTCAAACGGGGCACCCAAGACGATCGCAGACTC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGAGTCTGCGATCGTCTaGGGTGCCCCGTTTGAGTCC +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRESAIV*GAPFES
Trigger: GGACTCAAACGGGGCACCCAAGACGATCGCAGACTC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAGCGTCCGCTCATTCTaGGCTCGCTGGATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSVRSF*ARWMRK
Trigger: CTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS TCA 90 bp CTGACGGGTCGGTCACTATCAGAGAGCTCCATTGTCTTCAGTTCTTaGGGGCAGGAACGCCTGGCTGTCGTCTTGGGATGTGGAACTTTG +
Preference number: 5 (lower is better)
Translates to: LTGRSLSESSIVFSS*GQERLAVVLGCGTL
Trigger: CAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAATGGAGCTCTCTGATAGTGACCGACCCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS TCA 90 bp AACCGCTTGGAGTTCATGCGTGCTTTGGCTGGATGCCTCTCCACCTaGGAGGGTGCCATCTGTTTGTGCGTAAAGAGAGCCCTTACTGTG +
Preference number: 5 (lower is better)
Translates to: NRLEFMRALAGCLST*EGAICLCVKRALTV
Trigger: CACAGTAAGGGCTCTCTTTACGCACAAACAGATGGCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 90 bp GTGATGCTTTGGCCCAGAACACGATTTGTCCAGGCAGCAGTTTCCTaGCTCTTCCGCCCCACCAAGAATGGCTCCATCTTTCCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: VMLWPRTRFVQAAVS*LFRPTKNGSIFPSD
Trigger: GTCTGAAGGAAAGATGGAGCCATTCTTGGTGGGGCGGAAGAGGCAGGAAACTGCTGCCTGGACAAATCGTGTTCTGGGCCAAAGCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCCAGAGGCGTTTGTCTaGCTGGGATTTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNPEAFV*LGFGLD
Trigger: GTCCAGGCCAAATCCCAGCAAGACAAACGCCTCTGG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGAGTTCATGCGTGCTTaGGCTGGATGCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKREFMRA*AGCLST
Trigger: GGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp ATGTGGCTATTTGAAACTAAGGTCATTCTGCTGCCGAAGGAACCATaGCTGTCGCGGGAAGAGGCCGAGGATGATGTGGAACCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: MWLFETKVILLPKEP*LSREEAEDDVEPKL
Trigger: CAGCTTCGGTTCCACATCATCCTCGGCCTCTTCCCGCGACAGCCATGGTTCCTTCGGCAGCAGAATGACCTTAGTTTCAAATAGCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATAGCGTCCGCTCATTCTaGGCTCGCTGGATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSVRSF*ARWMRK
Trigger: CTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACCAGAGGCGTTTGTCTaGCTGGGATTTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSPEAFV*LGFGLD
Trigger: GTCCAGGCCAAATCCCAGCAAGACAAACGCCTCTGG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAGAACCCAGAGGCGTTaGTCTTGCTGGGATTTGGCC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNRTQRR*SCWDLA
Trigger: GGCCAAATCCCAGCAAGACAAACGCCTCTGGGTTCT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGCTGGGAAACAAGGCTaGCCTGATCTGGTGATCGGT +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRAGKQG*PDLVIG
Trigger: ACCGATCACCAGATCAGGCAAGCCTTGTTTCCCAGC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCAGGAGGGCATGTGTaGCTCTCCCCAGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSGGHV*LSPALL
Trigger: CAGCAGTGCTGGGGAGAGCAACACATGCCCTCCTGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCAGGAGGGCATGTGTaGCTCTCCCCAGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSGGHV*LSPALL
Trigger: CAGCAGTGCTGGGGAGAGCAACACATGCCCTCCTGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTCCTGCCCTTCTGTTTaGGGGCTGTTCTGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRSCPSV*GLFCSS
Trigger: GGAACTGCAGAACAGCCCCAAAACAGAAGGGCAGGA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp GGAACGCCTGGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATCCTGAATTGCAAT +
Preference number: 5 (lower is better)
Translates to: GTPGCRLGMWNFGYS*WHFKTQLVPILNCN
Trigger: ATTGCAATTCAGGATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS GCA 90 bp CTATGGTGTCATAGATGTTCTCCTCAACCGCTTGGAGTTCATGCGTaGTTTGGCTGGATGCCTCTCCACCTGAGAGGGTGCCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: LWCHRCSPQPLGVHA*FGWMPLHLRGCHLF
Trigger: AAACAGATGGCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAACATCTATGACACCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 90 bp TGCGTGCAGCCTGTCTGGCACATCATCCTTGCTCACAGGAAACGCTaGCAGGAGACGGTCTCTGGCCTTGTCTTCATTTTTCTTGATGTA +
Preference number: 5 (lower is better)
Translates to: CVQPVWHIILAHRKR*QETVSGLVFIFLDV
Trigger: TACATCAAGAAAAATGAAGACAAGGCCAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp CCATTGTCTTCAGTTCTTGAGGGCAGGAACGCCTGGCTGTCGTCTTaGGATGTGGAACTTTGGTTACAGCTGATGGCACTTCAAGACGCA +
Preference number: 5 (lower is better)
Translates to: PLSSVLEGRNAWLSS*DVELWLQLMALQDA
Trigger: TGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS CCA 90 bp CTTGGGATTCTTGTAGTGGAAGACGCTGAAGCTGAGCGGCTCTTTTaGAATCACCTCCACAAGCATGAGGTTGCCACACAGGATGTGAGC +
Preference number: 5 (lower is better)
Translates to: LGILVVEDAEAERLF*NHLHKHEVATQDVS
Trigger: GCTCACATCCTGTGTGGCAACCTCATGCTTGTGGAGGTGATTCCAAAAGAGCCGCTCAGCTTCAGCGTCTTCCACTACAAGAATCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CCA 90 bp CATAGATGTTCTCCTCAACCGCTTGGAGTTCATGCGTGCTTTGGCTaGATGCCTCTCCACCTGAGAGGGTGCCATCTGTTTGTGCGTAAA +
Preference number: 5 (lower is better)
Translates to: HRCSPQPLGVHACFG*MPLHLRGCHLFVRK
Trigger: TTTACGCACAAACAGATGGCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAACATCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp GACCCAAGGAGTTGTAAAGATGGTCCTGACACCAGTTCTCTTTGTTaGGCTGACTTACTACCACGCTGCATCTCTGCACAGAGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: DPRSCKDGPDTSSLC*ADLLPRCISAQSLA
Trigger: TGCCAGGCTCTGTGCAGAGATGCAGCGTGGTAGTAAGTCAGCCCAACAAAGAGAACTGGTGTCAGGACCATCTTTACAACTCCTTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp CCAGGCCCCTTCAATATTCCCATATTTCACTCGCCTGTGATGCTTTaGCCCAGAACACGATTTGTCCAGGCAGCAGTTTCCTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PGPFNIPIFHSPVML*PRTRFVQAAVSCLF
Trigger: GAAGAGGCAGGAAACTGCTGCCTGGACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGAGTGAAATATGGGAATATTGAAGGGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCACATTGTCTTCAGTTCTaGAGGGCAGGAACGCCTGGC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSHCLQF*RAGTPG
Trigger: GCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAATG...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGTGATGAGCAGCAGCTaGTCGAAGAGGAAGAGCGTC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSVMSSS*SKRKSV
Trigger: GACGCTCTTCCTCTTCGACAAGCTGCTGCTCATCAC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGCCTTAGCTGGAATCTaGGCTGCATGGTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRALAGI*AAWFSR
Trigger: TCTGGAGAACCATGCAGCCAAGATTCCAGCTAAGGC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATCCTGCCCTTCTGTTTaGGGGCTGTTCTGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSSCPSV*GLFCSS
Trigger: GGAACTGCAGAACAGCCCCAAAACAGAAGGGCAGGA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAACTCTGGGGTGCTCTaGGGGCGAACGGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKNSGVL*GRTESL
Trigger: CAGGGACTCCGTTCGCCCCAAGAGCACCCCAGAGTT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGTTCTCCTCAACCGCTaGGAGTTCATGCGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRVLLNR*EFMRAL
Trigger: CAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAAC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAAAAGGTGCTCCGCTTaGCACGCTTTAGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSKRCSA*HALGCC
Trigger: GCAGCAGCCTAAAGCGTGCAAAGCGGAGCACCTTTT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAGGGCCAGGATCAAGTaGGTCATTTGGCAGAATCCC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNRARIK*VIWQNP
Trigger: GGGATTCTGCCAAATGACCAACTTGATCCTGGCCCT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTGCAGTGAGCCAAGATaGCACTCCAACTTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNCSEPR*HSNLGN
Trigger: GTTGCCCAAGTTGGAGTGCAATCTTGGCTCACTGCA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp AGAACTGCTAGGCTGACTATTTCTCTGGGCAGGAGACGGCCTTGCTaGAGACAGCTGGGGAGATCCTTCCTCTCTAGAAACCTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: RTARLTISLGRRRPC*RQLGRSFLSRNLLD
