RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000115762

Ensembl transcript IDs: ENST00000234115.10, ENST00000403716.5, ENST00000404460.5, ENST00000409158.5, ENST00000409279.1, ENST00000409612.5, ENST00000438882.6, ENST00000439822.6, ENST00000482225.1, ENST00000487980.5, ENST00000628582.2

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCTGAGCCATCGGCCTTaGCAGGGGCCTGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTLSHRP*QGPVEP
Trigger: GGGCTCCACAGGCCCCTGGCAAGGCCGATGGCTCAG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR CCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTAGCCTCCCGAGTAGCTaGGACCACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLSLPSS*DHRRLP
Trigger: TGGCAGGCGCCTGTGGTCCCAGCTACTCGGGAGGCT...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGATCTCCTGACCTCGTaGTCCGCCCGCCTCGGTCTC +
Preference number: 2 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPDLLTS*SARLGL
Trigger: GAGACCGAGGCGGGCGGATCACGAGGTCAGGAGATC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCTGAGCCATCGGCCTTaGCAGGGGCCTGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSLSHRP*QGPVEP
Trigger: GGGCTCCACAGGCCCCTGGCAAGGCCGATGGCTCAG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTGGGACCACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLGTTGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTGGTCCC...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTAGCCTCCCGAGTAGCTaGGACCACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTSLPSS*DHRRLP
Trigger: TGGCAGGCGCCTGTGGTCCCAGCTACTCGGGAGGCT...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGATCTCCTGACCTCGTaGTCCGCCCGCCTCGGTCTC +
Preference number: 2 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSDLLTS*SARLGL
Trigger: GAGACCGAGGCGGGCGGATCACGAGGTCAGGAGATC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGGGACCACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPGTTGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTGGTCCC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTAGCCTCCCGAGTAGCTaGGACCACAGGCGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSSLPSS*DHRRLP
Trigger: TGGCAGGCGCCTGTGGTCCCAGCTACTCGGGAGGCT...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTTTCAAAGGCGGGCTGTaGCCCATCATCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLFKGGL*PIILSH
Trigger: ATGGCTCAGGATGATGGGGCACAGCCCGCCTTTGAA...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTCTTGGAATGAGCCAGTaGCCCCGGAGAGTCAACATT +
Preference number: 2 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLLGMSQ*PRRVNI
Trigger: AATGTTGACTCTCCGGGGGCACTGGCTCATTCCAAG...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTACTATCTTGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTTILAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCAAGATAGT...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTTCACCCAGGCTGAAGTaGAGTGGCACTATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLSPRLK*SGTILA
Trigger: AGCCAAGATAGTGCCACTGCACTTCAGCCTGGGTGA...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR CCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGCCTCGGGAAGTACCTaGGAGCTTACCAACCCACAA +
Preference number: 2 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPASGST*ELTNPQ
Trigger: TTGTGGGTTGGTAAGCTCCCAGGTACTTCCCGAGGC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACTTCAAAGGCGGGCTGTaGCCCATCATCCTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: DERASPAQCKPPKARNGNFKGGL*PIILSH
Trigger: ATGGCTCAGGATGATGGGGCACAGCCCGCCTTTGAA...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACACTATCTTGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DERASPAQCKPPKARNGNTILAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCAAGATAGT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTACTATCTTGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSTILAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCAAGATAGT...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCACCCAGGCTGAAGTaGAGTGGCACTATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTSPRLK*SGTILA
Trigger: AGCCAAGATAGTGCCACTGCACTTCAGCCTGGGTGA...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGCCTCGGGAAGTACCTaGGAGCTTACCAACCCACAA +
Preference number: 2 (lower is better)
Translates to: DERASPAQCKPPKARNGNASGST*ELTNPQ
Trigger: TTGTGGGTTGGTAAGCTCCCAGGTACTTCCCGAGGC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCTTGGAATGAGCCAGTaGCCCCGGAGAGTCAACATT +
Preference number: 2 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSLGMSQ*PRRVNI
Trigger: AATGTTGACTCTCCGGGGGCACTGGCTCATTCCAAG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR GCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACTCACCCAGGCTGAAGTaGAGTGGCACTATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: DERASPAQCKPPKARNGNSPRLK*SGTILA
Trigger: AGCCAAGATAGTGCCACTGCACTTCAGCCTGGGTGA...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTGGTCAGGCAGATTTCTaGAGCATGATTGTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLGQADF*SMIVQR
Trigger: CCTTTGAACAATCATGCTTCAGAAATCTGCCTGACC...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCCATACAAGAATAAAGTaGGCAGCAGCAGCAGCTAGG +
Preference number: 2 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPHTRIK*AAAAAR
Trigger: CCTAGCTGCTGCTGCTGCTCACTTTATTCTTGTATG...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCATACAAGAATAAAGTaGGCAGCAGCAGCAGCTAGG +
Preference number: 2 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSHTRIK*AAAAAR
Trigger: CCTAGCTGCTGCTGCTGCTCACTTTATTCTTGTATG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGGTCAGGCAGATTTCTaGAGCATGATTGTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: DERASPAQCKPPKARNGNGQADF*SMIVQR
Trigger: CCTTTGAACAATCATGCTTCAGAAATCTGCCTGACC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTTCAAATAAGGTATTCTaGGAGTTGCACAAGAACAGT +
Preference number: 2 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLSNKVF*ELHKNS
Trigger: ACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGA...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCTCAAATAAGGTATTCTaGGAGTTGCACAAGAACAGT +
Preference number: 2 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPSNKVF*ELHKNS
Trigger: ACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGA...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTTCAAATAAGGTATTCTaGGAGTTGCACAAGAACAGT +
Preference number: 2 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSSNKVF*ELHKNS
Trigger: ACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGA...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR TCA 90 bp GCGGCACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCTGGATTAAGAAAATGTaGCACATGAGGCCAGCGCCG +
Preference number: 2 (lower is better)
Translates to: AALFTIAKSWNQPKYPSAWIKKM*HMRPAP
Trigger: CGGCGCTGGCCTCATGTGTCACATTTTCTTAATCCA...GGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGTGCCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404460.5
3UTR-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTTGGAATGAGCCAGTaGCCCCGGAGAGTCAACATT +
