Pregenerated sensors for PLEKHF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000175895Ensembl transcript IDs: ENST00000315367.4, ENST00000519516.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AATTTATCTGATATATTTGCAAAAGCCTATCCCTGTAGAAGAGTGTaGGGAGTGGGAGAAGGCAGGGGGACCTACTTTCTATGGAATATA | + |
Preference number: 1 (lower is better) Translates to: NLSDIFAKAYPCRRV*GVGEGRGTYFLWNI Trigger: TATATTCCATAGAAAGTAGGTCCCCCTGCCTTCTCCCACTCCTCACACTCTTCTACAGGGATAGGCTTTTGCAAATATATCAGATAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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3UTR-3UTR TCA 90 bp | GTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTTCAGATAGCCACACCTaGTTAAATACTCCCAAATGT | + |
Preference number: 2 (lower is better) Translates to: VSQANSWLEQNRERAQNLSDSHT*LNTPKC Trigger: ACATTTGGGAGTATTTAATCAGGTGTGGCTATCTGA...AAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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3UTR-3UTR TCA 90 bp | TCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATCAGATAGCCACACCTaGTTAAATACTCCCAAATGT | + |
Preference number: 2 (lower is better) Translates to: SQANSWLEQNRERAQNLTSDSHT*LNTPKC Trigger: ACATTTGGGAGTATTTAATCAGGTGTGGCTATCTGA...TGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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3UTR CAA 90 bp | TCAATAAAGGTTGACAATGTAAATGTTATCTCACAACATTTCCCCTaGGTTCCTGAATTTGCTAGATTCCTATGTACCAGCAAATCTCCA | + |
Preference number: 2 (lower is better) Translates to: SIKVDNVNVISQHFP*VPEFARFLCTSKSP Trigger: TGGAGATTTGCTGGTACATAGGAATCTAGCAAATTCAGGAACCAAGGGGAAATGTTGTGAGATAACATTTACATTGTCAACCTTTATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR TCA 90 bp | ATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTTGCAGCCGCTCGCAGGTaGCTCCCCCGCCCCTCCAGT | + |
Preference number: 4 (lower is better) Translates to: MARTKQRESSESYISPKVAAARR*LPRPSS Trigger: ACTGGAGGGGCGGGGGAGTCACCTGCGAGCGGCTGC...AACTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR CCA 90 bp | TCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGAAGGTCCGATCCTCCTaGTCGCGGACGCAGGGCGCG | + |
Preference number: 4 (lower is better) Translates to: SWLEQNRERAQNLTFPPKKVRSS*SRTQGA Trigger: CGCGCCCTGCGTCCGCGACCAGGAGGATCGGACCTT...CTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR GCA 90 bp | GCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTTGATGCCTTCCAGGGTGTGTaGTGTCCGCAGCCCCGCGCA | + |
Preference number: 4 (lower is better) Translates to: ARTKQRESSESYISPKVDAFQGV*CPQPRA Trigger: TGCGCGGGGCTGCGGACAGCACACACCCTGGAAGGC...ATCAACTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR CCA 90 bp | ATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTTTCACAGACCCCAACATaGCGTCGGCCGCCACCGCCC | + |
Preference number: 4 (lower is better) Translates to: MARTKQRESSESYISPKVSQTPT*RRPPPP Trigger: GGGCGGTGGCGGCCGACGCCATGTTGGGGTCTGTGA...AACTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | TCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTCTGATCTAGCAGGCTaGCATGTGGCCATGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: SWLEQNRERAQNLTFPPKSDLAG*HVAMSP Trigger: TGGGGACATGGCCACATGCCAGCCTGCTAGATCAGA...CTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | ATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTTTCTGATCTAGCAGGCTaGCATGTGGCCATGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: MARTKQRESSESYISPKVSDLAG*HVAMSP Trigger: TGGGGACATGGCCACATGCCAGCCTGCTAGATCAGA...AACTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR TCA 90 bp | GTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTCTGGCTGTAAGAGTCTaGTCTAGCAGGCTGGCATGT | + |
