RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHA8 (Homo sapiens)

Ensembl gene IDs: ENSG00000106086

Ensembl transcript IDs: ENST00000258679.11, ENST00000396257.6, ENST00000396259.5, ENST00000440706.3, ENST00000449726.6, ENST00000498106.1, ENST00000622102.4, ENST00000649443.1

Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCTTGCTGGGCATCCTGGCCCAGGAGAGGCATTTAGTCCAGGCTaGTCCCCTGGAGAGAGGCGTCACCCAGATGTGATGCATCCTGTC +
Preference number: 1 (lower is better)
Translates to: GLAGHPGPGEAFSPG*SPGERRHPDVMHPV
Trigger: GACAGGATGCATCACATCTGGGTGACGCCTCTCTCCAGGGGATCAGCCTGGACTAAATGCCTCTCCTGGGCCAGGATGCCCAGCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR CCA 90 bp CCTGGAGAGAGGCGTCACCCAGATGTGATGCATCCTGTCTCATGCTaGGTCATCATGTCCTGCAGGCCACTCTGCACCCGCCTGATTCTG +
Preference number: 1 (lower is better)
Translates to: PGERRHPDVMHPVSC*VIMSCRPLCTRLIL
Trigger: CAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACGCCTCTCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR GCA 90 bp CACCCAGATGTGATGCATCCTGTCTCATGCTGGGTCATCATGTCCTaGAGGCCACTCTGCACCCGCCTGATTCTGAGTGACAGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: HPDVMHPVSCWVIMS*RPLCTRLILSDSPP
Trigger: AGGAGGGCTGTCACTCAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR CCA 90 bp GGGAAGGTACCCATGGCTTCTCTCCGATGCACACTCGAGGCAGCATaGTCTACTGAGACTAGGGCCAGGGTTGGAGCATCACACTGTGCA +
Preference number: 1 (lower is better)
Translates to: GKVPMASLRCTLEAA*STETRARVGASHCA
Trigger: TGCACAGTGTGATGCTCCAACCCTGGCCCTAGTCTCAGTAGACCATGCTGCCTCGAGTGTGCATCGGAGAGAAGCCATGGGTACCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 90 bp CATTTAGTCCAGGCTGATCCCCTGGAGAGAGGCGTCACCCAGATGTaGTGCATCCTGTCTCATGCTGGGTCATCATGTCCTGCAGGCCAC +
Preference number: 1 (lower is better)
Translates to: HLVQADPLERGVTQM*CILSHAGSSCPAGH
Trigger: GTGGCCTGCAGGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACGCCTCTCTCCAGGGGATCAGCCTGGACTAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR TCA 90 bp CCGTCTACACCCACATTCCTACACCTTCCTTCCTCTCTTGCCATGTaGTCTCTCCACACAGGCTCCCCTTCTGTCTTCCACCTTGAGTGG +
Preference number: 1 (lower is better)
Translates to: PSTPTFLHLPSSLAM*SLHTGSPSVFHLEW
Trigger: CCACTCAAGGTGGAAGACAGAAGGGGAGCCTGTGTGGAGAGATCACATGGCAAGAGAGGAAGGAAGGTGTAGGAATGTGGGTGTAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR GCA 90 bp TTGGGGCTAGGGCACACCATTAATCTTCTCAGAGCAACGGTTTCATaGCTGTCAGCAAGGATGGGACTCCTGTCCACGTCTTCTTCGCCT +
Preference number: 1 (lower is better)
Translates to: LGLGHTINLLRATVS*LSARMGLLSTSSSP
Trigger: AGGCGAAGAAGACGTGGACAGGAGTCCCATCCTTGCTGACAGGCATGAAACCGTTGCTCTGAGAAGATTAATGGTGTGCCCTAGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 90 bp TGGAGTTCCGTCTACACCCACATTCCTACACCTTCCTTCCTCTCTTaGCATGTGATCTCTCCACACAGGCTCCCCTTCTGTCTTCCACCT +
Preference number: 1 (lower is better)
Translates to: WSSVYTHIPTPSFLS*HVISPHRLPFCLPP
Trigger: AGGTGGAAGACAGAAGGGGAGCCTGTGTGGAGAGATCACATGGCAAGAGAGGAAGGAAGGTGTAGGAATGTGGGTGTAGACGGAACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR TCA 90 bp CAGAGTTCACCTGAGGTGACAGGGAGCACCAGCAGCTGTTTAGAATaGTCACACTGCACAATTCTAACAACCACCTGGTATCATCCCCGC +
Preference number: 1 (lower is better)
Translates to: QSSPEVTGSTSSCLE*SHCTILTTTWYHPR