Preference number: 2 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELGMSQ*PRRVNI
Trigger: AATGTTGACTCTCCGGGGGCACTGGCTCATTCCAAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
3UTR-3UTR CAA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTCCGGAGAGTCAACATTaGAACAAAATAGCACAGTTC +
Preference number: 3 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLPESQH*NKIAQF
Trigger: GAACTGTGCTATTTTGTTCAAATGTTGACTCTCCGG...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR CAA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCCGGAGAGTCAACATTaGAACAAAATAGCACAGTTC +
Preference number: 3 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTPESQH*NKIAQF
Trigger: GAACTGTGCTATTTTGTTCAAATGTTGACTCTCCGG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR CCA 72 bp GAGAAAAGCAGACCCGTGGTCATCACTAGGTGTCTCTaGTGTCTCGCTAAAGATGGAGTCCTATGTAGGTTG +
Preference number: 3 (lower is better)
Translates to: EKSRPVVITRCL*CLAKDGVLCRL
Trigger: CAACCTACATAGGACTCCATCTTTAGCGAGACACCAGAGACACCTAGTGATGACCACGGGTCTGCTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
3UTR-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACCGGAGAGTCAACATTaGAACAAAATAGCACAGTTC +
Preference number: 3 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEPESQH*NKIAQF
Trigger: GAACTGTGCTATTTTGTTCAAATGTTGACTCTCCGG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR TCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTTCCTGGCCGCCGTTCTaGCGTCACGCCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLSWPPF*RHASAR
Trigger: GCGCGCCGAGGCGTGACGTCAGAACGGCGGCCAGGA...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCAGGCGGCAGGGGGCGTaGGTCTCCCAGGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPRRQGA*VSQEVG
Trigger: GCCGACCTCCTGGGAGACCCACGCCCCCTGCCGCCT...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACTCCTGGCCGCCGTTCTaGCGTCACGCCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNSWPPF*RHASAR
Trigger: GCGCGCCGAGGCGTGACGTCAGAACGGCGGCCAGGA...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCCCTCGCCTGCTCGCCTaGAACTGCCGCACGTCCGGC +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPPRLLA*NCRTSG
Trigger: GCCGGACGTGCGGCAGTTGCAGGCGAGCAGGCGAGG...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTCTGAGCCATCGGCCTTaGCAGGGGCCTGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLLSHRP*QGPVEP
Trigger: GGGCTCCACAGGCCCCTGGCAAGGCCGATGGCTCAG...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTAGGCGGCAGGGGGCGTaGGTCTCCCAGGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSRRQGA*VSQEVG
Trigger: GCCGACCTCCTGGGAGACCCACGCCCCCTGCCGCCT...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCCTGCTCGCCTGCAACTaGCGCACGTCCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPLLACN*RTSGVL
Trigger: CAGGACGCCGGACGTGCGGCAGTTGCAGGCGAGCAG...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTCGGCGATTCCTCGCCTaGTCGCCTGCAACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLRRFLA*SPATAA
Trigger: TGCGGCAGTTGCAGGCGAGCAGGCGAGGAATCGCCG...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGGCCATGCCCGTGGCTaGTCCTGCCAGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPGHARG*SCQHAQ
Trigger: CTGGGCATGCTGGCAGGAGCAGCCACGGGCATGGCC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCTGCTCGCCTGCAACTaGCGCACGTCCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSLLACN*RTSGVL
Trigger: CAGGACGCCGGACGTGCGGCAGTTGCAGGCGAGCAG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCCGGCGATTCCTCGCCTaGTCGCCTGCAACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPRRFLA*SPATAA
Trigger: TGCGGCAGTTGCAGGCGAGCAGGCGAGGAATCGCCG...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCGGCGATTCCTCGCCTaGTCGCCTGCAACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTRRFLA*SPATAA
Trigger: TGCGGCAGTTGCAGGCGAGCAGGCGAGGAATCGCCG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGGCCATGCCCGTGGCTaGTCCTGCCAGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSGHARG*SCQHAQ
Trigger: CTGGGCATGCTGGCAGGAGCAGCCACGGGCATGGCC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTGAGACCCTAAGGCCATaGCCGTGGCTGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLETLRP*PWLLLP
Trigger: TGGCAGGAGCAGCCACGGGCATGGCCTTAGGGTCTC...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGATCTCCTGACCTCGTaGTCCGCCCGCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNDLLTS*SARLGL
Trigger: GAGACCGAGGCGGGCGGATCACGAGGTCAGGAGATC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCTGCTCCTGCCAGCATaGCCAGTGCCAGGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTLLLPA*PVPGRC
Trigger: ACAGCGACCTGGCACTGGGCATGCTGGCAGGAGCAG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTGAGACCCTAAGGCCATaGCCGTGGCTGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTETLRP*PWLLLP
Trigger: TGGCAGGAGCAGCCACGGGCATGGCCTTAGGGTCTC...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACAGCCTCCCGAGTAGCTaGGACCACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNSLPSS*DHRRLP
Trigger: TGGCAGGCGCCTGTGGTCCCAGCTACTCGGGAGGCT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCCCTGGCCAGGCTGAGTaGTACCTTGAGCCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPPGQAE*YLEPVP
Trigger: AGGGACCGGCTCAAGGTACCACTCAGCCTGGCCAGG...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTTCCGGGGGCCGCGCCTaGGACAATTTGAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLSGGRA*DNLSSN
Trigger: ATTGCTGCTCAAATTGTCCCAGGCGCGGCCCCCGGA...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTGTCTGGGTGGTTTTCTaGGAAACGGGACGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLVWVVF*ETGRKA
Trigger: CGCCTTCCGTCCCGTTTCTCAGAAAACCACCCAGAC...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTTTTCCATCCGGGGGCTaGGTATCCCGACATTCCTGC +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLFPSGG*VSRHSC
Trigger: GCAGGAATGTCGGGATACTCAGCCCCCGGATGGAAA...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCTGCTCCTGCCAGCATaGCCAGTGCCAGGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSLLLPA*PVPGRC
Trigger: ACAGCGACCTGGCACTGGGCATGCTGGCAGGAGCAG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGAGACCCTAAGGCCATaGCCGTGGCTGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSETLRP*PWLLLP
Trigger: TGGCAGGAGCAGCCACGGGCATGGCCTTAGGGTCTC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGGGACCACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSGTTGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTGGTCCC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTACCTGCGAACCAGCGTaGAGAACACCAAGACGCCAC +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLTCEPA*RTPRRH
Trigger: GTGGCGTCTTGGTGTTCTCCACGCTGGTTCGCAGGT...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACCTAAGGCCATGCCCGTaGCTGCTCCTGCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNLRPCP*LLLPAC
Trigger: GCATGCTGGCAGGAGCAGCCACGGGCATGGCCTTAG...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACCCTGGCCAGGCTGAGTaGTACCTTGAGCCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNPGQAE*YLEPVP