Preference number: 4 (lower is better) Translates to: VSQANSWLEQNRERAQNLLAVRV*SSRLAC Trigger: ACATGCCAGCCTGCTAGATCAGACTCTTACAGCCAG...AAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | TTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAACATTTGCGGCAATGGTaGCGACGATTAACAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: FMARTKQRESSESYISPKHLRQW*RRLTGV Trigger: CACACCTGTTAATCGTCGCCACCATTGCCGCAAATG...TTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | GCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCATTTGCGGCAATGGTaGCGACGATTAACAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: ANSWLEQNRERAQNLTFPHLRQW*RRLTGV Trigger: CACACCTGTTAATCGTCGCCACCATTGCCGCAAATG...GGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | AAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCCCACATTTGCGGCAATaGTGGCGACGATTAACAGGT | + |
Preference number: 4 (lower is better) Translates to: KFMARTKQRESSESYISPPHLRQ*WRRLTG Trigger: ACCTGTTAATCGTCGCCACCATTGCCGCAAATGTGG...GGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | AATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCACCACATTTGCGGCAATaGTGGCGACGATTAACAGGT | + |
Preference number: 4 (lower is better) Translates to: NSWLEQNRERAQNLTFPPPHLRQ*WRRLTG Trigger: ACCTGTTAATCGTCGCCACCATTGCCGCAAATGTGG...TGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | TCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGACAGGCTTAGAGGACTaGCTGGGAAGAAGAAATCTC | + |
Preference number: 4 (lower is better) Translates to: SWLEQNRERAQNLTFPPKTGLED*LGRRNL Trigger: GAGATTTCTTCTTCCCAGCCAGTCCTCTAAGCCTGT...CTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | GTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACGCATACATACAGTTaGCTCAGAGTCAGGAACCCA | + |
Preference number: 4 (lower is better) Translates to: VSQANSWLEQNRERAQNLTHTYS*LRVRNP Trigger: TGGGTTCCTGACTCTGAGGCAACTGTATGTATGCGT...AAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | GTTACAAGTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCACAACAAAACCACATTTaGGGCAATGGTGGCGACGAT | + |
Preference number: 4 (lower is better) Translates to: VTSFSGKFMARTKQRESSQQNHI*GNGGDD Trigger: ATCGTCGCCACCATTGCCGCAAATGTGGTTTTGTTG...TGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAACTTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | GCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCAACAAAACCACATTTaGGGCAATGGTGGCGACGAT | + |
Preference number: 4 (lower is better) Translates to: ANSWLEQNRERAQNLTFPQQNHI*GNGGDD Trigger: ATCGTCGCCACCATTGCCGCAAATGTGGTTTTGTTG...GGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | GCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCACAGGCTTAGAGGACTaGCTGGGAAGAAGAAATCTC | + |
Preference number: 4 (lower is better) Translates to: ANSWLEQNRERAQNLTFPTGLED*LGRRNL Trigger: GAGATTTCTTCTTCCCAGCCAGTCCTCTAAGCCTGT...GGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR TCA 90 bp | AAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCATGATTCATCCATTCTaGTTTCTCCGTAGCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: KFMARTKQRESSESYISPMIHPF*FLRSSG Trigger: GCCACTGCTACGGAGAAATCAGAATGGATGAATCAT...GGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR TCA 90 bp | GTTACAAGTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAATGATTCATCCATTCTaGTTTCTCCGTAGCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: VTSFSGKFMARTKQRESSMIHPF*FLRSSG Trigger: GCCACTGCTACGGAGAAATCAGAATGGATGAATCAT...TGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAACTTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | TTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAACAGCATGTTCATTACTaGGTGTCTTCCCACTTTTGG | + |
Preference number: 4 (lower is better) Translates to: FMARTKQRESSESYISPKQHVHY*VSSHFW Trigger: CCAAAAGTGGGAAGACACCCAGTAATGAACATGCTG...TTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | AATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCACAGCATGTTCATTACTaGGTGTCTTCCCACTTTTGG | + |