Trigger: GCGGGGATGATACCAGGTGGTTGTTAGAATTGTGCAGTGTGATCATTCTAAACAGCTGCTGGTGCTCCCTGTCACCTCAGGTGAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 90 bp GTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATaGTGGTTTCTGGAGTTCCGTCTACACCCACATTCCTACACCTTC +
Preference number: 1 (lower is better)
Translates to: VLSVWLPSSELPHGP*WFLEFRLHPHSYTF
Trigger: GAAGGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR GCA 90 bp GTGTGTATTCAGAGTTGCGGTGGCAAACCTGAGGTATTTTCAGAGTaGTACCTCTCCAAGAGACCACAGAGTTCACCTGAGGTGACAGGG +
Preference number: 1 (lower is better)
Translates to: VCIQSCGGKPEVFSE*YLSKRPQSSPEVTG
Trigger: CCCTGTCACCTCAGGTGAACTCTGTGGTCTCTTGGAGAGGTAGCACTCTGAAAATACCTCAGGTTTGCCACCGCAACTCTGAATACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 90 bp CTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTaGGTGTGCATGTCATCAGCTATGATAATGGGAAACTGGCTGATG +
Preference number: 1 (lower is better)
Translates to: LDDGTECCTKACPRW*VCMSSAMIMGNWLM
Trigger: CATCAGCCAGTTTCCCATTATCATAGCTGATGACATGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR CCA 90 bp GATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATaGTGGGTGTGCATGTCATCAGCTATGATAATGGGAAACTGGCTG +
Preference number: 1 (lower is better)
Translates to: DLDDGTECCTKACPR*WVCMSSAMIMGNWL
Trigger: CAGCCAGTTTCCCATTATCATAGCTGATGACATGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR CCA 90 bp CCATTAATCTTCTCAGAGCAACGGTTTCATGCCTGTCAGCAAGGATaGGACTCCTGTCCACGTCTTCTTCGCCTCCCACAATTGCATGGT +
Preference number: 1 (lower is better)
Translates to: PLIFSEQRFHACQQG*DSCPRLLRLPQLHG
Trigger: ACCATGCAATTGTGGGAGGCGAAGAAGACGTGGACAGGAGTCCCATCCTTGCTGACAGGCATGAAACCGTTGCTCTGAGAAGATTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 90 bp TGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTaGAGTTCCGTCTACACCCACATTCCTACACCTTCCTTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: CGFHPQSCLMVHDGF*SSVYTHIPTPSFLS
Trigger: AGAGAGGAAGGAAGGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR TCA 90 bp GGTATTTTCAGAGTGCTACCTCTCCAAGAGACCACAGAGTTCACCTaGGGTGACAGGGAGCACCAGCAGCTGTTTAGAATGATCACACTG +
Preference number: 1 (lower is better)
Translates to: GIFRVLPLQETTEFT*GDREHQQLFRMITL
Trigger: CAGTGTGATCATTCTAAACAGCTGCTGGTGCTCCCTGTCACCTCAGGTGAACTCTGTGGTCTCTTGGAGAGGTAGCACTCTGAAAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 90 bp GTAAGCAGATTCAGAGTCATGGTCCCCGAATGCAATGCAAAGGCCTaGTGGCTGGGTGTCAATGCTGGCTCAATTAAGAATGCTGCTGAA +
Preference number: 1 (lower is better)
Translates to: VSRFRVMVPECNAKA*WLGVNAGSIKNAAE
Trigger: TTCAGCAGCATTCTTAATTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACCATGACTCTGAATCTGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 90 bp AGGATGGGACTCCTGTCCACGTCTTCTTCGCCTCCCACAATTGCATaGTCATGTGAATGCCCTGAACATCTTTACTACACAGGCCCTTAT +
Preference number: 1 (lower is better)
Translates to: RMGLLSTSSSPPTIA*SCECPEHLYYTGPY
Trigger: ATAAGGGCCTGTGTAGTAAAGATGTTCAGGGCATTCACATGACCATGCAATTGTGGGAGGCGAAGAAGACGTGGACAGGAGTCCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 90 bp GATTCAGAGTCATGGTCCCCGAATGCAATGCAAAGGCCTGCTGGCTaGGTGTCAATGCTGGCTCAATTAAGAATGCTGCTGAATGAACCT +
Preference number: 1 (lower is better)
Translates to: DSESWSPNAMQRPAG*VSMLAQLRMLLNEP