Trigger: AGGGACCGGCTCAAGGTACCACTCAGCCTGGCCAGG...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGCCCCGTGCGGATGTTaGTGCAGTCCATTGGCATGT +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPAPCGC*CSPLAC
Trigger: ACATGCCAATGGACTGCATCAACATCCGCACGGGGC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTTTCCATCCGGGGGCTaGGTATCCCGACATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTFPSGG*VSRHSC
Trigger: GCAGGAATGTCGGGATACTCAGCCCCCGGATGGAAA...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTCGCCATCTCTTCACCTaGGAACCAGCGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLRHLFT*EPAWRT
Trigger: TGTTCTCCACGCTGGTTCGCAGGTGAAGAGATGGCG...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTGACAACTTGAGTTCCTaGCGGGTACGCACCACCGTA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLDNLSS*RVRTTV
Trigger: TACGGTGGTGCGTACCCGCCAGGAACTCAAGTTGTC...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTAGCTACAGTCTGCCCTaGTGCTCAGTGAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLSYSLP*CSVNSH
Trigger: GTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCT...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCGCCATCTCTTCACCTaGGAACCAGCGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTRHLFT*EPAWRT
Trigger: TGTTCTCCACGCTGGTTCGCAGGTGAAGAGATGGCG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGTATCCCGACATTCCTaGCCCGTGCGGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPVSRHS*PVRMLM
Trigger: CATCAACATCCGCACGGGGCAGGAATGTCGGGATAC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCTTCAAAGGCGGGCTGTaGCCCATCATCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPFKGGL*PIILSH
Trigger: ATGGCTCAGGATGATGGGGCACAGCCCGCCTTTGAA...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTATCTTGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPTILAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCAAGATAGT...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTACAGAGTCCCACTTCTaGACAGGATGGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLTESHF*TGWAFR
Trigger: TCTGAAGGCCCATCCTGTGCAGAAGTGGGACTCTGT...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGGCGGGGTGTCTGGGTaGTTTTCTGAGAAACGGGAC +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSGGVSG*FSEKRD
Trigger: GTCCCGTTTCTCAGAAAACCACCCAGACACCCCGCC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGGCGGGGTGTCTGGGTaGTTTTCTGAGAAACGGGAC +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNGGVSG*FSEKRD
Trigger: GTCCCGTTTCTCAGAAAACCACCCAGACACCCCGCC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTACCTGCGAACCAGCGTaGAGAACACCAAGACGCCAC +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSTCEPA*RTPRRH
Trigger: GTGGCGTCTTGGTGTTCTCCACGCTGGTTCGCAGGT...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTGGACCATATGGAGTGTaGGGCAGGGACATTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTGPYGV*GRDIRC
Trigger: ACAGCGAATGTCCCTGCCCCACACTCCATATGGTCC...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGGACCATATGGAGTGTaGGGCAGGGACATTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPGPYGV*GRDIRC
Trigger: ACAGCGAATGTCCCTGCCCCACACTCCATATGGTCC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTGTACGCACCACCGTATaGCCCATAGCCATAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTVRTTV*PIAISL
Trigger: CAGGCTTATGGCTATGGGCCATACGGTGGTGCGTAC...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTGATGGTCTCTGCATATaGGTACTGGTAGGGCACGGC +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTDGLCI*VLVGHG
Trigger: GCCGTGCCCTACCAGTACCCATATGCAGAGACCATC...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403716.5
CDS-3UTR TCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGAGCATGCAGTCTTTTaGCTTTCCATCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNEHAVF*LSIRGL
Trigger: CAGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGTATCCCGACATTCCTaGCCCGTGCGGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNVSRHS*PVRMLM
Trigger: CATCAACATCCGCACGGGGCAGGAATGTCGGGATAC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCTTGGAATGAGCCAGTaGCCCCGGAGAGTCAACATT +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTLGMSQ*PRRVNI
Trigger: AATGTTGACTCTCCGGGGGCACTGGCTCATTCCAAG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCTCACCCAGGCTGAAGTaGAGTGGCACTATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPSPRLK*SGTILA
Trigger: AGCCAAGATAGTGCCACTGCACTTCAGCCTGGGTGA...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACAGAGTCCCACTTCTaGACAGGATGGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPTESHF*TGWAFR
Trigger: TCTGAAGGCCCATCCTGTGCAGAAGTGGGACTCTGT...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTACAGTCTGCCCTGGTaGTCAGTGAACAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTYSLPW*SVNSHR
Trigger: TCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTA...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGTACGCACCACCGTATaGCCCATAGCCATAAGCCTC +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNVRTTV*PIAISL
Trigger: GAGGCTTATGGCTATGGGCCATACGGTGGTGCGTAC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234115.10
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGACAACTTGAGTTCCTaGCGGGTACGCACCACCGTA +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNDNLSS*RVRTTV
Trigger: TACGGTGGTGCGTACCCGCCAGGAACTCAAGTTGTC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGACAACTTGAGTTCCTaGCGGGTACGCACCACCGTA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSDNLSS*RVRTTV
Trigger: TACGGTGGTGCGTACCCGCCAGGAACTCAAGTTGTC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGCCTCGGGAAGTACCTaGGAGCTTACCAACCCACAA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSASGST*ELTNPQ
Trigger: TTGTGGGTTGGTAAGCTCCCAGGTACTTCCCGAGGC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTCACTTCTGCACAGGATaGGCCTTCAGAGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLHFCTG*AFRVMR
Trigger: TCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACAGCTACAGTCTGCCCTaGTGCTCAGTGAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNSYSLP*CSVNSH
Trigger: GTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGTACGCACCACCGTATaGCCCATAGCCATAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSVRTTV*PIAISL
Trigger: CAGGCTTATGGCTATGGGCCATACGGTGGTGCGTAC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTTCACCCAGGCTGAAGTaGAGTGGCACTATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSSPRLK*SGTILA
Trigger: AGCCAAGATAGTGCCACTGCACTTCAGCCTGGGTGA...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACTACAGTCTGCCCTGGTaGTCAGTGAACAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNYSLPW*SVNSHR
Trigger: TCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTA...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTTACAGTCTGCCCTGGTaGTCAGTGAACAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSYSLPW*SVNSHR
Trigger: TCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTA...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCAGGCTTATCTATGGCTaGCTAATGAGACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPRLIYG*LMRLAP
Trigger: TGGGGCCAGTCTCATTAGGCAGCCATAGATAAGCCT...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTAGGCTTATCTATGGCTaGCTAATGAGACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTRLIYG*LMRLAP