Trigger: ATCCAAAAGGTTTCTAGAGAGGAAGGATCTCCCCAGCTGTCTTCAGCAAGGCCGTCTCCTGCCCAGAGAAATAGTCAGCCTAGCAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS TCA 90 bp TCTCCATCCCAGGCCCCTTCAATATTCCCATATTTCACTCGCCTGTaGTGCTTTGGCCCAGAACACGATTTGTCCAGGCAGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SPSQAPSIFPYFTRL*CFGPEHDLSRQQFP
Trigger: AGGAAACTGCTGCCTGGACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGAGTGAAATATGGGAATATTGAAGGGGCCTGGGATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS GCA 90 bp CCAAAGGGAGTCATCTCCTCCTGCCCTTCTGTTTTGGGGCTGTTCTaGAGTTCCCTAGTTCTGTCACTAGTTCCTATTTCAGGAGGGCAT +
Preference number: 5 (lower is better)
Translates to: PKGVISSCPSVLGLF*SSLVLSLVPISGGH
Trigger: ATGCCCTCCTGAAATAGGAACTAGTGACAGAACTAGGGAACTGCAGAACAGCCCCAAAACAGAAGGGCAGGAGGAGATGACTCCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp TATCAGAGAGCTCCATTGTCTTCAGTTCTTGAGGGCAGGAACGCCTaGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTGATGGCA +
Preference number: 5 (lower is better)
Translates to: YQRAPLSSVLEGRNA*LSSWDVELWLQLMA
Trigger: TGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAATGGAGCTCTCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACGCCTGGCTGTCGTCTaGGGATGTGGAACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRLAVV*GCGTLV
Trigger: AACCAAAGTTCCACATCCCAAGACGACAGCCAGGCG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATCTTGGGTGCCCCGTTaGAGTCCACTCTCCACTGCG +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKSWVPR*SPLSTA
Trigger: CGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACCAGGGGAAGTTTTGTTaGGTCCCTGATGCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNQGKFC*VPDAVK
Trigger: CTTGACTGCATCAGGGACCAAACAAAACTTCCCCTG...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATTCCGCTTCATGTCATaGATATGCCAGGCGACTCGC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSFRFMS*ICQATR
Trigger: GCGAGTCGCCTGGCATATCAATGACATGAAGCGGAA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAGCGTCCGCTCATTCTaGGCTCGCTGGATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLSVRSF*ARWMRK
Trigger: CTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGAACCCAGAGGCGTTaGTCTTGCTGGGATTTGGCC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRTQRR*SCWDLA
Trigger: GGCCAAATCCCAGCAAGACAAACGCCTCTGGGTTCT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGCCTTAGCTGGAATCTaGGCTGCATGGTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSALAGI*AAWFSR
Trigger: TCTGGAGAACCATGCAGCCAAGATTCCAGCTAAGGC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAAAAGGTGCTCCGCTTaGCACGCTTTAGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSKRCSA*HALGCC
Trigger: GCAGCAGCCTAAAGCGTGCAAAGCGGAGCACCTTTT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCTGGCACATCATCCTaGCTCACAGGAAACGCTGCC +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSGTSS*LTGNAA
Trigger: GGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATCTGGCACATCATCCTaGCTCACAGGAAACGCTGCC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSSGTSS*LTGNAA
Trigger: GGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCAGGAGGGAGGATTCTaGAGGGCTGGCCCAGCCATC +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYQEGGF*RAGPAI
Trigger: GATGGCTGGGCCAGCCCTCAAGAATCCTCCCTCCTG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAGGGCCAGGATCAAGTaGGTCATTTGGCAGAATCCC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSRARIK*VIWQNP
Trigger: GGGATTCTGCCAAATGACCAACTTGATCCTGGCCCT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTACAAAGGCCACCGCTaGAGAAAGCATTCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNYKGHR*RKHSCC
Trigger: GCAGCAAGAATGCTTTCTCAAGCGGTGGCCTTTGTA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATGCAGTGAGCCAAGATaGCACTCCAACTTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSCSEPR*HSNLGN
Trigger: GTTGCCCAAGTTGGAGTGCAATCTTGGCTCACTGCA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGCCCAGAACACGATTaGTCCAGGCAGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSGPEHD*SRQQFP
Trigger: AGGAAACTGCTGCCTGGACAAATCGTGTTCTGGGCC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS TCA 90 bp CCATCTCTGCTCCACTCAGGCTTAAGCACATCGTCTGCCTTCAGCTaGTGCAGTGACCTCAGTCAGGTAAAAGAAACAGCCTTTGCTAGT +
Preference number: 5 (lower is better)
Translates to: PSLLHSGLSTSSAFS*CSDLSQVKETAFAS
Trigger: ACTAGCAAAGGCTGTTTCTTTTACCTGACTGAGGTCACTGCATCAGCTGAAGGCAGACGATGTGCTTAAGCCTGAGTGGAGCAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS TCA 90 bp GGACAAGGGAACCTCTTATTCCATTTGTGGCTAGTAGACATCTTGTaGCCACTTAGGGGAAACTGCCTGAGAAAGAAGCCAACCCCACGG +
Preference number: 5 (lower is better)
Translates to: GQGNLLFHLWLVDIL*PLRGNCLRKKPTPR
Trigger: CCGTGGGGTTGGCTTCTTTCTCAGGCAGTTTCCCCTAAGTGGTCACAAGATGTCTACTAGCCACAAATGGAATAAGAGGTTCCCTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTATCAGAGAGCTCCATaGTCTTCAGTTCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRYQRAP*SSVLEG
Trigger: GCCCTCAAGAACTGAAGACAATGGAGCTCTCTGATA...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTCTTGGGTGCCCCGTTaGAGTCCACTCTCCACTGCG +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYSWVPR*SPLSTA
Trigger: CGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTATGAAACATTCCGCTTCATGTCATaGATATGCCAGGCGACTCGC +
Preference number: 5 (lower is better)
Translates to: HLAESQTQEGACAKRYETFRFMS*ICQATR
Trigger: GCGAGTCGCCTGGCATATCAATGACATGAAGCGGAA...TGTTTCATAGCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGCCTTAGCTGGAATCTaGGCTGCATGGTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSALAGI*AAWFSR
Trigger: TCTGGAGAACCATGCAGCCAAGATTCCAGCTAAGGC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGGATTGCTTGCTaGGCCTTAGCTGGAATCTTG +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNSRIAC*ALAGIL
Trigger: CAAGATTCCAGCTAAGGCCAAGCAAGCAATCCTTGA...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGTTCTCCTCAACCGCTaGGAGTTCATGCGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSVLLNR*EFMRAL
Trigger: CAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAAC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGGGCCAGGATCAAGTaGGTCATTTGGCAGAATCCC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRARIK*VIWQNP
Trigger: GGGATTCTGCCAAATGACCAACTTGATCCTGGCCCT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATACAAAGGCCACCGCTaGAGAAAGCATTCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSYKGHR*RKHSCC
Trigger: GCAGCAAGAATGCTTTCTCAAGCGGTGGCCTTTGTA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCTCGCCTGTGATGCTTaGGCCCAGAACACGATTTGT +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHLACDA*AQNTIC
Trigger: ACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGAG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS TCA 90 bp GAGGGCTGGCCCAGCCATCCTTCTGAATTTTCAAGGGAGACTCTCTaGATACAATCTGGTCATACAACTGGGAATACTCAGCAATCCTGG +
Preference number: 5 (lower is better)
Translates to: EGWPSHPSEFSRETL*IQSGHTTGNTQQSW
Trigger: CCAGGATTGCTGAGTATTCCCAGTTGTATGACCAGATTGTATTCAGAGAGTCTCCCTTGAAAATTCAGAAGGATGGCTGGGCCAGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp GGAACGCCTGGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATTTTTATAGTTGAA +
Preference number: 5 (lower is better)
Translates to: GTPGCRLGMWNFGYS*WHFKTQLVPIFIVE
Trigger: TTCAACTATAAAAATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367326.1
ENST00000644996.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATTGGGATGTGGAACTTaGGTTACAGCTGATGGCACT +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSLGCGT*VTADGT
Trigger: AGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATCGCTCCCTGAAGAATTaGGCCAGTATCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHRSLKN*ASILFL
Trigger: GAGGAACAAGATACTGGCCAAATTCTTCAGGGAGCG...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCACGCTCCCTGAAGAATTaGGCCAGTATCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRSLKN*ASILFL