Trigger: AGGTTCATTCAGCAGCATTCTTAATTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACCATGACTCTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 90 bp AGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTaGCCCAGATGGTGGGTGTGCATGTCATCAGCTATGATAATGGGA +
Preference number: 1 (lower is better)
Translates to: RFGDLDDGTECCTKA*PRWWVCMSSAMIMG
Trigger: TCCCATTATCATAGCTGATGACATGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR GCA 90 bp CACGTCCATTTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTaGTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCATGTCATCA +
Preference number: 1 (lower is better)
Translates to: HVHLLRFGDLDDGTE*CTKACPRWWVCMSS
Trigger: TGATGACATGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAAATGGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR TCA 90 bp ACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGGAAGTTTaGGGTCCCTTGGTGACTTGCTTTTTCTGCCTGAATGGTGAGGAA +
Preference number: 1 (lower is better)
Translates to: TPPLFPVTESCGKEV*GPLVTCFFCLNGEE
Trigger: TTCCTCACCATTCAGGCAGAAAAAGCAAGTCACCAAGGGACCTCAAACTTCCTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR TCA 90 bp GACTCTGGTTCTTTAGGCCAAAATAAGGCCTGGGAATCTGCTGTTTaGACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTC +
Preference number: 1 (lower is better)
Translates to: DSGSLGQNKAWESAV*TSTPYDFDAEAVQV
Trigger: GACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAACAGCAGATTCCCAGGCCTTATTTTGGCCTAAAGAACCAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 90 bp GAGCAGCTTTCCTTTTGTGTGTATTCAGAGTTGCGGTGGCAAACCTaGGGTATTTTCAGAGTGCTACCTCTCCAAGAGACCACAGAGTTC +
Preference number: 1 (lower is better)
Translates to: EQLSFCVYSELRWQT*GIFRVLPLQETTEF
Trigger: GAACTCTGTGGTCTCTTGGAGAGGTAGCACTCTGAAAATACCTCAGGTTTGCCACCGCAACTCTGAATACACACAAAAGGAAAGCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 90 bp CGGAATTGGCTGCTTCTTTATCATCAGGGTTTCAGCTCTTCTTTCTaGTTTACCGTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCT +
Preference number: 1 (lower is better)
Translates to: RNWLLLYHQGFSSSF*FTVLSVWLPSSELP
Trigger: AGGCAACTCTGAGGATGGAAGCCACACACTAAGGACGGTAAAGCAGAAAGAAGAGCTGAAACCCTGATGATAAAGAAGCAGCCAATTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR CCA 90 bp CCCAGATGGTGGGTGTGCATGTCATCAGCTATGATAATGGGAAACTaGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAA +
Preference number: 1 (lower is better)
Translates to: PRWWVCMSSAMIMGN*LMERAQLRYVTQWK
Trigger: TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCATTATCATAGCTGATGACATGCACACCCACCATCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR TCA 90 bp ACACAGGCCCTTATCACTGACAGAGTTGCAGTGAAGAGGGTCCACTaGAGAACATCTAGGAACAGCAAACTCTACACAGCTTCAACAAAG +
Preference number: 1 (lower is better)
Translates to: TQALITDRVAVKRVH*RTSRNSKLYTASTK
Trigger: CTTTGTTGAAGCTGTGTAGAGTTTGCTGTTCCTAGATGTTCTTCAGTGGACCCTCTTCACTGCAACTCTGTCAGTGATAAGGGCCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 90 bp GAGCTCCTCTTCTGGAACTCCCTTCAGAGCTACATCAAGAGCCAATaGGAAGACCATCTTCTCCTCATAGTTACAATTTGGTTTCACTCC +
Preference number: 1 (lower is better)
Translates to: ELLFWNSLQSYIKSQ*EDHLLLIVTIWFHS
Trigger: GGAGTGAAACCAAATTGTAACTATGAGGAGAAGATGGTCTTCTCATTGGCTCTTGATGTAGCTCTGAAGGGAGTTCCAGAAGAGGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 90 bp GGAAGTTTGAGGTCCCTTGGTGACTTGCTTTTTCTGCCTGAATGGTaGGGAATTCTTTCTTCATTCTTGAAGTTCAGGATCTTCATCAGG +