Preference number: 4 (lower is better) Translates to: NSWLEQNRERAQNLTFPPQHVHY*VSSHFW Trigger: CCAAAAGTGGGAAGACACCCAGTAATGAACATGCTG...TGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR TCA 90 bp | CAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTGGTATAGTTAAAGGTTaGCCAGCTGCTCCAAAACAG | + |
Preference number: 4 (lower is better) Translates to: QANSWLEQNRERAQNLTFGIVKG*PAAPKQ Trigger: CTGTTTTGGAGCAGCTGGTCAACCTTTAACTATACC...AAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | TTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTGCTTCACTGTTTaGCAAGCGATCCACCATCTT | + |
Preference number: 4 (lower is better) Translates to: FSGKFMARTKQRESSESYICFTV*QAIHHL Trigger: AAGATGGTGGATCGCTTGGCAAACAGTGAAGCAAAT...GTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR TCA 90 bp | GTTACAAGTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCATCAGATAGCCACACCTaGTTAAATACTCCCAAATGT | + |
Preference number: 4 (lower is better) Translates to: VTSFSGKFMARTKQRESSSDSHT*LNTPKC Trigger: ACATTTGGGAGTATTTAATCAGGTGTGGCTATCTGA...TGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAACTTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | TTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAATATACGTCTAGTATTTaGTTCACTGTTTGCCAAGCG | + |
Preference number: 4 (lower is better) Translates to: FMARTKQRESSESYISPKYTSSI*FTVCQA Trigger: CGCTTGGCAAACAGTGAAGCAAATACTAGACGTATA...TTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | AAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCTATACGTCTAGTATTTaGTTCACTGTTTGCCAAGCG | + |
Preference number: 4 (lower is better) Translates to: KFMARTKQRESSESYISPYTSSI*FTVCQA Trigger: CGCTTGGCAAACAGTGAAGCAAATACTAGACGTATA...GGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | AATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCATGTGTCCTTAGTCACTaGTATCATCATCGTCATCAT | + |
Preference number: 4 (lower is better) Translates to: NSWLEQNRERAQNLTFPPCVLSH*YHHRHH Trigger: ATGATGACGATGATGATAGCAGTGACTAAGGACACA...TGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR GCA 90 bp | AATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAACTTAAAGTGGTCTaGCTTGAGGCCATTCTTACA | + |
Preference number: 4 (lower is better) Translates to: NSWLEQNRERAQNLTFPPKLKVV*LEAILT Trigger: TGTAAGAATGGCCTCAAGGCAGACCACTTTAAGTTT...TGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR CCA 90 bp | TTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAATCTCAGGCAAATTCATaGCTAGAACAAAACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: FMARTKQRESSESYISPKSQANS*LEQNRE Trigger: CTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGA...TTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CCA 90 bp | ATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTTTCTCAGGCAAATTCATaGCTAGAACAAAACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: MARTKQRESSESYISPKVSQANS*LEQNRE Trigger: CTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGA...AACTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR TCA 90 bp | AAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCCAACAACGTAGTACATaGCCTGTTAAAACAAACATC | + |
Preference number: 4 (lower is better) Translates to: KFMARTKQRESSESYISPQQRST*PVKTNI Trigger: GATGTTTGTTTTAACAGGTCATGTACTACGTTGTTG...GGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR TCA 90 bp | GCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTTGATGAATCAAACTTCTCATaGCATTTGCGGTATATTCAG | + |
Preference number: 4 (lower is better) Translates to: ARTKQRESSESYISPKVDESNFS*HLRYIQ Trigger: CTGAATATACCGCAAATGTCATGAGAAGTTTGATTC...ATCAACTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR TCA 90 bp | TTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAATCCATCACAAGTTACTaGATCAAACTTCTCATGACA | + |