Trigger: GAGGAACAAGATACTGGCCAAATTCTTCAGGGAGCG...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGTGATGAGCAGCAGCTaGTCGAAGAGGAAGAGCGTC +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLVMSSS*SKRKSV
Trigger: GACGCTCTTCCTCTTCGACAAGCTGCTGCTCATCAC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTTGTCTTGCTGGGATTaGGCCTGGACTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLLSCWD*AWTVCC
Trigger: GCAGCACACAGTCCAGGCCAAATCCCAGCAAGACAA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATTGTCTTGCTGGGATTaGGCCTGGACTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKLSCWD*AWTVCC
Trigger: GCAGCACACAGTCCAGGCCAAATCCCAGCAAGACAA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGAGTTCATGCGTGCTTaGGCTGGATGCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYEFMRA*AGCLST
Trigger: GGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGCAAGCTGCGGACAATaGCCTGGGAGTACTTTTTGT +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSASCGQ*PGSTFC
Trigger: ACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTTGC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCGGTGACTCTCACACCTaGAACTTCTGTGTAAAGACA +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRGDSHT*NFCVKT
Trigger: TGTCTTTACACAGAAGTTCAAGGTGTGAGAGTCACC...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAAGGTGTGGGCACTATaGTCAGGTTATGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSKVWAL*SGYGHR
Trigger: ACGATGGCCATAACCTGACAATAGTGCCCACACCTT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCATGTGAAAAAGTCTCCTaGCTGCCTTTGAGTCACAGG +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSCEKVS*LPLSHR
Trigger: CCTGTGACTCAAAGGCAGCAAGGAGACTTTTTCACA...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACGATCAAGTTGGTCATTaGGCAGAATCCCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNDQVGH*AESQTQ
Trigger: CTGAGTTTGGGATTCTGCCAAATGACCAACTTGATC...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS TCA 90 bp GCACAGAGCAAGCTGCGGACAATTGCCTGGGAGTACTTTTTGTATTaGTCTCAAACGTGGGATATCTTGACCTCAAGTCTTGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: AQSKLRTIAWEYFLY*SQTWDILTSSLALV
Trigger: CACCAGAGCAAGACTTGAGGTCAAGATATCCCACGTTTGAGATCAATACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTTGCTCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp ATCCTGAATTGCAATTCCATCTTGGCTCGGTCGGATAAGAAGTTTTaGCTCAGCCCTTTGAGGAGAGCTTCGATTCCTCCATCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: ILNCNSILARSDKKF*LSPLRRASIPPSSD
Trigger: GTCAGAGGATGGAGGAATCGAAGCTCTCCTCAAAGGGCTGAGTCAAAACTTCTTATCCGACCGAGCCAAGATGGAATTGCAATTCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTGGGATGTGGAACTTaGGTTACAGCTGATGGCACT +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLGCGT*VTADGT
Trigger: AGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACCGCCTGGCTGTCGTCTaGGGATGTGGAACTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYRLAVV*GCGTLV
Trigger: AACCAAAGTTCCACATCCCAAGACGACAGCCAGGCG...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATTCCGCTTCATGTCATaGATATGCCAGGCGACTCGC +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKFRFMS*ICQATR
Trigger: GCGAGTCGCCTGGCATATCAATGACATGAAGCGGAA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGTGATGAGCAGCAGCTaGTCGAAGAGGAAGAGCGTC +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYVMSSS*SKRKSV
Trigger: GACGCTCTTCCTCTTCGACAAGCTGCTGCTCATCAC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCAAGGATTGCTTGCTaGGCCTTAGCTGGAATCTTG +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSRIAC*ALAGIL
Trigger: CAAGATTCCAGCTAAGGCCAAGCAAGCAATCCTTGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAACCTTTTGGATGTCTaGTGCTGTTTCACTGGTCTT +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNNLLDV*CCFTGL
Trigger: AAGACCAGTGAAACAGCACAAGACATCCAAAAGGTT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGCTGGGAAACAAGGCTaGCCTGATCTGGTGATCGGT +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYAGKQG*PDLVIG
Trigger: ACCGATCACCAGATCAGGCAAGCCTTGTTTCCCAGC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAGATCAAGTTGGTCATTaGGCAGAATCCCAAACTCAG +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSDQVGH*AESQTQ
Trigger: CTGAGTTTGGGATTCTGCCAAATGACCAACTTGATC...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CCA 90 bp AGTTTTATGGCCCCTACCTCCTTATCCTGGTTAAACAAGCCCATGTaGCTATTTGAAACTAAGGTCATTCTGCTGCCGAAGGAACCATGG +
Preference number: 5 (lower is better)
Translates to: SFMAPTSLSWLNKPM*LFETKVILLPKEPW
Trigger: CCATGGTTCCTTCGGCAGCAGAATGACCTTAGTTTCAAATAGCCACATGGGCTTGTTTAACCAGGATAAGGAGGTAGGGGCCATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 90 bp CTGGCAGGAATCAGCTCCAGTTTTATGGCCCCTACCTCCTTATCCTaGTTAAACAAGCCCATGTGGCTATTTGAAACTAAGGTCATTCTG +
Preference number: 5 (lower is better)
Translates to: LAGISSSFMAPTSLS*LNKPMWLFETKVIL
Trigger: CAGAATGACCTTAGTTTCAAATAGCCACATGGGCTTGTTTAACCAGGATAAGGAGGTAGGGGCCATAAAACTGGAGCTGATTCCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACAGGGGAAGTTTTGTTaGGTCCCTGATGCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKQGKFC*VPDAVK
Trigger: CTTGACTGCATCAGGGACCAAACAAAACTTCCCCTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAACCTTTTGGATGTCTaGTGCTGTTTCACTGGTCTT +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSNLLDV*CCFTGL
Trigger: AAGACCAGTGAAACAGCACAAGACATCCAAAAGGTT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACAATGGCGGGCCCTCCTaGCTTCTTCTCTTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYNGGPS*LLLFQD
Trigger: ATCTTGGAAGAGAAGAAGCAAGGAGGGCCCGCCATT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCGCAAGCTGCGGACAATaGCCTGGGAGTACTTTTTGT +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLASCGQ*PGSTFC
Trigger: ACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTTGC...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACATGGAATCCATTGATTaGTTGATCAAGACGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNMESID*LIKTEE
Trigger: TTCCTCCGTCTTGATCAACAAATCAATGGATTCCAT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGTGACTCTCACACCTaGAACTTCTGTGTAAAGACA +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSGDSHT*NFCVKT
Trigger: TGTCTTTACACAGAAGTTCAAGGTGTGAGAGTCACC...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTTTTCAGTGCCCTGTaGATGCGAGTCAGCAATATC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSFFSAL*MRVSNI
Trigger: GATATTGCTGACTCGCATCAACAGGGCACTGAAAAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAAAAGAATGCAATGTGTaGCCGCTGCAGACATTATCA +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSKECNV*PLQTLS
Trigger: TGATAATGTCTGCAGCGGCAACACATTGCATTCTTT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCAAGACTGGACAATATTTaGTTGATTGGGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSRLDNI*LIGRWP
Trigger: GGGCCATCTCCCAATCAACAAAATATTGTCCAGTCT...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAAAAGGTGTGGGCACTATaGTCAGGTTATGGCCATCGT +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKKVWAL*SGYGHR
Trigger: ACGATGGCCATAACCTGACAATAGTGCCCACACCTT...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GCCAATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACAGCTCATGCTTAACTTaGTATCGATTAGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: ANDSSGPGSSWSFGRIPNSSCLT*YRLETG
Trigger: GCCTGTTTCTAATCGATACAAAGTTAAGCATGAGCT...GTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATTCTGTCATCCTTAGTTaGCCAGTTATAGCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHSVILS*PVIAGG
Trigger: TCCACCTGCTATAACTGGCAAACTAAGGATGACAGA...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAATATCAGAGAGCTCCATaGTCTTCAGTTCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKYQRAP*SSVLEG
Trigger: GCCCTCAAGAACTGAAGACAATGGAGCTCTCTGATA...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CATGTGCAAAGCGCTATGAAACATGAAGACACTCAGCATGAGAAAATATACTGTTTGTCTTGCTGGGATTaGGCCTGGACTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: HVQSAMKHEDTQHEKIYCLSCWD*AWTVCC