Preference number: 1 (lower is better)
Translates to: GSLRSLGDLLFLPEW*GILSSFLKFRIFIR
Trigger: CCTGATGAAGATCCTGAACTTCAAGAATGAAGAAAGAATTCCTCACCATTCAGGCAGAAAAAGCAAGTCACCAAGGGACCTCAAACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR TCA 90 bp ACTAAGCCAGAAGCTGCTGTGATTCTATGGCAGCCTTATCTCTTATaGCACGTCCATTTACTAAGATTTGGTGATCTGGATGATGGCACA +
Preference number: 1 (lower is better)
Translates to: TKPEAAVILWQPYLL*HVHLLRFGDLDDGT
Trigger: TGTGCCATCATCCAGATCACCAAATCTTAGTAAATGGACGTGTCATAAGAGATAAGGCTGCCATAGAATCACAGCAGCTTCTGGCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR TCA 90 bp AGTGCAATGAGAAATCATGCAAATAGTCACTGTACACAGGACTATTaGCTGTCTGAGACAGGATGGGAATTGGGAACATTTACAGGGAAG +
Preference number: 1 (lower is better)
Translates to: SAMRNHANSHCTQDY*LSETGWELGTFTGK
Trigger: CTTCCCTGTAAATGTTCCCAATTCCCATCCTGTCTCAGACAGTCAATAGTCCTGTGTACAGTGACTATTTGCATGATTTCTCATTGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 90 bp TTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGTAAAGTTTACTaGAATGCAGATTCCTATGTCCCACCACCTAGACTCTGGTTCTTT +
Preference number: 1 (lower is better)
Translates to: LLFNTVCRRITCKVY*NADSYVPPPRLWFF
Trigger: AAAGAACCAGAGTCTAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTCTGCACACAGTATTGAAGAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 90 bp AGCTTCTTTATTCATTTGAACACTTCAATATTCTGTCTTCTTCAATaGTTCCCCCTTGCCCGTATTTTCAGCTGGAACAGTTTCTCATTT +
Preference number: 1 (lower is better)
Translates to: SFFIHLNTSIFCLLQ*FPLARIFSWNSFSF
Trigger: AAATGAGAAACTGTTCCAGCTGAAAATACGGGCAAGGGGGAATCATTGAAGAAGACAGAATATTGAAGTGTTCAAATGAATAAAGAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396259.5
3UTR-3UTR TCA 90 bp GATACTCTCACATACTTCCTTCTCTCCAGGAGGCATCTCGGGGCTTGCTGGGCACCGCCTGATTCTGAGTaGCAGCCCTCCTGGGCCACC +
Preference number: 2 (lower is better)
Translates to: DTLTYFLLSRRHLGACWAPPDSE*QPSWAT
Trigger: GGTGGCCCAGGAGGGCTGTCACTCAGAATCAGGCGG...TGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR CAA 90 bp GGATACTCTCACATACTTCCTTCTCTCCAGGAGGCATCTCGGGGCTaGCTGGGCATCCTGGCCCAGGAGAGGCATTTAGTCCAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: GYSHILPSLQEASRG*LGILAQERHLVQAD
Trigger: ATCAGCCTGGACTAAATGCCTCTCCTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR CAA 90 bp TTGCCATGTGATCTCTCCACACAGGCTCCCCTTCTGTCTTCCACCTaGAGTGGAAGCAGCCTGAGGCCTGCACCAGGTGCAGATGTTGGT +
Preference number: 2 (lower is better)
Translates to: LPCDLSTQAPLLSST*SGSSLRPAPGADVG
Trigger: ACCAACATCTGCACCTGGTGCAGGCCTCAGGCTGCTTCCACTCAAGGTGGAAGACAGAAGGGGAGCCTGTGTGGAGAGATCACATGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CCA 90 bp TTAACTCAGGATACTCTCACATACTTCCTTCTCTCCAGGAGGCATCTCGGGGCTTCCAGGCTGATCCCCTaGAGAGAGGCGTCACCCAGA +
Preference number: 2 (lower is better)
Translates to: LTQDTLTYFLLSRRHLGASRLIP*REASPR
Trigger: TCTGGGTGACGCCTCTCTCCAGGGGATCAGCCTGGA...AGCCCCGAGATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTATCCTGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR-3UTR GCA 90 bp CTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATCAGATTCTGCTGTACTAAAGCCTaGCCCAGATGGTGGGTGTGC +
Preference number: 2 (lower is better)
Translates to: LHQVQMLVPCFLYSLIRFCCTKA*PRWWVC