Preference number: 4 (lower is better) Translates to: FMARTKQRESSESYISPKSITSY*IKLLMT Trigger: TGTCATGAGAAGTTTGATTCAGTAACTTGTGATGGA...TTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR GCA 90 bp | AATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAACAGGTGTGAATTTTaGTTTCTGACAACGCATACA | + |
Preference number: 4 (lower is better) Translates to: NSWLEQNRERAQNLTFPPNRCEF*FLTTHT Trigger: TGTATGCGTTGTCAGAAAGCAAAATTCACACCTGTT...TGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS CCA 90 bp | GTGTGCTGTCCGCAGCCCCGCGCAGCCGGCGCGATCCAGACGCGGTaGGCGGGCTGGCCGCCAGCGCAGCCGCTCGCAGGTGACTCCCCC | + |
Preference number: 5 (lower is better) Translates to: VCCPQPRAAGAIQTR*AGWPPAQPLAGDSP Trigger: GGGGGAGTCACCTGCGAGCGGCTGCGCTGGCGGCCAGCCCGCCCACCGCGTCTGGATCGCGCCGGCTGCGCGGGGCTGCGGACAGCACAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS GCA 90 bp | GGCGAAGGTCCGATCCTCCTGGTCGCGGACGCAGGGCGCGGACTCTaGCCGTTCCCCGCCGGGGCCTTCCAGGGTGTGTGCTGTCCGCAG | + |
Preference number: 5 (lower is better) Translates to: GEGPILLVADAGRGL*PFPAGAFQGVCCPQ Trigger: CTGCGGACAGCACACACCCTGGAAGGCCCCGGCGGGGAACGGGCAGAGTCCGCGCCCTGCGTCCGCGACCAGGAGGATCGGACCTTCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS GCA 90 bp | ACAGTTTTCCACTATACTTATACGTCTAGTATTTGCTTCACTGTTTaGCAAGCGATCCACCATCTTTCACTAATAGCCCGGCGGCCCCCG | + |
Preference number: 5 (lower is better) Translates to: TVFHYTYTSSICFTV*QAIHHLSLIARRPP Trigger: CGGGGGCCGCCGGGCTATTAGTGAAAGATGGTGGATCGCTTGGCAAACAGTGAAGCAAATACTAGACGTATAAGTATAGTGGAAAACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000519516.1 |
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CDS GCA 90 bp | ACAGTTTTCCACTATACTTATACGTCTAGTATTTGCTTCACTGTTTaGCAAGCGATCCACCATCTTTCACTAATAGCCCCGACGGCCGCG | + |
Preference number: 5 (lower is better) Translates to: TVFHYTYTSSICFTV*QAIHHLSLIAPTAA Trigger: CGCGGCCGTCGGGGCTATTAGTGAAAGATGGTGGATCGCTTGGCAAACAGTGAAGCAAATACTAGACGTATAAGTATAGTGGAAAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS GCA 90 bp | ACCACATTTGCGGCAATGGTGGCGACGATTAACAGGTGTGAATTTTaGTTTCTGACAACGCATACATACAGTTGCCTCAGAGTCAGGAAC | + |
Preference number: 5 (lower is better) Translates to: TTFAAMVATINRCEF*FLTTHTYSCLRVRN Trigger: GTTCCTGACTCTGAGGCAACTGTATGTATGCGTTGTCAGAAAGCAAAATTCACACCTGTTAATCGTCGCCACCATTGCCGCAAATGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | TTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAAACGCATACATACAGTaGCCTCAGAGTCAGGAACCC | + |
Preference number: 5 (lower is better) Translates to: FMARTKQRESSESYISPKNAYIQ*PQSQEP Trigger: GGGTTCCTGACTCTGAGGCAACTGTATGTATGCGTT...TTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | GTTACAAGTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAAACGCATACATACAGTaGCCTCAGAGTCAGGAACCC | + |
Preference number: 5 (lower is better) Translates to: VTSFSGKFMARTKQRESSNAYIQ*PQSQEP Trigger: GGGTTCCTGACTCTGAGGCAACTGTATGTATGCGTT...TGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAACTTGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | GTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACAACAAAACCACATTaGCGGCAATGGTGGCGACGA | + |
Preference number: 5 (lower is better) Translates to: VSQANSWLEQNRERAQNLTTKPH*RQWWRR Trigger: TCGTCGCCACCATTGCCGCAAATGTGGTTTTGTTGT...AAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | GCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCACAACAAAACCACATTaGCGGCAATGGTGGCGACGA | + |
Preference number: 5 (lower is better) Translates to: ANSWLEQNRERAQNLTFPTTKPH*RQWWRR Trigger: TCGTCGCCACCATTGCCGCAAATGTGGTTTTGTTGT...GGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | TTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAATATTTGCTTCACTGTTaGCCAAGCGATCCACCATCT | + |