Trigger: GCAGCACACAGTCCAGGCCAAATCCCAGCAAGACAA...ACAGTATATTTTCTCATGCTGAGTGTCTTCATGTTTCATAGCGCTTTGCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CAA 90 bp TACAGTACAATCCGGGCTGCATCGTCAGCCATTTCCAAAAGTTGTGCTGTAAAACAAACGTGGGATATCTaGACCTCAAGTCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: YSTIRAASSAISKSCAVKQTWDI*TSSLAL
Trigger: CAGAGCAAGACTTGAGGTCAAGATATCCCACGTTTG...TTTTACAGCACAACTTTTGGAAATGGCTGACGATGCAGCCCGGATTGTACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp GAAATAGATTCTTGCCCTATTCCTGCAGCCAATGACTCCTCAGGGCCAGGATCAATGGAATCCATTGATTaGTTGATCAAGACGGAGGAA +
Preference number: 5 (lower is better)
Translates to: EIDSCPIPAANDSSGPGSMESID*LIKTEE
Trigger: TTCCTCCGTCTTGATCAACAAATCAATGGATTCCAT...TGATCCTGGCCCTGAGGAGTCATTGGCTGCAGGAATAGGGCAAGAATCTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CAAGTTGGTCATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCAAGGGTAAATTTCTATaGACCACCACAACTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QVGHLAESQTQEGACAKRKGKFL*TTTTFC
Trigger: ACAGAAAGTTGTGGTGGTCAATAGAAATTTACCCTT...GCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATGACCAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATAAAGAATGCAATGTGTaGCCGCTGCAGACATTATCA +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHKECNV*PLQTLS
Trigger: TGATAATGTCTGCAGCGGCAACACATTGCATTCTTT...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCTGTGAAAAAGTCTCCTaGCTGCCTTTGAGTCACAGG +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLCEKVS*LPLSHR
Trigger: CCTGTGACTCAAAGGCAGCAAGGAGACTTTTTCACA...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp CATTTGGCAGAATCCCAAACTCAGGAGGGTGCATGTGCAAAGCGCTATGAAACATTAGGAAATAGATTCTaGCCCTATTCCTGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: HLAESQTQEGACAKRYETLGNRF*PYSCSQ
Trigger: TTGGCTGCAGGAATAGGGCAAGAATCTATTTCCTAA...TGTTTCATAGCGCTTTGCACATGCACCCTCCTGAGTTTGGGATTCTGCCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475490.1
CDS-3UTR CAA 90 bp AATGACTCCTCAGGGCCAGGATCAAGTTGGTCATTTGGCAGAATCCCAAACTCATTAGGAAATAGATTCTaGCCCTATTCCTGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: NDSSGPGSSWSFGRIPNSLGNRF*PYSCSQ
Trigger: TTGGCTGCAGGAATAGGGCAAGAATCTATTTCCTAA...TGAGTTTGGGATTCTGCCAAATGACCAACTTGATCCTGGCCCTGAGGAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS GCA 90 bp GGACAATATGTATTGAAAGGCTGTGAAGAGGTTTCTGTCTCCTGGTaGACATGGACAAGGGAACCTCTTATTCCATTTGTGGCTAGTAGA +
Preference number: 5 (lower is better)
Translates to: GQYVLKGCEEVSVSW*TWTREPLIPFVASR
Trigger: TCTACTAGCCACAAATGGAATAAGAGGTTCCCTTGTCCATGTGCACCAGGAGACAGAAACCTCTTCACAGCCTTTCAATACATATTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS CCA 90 bp AAGGGACAATATGTATTGAAAGGCTGTGAAGAGGTTTCTGTCTCCTaGTGCACATGGACAAGGGAACCTCTTATTCCATTTGTGGCTAGT +
Preference number: 5 (lower is better)
Translates to: KGQYVLKGCEEVSVS*CTWTREPLIPFVAS
Trigger: ACTAGCCACAAATGGAATAAGAGGTTCCCTTGTCCATGTGCACCAGGAGACAGAAACCTCTTCACAGCCTTTCAATACATATTGTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTCAAGGATTGCTTGCTaGGCCTTAGCTGGAATCTTG +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYSRIAC*ALAGIL
Trigger: CAAGATTCCAGCTAAGGCCAAGCAAGCAATCCTTGA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAGACTGGACAATATTTaGTTGATTGGGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLRLDNI*LIGRWP
Trigger: GGGCCATCTCCCAATCAACAAAATATTGTCCAGTCT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 90 bp TTTTTGGAGTGCGCGGACTATTCAAAGAATGCAATGTGTTGCCGCTaGAGACATTATCAGAAAAGTCAGCATCCACAAACTTTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: FLECADYSKNAMCCR*RHYQKSQHPQTLSQ
Trigger: CTGACTCAAAGTTTGTGGATGCTGACTTTTCTGATAATGTCTGCAGCGGCAACACATTGCATTCTTTGAATAGTCCGCGCACTCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 90 bp TATGTATTGAAAGGCTGTGAAGAGGTTTCTGTCTCCTGGTGCACATaGACAAGGGAACCTCTTATTCCATTTGTGGCTAGTAGACATCTT +
Preference number: 5 (lower is better)
Translates to: YVLKGCEEVSVSWCT*TREPLIPFVASRHL
Trigger: AAGATGTCTACTAGCCACAAATGGAATAAGAGGTTCCCTTGTCCATGTGCACCAGGAGACAGAAACCTCTTCACAGCCTTTCAATACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS-3UTR CAA 90 bp TGTCCAGGAATACAGGTAAAGGGTTCTGCGTACAGAAAATGGGTCCCGCTACATGGAGTACTTTTTGTATaGATCTCAAACGTGGGATAT +
Preference number: 5 (lower is better)
Translates to: CPGIQVKGSAYRKWVPLHGVLFV*ISNVGY
Trigger: ATATCCCACGTTTGAGATCAATACAAAAAGTACTCC...ATGTAGCGGGACCCATTTTCTGTACGCAGAACCCTTTACCTGTATTCCTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTTTTCAGTGCCCTGTaGATGCGAGTCAGCAATATC +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYFFSAL*MRVSNI
Trigger: GATATTGCTGACTCGCATCAACAGGGCACTGAAAAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAACTCAGGGTTCAAGTaGAACAGCATCATTGAACAC +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLNSGFK*NSIIEH
Trigger: GTGTTCAATGATGCTGTTCAACTTGAACCCTGAGTT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS TCA 90 bp CAGATTTCATCTACTTCTTCGGACAGTTTATCAGATACAGGCTTATaGGGCATAGACAAGTTACCACTGGGAGAGTCATACAGCAAACTC +
Preference number: 5 (lower is better)
Translates to: QISSTSSDSLSDTGL*GIDKLPLGESYSKL
Trigger: GAGTTTGCTGTATGACTCTCCCAGTGGTAACTTGTCTATGCCTCATAAGCCTGTATCTGATAAACTGTCCGAAGAAGTAGATGAAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACAACCTTTTGGATGTCTaGTGCTGTTTCACTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYNLLDV*CCFTGL
Trigger: AAGACCAGTGAAACAGCACAAGACATCCAAAAGGTT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACTTAGGAAATAGATTCTaGCCCTATTCCTGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYLGNRF*PYSCSQ
Trigger: TTGGCTGCAGGAATAGGGCAAGAATCTATTTCCTAA...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp AGCACAAAAACCCTAAAATGGGCACCTCAGACTGCAGTCCAATTTACAGATCTCAAGGGTAAATTTCTATaGACCACCACAACTTTCTGT +
Preference number: 5 (lower is better)
Translates to: STKTLKWAPQTAVQFTDLKGKFL*TTTTFC
Trigger: ACAGAAAGTTGTGGTGGTCAATAGAAATTTACCCTT...GAGATCTGTAAATTGGACTGCAGTCTGAGGTGCCCATTTTAGGGTTTTTGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACAGCTCATGCTTAACTTaGTATCGATTAGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYSSCLT*YRLETG
Trigger: GCCTGTTTCTAATCGATACAAAGTTAAGCATGAGCT...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS-3UTR CAA 90 bp TCAGACTGCAGTCCAATTTACAGATCTCTGGCTTACGTTATCCTAAGGTGTTACGGAGTACTTTTTGTATaGATCTCAAACGTGGGATAT +
Preference number: 5 (lower is better)
Translates to: SDCSPIYRSLAYVILRCYGVLFV*ISNVGY
Trigger: ATATCCCACGTTTGAGATCAATACAAAAAGTACTCC...GTAACACCTTAGGATAACGTAAGCCAGAGATCTGTAAATTGGACTGCAGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 90 bp GTAAGAGTTGCTATCACAGTACAAAGTGTTCTGATAAAGTACCAATaGAAATATAAACCTGGAGATGGAGAGTGGGAGATAAAAGGTACA +
Preference number: 5 (lower is better)
Translates to: VRVAITVQSVLIKYQ*KYKPGDGEWEIKGT
Trigger: TGTACCTTTTATCTCCCACTCTCCATCTCCAGGTTTATATTTTCATTGGTACTTTATCAGAACACTTTGTACTGTGATAGCAACTCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS GCA 72 bp CTCATCAGTCTTCACCCGGGGAGGGACGGCTTCGCATaGCCGGGCGGCGCTCGCAGGTCGGGCGGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: LISLHPGRDGFA*PGGARRSGGEG
Trigger: ACCCTCCCCGCCCGACCTGCGAGCGCCGCCCGGGCATGCGAAGCCGTCCCTCCCCGGGTGAAGACTGATGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS GCA 72 bp ATTCACTCTCCTTTCCCGGGGAGGGACGGCTTCGCATaGCCGGGCGGCGCTCGCAGGTCGGGCGGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: IHSPFPGRDGFA*PGGARRSGGEG
Trigger: ACCCTCCCCGCCCGACCTGCGAGCGCCGCCCGGGCATGCGAAGCCGTCCCTCCCCGGGAAAGGAGAGTGAAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367326.1
CDS TCA 72 bp CGCGGCTGGCTCTGCCAGCCCTGCTCTTCACGGGCGTaGGGAGAGCCTGGCTCTCAGGCAGGGACAGCGTGG +
Preference number: 6 (lower is better)
Translates to: RGWLCQPCSSRA*GEPGSQAGTAW
Trigger: CCACGCTGTCCCTGCCTGAGAGCCAGGCTCTCCTCACGCCCGTGAAGAGCAGGGCTGGCAGAGCCAGCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 72 bp CTGGGTGGCCTTTCGCTGCCCTCATCCGCGTTCTGTTaGCCCGTGGCGGGGTTGTCCCTCTGCAGCTCGCTG +
Preference number: 6 (lower is better)
Translates to: LGGLSLPSSAFC*PVAGLSLCSSL