Trigger: GCACACCCACCATCTGGGGCAGGCTTTAGTACAGCA...GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CCA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCAAATGAGATCTGGAGGTaGGCAGTGCAGGACGGAATT +
Preference number: 2 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCANEIWR*AVQDGI
Trigger: AATTCCGTCCTGCACTGCCCACCTCCAGATCTCATT...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR CAA 90 bp CAGCAAGGATGGGACTCCTGTCCACGTCTTCTTCGCCTCCCACAATaGCATGGTCATGTGAATGCCCTGAACATCTTTACTACACAGGCC +
Preference number: 2 (lower is better)
Translates to: QQGWDSCPRLLRLPQ*HGHVNALNIFTTQA
Trigger: GGCCTGTGTAGTAAAGATGTTCAGGGCATTCACATGACCATGCAATTGTGGGAGGCGAAGAAGACGTGGACAGGAGTCCCATCCTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCACTCAGAGTTGCCTCATaGTCCATGATGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCALRVAS*SMMVSG
Trigger: TCCAGAAACCATCATGGACCATGAGGCAACTCTGAG...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp AGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTCCATCCTCAGAGTTaGCTCATGGTCCATGATGGT +
Preference number: 2 (lower is better)
Translates to: RSGGGQCRTELAASLSSGFHPQS*LMVHDG
Trigger: ACCATCATGGACCATGAGGCAACTCTGAGGATGGAA...CCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCATCAATGATTCCCCCTTaGCCGTATTTTCAGCTGGAA +
Preference number: 2 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCASMIPP*PYFQLE
Trigger: TTCCAGCTGAAAATACGGGCAAGGGGGAATCATTGA...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp AGATCTCACTTAACTCAGGATACTCTCACATACTTCCTTCTCTCCAGGAGGCATTGGGTCATCATGTCCTaGAGGCCACTCTGCACCCGC +
Preference number: 2 (lower is better)
Translates to: RSHLTQDTLTYFLLSRRHWVIMS*RPLCTR
Trigger: GCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCA...ATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTATCCTGAGTTAAGTGAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR-3UTR CCA 90 bp GAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGCTCAGAGTTGCCTCATaGTCCATGATGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: EIWRWAVQDGIGCFFIIRLRVAS*SMMVSG
Trigger: TCCAGAAACCATCATGGACCATGAGGCAACTCTGAG...CCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CCA 90 bp CTCAGCGGTGGTGCTAAGGGACTAACACAGACTTTAAGGTCACAAAACCATTGTGCCTGCCCCAGATGGTaGGTGTGCATGTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: LSGGAKGLTQTLRSQNHCACPRW*VCMSSA
Trigger: AGCTGATGACATGCACACCCACCATCTGGGGCAGGC...ACAATGGTTTTGTGACCTTAAAGTCTGTGTTAGTCCCTTAGCACCACCGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR TCA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAAGAGTGTGTGAGAGAGTaGGATGGGGGAGGGATGCAA +
Preference number: 2 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKECVRE*DGGGMQ
Trigger: TTGCATCCCTCCCCCATCTCACTCTCTCACACACTC...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp TCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTTTCCATCCTCAGAGTTaGCTCATGGTCCATGATGGT +
Preference number: 2 (lower is better)
Translates to: SGGGQCRTELAASLSSGFFHPQS*LMVHDG
Trigger: ACCATCATGGACCATGAGGCAACTCTGAGGATGGAA...AAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp ATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTTCCATCCTCAGAGTTaGCTCATGGTCCATGATGGT +
Preference number: 2 (lower is better)
Translates to: IWRWAVQDGIGCFFIIRVFHPQS*LMVHDG