Preference number: 5 (lower is better) Translates to: FMARTKQRESSESYISPKYLLHC*PSDPPS Trigger: AGATGGTGGATCGCTTGGCAAACAGTGAAGCAAATA...TTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | GTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTAAAAACTGCCTTGCTTaGGGCTTTTTCCTGCACAAC | + |
Preference number: 5 (lower is better) Translates to: VSQANSWLEQNRERAQNLKNCLA*GFFLHN Trigger: GTTGTGCAGGAAAAAGCCCAAAGCAAGGCAGTTTTT...AAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | TTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACAAAAACTGCCTTGCTTaGGGCTTTTTCCTGCACAAC | + |
Preference number: 5 (lower is better) Translates to: FSGKFMARTKQRESSESYKNCLA*GFFLHN Trigger: GTTGTGCAGGAAAAAGCCCAAAGCAAGGCAGTTTTT...GTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS GCA 90 bp | AGCTGCTCCAAAACAGTTTTCCACTATACTTATACGTCTAGTATTTaGTTCACTGTTTGCCAAGCGATCCACCATCTTTCACTAATAGCC | + |
Preference number: 5 (lower is better) Translates to: SCSKTVFHYTYTSSI*FTVCQAIHHLSLIA Trigger: GGCTATTAGTGAAAGATGGTGGATCGCTTGGCAAACAGTGAAGCAAATACTAGACGTATAAGTATAGTGGAAAACTGTTTTGGAGCAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | GCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAAGTTGATGGTGTCTTCCCACTTTaGGAGAGTAAATCAGTAACA | + |
Preference number: 5 (lower is better) Translates to: ARTKQRESSESYISPKVDGVFPL*ESKSVT Trigger: TGTTACTGATTTACTCTCCAAAAGTGGGAAGACACC...ATCAACTTTGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | AATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAGGTGTCTTCCCACTTTaGGAGAGTAAATCAGTAACA | + |
Preference number: 5 (lower is better) Translates to: NSWLEQNRERAQNLTFPPGVFPL*ESKSVT Trigger: TGTTACTGATTTACTCTCCAAAAGTGGGAAGACACC...TGGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | GTTACAAGTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCACCTTGGTTCCTGAATTaGCTAGATTCCTATGTACCA | + |
Preference number: 5 (lower is better) Translates to: VTSFSGKFMARTKQRESSPWFLN*LDSYVP Trigger: TGGTACATAGGAATCTAGCAAATTCAGGAACCAAGG...TGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAACTTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR CAA 90 bp | GTTACAAGTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCATCACAACATTTCCCCTaGGTTCCTGAATTTGCTAGA | + |
Preference number: 5 (lower is better) Translates to: VTSFSGKFMARTKQRESSSQHFP*VPEFAR Trigger: TCTAGCAAATTCAGGAACCAAGGGGAAATGTTGTGA...TGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAACTTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS-3UTR CAA 90 bp | TTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACAAGTCTCCCTCATCTTaGATGGAATCAATAGTGACA | + |
Preference number: 5 (lower is better) Translates to: FSGKFMARTKQRESSESYKSPSS*MESIVT Trigger: TGTCACTATTGATTCCATCAAAGATGAGGGAGACTT...GTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | AAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCAAGTCTCCCTCATCTTaGATGGAATCAATAGTGACA | + |
Preference number: 5 (lower is better) Translates to: KFMARTKQRESSESYISPKSPSS*MESIVT Trigger: TGTCACTATTGATTCCATCAAAGATGAGGGAGACTT...GGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | GTTTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTGATTTAGTTGGTGTCTaGATTAGCCATCCATTCCTT | + |
Preference number: 5 (lower is better) Translates to: VSQANSWLEQNRERAQNLDLVGV*ISHPFL Trigger: AAGGAATGGATGGCTAATCAAGACACCAACTAAATC...AAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | TTCTCAGGCAAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACGATTTAGTTGGTGTCTaGATTAGCCATCCATTCCTT | + |
Preference number: 5 (lower is better) Translates to: FSGKFMARTKQRESSESYDLVGV*ISHPFL Trigger: AAGGAATGGATGGCTAATCAAGACACCAACTAAATC...GTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTTGCCTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | AAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCTTAAAGTGGTCTGCCTaGAGGCCATTCTTACATATT | + |