Trigger: CAGCGAGCTGCAGAGGGACAACCCCGCCACGGGGCAACAGAACGCGGATGAGGGCAGCGAAAGGCCACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS GCA 72 bp AGTCCACTCTCCACTGCGCTCTGGGTGGCCTTTCGCTaGCCTCATCCGCGTTCTGTTGCCCCGTGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: SPLSTALWVAFR*PHPRSVAPWRG
Trigger: ACCCCGCCACGGGGCAACAGAACGCGGATGAGGGCAGCGAAAGGCCACCCAGAGCGCAGTGGAGAGTGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CAA 72 bp TCTGGGTGGCCTTTCGCTGCCCTCATCCGCGTTCTGTaGCCCCGTGGCGGGGTTGTCCCTCTGCAGCTCGCT +
Preference number: 6 (lower is better)
Translates to: SGWPFAALIRVL*PRGGVVPLQLA
Trigger: AGCGAGCTGCAGAGGGACAACCCCGCCACGGGGCAACAGAACGCGGATGAGGGCAGCGAAAGGCCACCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CAA 90 bp GCTTGGGGCTCGTGGCCGAGTCTGCGATCGTCTTGGGTGCCCCGTTaGAGTCCACTCTCCACTGCGCTCTGGGTGGCCTTTCGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: AWGSWPSLRSSWVPR*SPLSTALWVAFRCP
Trigger: AGGGCAGCGAAAGGCCACCCAGAGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 72 bp GGAGCTTGGGGCTCGTGGCCGAGTCTGCGATCGTCTTaGGTGCCCCGTTTGAGTCCACTCTCCACTGCGCTC +
Preference number: 6 (lower is better)
Translates to: GAWGSWPSLRSS*VPRLSPLSTAL
Trigger: GAGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 72 bp CCTCCATCCTCTGACCAAAGCCCCCACCATAGCTGCTaGCAGCATGCTCCCCAGGTCGCCGTGGTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: PPSSDQSPHHSC*QHAPQVAVVLP
Trigger: AGGCAGGACCACGGCGACCTGGGGAGCATGCTGCCAGCAGCTATGGTGGGGGCTTTGGTCAGAGGATGGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS TCA 72 bp CGTGGCCGAGTCTGCGATCGTCTTGGGTGCCCCGTTTaGGTCCACTCTCCACTGCGCTCTGGGTGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: RGRVCDRLGCPV*VHSPLRSGWPF
Trigger: GAAAGGCCACCCAGAGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS GCA 72 bp CCCACGTCCCGGCTCAGCTCAGGGGTGCTCTCTGCGTaGAGCCTGTCTGGCACATCATCCTTGCTCACAGGA +
Preference number: 6 (lower is better)
Translates to: PTSRLSSGVLSA*SLSGTSSLLTG
Trigger: TCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAGCTGAGCCGGGACGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 72 bp AGGAGCTTGGGGCTCGTGGCCGAGTCTGCGATCGTCTaGGGTGCCCCGTTTGAGTCCACTCTCCACTGCGCT +
Preference number: 6 (lower is better)
Translates to: RSLGLVAESAIV*GAPFESTLHCA
Trigger: AGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CAA 72 bp TCGTGGCCGAGTCTGCGATCGTCTTGGGTGCCCCGTTaGAGTCCACTCTCCACTGCGCTCTGGGTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: SWPSLRSSWVPR*SPLSTALWVAF
Trigger: AAAGGCCACCCAGAGCGCAGTGGAGAGTGGACTCAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 72 bp GCTCAGCTCAGGGGTGCTCTCTGCGTGCAGCCTGTCTaGCACATCATCCTTGCTCACAGGAAACGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: AQLRGALCVQPV*HIILAHRKRCQ
Trigger: CTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp AGCTCAGGGGTGCTCTCTGCGTGCAGCCTGTCTGGCACATCATCCTaGCTCACAGGAAACGCTGCCAGGAGACGGTCTCTGGCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: SSGVLSACSLSGTSS*LTGNAARRRSLALS
Trigger: AGACAAGGCCAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCACCCCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp GAAGGAACCATGGCTGTCGCGGGAAGAGGCCGAGGATaGTGTGGAACCGAAGCTGACGGGTCGGTCACTATC +
Preference number: 6 (lower is better)
Translates to: EGTMAVAGRGRG*CGTEADGSVTI
Trigger: GATAGTGACCGACCCGTCAGCTTCGGTTCCACATCATCCTCGGCCTCTTCCCGCGACAGCCATGGTTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS TCA 72 bp GTGGCTCACGCCTATAATCCTAGCACTTTCCGAGGCTaGGGTGGGCGGTCAGGAGTTCAAGACCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: VAHAYNPSTFRG*GGRSGVQDQPG
Trigger: GCCAGGCTGGTCTTGAACTCCTGACCGCCCACCTCAGCCTCGGAAAGTGCTAGGATTATAGGCGTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS GCA 72 bp AGAGGAAGAGCGTCCGCTCATTCTTGGCTCGCTGGATaGGGAAGGTTCCCTCAAGCACCAGTTCCCCGTAGC +
Preference number: 6 (lower is better)
Translates to: RGRASAHSWLAG*GRFPQAPVPRS
Trigger: GCTACGGGGAACTGGTGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCTCTTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS GCA 72 bp TGCTCTCTGCGTGCAGCCTGTCTGGCACATCATCCTTaGTCACAGGAAACGCTGCCAGGAGACGGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: CSLRAACLAHHP*SQETLPGDGLW
Trigger: CCAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp TCGAAGAGGAAGAGCGTCCGCTCATTCTTGGCTCGCTaGATGCGGAAGGTTCCCTCAAGCACCAGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: SKRKSVRSFLAR*MRKVPSSTSSP
Trigger: CGGGGAACTGGTGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCTCTTCCTCTTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CAA 72 bp GTGCTCTCTGCGTGCAGCCTGTCTGGCACATCATCCTaGCTCACAGGAAACGCTGCCAGGAGACGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: VLSACSLSGTSS*LTGNAARRRSL
Trigger: CAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGGCTGCACGCAGAGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp GTGATGAGCAGCAGCTTGTCGAAGAGGAAGAGCGTCCGCTCATTCTaGGCTCGCTGGATGCGGAAGGTTCCCTCAAGCACCAGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: VMSSSLSKRKSVRSF*ARWMRKVPSSTSSP
Trigger: CGGGGAACTGGTGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCTCTTCCTCTTCGACAAGCTGCTGCTCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CAA 90 bp GGCCTGATGGTAAGGGGCTTCGTCCTCACTGAGCTGGAGGCTGTCTaGGGAAACAAATGGCCTCAGGCTGTCACAGCACACGAAGTCGGC +
Preference number: 6 (lower is better)
Translates to: GLMVRGFVLTELEAV*GNKWPQAVTAHEVG
Trigger: GCCGACTTCGTGTGCTGTGACAGCCTGAGGCCATTTGTTTCCCAAGACAGCCTCCAGCTCAGTGAGGACGAAGCCCCTTACCATCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp ATAAAGGAGCCTTCTTTAGAAATCAGGTCTTCCTCAAAGGGGCAGTaGGCGCGGCTGGCTCTGCCAGCCCTGCTCTTCACGGGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: IKEPSLEIRSSSKGQ*ARLALPALLFTGVR
Trigger: CCTCACGCCCGTGAAGAGCAGGGCTGGCAGAGCCAGCCGCGCCAACTGCCCCTTTGAGGAAGACCTGATTTCTAAAGAAGGCTCCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp CGCGGGAAGAGGCCGAGGATGATGTGGAACCGAAGCTaGCGGGTCGGTCACTATCAGAGAGCTCCATTGTCT +
Preference number: 6 (lower is better)
Translates to: RGKRPRMMWNRS*RVGHYQRAPLS
Trigger: AGACAATGGAGCTCTCTGATAGTGACCGACCCGTCAGCTTCGGTTCCACATCATCCTCGGCCTCTTCCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS TCA 72 bp GACCGTCGGCTGGGAAACAAGGCTTGCCTGATCTGGTaGTCGGTCCAGATGTTTCTGAGAGCTCCACCCGCT +
Preference number: 6 (lower is better)
Translates to: DRRLGNKACLIW*SVQMFLRAPPA
Trigger: AGCGGGTGGAGCTCTCAGAAACATCTGGACCGATCACCAGATCAGGCAAGCCTTGTTTCCCAGCCGACGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp CTCTGGGGTGCTCTTGGGGCGAACGGAGTCCCTGGCTaGTTTAGAGGGAGTGGATTCAGCTTCTTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: LWGALGANGVPG*FRGSGFSFFPL
Trigger: AAGCGGGAAGAAGCTGAATCCACTCCCTCTAAATCAGCCAGGGACTCCGTTCGCCCCAAGAGCACCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp GAACAACTCTATCCACATAGAGGAGCTTGGGGCTCGTaGCCGAGTCTGCGATCGTCTTGGGTGCCCCGTTTG +
Preference number: 6 (lower is better)
Translates to: EQLYPHRGAWGS*PSLRSSWVPRL
Trigger: CAAACGGGGCACCCAAGACGATCGCAGACTCGGCCACGAGCCCCAAGCTCCTCTATGTGGATAGAGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CCA 72 bp GCAGCTTGTCGAAGAGGAAGAGCGTCCGCTCATTCTTaGCTCGCTGGATGCGGAAGGTTCCCTCAAGCACCA +
Preference number: 6 (lower is better)
Translates to: AACRRGRASAHS*LAGCGRFPQAP
Trigger: TGGTGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCTCTTCCTCTTCGACAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CCA 72 bp GTCCTCACTGAGCTGGAGGCTGTCTTGGGAAACAAATaGCCTCAGGCTGTCACAGCACACGAAGTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: VLTELEAVLGNK*PQAVTAHEVGL
Trigger: GAGGCCGACTTCGTGTGCTGTGACAGCCTGAGGCCATTTGTTTCCCAAGACAGCCTCCAGCTCAGTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 72 bp AGCAGCTTGTCGAAGAGGAAGAGCGTCCGCTCATTCTaGGCTCGCTGGATGCGGAAGGTTCCCTCAAGCACC +
Preference number: 6 (lower is better)
Translates to: SSLSKRKSVRSF*ARWMRKVPSST
Trigger: GGTGCTTGAGGGAACCTTCCGCATCCAGCGAGCCAAGAATGAGCGGACGCTCTTCCTCTTCGACAAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CAA 72 bp GGCCTCCATCCCCAGGTCAGGGTTTTCTGGGTCTGTTaGAGACAGGCCACTGTTGGCCAGGTCGTAGGGATT +