Trigger: TGGGGCCAGTCTCATTAGGCAGCCATAGATAAGCCT...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCACTTCTGCACAGGATaGGCCTTCAGAGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTHFCTG*AFRVMR
Trigger: TCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTGAGTCCTATGTAGGTTaGCCTAAGTTGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTESYVG*PKLASE
Trigger: CTCTGAGGCCAACTTAGGCCAACCTACATAGGACTC...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATCCTGGCCGCCGTTCTaGCGTCACGCCTCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESWPPF*RHASAR
Trigger: GCGCGCCGAGGCGTGACGTCAGAACGGCGGCCAGGA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCTGTCCATAAAGTCCTaGATATGGGTACTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTLSIKS*IWVLVG
Trigger: CCCTACCAGTACCCATATGCAGGACTTTATGGACAG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234115.10
ENST00000439822.6
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCCTGTCCATAAAGTCCTaGATATGGGTACTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPLSIKS*IWVLVG
Trigger: CCCTACCAGTACCCATATGCAGGACTTTATGGACAG...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234115.10
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTGAGCACAGGGACATCTaGTTCAAGAGCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTEHRDI*FKSILA
Trigger: TGCCAAAATGCTCTTGAAGCAGATGTCCCTGTGCTC...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACAGGCTTATCTATGGCTaGCTAATGAGACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNRLIYG*LMRLAP
Trigger: TGGGGCCAGTCTCATTAGGCAGCCATAGATAAGCCT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAAGGCGGCAGGGGGCGTaGGTCTCCCAGGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLERRQGA*VSQEVG
Trigger: GCCGACCTCCTGGGAGACCCACGCCCCCTGCCGCCT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTATCACTAGGTGTCTCTaGTGTCTCGCTAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLITRCL*CLAKDG
Trigger: TCCATCTTTAGCGAGACACCAGAGACACCTAGTGAT...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTAGAAAAGCAGACCCGTaGTCATCACTAGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTRKADP*SSLGVS
Trigger: AGAGACACCTAGTGATGACCACGGGTCTGCTTTTCT...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCAGAAAAGCAGACCCGTaGTCATCACTAGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPRKADP*SSLGVS
Trigger: AGAGACACCTAGTGATGACCACGGGTCTGCTTTTCT...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTGGTCAGGCAGATTTCTaGAGCATGATTGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTGQADF*SMIVQR
Trigger: CCTTTGAACAATCATGCTTCAGAAATCTGCCTGACC...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTAACTCAAGCACTTCTTaGCTCACACTAAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLNSSTS*LTLSVA
Trigger: TGCTACACTTAGTGTGAGTCAAGAAGTGCTTGAGTT...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACCTCGCCTGCTCGCCTaGAACTGCCGCACGTCCGGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEPRLLA*NCRTSG
Trigger: GCCGGACGTGCGGCAGTTGCAGGCGAGCAGGCGAGG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCTTCGCTGTGCTAAACTaGCACTGTAAAAGCACACTG +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPFAVLN*HCKSTL
Trigger: CAGTGTGCTTTTACAGTGGCAGTTTAGCACAGCGAA...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTTCGCTGTGCTAAACTaGCACTGTAAAAGCACACTG +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTFAVLN*HCKSTL
Trigger: CAGTGTGCTTTTACAGTGGCAGTTTAGCACAGCGAA...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGAGCACAGGGACATCTaGTTCAAGAGCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSEHRDI*FKSILA
Trigger: TGCCAAAATGCTCTTGAAGCAGATGTCCCTGTGCTC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACAAGTCCCCTGGAAACTaGAGTGCAATGACGTGTCAT +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNKSPGN*SAMTCH
Trigger: ATGACACGTCATTGCACTGCAGTTTCCAGGGGACTT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403716.5
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCAGTCCATTGGCATGTaGACCTTATCCTCGATATTC +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTQSIGM*TLSSIF
Trigger: GAATATCGAGGATAAGGTCCACATGCCAATGGACTG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACAGAAAAGCAGACCCGTaGTCATCACTAGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNRKADP*SSLGVS
Trigger: AGAGACACCTAGTGATGACCACGGGTCTGCTTTTCT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACACGGCTGGGCACGGTaGCTCAGGCCGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEHGWAR*LRPRRV
Trigger: CACCCTCCTCGGCCTGAGCCACCGTGCCCAGCCGTG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTAACTCAAGCACTTCTTaGCTCACACTAAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTNSSTS*LTLSVA
Trigger: TGCTACACTTAGTGTGAGTCAAGAAGTGCTTGAGTT...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTGCTCGCCTGCAACTaGCGCACGTCCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELLACN*RTSGVL
Trigger: CAGGACGCCGGACGTGCGGCAGTTGCAGGCGAGCAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGCCATGCCCGTGGCTaGTCCTGCCAGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGHARG*SCQHAQ
Trigger: CTGGGCATGCTGGCAGGAGCAGCCACGGGCATGGCC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTGAGCCATCGGCCTTaGCAGGGGCCTGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELSHRP*QGPVEP
Trigger: GGGCTCCACAGGCCCCTGGCAAGGCCGATGGCTCAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCAGTCCATTGGCATGTaGACCTTATCCTCGATATTC +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSQSIGM*TLSSIF
Trigger: GAATATCGAGGATAAGGTCCACATGCCAATGGACTG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTAAAATCAATACTCTGTaGTTCCTGGAATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTKINTL*FLEFPP
Trigger: GGGTGGGAATTCCAGGAACCACAGAGTATTGATTTT...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp GCGGCACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCGCCCCGTGCGGATGTTaGTGCAGTCCATTGGCATGT +
Preference number: 4 (lower is better)
Translates to: AALFTIAKSWNQPKYPSAAPCGC*CSPLAC
Trigger: ACATGCCAATGGACTGCATCAACATCCGCACGGGGC...GGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGTGCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGATCTCCTGACCTCGTaGTCCGCCCGCCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEDLLTS*SARLGL
Trigger: GAGACCGAGGCGGGCGGATCACGAGGTCAGGAGATC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
CDS-3UTR TCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTAACTCAAGCACTTCTTaGCTCACACTAAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSNSSTS*LTLSVA
Trigger: TGCTACACTTAGTGTGAGTCAAGAAGTGCTTGAGTT...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACGGCGATTCCTCGCCTaGTCGCCTGCAACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLERRFLA*SPATAA
Trigger: TGCGGCAGTTGCAGGCGAGCAGGCGAGGAATCGCCG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp GCGGCACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCTTGGGACCTTTACTGTaGAGCTCCTCAGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AALFTIAKSWNQPKYPSALGPLL*SSSGAG