Preference number: 5 (lower is better) Translates to: KFMARTKQRESSESYISPLKWSA*RPFLHI Trigger: AATATGTAAGAATGGCCTCAAGGCAGACCACTTTAA...GGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS TCA 90 bp | GAATCTTACATTTCCCCCAAAGTTGATTTCTCAGATAGCCACACCTaGTTAAATACTCCCAAATGTGTCCTTAGTCACTGCTATCATCAT | + |
Preference number: 5 (lower is better) Translates to: ESYISPKVDFSDSHT*LNTPKCVLSHCYHH Trigger: ATGATGATAGCAGTGACTAAGGACACATTTGGGAGTATTTAATCAGGTGTGGCTATCTGAGAAATCAACTTTGGGGGAAATGTAAGATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS-3UTR CAA 90 bp | AAATTCATGGCTAGAACAAAACAGAGAGAGAGCTCAGAATCTTACATTTCCCCCTTCCTACAGGGAGATTaGTATATCTCAGATACTTTC | + |
Preference number: 5 (lower is better) Translates to: KFMARTKQRESSESYISPFLQGD*YISDTF Trigger: GAAAGTATCTGAGATATACAAATCTCCCTGTAGGAA...GGGGGAAATGTAAGATTCTGAGCTCTCTCTCTGTTTTGTTCTAGCCATGAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS GCA 72 bp | CCGATCCTCCTGGTCGCGGACGCAGGGCGCGGACTCTaGCCGTTCCCCGCCGGGGCCTTCCAGGGTGTGTGC | + |
Preference number: 6 (lower is better) Translates to: PILLVADAGRGL*PFPAGAFQGVC Trigger: GCACACACCCTGGAAGGCCCCGGCGGGGAACGGGCAGAGTCCGCGCCCTGCGTCCGCGACCAGGAGGATCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS CCA 72 bp | GCGGCGGCGACAGCGAAGGCGAAGGTCCGATCCTCCTaGTCGCGGACGCAGGGCGCGGACTCTGCCCGTTCC | + |
Preference number: 6 (lower is better) Translates to: AAATAKAKVRSS*SRTQGADSARS Trigger: GGAACGGGCAGAGTCCGCGCCCTGCGTCCGCGACCAGGAGGATCGGACCTTCGCCTTCGCTGTCGCCGCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS CCA 72 bp | CGGCCGGGAGCGCCCCGTTTCTCACAGACCCCAACATaGCGTCGGCCGCCACCGCCCGCGACGACGACACCT | + |
Preference number: 6 (lower is better) Translates to: RPGAPRFSQTPT*RRPPPPATTTP Trigger: AGGTGTCGTCGTCGCGGGCGGTGGCGGCCGACGCCATGTTGGGGTCTGTGAGAAACGGGGCGCTCCCGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519516.1 |
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CDS CCA 72 bp | CAGGGCCCACAGACAACAAAACCACATTTGCGGCAATaGTGGCGACGATTAACAGGTGTGAATTTTGCTTTC | + |
Preference number: 6 (lower is better) Translates to: QGPQTTKPHLRQ*WRRLTGVNFAF Trigger: GAAAGCAAAATTCACACCTGTTAATCGTCGCCACCATTGCCGCAAATGTGGTTTTGTTGTCTGTGGGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS GCA 72 bp | GCGGCAATGGTGGCGACGATTAACAGGTGTGAATTTTaGTTTCTGACAACGCATACATACAGTTGCCTCAGA | + |
Preference number: 6 (lower is better) Translates to: AAMVATINRCEF*FLTTHTYSCLR Trigger: TCTGAGGCAACTGTATGTATGCGTTGTCAGAAAGCAAAATTCACACCTGTTAATCGTCGCCACCATTGCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |
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CDS GCA 72 bp | CACTATACTTATACGTCTAGTATTTGCTTCACTGTTTaGCAAGCGATCCACCATCTTTCACTAATAGCCCCG | + |
Preference number: 6 (lower is better) Translates to: HYTYTSSICFTV*QAIHHLSLIAP Trigger: CGGGGCTATTAGTGAAAGATGGTGGATCGCTTGGCAAACAGTGAAGCAAATACTAGACGTATAAGTATAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315367.4 |
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CDS GCA 72 bp | CACTATACTTATACGTCTAGTATTTGCTTCACTGTTTaGCAAGCGATCCACCATCTTTCACTAATAGCCCGG | + |
Preference number: 6 (lower is better) Translates to: HYTYTSSICFTV*QAIHHLSLIAR Trigger: CCGGGCTATTAGTGAAAGATGGTGGATCGCTTGGCAAACAGTGAAGCAAATACTAGACGTATAAGTATAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519516.1 |
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CDS TCA 72 bp | ATTTCCCCCAAAGTTGATTTCTCAGATAGCCACACCTaGTTAAATACTCCCAAATGTGTCCTTAGTCACTGC | + |
Preference number: 6 (lower is better) Translates to: ISPKVDFSDSHT*LNTPKCVLSHC Trigger: GCAGTGACTAAGGACACATTTGGGAGTATTTAATCAGGTGTGGCTATCTGAGAAATCAACTTTGGGGGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000315367.4 ENST00000519516.1 |