Preference number: 6 (lower is better)
Translates to: GLHPQVRVFWVC*RQATVGQVVGI
Trigger: AATCCCTACGACCTGGCCAACAGTGGCCTGTCTCAAACAGACCCAGAAAACCCTGACCTGGGGATGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp ATCATCCTCATTCTCCTGCGGGGACCGTCGGCTGGGAAACAAGGCTaGCCTGATCTGGTGATCGGTCCAGATGTTTCTGAGAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: IILILLRGPSAGKQG*PDLVIGPDVSESST
Trigger: GGTGGAGCTCTCAGAAACATCTGGACCGATCACCAGATCAGGCAAGCCTTGTTTCCCAGCCGACGGTCCCCGCAGGAGAATGAGGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp AAAGAGAGCCCTTACTGTGGCCAGCTTGCCTCTTTGTaGAGGCTAACTCTGGGGTGCTCTTGGGGCGAACGG +
Preference number: 6 (lower is better)
Translates to: KESPYCGQLASL*RLTLGCSWGER
Trigger: CCGTTCGCCCCAAGAGCACCCCAGAGTTAGCCTTCACAAAGAGGCAAGCTGGCCACAGTAAGGGCTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp CTTATCTGTGGCCTCCATCCCCAGGTCAGGGTTTTCTaGGTCTGTTTGAGACAGGCCACTGTTGGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: LICGLHPQVRVF*VCLRQATVGQV
Trigger: GACCTGGCCAACAGTGGCCTGTCTCAAACAGACCCAGAAAACCCTGACCTGGGGATGGAGGCCACAGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 72 bp ATTCTCCTGCGGGGACCGTCGGCTGGGAAACAAGGCTaGCCTGATCTGGTGATCGGTCCAGATGTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: ILLRGPSAGKQG*PDLVIGPDVSE
Trigger: CTCAGAAACATCTGGACCGATCACCAGATCAGGCAAGCCTTGTTTCCCAGCCGACGGTCCCCGCAGGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 72 bp GCTTGCCTCTTTGTGAAGGCTAACTCTGGGGTGCTCTaGGGGCGAACGGAGTCCCTGGCTGATTTAGAGGGA +
Preference number: 6 (lower is better)
Translates to: ACLFVKANSGVL*GRTESLADLEG
Trigger: TCCCTCTAAATCAGCCAGGGACTCCGTTCGCCCCAAGAGCACCCCAGAGTTAGCCTTCACAAAGAGGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp CTTATCTGTGGCCTCCATCCCCAGGTCAGGGTTTTCTGGGTCTGTTaGAGACAGGCCACTGTTGGCCAGGTCGTAGGGATTGTCCATGAG +
Preference number: 6 (lower is better)
Translates to: LICGLHPQVRVFWVC*RQATVGQVVGIVHE
Trigger: CTCATGGACAATCCCTACGACCTGGCCAACAGTGGCCTGTCTCAAACAGACCCAGAAAACCCTGACCTGGGGATGGAGGCCACAGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 72 bp GCGTGCTTTGGCTGGATGCCTCTCCACCTGAGAGGGTaGCATCTGTTTGTGCGTAAAGAGAGCCCTTACTGT +
Preference number: 6 (lower is better)
Translates to: ACFGWMPLHLRG*HLFVRKESPYC
Trigger: ACAGTAAGGGCTCTCTTTACGCACAAACAGATGGCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 72 bp CATAGATGTTCTCCTCAACCGCTTGGAGTTCATGCGTaGTTTGGCTGGATGCCTCTCCACCTGAGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: HRCSPQPLGVHA*FGWMPLHLRGC
Trigger: GCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAACATCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 72 bp TACTCAGCAATCCTGGCACCAATGGCGGGCCCTCCTTaGTTCTTCTCTTCCAAGATGGCAGCCAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: YSAILAPMAGPP*FFSSKMAARSL
Trigger: CAAAGACCTGGCTGCCATCTTGGAAGAGAAGAAGCAAGGAGGGCCCGCCATTGGTGCCAGGATTGCTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp TCTCCTCAACCGCTTGGAGTTCATGCGTGCTTTGGCTaGATGCCTCTCCACCTGAGAGGGTGCCATCTGTTT +
Preference number: 6 (lower is better)
Translates to: SPQPLGVHACFG*MPLHLRGCHLF
Trigger: AAACAGATGGCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp ATGTTCTCCTCAACCGCTTGGAGTTCATGCGTGCTTTaGCTGGATGCCTCTCCACCTGAGAGGGTGCCATCT +
Preference number: 6 (lower is better)
Translates to: MFSSTAWSSCVL*LDASPPERVPS
Trigger: AGATGGCACCCTCTCAGGTGGAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp GAATGCAGAAGCCAGTCTCCACTACCATGGTGGACCTaGGAAGGTGACACAGACCTCAGGAGGGAGGATTCT +
Preference number: 6 (lower is better)
Translates to: ECRSQSPLPWWT*EGDTDLRREDS
Trigger: AGAATCCTCCCTCCTGAGGTCTGTGTCACCTTCCCAGGTCCACCATGGTAGTGGAGACTGGCTTCTGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 72 bp GTTCTGTCACTAGTTCCTATTTCAGGAGGGCATGTGTaGCTCTCCCCAGCACTGCTGGCCCGCCTGACAATC +
Preference number: 6 (lower is better)
Translates to: VLSLVPISGGHV*LSPALLARLTI
Trigger: GATTGTCAGGCGGGCCAGCAGTGCTGGGGAGAGCAACACATGCCCTCCTGAAATAGGAACTAGTGACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp GCTGACGGGTCGGTCACTATCAGAGAGCTCCATTGTCTTCAGTTCTaGAGGGCAGGAACGCCTGGCTGTCGTCTTGGGATGTGGAACTTT +
Preference number: 6 (lower is better)
Translates to: ADGSVTIRELHCLQF*RAGTPGCRLGMWNF
Trigger: AAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAATGGAGCTCTCTGATAGTGACCGACCCGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS TCA 72 bp CGGTCACTATCAGAGAGCTCCATTGTCTTCAGTTCTTaGGGGCAGGAACGCCTGGCTGTCGTCTTGGGATGT +
Preference number: 6 (lower is better)
Translates to: RSLSESSIVFSS*GQERLAVVLGC
Trigger: ACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAATGGAGCTCTCTGATAGTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS TCA 72 bp AGGCTGACTATTTCTCTGGGCAGGAGACGGCCTTGCTaGAGACAGCTGGGGAGATCCTTCCTCTCTAGAAAC +
Preference number: 6 (lower is better)
Translates to: RLTISLGRRRPC*RQLGRSFLSRN
Trigger: GTTTCTAGAGAGGAAGGATCTCCCCAGCTGTCTTCAGCAAGGCCGTCTCCTGCCCAGAGAAATAGTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS TCA 72 bp GCTCGAAGCACGCTGATCATGGTAGAACTGCTAGGCTaGCTATTTCTCTGGGCAGGAGACGGCCTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: ARSTLIMVELLG*LFLWAGDGLAE
Trigger: TTCAGCAAGGCCGTCTCCTGCCCAGAGAAATAGTCAGCCTAGCAGTTCTACCATGATCAGCGTGCTTCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS TCA 72 bp GGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATCCTG +
Preference number: 6 (lower is better)
Translates to: GCRLGMWNFGYS*WHFKTQLVPIL
Trigger: CAGGATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS TCA 72 bp GGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATCTCC +
Preference number: 6 (lower is better)
Translates to: GCRLGMWNFGYS*WHFKTQLVPIS
Trigger: GGAGATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS GCA 72 bp AGTCTCTTTAGGTGCAGAACCCAGAGGCGTTTGTCTTaGTGGGATTTGGCCTGGACTGTGTGCTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SLFRCRTQRRLS*WDLAWTVCCSL
Trigger: CAAGCTGCAGCACACAGTCCAGGCCAAATCCCAGCAAGACAAACGCCTCTGGGTTCTGCACCTAAAGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS GCA 72 bp GAGCTGGAGGTCTCTGTGGACTCCATCTGTCCCATATaGCAGCTGCAAGGGCGACTAGAAGTGCTATCTTCA +
Preference number: 6 (lower is better)
Translates to: ELEVSVDSICPI*QLQGRLEVLSS
Trigger: TGAAGATAGCACTTCTAGTCGCCCTTGCAGCTGGCATATGGGACAGATGGAGTCCACAGAGACCTCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp GTGACACAGACCTCAGGAGGGAGGATTCTTGAGGGCTaGCCCAGCCATCCTTCTGAATTTTCAAGGGAGACT +
Preference number: 6 (lower is better)
Translates to: VTQTSGGRILEG*PSHPSEFSRET
Trigger: AGTCTCCCTTGAAAATTCAGAAGGATGGCTGGGCCAGCCCTCAAGAATCCTCCCTCCTGAGGTCTGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp GAATGGCTCCATCTTTCCTTCAGACGTCCTATGCCCTaGATACTAGCGCAGAGGGGTCCGTGTGTCAACTCA +
Preference number: 6 (lower is better)
Translates to: EWLHLSFRRPMP*ILAQRGPCVNS
Trigger: TGAGTTGACACACGGACCCCTCTGCGCTAGTATCCAGGGCATAGGACGTCTGAAGGAAAGATGGAGCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS CAA 72 bp GAGCCCTATGGTGTCATAGATGTTCTCCTCAACCGCTaGGAGTTCATGCGTGCTTTGGCTGGATGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: EPYGVIDVLLNR*EFMRALAGCLS
Trigger: GGAGAGGCATCCAGCCAAAGCACGCATGAACTCCAAGCGGTTGAGGAGAACATCTATGACACCATAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp GGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATCTCT +
Preference number: 6 (lower is better)
Translates to: GCRLGMWNFGYS*WHFKTQLVPIS
Trigger: AGAGATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS GCA 72 bp ACAAGCCCATGTGGCTATTTGAAACTAAGGTCATTCTaGTGCCGAAGGAACCATGGCTGTCGCGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: TSPCGYLKLRSF*CRRNHGCRGKR
Trigger: CCTCTTCCCGCGACAGCCATGGTTCCTTCGGCAGCAGAATGACCTTAGTTTCAAATAGCCACATGGGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS GCA 72 bp CCTGTCTGGCACATCATCCTTGCTCACAGGAAACGCTaGCAGGAGACGGTCTCTGGCCTTGTCTTCATTTTT +
Preference number: 6 (lower is better)
Translates to: PVWHIILAHRKR*QETVSGLVFIF