Trigger: ACCGGCCCCTGAGGAGCTGCACAGTAAAGGTCCCAA...GGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGTGCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACCGGGAAGCGGAGGTTaGAGTGAGCCGAGACTGCGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEPGSGG*SEPRLR
Trigger: GCGCAGTCTCGGCTCACTGCAACCTCCGCTTCCCGG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409612.5
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAAGCCTCCCGAGTAGCTaGGACCACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESLPSS*DHRRLP
Trigger: TGGCAGGCGCCTGTGGTCCCAGCTACTCGGGAGGCT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCCAAGTCTGTGCTACCTaGAGTGTATTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPQVCAT*SVFSGK
Trigger: TTTTCCTGAAAATACACTCCAGGTAGCACAGACTTG...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTCAAGTCTGTGCTACCTaGAGTGTATTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTQVCAT*SVFSGK
Trigger: TTTTCCTGAAAATACACTCCAGGTAGCACAGACTTG...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACAAAATCAATACTCTGTaGTTCCTGGAATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: DERASPAQCKPPKARNGNKINTL*FLEFPP
Trigger: GGGTGGGAATTCCAGGAACCACAGAGTATTGATTTT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCAAATAAGGTATTCTaGGAGTTGCACAAGAACAGT +
Preference number: 4 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTSNKVF*ELHKNS
Trigger: ACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGA...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTGCTCCTGCCAGCATaGCCAGTGCCAGGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELLLPA*PVPGRC
Trigger: ACAGCGACCTGGCACTGGGCATGCTGGCAGGAGCAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGAGACCCTAAGGCCATaGCCGTGGCTGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEETLRP*PWLLLP
Trigger: TGGCAGGAGCAGCCACGGGCATGGCCTTAGGGTCTC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGGACCACAGGCGCCTaGCACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGTTGA*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGGCGCCTGTGGTCCC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACCCAGGCAGGGGTGCTaGACTGGTGTCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEPRQGC*TGVSSE
Trigger: CTCACTGCTGACACCAGTGCAGCACCCCTGCCTGGG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATGGCCCAGGCAGGGGTaGTGCACTGGTGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEWPRQG*CTGVSS
Trigger: ACTGCTGACACCAGTGCAGCACCCCTGCCTGGGCCA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTAAGGCCATGCCCGTaGCTGCTCCTGCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELRPCP*LLLPAC
Trigger: GCATGCTGGCAGGAGCAGCCACGGGCATGGCCTTAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACCTGGCCAGGCTGAGTaGTACCTTGAGCCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEPGQAE*YLEPVP
Trigger: AGGGACCGGCTCAAGGTACCACTCAGCCTGGCCAGG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCAAGTCTGTGCTACCTaGAGTGTATTTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSQVCAT*SVFSGK
Trigger: TTTTCCTGAAAATACACTCCAGGTAGCACAGACTTG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp GGCACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCATTTTCCATCCGGGGGCTaGGTATCCCGACATTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTIHNSKKLEPTQISISHFPSGG*VSRHSC
Trigger: GCAGGAATGTCGGGATACTCAGCCCCCGGATGGAAA...ATGGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGTGTCAGCAGTGAGTaGCGTGGAGTGGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGVSSE*RGVARS
Trigger: TGACCTGGCCACTCCACGTCACTCACTGCTGACACC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACACTGGTGTCAGCAGTaGGTGACGTGGAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEHWCQQ*VTWSGQ
Trigger: CTGGCCACTCCACGTCACTCACTGCTGACACCAGTG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGCTTGCTGGAGCCCTaGGGTGCCTACATTTGGCGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGLLEP*GAYIWR
Trigger: ACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAACCACCCAGCCCACCTaGCCGAGTCTAACACCACTC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLETTQPT*PSLTPL
Trigger: GAGTGGTGTTAGACTCGGTCAGGTGGGCTGGGTGGT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGGATTCTCGTGGCTTaGTGGAGCCCTGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGILVA*WSPEVP
Trigger: AGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CCA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCTCTTCTTATACAGGATaGAAAATCCTCAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPSSYTG*KILKAT
Trigger: TGTTGCTTTGAGGATTTTCCATCCTGTATAAGAAGA...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATCCGGGGGCCGCGCCTaGGACAATTTGAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESGGRA*DNLSSN
Trigger: ATTGCTGCTCAAATTGTCCCAGGCGCGGCCCCCGGA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAATTTGGCGTTCCCAGTaGGGTCCACATGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEIWRSQ*GPHGPG
Trigger: GCCTGGGCCATGTGGACCCCACTGGGAACGCCAAAT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACATGGGGGATTCTCGTaGCTTGCTGGAGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEHGGFS*LAGALR
Trigger: CCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGTCTGGGTGGTTTTCTaGGAAACGGGACGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEVWVVF*ETGRKA
Trigger: CGCCTTCCGTCCCGTTTCTCAGAAAACCACCCAGAC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGCCCCGTGCGGATGTTaGTGCAGTCCATTGGCATGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEAPCGC*CSPLAC
Trigger: ACATGCCAATGGACTGCATCAACATCCGCACGGGGC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATTTCCATCCGGGGGCTaGGTATCCCGACATTCCTGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEFPSGG*VSRHSC
Trigger: GCAGGAATGTCGGGATACTCAGCCCCCGGATGGAAA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGAGGGTGGATCACCTaGGGTCAGGAATTCGAGACC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGGWIT*GQEFET
Trigger: GGTCTCGAATTCCTGACCTCAGGTGATCCACCCTCC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGCTGGAGCCCTGAGGTaGCTACATTTGGCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEAGALR*LHLAFP
Trigger: TGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATCATTGGGGTTCATGTaGCCCGCACTCTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESLGFM*PALCTP
Trigger: GGGGGTACAGAGTGCGGGGCACATGAACCCCAATGA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAACCTGCGAACCAGCGTaGAGAACACCAAGACGCCAC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLETCEPA*RTPRRH
Trigger: GTGGCGTCTTGGTGTTCTCCACGCTGGTTCGCAGGT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp ATTGCGGCACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAACCTGCGAACCAGCGTaGAGAACACCAAGACGCCAC +
Preference number: 4 (lower is better)
Translates to: IAALFTIAKSWNQPKYPSTCEPA*RTPRRH
Trigger: GTGGCGTCTTGGTGTTCTCCACGCTGGTTCGCAGGT...TGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGTGCCGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR CCA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTTCTTCTTATACAGGATaGAAAATCCTCAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSSSYTG*KILKAT
Trigger: TGTTGCTTTGAGGATTTTCCATCCTGTATAAGAAGA...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGAGCATGCAGTCTTTTaGCTTTCCATCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEEHAVF*LSIRGL
Trigger: CAGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp GCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCATAGACTGGATTAAGAAACGCCATCTCTTCACCTaGGAACCAGCGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: AKSWNQPKYPSAIDWIKKRHLFT*EPAWRT
Trigger: TGTTCTCCACGCTGGTTCGCAGGTGAAGAGATGGCG...TTTCTTAATCCAGTCTATGGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACGCCATCTCTTCACCTaGGAACCAGCGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLERHLFT*EPAWRT
Trigger: TGTTCTCCACGCTGGTTCGCAGGTGAAGAGATGGCG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGTATCCCGACATTCCTaGCCCGTGCGGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEVSRHS*PVRMLM
Trigger: CATCAACATCCGCACGGGGCAGGAATGTCGGGATAC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATTCAAAGGCGGGCTGTaGCCCATCATCCTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEFKGGL*PIILSH
Trigger: ATGGCTCAGGATGATGGGGCACAGCCCGCCTTTGAA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAACTATCTTGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLETILAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCAAGATAGT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGACAACTTGAGTTCCTaGCGGGTACGCACCACCGTA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEDNLSS*RVRTTV
Trigger: TACGGTGGTGCGTACCCGCCAGGAACTCAAGTTGTC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGCCTCGGGAAGTACCTaGGAGCTTACCAACCCACAA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEASGST*ELTNPQ
Trigger: TTGTGGGTTGGTAAGCTCCCAGGTACTTCCCGAGGC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGACCATATGGAGTGTaGGGCAGGGACATTCGCTGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGPYGV*GRDIRC
Trigger: ACAGCGAATGTCCCTGCCCCACACTCCATATGGTCC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGTACGCACCACCGTATaGCCCATAGCCATAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEVRTTV*PIAISL
Trigger: CAGGCTTATGGCTATGGGCCATACGGTGGTGCGTAC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAATTCTCGTGGCTTGCTaGAGCCCTGAGGTGCCTACA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEILVAC*SPEVPT
Trigger: TGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAAT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGCTCTGTCAAGGACATaGGGGATTCTCGTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEALSRT*GILVAC
Trigger: GCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACAAACACCTCCTCATTaGGGTTCATGTGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEQTPPH*GSCAPH
Trigger: GTGCGGGGCACATGAACCCCAATGAGGAGGTGTTTG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp ACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCATAGAGAGCATGCAGTCTTTTaGCTTTCCATCCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TIHNSKKLEPTQISISHREHAVF*LSIRGL
Trigger: CAGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTC...TCTATGGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR GCA 90 bp ACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCATAGAGTATCCCGACATTCCTaGCCCGTGCGGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: TIHNSKKLEPTQISISHRVSRHS*PVRMLM
Trigger: CATCAACATCCGCACGGGGCAGGAATGTCGGGATAC...TCTATGGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATCACCCAGGCTGAAGTaGAGTGGCACTATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESPRLK*SGTILA
Trigger: AGCCAAGATAGTGCCACTGCACTTCAGCCTGGGTGA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
CDS-3UTR CCA 90 bp GCGGCACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCCAGTCCATTGGCATGTaGACCTTATCCTCGATATTC +
Preference number: 4 (lower is better)
Translates to: AALFTIAKSWNQPKYPSAQSIGM*TLSSIF
Trigger: GAATATCGAGGATAAGGTCCACATGCCAATGGACTG...GGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGTGCCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGTACGCACCACCGTATaGCCCATAGCCATAAGCAAG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEVRTTV*PIAISK
Trigger: CTTGCTTATGGCTATGGGCCATACGGTGGTGCGTAC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628582.2
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACACTTCTGCACAGGATaGGCCTTCAGAGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEHFCTG*AFRVMR
Trigger: TCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGAGTCCTATGTAGGTTaGCCTAAGTTGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEESYVG*PKLASE
Trigger: CTCTGAGGCCAACTTAGGCCAACCTACATAGGACTC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACATACAAGAATAAAGTaGGCAGCAGCAGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEHTRIK*AAAAAR
Trigger: CCTAGCTGCTGCTGCTGCTCACTTTATTCTTGTATG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR GCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTGTCCATAAAGTCCTaGATATGGGTACTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELSIKS*IWVLVG
Trigger: CCCTACCAGTACCCATATGCAGGACTTTATGGACAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000234115.10
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATGGAAGCTGAGACCATaGGCCACTTTTGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEWKLRP*ATFVFC
Trigger: GCAGAAAACAAAAGTGGCCCATGGTCTCAGCTTCCA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGTCAGGCAGATTTCTaGAGCATGATTGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGQADF*SMIVQR
Trigger: CCTTTGAACAATCATGCTTCAGAAATCTGCCTGACC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATTATTATCTGGAAGCTaGGACCATGGGCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELLSGS*DHGPLL
Trigger: CAAAAGTGGCCCATGGTCTCAGCTTCCAGATAATAA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACAGTCCATTGGCATGTaGACCTTATCCTCGATATTC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEQSIGM*TLSSIF
Trigger: GAATATCGAGGATAAGGTCCACATGCCAATGGACTG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAATCACTAGGTGTCTCTaGTGTCTCGCTAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEITRCL*CLAKDG
Trigger: TCCATCTTTAGCGAGACACCAGAGACACCTAGTGAT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGTCATGGGGTTACTGTaGCAATTAAAGGAGGTATGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEVMGLL*QLKEVC
Trigger: ACATACCTCCTTTAATTGTCACAGTAACCCCATGAC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409612.5
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATCAATAGTTATTATCTaGAAGCTGAGACCATGGGCC +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESIVII*KLRPWA
Trigger: GGCCCATGGTCTCAGCTTCCAGATAATAACTATTGA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR TCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATCAAATAAGGTATTCTaGGAGTTGCACAAGAACAGT +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESNKVF*ELHKNS
Trigger: ACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CCA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATCTTCTTATACAGGATaGAAAATCCTCAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: NRYAQIRYSESCTRTVLESSYTG*KILKAT
Trigger: TGTTGCTTTGAGGATTTTCCATCCTGTATAAGAAGA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS GCA 90 bp GAACACCAAGACGCCACGGCGATTCCTCGCCTGCTCGCCTGCAACTaGCGCACGTCCGGCGTCCTGGCCGCCGTTCTGACGTCACGCCTC +