Trigger: AAAAATGAAGACAAGGCCAGAGACCGTCTCCTGGCAGCGTTTCCTGTGAGCAAGGATGATGTGCCAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp TCAGTTCTTGAGGGCAGGAACGCCTGGCTGTCGTCTTaGGATGTGGAACTTTGGTTACAGCTGATGGCACTT +
Preference number: 6 (lower is better)
Translates to: SVLEGRNAWLSS*DVELWLQLMAL
Trigger: AAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTCAAGAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS CCA 72 bp GCTCCATTGTCTTCAGTTCTTGAGGGCAGGAACGCCTaGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAG +
Preference number: 6 (lower is better)
Translates to: APLSSVLEGRNA*LSSWDVELWLQ
Trigger: CTGTAACCAAAGTTCCACATCCCAAGACGACAGCCAGGCGTTCCTGCCCTCAAGAACTGAAGACAATGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS CCA 72 bp TTTGAAACTAAGGTCATTCTGCTGCCGAAGGAACCATaGCTGTCGCGGGAAGAGGCCGAGGATGATGTGGAA +
Preference number: 6 (lower is better)
Translates to: FETKVILLPKEP*LSREEAEDDVE
Trigger: TTCCACATCATCCTCGGCCTCTTCCCGCGACAGCCATGGTTCCTTCGGCAGCAGAATGACCTTAGTTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358517.6
ENST00000367326.1
ENST00000644913.1
ENST00000644968.1
CDS CCA 72 bp CTTGTAGTGGAAGACGCTGAAGCTGAGCGGCTCTTTTaGAATCACCTCCACAAGCATGAGGTTGCCACACAG +
Preference number: 6 (lower is better)
Translates to: LVVEDAEAERLF*NHLHKHEVATQ
Trigger: CTGTGTGGCAACCTCATGCTTGTGGAGGTGATTCCAAAAGAGCCGCTCAGCTTCAGCGTCTTCCACTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CCA 72 bp TTTCTCTGGGCAGGAGACGGCCTTGCTGAAGACAGCTaGGGAGATCCTTCCTCTCTAGAAACCTTTTGGATG +
Preference number: 6 (lower is better)
Translates to: FLWAGDGLAEDS*GDPSSLETFWM
Trigger: CATCCAAAAGGTTTCTAGAGAGGAAGGATCTCCCCAGCTGTCTTCAGCAAGGCCGTCTCCTGCCCAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CAA 72 bp TGGATCCTGCCGGATGTAAGCCCATCAGTGCGGGCATaGAGTATGGTTACTGCCCTTCATGATGTAAGTGGC +
Preference number: 6 (lower is better)
Translates to: WILPDVSPSVRA*SMVTALHDVSG
Trigger: GCCACTTACATCATGAAGGGCAGTAACCATACTCAATGCCCGCACTGATGGGCTTACATCCGGCAGGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS CAA 90 bp CCCAGGCCCCTTCAATATTCCCATATTTCACTCGCCTGTGATGCTTaGGCCCAGAACACGATTTGTCCAGGCAGCAGTTTCCTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: PRPLQYSHISLACDA*AQNTICPGSSFLPL
Trigger: AAGAGGCAGGAAACTGCTGCCTGGACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGAGTGAAATATGGGAATATTGAAGGGGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS CAA 90 bp GCGAGTCAGCAATATCTGGCAGCAAGTCCTGGTGACTCTCACACCTaGAACTTCTGTGTAAAGACAGCAGCTGCTGCTTTCCCACATCAC +
Preference number: 6 (lower is better)
Translates to: ASQQYLAASPGDSHT*NFCVKTAAAAFPHH
Trigger: GTGATGTGGGAAAGCAGCAGCTGCTGTCTTTACACAGAAGTTCAAGGTGTGAGAGTCACCAGGACTTGCTGCCAGATATTGCTGACTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp CTCCACTCAGGCTTAAGCACATCGTCTGCCTTCAGCTaGTGCAGTGACCTCAGTCAGGTAAAAGAAACAGCC +
Preference number: 6 (lower is better)
Translates to: LHSGLSTSSAFS*CSDLSQVKETA
Trigger: GGCTGTTTCTTTTACCTGACTGAGGTCACTGCATCAGCTGAAGGCAGACGATGTGCTTAAGCCTGAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358517.6
CDS TCA 72 bp CCCCACGGATGGTGGAGCAGAGAGATGGGAAGAAACTaGGTCCTCAGTGATGTTTCTGAGTCACTGAACCAA +
Preference number: 6 (lower is better)
Translates to: PHGWWSREMGRN*VLSDVSESLNQ
Trigger: TTGGTTCAGTGACTCAGAAACATCACTGAGGACTCAGTTTCTTCCCATCTCTCTGCTCCACCATCCGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS TCA 72 bp CAGGCCCCTTCAATATTCCCATATTTCACTCGCCTGTaGTGCTTTGGCCCAGAACACGATTTGTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: QAPSIFPYFTRL*CFGPEHDLSRQ
Trigger: CTGCCTGGACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGAGTGAAATATGGGAATATTGAAGGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS CAA 72 bp AACGTGTCATCTCTCTTCTTCGTGATGAGCAGCAGCTaGTCGAAGAGGAAGAGCGTCCGCTCATTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: NVSSLFFVMSSS*SKRKSVRSFLA
Trigger: AGCCAAGAATGAGCGGACGCTCTTCCTCTTCGACAAGCTGCTGCTCATCACGAAGAAGAGAGATGACACGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CAA 90 bp TTGTATGTAAACGTGTCATCTCTCTTCTTCGTGATGAGCAGCAGCTaGTCGAAGAGGAAGAGCGTCCGCTCATTCTTGGCTCGCTGGATG +
Preference number: 6 (lower is better)
Translates to: LYVNVSSLFFVMSSS*SKRKSVRSFLARWM
Trigger: CATCCAGCGAGCCAAGAATGAGCGGACGCTCTTCCTCTTCGACAAGCTGCTGCTCATCACGAAGAAGAGAGATGACACGTTTACATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000475490.1
ENST00000644968.1
CDS CAA 90 bp GCTCTGGTGGGAGACAGAAATCTGCTAACTCTCCATTACTATAGGTaGAATGCAGAAGCCAGTCTCCACTACCATGGTGGACCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: ALVGDRNLLTLHYYR*NAEASLHYHGGPGK
Trigger: CTTCCCAGGTCCACCATGGTAGTGGAGACTGGCTTCTGCATTCAACCTATAGTAATGGAGAGTTAGCAGATTTCTGTCTCCCACCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp TGGAGTGTGAGATCTGAGAGTTTTTCAGTGCCCTGTTaGTGCGAGTCAGCAATATCTGGCAGCAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WSVRSESFSVPC*CESAISGSKSW
Trigger: CCAGGACTTGCTGCCAGATATTGCTGACTCGCATCAACAGGGCACTGAAAAACTCTCAGATCTCACACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp GGCTGTCGTCTTGGGATGTGGAACTTTGGTTACAGCTaGTGGCACTTCAAGACGCAACTGGTGCCCATTTTT +
Preference number: 6 (lower is better)
Translates to: GCRLGMWNFGYS*WHFKTQLVPIF
Trigger: AAAAATGGGCACCAGTTGCGTCTTGAAGTGCCATCAGCTGTAACCAAAGTTCCACATCCCAAGACGACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367326.1
ENST00000644996.1
CDS TCA 72 bp TGGCTCGGTCGGATAAGAAGTTTTGACTCAGCCCTTTaGGGAGAGCTTCGATTCCTCCATCCTCTGACCAAA +
Preference number: 6 (lower is better)
Translates to: WLGRIRSFDSAL*GELRFLHPLTK
Trigger: TTTGGTCAGAGGATGGAGGAATCGAAGCTCTCCTCAAAGGGCTGAGTCAAAACTTCTTATCCGACCGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS CAA 72 bp GCGCAGAGGGGTCCGTGTGTCAACTCAGGGTTCAAGTaGAACAGCATCATTGAACACTCTGTCATCCTTAGT +
Preference number: 6 (lower is better)
Translates to: AQRGPCVNSGFK*NSIIEHSVILS
Trigger: ACTAAGGATGACAGAGTGTTCAATGATGCTGTTCAACTTGAACCCTGAGTTGACACACGGACCCCTCTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS CAA 90 bp TCTATGGATGACCCAAAGGGAGTCATCTCCTCCTGCCCTTCTGTTTaGGGGCTGTTCTGCAGTTCCCTAGTTCTGTCACTAGTTCCTATT +
Preference number: 6 (lower is better)
Translates to: SMDDPKGVISSCPSV*GLFCSSLVLSLVPI
Trigger: AATAGGAACTAGTGACAGAACTAGGGAACTGCAGAACAGCCCCAAAACAGAAGGGCAGGAGGAGATGACTCCCTTTGGGTCATCCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp TGCAATTCCATCTTGGCTCGGTCGGATAAGAAGTTTTaGCTCAGCCCTTTGAGGAGAGCTTCGATTCCTCCA +
Preference number: 6 (lower is better)
Translates to: CNSILARSDKKF*LSPLRRASIPP
Trigger: TGGAGGAATCGAAGCTCTCCTCAAAGGGCTGAGTCAAAACTTCTTATCCGACCGAGCCAAGATGGAATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644913.1
CDS TCA 72 bp CGCAGAGGGGTCCGTGTGTCAACTCAGGGTTCAAGTTaGACAGCATCATTGAACACTCTGTCATCCTTAGTT +
Preference number: 6 (lower is better)
Translates to: RRGVRVSTQGSS*TASLNTLSSLV
Trigger: AACTAAGGATGACAGAGTGTTCAATGATGCTGTTCAACTTGAACCCTGAGTTGACACACGGACCCCTCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS GCA 72 bp GTCATCTCCTCCTGCCCTTCTGTTTTGGGGCTGTTCTaGAGTTCCCTAGTTCTGTCACTAGTTCCTATTTCA +
Preference number: 6 (lower is better)
Translates to: VISSCPSVLGLF*SSLVLSLVPIS
Trigger: TGAAATAGGAACTAGTGACAGAACTAGGGAACTGCAGAACAGCCCCAAAACAGAAGGGCAGGAGGAGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp AGTTGTAAAGATGGTCCTGACACCAGTTCTCTTTGTTaGGCTGACTTACTACCACGCTGCATCTCTGCACAG +
Preference number: 6 (lower is better)
Translates to: SCKDGPDTSSLC*ADLLPRCISAQ
Trigger: CTGTGCAGAGATGCAGCGTGGTAGTAAGTCAGCCCAACAAAGAGAACTGGTGTCAGGACCATCTTTACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp GGCACAGAGCAAGCTGCGGACAATTGCCTGGGAGTACTTTTTGTATaGATCTCAAACGTGGGATATCTTGACCTCAAGTCTTGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: GTEQAADNCLGVLFV*ISNVGYLDLKSCSG
Trigger: ACCAGAGCAAGACTTGAGGTCAAGATATCCCACGTTTGAGATCAATACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTTGCTCTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp TGGATACTAGCGCAGAGGGGTCCGTGTGTCAACTCAGGGTTCAAGTaGAACAGCATCATTGAACACTCTGTCATCCTTAGTTTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: WILAQRGPCVNSGFK*NSIIEHSVILSLPV