Preference number: 5 (lower is better)
Translates to: EHQDATAIPRLLACN*RTSGVLAAVLTSRL
Trigger: GAGGCGTGACGTCAGAACGGCGGCCAGGACGCCGGACGTGCGGCAGTTGCAGGCGAGCAGGCGAGGAATCGCCGTGGCGTCTTGGTGTTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS GCA 90 bp TGTCAAGGACATGGGGGATTCTCGTGGCTTGCTGGAGCCCTGAGGTaGCTACATTTGGCGTTCCCAGTGGGGTCCACATGGCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CQGHGGFSWLAGALR*LHLAFPVGSTWPRQ
Trigger: CTGCCTGGGCCATGTGGACCCCACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS TCA 90 bp AGCTCTGTCAAGGACATGGGGGATTCTCGTGGCTTGCTGGAGCCCTaGGGTGCCTACATTTGGCGTTCCCAGTGGGGTCCACATGGCCCA +
Preference number: 5 (lower is better)
Translates to: SSVKDMGDSRGLLEP*GAYIWRSQWGPHGP
Trigger: TGGGCCATGTGGACCCCACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CAA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCAGGCTGAGTGGTACCTaGAGCCGGTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPRLSGT*SRSLCP
Trigger: AGGACACAGGGACCGGCTCAAGGTACCACTCAGCCT...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGTAGGTTGGCCTAAGTaGGCCTCAGAGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPVGWPK*ASEGGG
Trigger: GCCACCTCCCTCTGAGGCCAACTTAGGCCAACCTAC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS CCA 90 bp CAGGATTTAGCTCTGTCAAGGACATGGGGGATTCTCGTGGCTTGCTaGAGCCCTGAGGTGCCTACATTTGGCGTTCCCAGTGGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: QDLALSRTWGILVAC*SPEVPTFGVPSGVH
Trigger: GTGGACCCCACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGCTAAATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CAA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTGGAGCATGCAGTCTTTaGACTTTCCATCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLGACSL*TFHPGA
Trigger: AGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTCC...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTAGGCTGAGTGGTACCTaGAGCCGGTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSRLSGT*SRSLCP
Trigger: AGGACACAGGGACCGGCTCAAGGTACCACTCAGCCT...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGTAGGTTGGCCTAAGTaGGCCTCAGAGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSVGWPK*ASEGGG
Trigger: GCCACCTCCCTCTGAGGCCAACTTAGGCCAACCTAC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS GCA 90 bp ACACAGGATTTAGCTCTGTCAAGGACATGGGGGATTCTCGTGGCTTaGTGGAGCCCTGAGGTGCCTACATTTGGCGTTCCCAGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TQDLALSRTWGILVA*WSPEVPTFGVPSGV
Trigger: GACCCCACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGCTAAATCCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CAA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGGAGCATGCAGTCTTTaGACTTTCCATCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPGACSL*TFHPGA
Trigger: AGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTCC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACGGAGCATGCAGTCTTTaGACTTTCCATCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: DERASPAQCKPPKARNGNGACSL*TFHPGA
Trigger: AGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTCC...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS CCA 90 bp CATAAAGCAGCCCCAGGGACACAGGATTTAGCTCTGTCAAGGACATaGGGGATTCTCGTGGCTTGCTGGAGCCCTGAGGTGCCTACATTT +
Preference number: 5 (lower is better)
Translates to: HKAAPGTQDLALSRT*GILVACWSPEVPTF
Trigger: AAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGCTAAATCCTGTGTCCCTGGGGCTGCTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CAA 90 bp CCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTCTGCACAGGATGGGCCTTGTTAGCACCCTAATCTaGGTTTCTAAATACCGCTCT +
Preference number: 5 (lower is better)
Translates to: PWCSVNSHRVPLLHRMGLVSTLI*VSKYRS
Trigger: AGAGCGGTATTTAGAAACCAAGATTAGGGTGCTAAC...AAGGCCCATCCTGTGCAGAAGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCTACACTTGGGTCATTTaGTCTCAACTGCAGGACCTT +
Preference number: 5 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPYTWVI*SQLQDL
Trigger: AAGGTCCTGCAGTTGAGACAAAATGACCCAAGTGTA...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp TCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCACTTACACTTGGGTCATTTaGTCTCAACTGCAGGACCTT +
Preference number: 5 (lower is better)
Translates to: SAQLQSALVLSEQPQSPTYTWVI*SQLQDL
Trigger: AAGGTCCTGCAGTTGAGACAAAATGACCCAAGTGTA...AGTGGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCGTTAGCACCCTAATCTaGGTTTCTAAATACCGCTCT +
Preference number: 5 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPVSTLI*VSKYRS
Trigger: AGAGCGGTATTTAGAAACCAAGATTAGGGTGCTAAC...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTGTTAGCACCCTAATCTaGGTTTCTAAATACCGCTCT +
Preference number: 5 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSVSTLI*VSKYRS
Trigger: AGAGCGGTATTTAGAAACCAAGATTAGGGTGCTAAC...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTCCGGAGAGTCAACATTaGAACAAAATAGCACAGTTC +
Preference number: 5 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSPESQH*NKIAQF
Trigger: GAACTGTGCTATTTTGTTCAAATGTTGACTCTCCGG...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAAGGCAGGGGACTCCCTaGAACCCGGGAAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLERQGTP*NPGSGG
Trigger: ACCTCCGCTTCCCGGGTTCAAGGGAGTCCCCTGCCT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409612.5
CDS-3UTR CAA 90 bp AAGTCTGCTCAGCTACAGTCTGCCCTGGTGCTCAGTGAACAGCCACAGAGTCCCAAAGACTCACACATTTaGGGGTTCCAAATTCAATGT +
Preference number: 5 (lower is better)
Translates to: KSAQLQSALVLSEQPQSPKDSHI*GFQIQC
Trigger: ACATTGAATTTGGAACCCCAAAATGTGTGAGTCTTT...GGGACTCTGTGGCTGTTCACTGAGCACCAGGGCAGACTGTAGCTGAGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAAGGCTGAGTGGTACCTaGAGCCGGTCCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLERLSGT*SRSLCP
Trigger: AGGACACAGGGACCGGCTCAAGGTACCACTCAGCCT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp GATGAGAGAGCATCTCCCGCACAGTGCAAACCCCCAAAGGCCAGAAATGGGAACAAAGACTCACACATTTaGGGGTTCCAAATTCAATGT +
Preference number: 5 (lower is better)
Translates to: DERASPAQCKPPKARNGNKDSHI*GFQIQC
Trigger: ACATTGAATTTGGAACCCCAAAATGTGTGAGTCTTT...GTTCCCATTTCTGGCCTTTGGGGGTTTGCACTGTGCGGGAGATGCTCTCTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp CACTTCTGCACAGGATGGGCCTTCAGAGTGATGAGAGAGCATCTCCCGCACAGTAAAGACTCACACATTTaGGGGTTCCAAATTCAATGT +
Preference number: 5 (lower is better)
Translates to: HFCTGWAFRVMREHLPHSKDSHI*GFQIQC
Trigger: ACATTGAATTTGGAACCCCAAAATGTGTGAGTCTTT...ACTGTGCGGGAGATGCTCTCTCATCACTCTGAAGGCCCATCCTGTGCAGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGTAGGTTGGCCTAAGTaGGCCTCAGAGGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEVGWPK*ASEGGG
Trigger: GCCACCTCCCTCTGAGGCCAACTTAGGCCAACCTAC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTGAGGTGCCTACATTaGGCGTTCCCAGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELRCLH*AFPVGS
Trigger: GGACCCCACTGGGAACGCCAAATGTAGGCACCTCAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAATGCCCCGTGCGGATGTaGATGCAGTCCATTGGCATG +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLECPVRM*MQSIGM