Trigger: AACTGGCAAACTAAGGATGACAGAGTGTTCAATGATGCTGTTCAACTTGAACCCTGAGTTGACACACGGACCCCTCTGCGCTAGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS TCA 72 bp ATCAGTGCGGGCATTGAGTATGGTTACTGCCCTTCATaGTGTAAGTGGCCACATCAGATCAAAAGAAGGGAC +
Preference number: 6 (lower is better)
Translates to: ISAGIEYGYCPS*CKWPHQIKRRD
Trigger: GTCCCTTCTTTTGATCTGATGTGGCCACTTACATCATGAAGGGCAGTAACCATACTCAATGCCCGCACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS CCA 72 bp AAAGGCTGTGAAGAGGTTTCTGTCTCCTGGTGCACATaGACAAGGGAACCTCTTATTCCATTTGTGGCTAGT +
Preference number: 6 (lower is better)
Translates to: KGCEEVSVSWCT*TREPLIPFVAS
Trigger: ACTAGCCACAAATGGAATAAGAGGTTCCCTTGTCCATGTGCACCAGGAGACAGAAACCTCTTCACAGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS CCA 72 bp TTCAATATTCCCATATTTCACTCGCCTGTGATGCTTTaGCCCAGAACACGATTTGTCCAGGCAGCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: FNIPIFHSPVML*PRTRFVQAAVS
Trigger: GGAAACTGCTGCCTGGACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGAGTGAAATATGGGAATATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS CAA 72 bp CTTCAATATTCCCATATTTCACTCGCCTGTGATGCTTaGGCCCAGAACACGATTTGTCCAGGCAGCAGTTTC +
Preference number: 6 (lower is better)
Translates to: LQYSHISLACDA*AQNTICPGSSF
Trigger: GAAACTGCTGCCTGGACAAATCGTGTTCTGGGCCAAAGCATCACAGGCGAGTGAAATATGGGAATATTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644968.1
CDS CAA 72 bp CTCCGATTAGACCTGTGGTTTCCTCAAGTGCAGAAATaGGGTCTCATCTTTGAAACCCAAGACCCACTGTCA +
Preference number: 6 (lower is better)
Translates to: LRLDLWFPQVQK*GLIFETQDPLS
Trigger: TGACAGTGGGTCTTGGGTTTCAAAGATGAGACCCAATTTCTGCACTTGAGGAAACCACAGGTCTAATCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644996.1
CDS GCA 72 bp TTGATCTCAAACGTGGGATATCTTGACCTCAAGTCTTaGTCTGGTGGGAGACAGAAATCTGCTAACTCTCCA +
Preference number: 6 (lower is better)
Translates to: LISNVGYLDLKS*SGGRQKSANSP
Trigger: TGGAGAGTTAGCAGATTTCTGTCTCCCACCAGAGCAAGACTTGAGGTCAAGATATCCCACGTTTGAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 72 bp TTGGAGTGCGCGGACTATTCAAAGAATGCAATGTGTTaGCGCTGCAGACATTATCAGAAAAGTCAGCATCCA +
Preference number: 6 (lower is better)
Translates to: LECADYSKNAMC*RCRHYQKSQHP
Trigger: TGGATGCTGACTTTTCTGATAATGTCTGCAGCGGCAACACATTGCATTCTTTGAATAGTCCGCGCACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS GCA 72 bp GTATTGAAAGGCTGTGAAGAGGTTTCTGTCTCCTGGTaGACATGGACAAGGGAACCTCTTATTCCATTTGTG +
Preference number: 6 (lower is better)
Translates to: VLKGCEEVSVSW*TWTREPLIPFV
Trigger: CACAAATGGAATAAGAGGTTCCCTTGTCCATGTGCACCAGGAGACAGAAACCTCTTCACAGCCTTTCAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS CAA 72 bp TTTGGAGTGCGCGGACTATTCAAAGAATGCAATGTGTaGCCGCTGCAGACATTATCAGAAAAGTCAGCATCC +
Preference number: 6 (lower is better)
Translates to: FGVRGLFKECNV*PLQTLSEKSAS
Trigger: GGATGCTGACTTTTCTGATAATGTCTGCAGCGGCAACACATTGCATTCTTTGAATAGTCCGCGCACTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp TGTTGCCGCTGCAGACATTATCAGAAAAGTCAGCATCCACAAACTTaGAGTCAGATTTCCTTCTACGATTGTGAGATAGCTCCAACTCCG +
Preference number: 6 (lower is better)
Translates to: CCRCRHYQKSQHPQT*SQISFYDCEIAPTP
Trigger: CGGAGTTGGAGCTATCTCACAATCGTAGAAGGAAATCTGACTCAAAGTTTGTGGATGCTGACTTTTCTGATAATGTCTGCAGCGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CAA 90 bp ACTGTTGCCCTCCGATTAGACCTGTGGTTTCCTCAAGTGCAGAAATaGGGTCTCATCTTTGAAACCCAAGACCCACTGTCATTATTCAAA +
Preference number: 6 (lower is better)
Translates to: TVALRLDLWFPQVQK*GLIFETQDPLSLFK
Trigger: TTTGAATAATGACAGTGGGTCTTGGGTTTCAAAGATGAGACCCAATTTCTGCACTTGAGGAAACCACAGGTCTAATCGGAGGGCAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644996.1
CDS TCA 72 bp AACCTCTTATTCCATTTGTGGCTAGTAGACATCTTGTaGCCACTTAGGGGAAACTGCCTGAGAAAGAAGCCA +
Preference number: 6 (lower is better)
Translates to: NLLFHLWLVDIL*PLRGNCLRKKP
Trigger: TGGCTTCTTTCTCAGGCAGTTTCCCCTAAGTGGTCACAAGATGTCTACTAGCCACAAATGGAATAAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS GCA 72 bp TGCGCGGACTATTCAAAGAATGCAATGTGTTGCCGCTaGAGACATTATCAGAAAAGTCAGCATCCACAAACT +
Preference number: 6 (lower is better)
Translates to: CADYSKNAMCCR*RHYQKSQHPQT
Trigger: AGTTTGTGGATGCTGACTTTTCTGATAATGTCTGCAGCGGCAACACATTGCATTCTTTGAATAGTCCGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp ATCAGCTCCAGTTTTATGGCCCCTACCTCCTTATCCTaGTTAAACAAGCCCATGTGGCTATTTGAAACTAAG +
Preference number: 6 (lower is better)
Translates to: ISSSFMAPTSLS*LNKPMWLFETK
Trigger: CTTAGTTTCAAATAGCCACATGGGCTTGTTTAACCAGGATAAGGAGGTAGGGGCCATAAAACTGGAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358517.6
ENST00000644913.1
ENST00000644968.1
CDS CAA 72 bp CAAGCTGCGGACAATTGCCTGGGAGTACTTTTTGTATaGATCTCAAACGTGGGATATCTTGACCTCAAGTCT +
Preference number: 6 (lower is better)
Translates to: QAADNCLGVLFV*ISNVGYLDLKS
Trigger: AGACTTGAGGTCAAGATATCCCACGTTTGAGATCAATACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp TCTACTTCTTCGGACAGTTTATCAGATACAGGCTTATaGGGCATAGACAAGTTACCACTGGGAGAGTCATAC +
Preference number: 6 (lower is better)
Translates to: STSSDSLSDTGL*GIDKLPLGESY
Trigger: GTATGACTCTCCCAGTGGTAACTTGTCTATGCCTCATAAGCCTGTATCTGATAAACTGTCCGAAGAAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp AAGCTGCGGACAATTGCCTGGGAGTACTTTTTGTATTaGTCTCAAACGTGGGATATCTTGACCTCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: KLRTIAWEYFLY*SQTWDILTSSL
Trigger: AAGACTTGAGGTCAAGATATCCCACGTTTGAGATCAATACAAAAAGTACTCCCAGGCAATTGTCCGCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS CCA 72 bp TATGTATTGAAAGGCTGTGAAGAGGTTTCTGTCTCCTaGTGCACATGGACAAGGGAACCTCTTATTCCATTT +
Preference number: 6 (lower is better)
Translates to: YVLKGCEEVSVS*CTWTREPLIPF
Trigger: AAATGGAATAAGAGGTTCCCTTGTCCATGTGCACCAGGAGACAGAAACCTCTTCACAGCCTTTCAATACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1
CDS CAA 72 bp GATGAGTCCTCAAAGGAGAGCAAATCTGTTATTTGGTaGCTCCCAGACGTAAAGTGTGCTTTCAGCTTAGTA +
Preference number: 6 (lower is better)
Translates to: DESSKESKSVIW*LPDVKCAFSLV
Trigger: TACTAAGCTGAAAGCACACTTTACGTCTGGGAGCAACCAAATAACAGATTTGCTCTCCTTTGAGGACTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644996.1
CDS TCA 72 bp AGTACTTTTTGTATTGATCTCAAACGTGGGATATCTTaGCCTCAAGTCTTGCTCTGGTGGGAGACAGAAATC +
Preference number: 6 (lower is better)
Translates to: STFCIDLKRGIS*PQVLLWWETEI
Trigger: GATTTCTGTCTCCCACCAGAGCAAGACTTGAGGTCAAGATATCCCACGTTTGAGATCAATACAAAAAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp GTGGTTTCCTCAAGTGCAGAAATTGGGTCTCATCTTTaGAACCCAAGACCCACTGTCATTATTCAAAAATGT +
Preference number: 6 (lower is better)
Translates to: VVSSSAEIGSHL*NPRPTVIIQKC
Trigger: ACATTTTTGAATAATGACAGTGGGTCTTGGGTTTCAAAGATGAGACCCAATTTCTGCACTTGAGGAAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644996.1
CDS CAA 72 bp TGTGGTTTCCTCAAGTGCAGAAATTGGGTCTCATCTTaGAAACCCAAGACCCACTGTCATTATTCAAAAATG +
Preference number: 6 (lower is better)
Translates to: CGFLKCRNWVSS*KPKTHCHYSKM
Trigger: CATTTTTGAATAATGACAGTGGGTCTTGGGTTTCAAAGATGAGACCCAATTTCTGCACTTGAGGAAACCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644996.1
CDS GCA 72 bp CAAATCTGTTATTTGGTTGCTCCCAGACGTAAAGTGTaGTTTCAGCTTAGTAAAAGTAAACAAATGGGGCTT +
Preference number: 6 (lower is better)
Translates to: QICYLVAPRRKV*FQLSKSKQMGL
Trigger: AAGCCCCATTTGTTTACTTTTACTAAGCTGAAAGCACACTTTACGTCTGGGAGCAACCAAATAACAGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644996.1
CDS CAA 72 bp TGCAGACATTATCAGAAAAGTCAGCATCCACAAACTTaGAGTCAGATTTCCTTCTACGATTGTGAGATAGCT +
Preference number: 6 (lower is better)
Translates to: CRHYQKSQHPQT*SQISFYDCEIA
Trigger: AGCTATCTCACAATCGTAGAAGGAAATCTGACTCAAAGTTTGTGGATGCTGACTTTTCTGATAATGTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358517.6
ENST00000644968.1
CDS TCA 72 bp GCTATCACAGTACAAAGTGTTCTGATAAAGTACCAATaGAAATATAAACCTGGAGATGGAGAGTGGGAGATA +
Preference number: 6 (lower is better)
Translates to: AITVQSVLIKYQ*KYKPGDGEWEI
Trigger: TATCTCCCACTCTCCATCTCCAGGTTTATATTTTCATTGGTACTTTATCAGAACACTTTGTACTGTGATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643446.1
ENST00000643692.1