Trigger: CATGCCAATGGACTGCATCAACATCCGCACGGGGCA...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGGAGCATGCAGTCTTTaGACTTTCCATCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEGACSL*TFHPGA
Trigger: AGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTCC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000438882.6
ENST00000439822.6
ENST00000628582.2
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAACAAACACCTCCTCATaGGGGTTCATGTGCCCCGCA +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLETNTSS*GFMCPA
Trigger: TGCGGGGCACATGAACCCCAATGAGGAGGTGTTTGT...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS GCA 90 bp GAATCTAATAATGAAAGACAGCATGATGAGACTGCTATTCCTTTCTaGCATTTTCACCACAATGGGATCGGCCTAGGCAGTCTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: ESNNERQHDETAIPF*HFHHNGIGLGSLRE
Trigger: CTCTCTCAGACTGCCTAGGCCGATCCCATTGTGGTGAAAATGGCAGAAAGGAATAGCAGTCTCATCATGCTGTCTTTCATTATTAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482225.1
CDS-3UTR CAA 90 bp ACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCATAGAGGAGCATGCAGTCTTTaGACTTTCCATCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: TIHNSKKLEPTQISISHRGACSL*TFHPGA
Trigger: AGCCCCCGGATGGAAAGTCAAAAGACTGCATGCTCC...TCTATGGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS CCA 90 bp TATGAAAAAGGAAGAAAACTCATCTCTGTTCTTCAAGGGCAACAGTaGAGAGTCAAAGAGATGTCACAGGTACATTCTGCGAACCAGCGT +
Preference number: 5 (lower is better)
Translates to: YEKGRKLISVLQGQQ*RVKEMSQVHSANQR
Trigger: ACGCTGGTTCGCAGAATGTACCTGTGACATCTCTTTGACTCTCCACTGTTGCCCTTGAAGAACAGAGATGAGTTTTCTTCCTTTTTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487980.5
CDS-3UTR CAA 90 bp GCGGCACTATTCACAATAGCAAAAAGTTGGAACCAACCCAAATATCCATCAGCCCACAATAGCAAAAAGTaGGAACCAACCCAAATATCC +
Preference number: 5 (lower is better)
Translates to: AALFTIAKSWNQPKYPSAHNSKK*EPTQIS
Trigger: GGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTG...GGCTGATGGATATTTGGGTTGGTTCCAACTTTTTGCTATTGTGAATAGTGCCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000404460.5
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAACTAAAAATACAAAAATaGGCCGGGCGCAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLELKIQK*AGRSSS
Trigger: TGAGCTGCTGCGCCCGGCCAATTTTTGTATTTTTAG...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGTTAGCACCCTAATCTaGGTTTCTAAATACCGCTCT +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEVSTLI*VSKYRS
Trigger: AGAGCGGTATTTAGAAACCAAGATTAGGGTGCTAAC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS-3UTR CAA 90 bp AACAGGTATGCTCAAATAAGGTATTCTGAGAGTTGCACAAGAACAGTCTTGGAAGACCATGGGCCACTTTaGTTTTCTGCTTTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: NRYAQIRYSESCTRTVLEDHGPL*FSALAF
Trigger: AAAAGCTAAAGCAGAAAACAAAAGTGGCCCATGGTC...TTCCAAGACTGTTCTTGTGCAACTCTCAGAATACCTTATTTGAGCATACCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS GCA 72 bp GTGGAGAACACCAAGACGCCACGGCGATTCCTCGCCTaGTCGCCTGCAACTGCCGCACGTCCGGCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VENTKTPRRFLA*SPATAARPASW
Trigger: CCAGGACGCCGGACGTGCGGCAGTTGCAGGCGAGCAGGCGAGGAATCGCCGTGGCGTCTTGGTGTTCTCCAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
ENST00000628582.2
CDS CAA 72 bp TTCTCGTGGCTTGCTGGAGCCCTGAGGTGCCTACATTaGGCGTTCCCAGTGGGGTCCACATGGCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: FSWLAGALRCLH*AFPVGSTWPRQ
Trigger: CTGCCTGGGCCATGTGGACCCCACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS GCA 72 bp CATGGGGGATTCTCGTGGCTTGCTGGAGCCCTGAGGTaGCTACATTTGGCGTTCCCAGTGGGGTCCACATGG +
Preference number: 6 (lower is better)
Translates to: HGGFSWLAGALR*LHLAFPVGSTW
Trigger: CCATGTGGACCCCACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS TCA 72 bp AAGGACATGGGGGATTCTCGTGGCTTGCTGGAGCCCTaGGGTGCCTACATTTGGCGTTCCCAGTGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: KDMGDSRGLLEP*GAYIWRSQWGP
Trigger: TGGACCCCACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS CCA 72 bp CGCCTGCCCATTCGCAGCGTAGACAACTTGAGTTCCTaGCGGGTACGCACCACCGTATGGCCCATAGCCATA +
Preference number: 6 (lower is better)
Translates to: RLPIRSVDNLSS*RVRTTVWPIAI
Trigger: TATGGCTATGGGCCATACGGTGGTGCGTACCCGCCAGGAACTCAAGTTGTCTACGCTGCGAATGGGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000234115.10
ENST00000403716.5
ENST00000409158.5
ENST00000409279.1
ENST00000409612.5
ENST00000439822.6
ENST00000628582.2
CDS CCA 72 bp GCCCCAGGGACACAGGATTTAGCTCTGTCAAGGACATaGGGGATTCTCGTGGCTTGCTGGAGCCCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: APGTQDLALSRT*GILVACWSPEV
Trigger: CACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGCTAAATCCTGTGTCCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS CCA 72 bp GCTCTGTCAAGGACATGGGGGATTCTCGTGGCTTGCTaGAGCCCTGAGGTGCCTACATTTGGCGTTCCCAGT +
Preference number: 6 (lower is better)
Translates to: ALSRTWGILVAC*SPEVPTFGVPS
Trigger: ACTGGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS GCA 72 bp TTAGCTCTGTCAAGGACATGGGGGATTCTCGTGGCTTaGTGGAGCCCTGAGGTGCCTACATTTGGCGTTCCC +
Preference number: 6 (lower is better)
Translates to: LALSRTWGILVA*WSPEVPTFGVP
Trigger: GGGAACGCCAAATGTAGGCACCTCAGGGCTCCAGCAAGCCACGAGAATCCCCCATGTCCTTGACAGAGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409279.1
CDS CCA 72 bp CAGGGATCTACCCAGAGAGCTTCCGGGGGCCGCGCCTaGGACAATTTGAGCAGCAATATAAAGTACATTGCA +
Preference number: 6 (lower is better)
Translates to: QGSTQRASGGRA*DNLSSNIKYIA
Trigger: TGCAATGTACTTTATATTGCTGCTCAAATTGTCCCAGGCGCGGCCCCCGGAAGCTCTCTGGGTAGATCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS TCA 72 bp AAAGTCCCCTGGAAACTGCAGTGCAATGACGTGTCATaGGGATGGTCTCTGCATATGGGTACTGGTAGGGCA +
Preference number: 6 (lower is better)
Translates to: KVPWKLQCNDVS*GWSLHMGTGRA
Trigger: TGCCCTACCAGTACCCATATGCAGAGACCATCCTCATGACACGTCATTGCACTGCAGTTTCCAGGGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403716.5
CDS CCA 72 bp ATTAAAGGAGGTATGTCCAAACAGCCCTGTAGTAGATaGTCCAAAAGTGAGAATTGGCCAGGCGCGTTGGCT +
Preference number: 6 (lower is better)
Translates to: IKGGMSKQPCSR*SKSENWPGALA
Trigger: AGCCAACGCGCCTGGCCAATTCTCACTTTTGGACCATCTACTACAGGGCTGTTTGGACATACCTCCTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409612.5
CDS CAA 72 bp ACCCAGAGAGCTTCCGGGGGCCGCGCCTGGGACAATTaGAGCAGCAATATAAAGTACATTGCATTAAGTTAT +
Preference number: 6 (lower is better)
Translates to: TQRASGGRAWDN*SSNIKYIALSY
Trigger: ATAACTTAATGCAATGTACTTTATATTGCTGCTCAAATTGTCCCAGGCGCGGCCCCCGGAAGCTCTCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403716.5
ENST00000409158.5
ENST00000439822.6
CDS GCA 72 bp AATGAAAGACAGCATGATGAGACTGCTATTCCTTTCTaGCATTTTCACCACAATGGGATCGGCCTAGGCAGT +
Preference number: 6 (lower is better)
Translates to: NERQHDETAIPF*HFHHNGIGLGS
Trigger: ACTGCCTAGGCCGATCCCATTGTGGTGAAAATGGCAGAAAGGAATAGCAGTCTCATCATGCTGTCTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482225.1
CDS TCA 72 bp TGCATTTCTCTCATACATCCACTGAGTCCCTTATTCTaGTGCCTGAAAGAAAACTCCACGCCCTTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: CISLIHPLSPLF*CLKENSTPFLF
Trigger: GAAAAGAAAGGGCGTGGAGTTTTCTTTCAGGCATCAGAATAAGGGACTCAGTGGATGTATGAGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482225.1