Trigger: ACCATCATGGACCATGAGGCAACTCTGAGGATGGAA...AACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CCA 90 bp CTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATCAGATTCTGTGAGAGAGTGAGATaGGGGAGGGATGCAATGAAT +
Preference number: 2 (lower is better)
Translates to: LHQVQMLVPCFLYSLIRFCERVR*GRDAMN
Trigger: ATTCATTGCATCCCTCCCCCATCTCACTCTCTCACA...GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTCAGGCACGCAGCCCTaGGCTAAGGTGGTGCCAGAT +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEASGTQP*AKVVPD
Trigger: ATCTGGCACCACCTTAGCCCAGGGCTGCGTGCCTGA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 90 bp ATCTCAAATGACCTGTCCCACCTCTCTCATATTCTCCCCTCCAACTaGGGGCTAGGGCACACCATTAATCTTCTCAGAGCAACGGTTTCA +
Preference number: 2 (lower is better)
Translates to: ISNDLSHLSHILPSN*GLGHTINLLRATVS
Trigger: TGAAACCGTTGCTCTGAGAAGATTAATGGTGTGCCCTAGCCCCAAGTTGGAGGGGAGAATATGAGAGAGGTGGGACAGGTCATTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCCTGACAGAGTTGCAGTaGAGAGGGTCCACTGAAGAA +
Preference number: 2 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLLTELQ*RGSTEE
Trigger: TTCTTCAGTGGACCCTCTTCACTGCAACTCTGTCAG...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAGGTCCCCGAATGCAATaGAAAGGCCTGCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLGPRMQ*KGLLAG
Trigger: CCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACC...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp GAGAGAGGTCCCAAGAGCATTACACCAGATCTCCTACGAAGATGTGGGATTTCCCTCAGAGTTGCCTCATaGTCCATGATGGTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: ERGPKSITPDLLRRCGISLRVAS*SMMVSG
Trigger: TCCAGAAACCATCATGGACCATGAGGCAACTCTGAG...GGAAATCCCACATCTTCGTAGGAGATCTGGTGTAATGCTCTTGGGACCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CCA 90 bp TTTCCTCTAGGAAAAGGTGTGTATCCAGGTAATTTACTAAGCCAGAAGCTGCTGGCCTGCCCCAGATGGTaGGTGTGCATGTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: FPLGKGVYPGNLLSQKLLACPRW*VCMSSA
Trigger: AGCTGATGACATGCACACCCACCATCTGGGGCAGGC...CAGCAGCTTCTGGCTTAGTAAATTACCTGGATACACACCTTTTCCTAGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR TCA 90 bp GAGAGAGGTCCCAAGAGCATTACACCAGATCTCCTACGAAGATGTGGGATTTCCTTTGTTTCACATGAATaGGATCTGGAGGTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: ERGPKSITPDLLRRCGISFVSHE*DLEVGS
Trigger: ACTGCCCACCTCCAGATCTCATTCATGTGAAACAAA...GGAAATCCCACATCTTCGTAGGAGATCTGGTGTAATGCTCTTGGGACCTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp ATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTTCAGCTCTTCTTTCTaGTTTACCGTCCTTAGTGTG +
Preference number: 2 (lower is better)
Translates to: IWRWAVQDGIGCFFIIRVFSSSF*FTVLSV
Trigger: CACACTAAGGACGGTAAAGCAGAAAGAAGAGCTGAA...AACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGCCCAGATGGTGGGTGTaGATGTCATCAGCTATGATA +
Preference number: 2 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQPRWWV*MSSAMI
Trigger: TATCATAGCTGATGACATGCACACCCACCATCTGGG...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGTCATGGTCCCCGAATaGAATGCAAAGGCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAVMVPE*NAKACW
Trigger: CCAGCAGGCCTTTGCATTGCATTCGGGGACCATGAC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp CTCAGCGGTGGTGCTAAGGGACTAACACAGACTTTAAGGTCACAAAACCATTGTAGGTGCAGATGTTGGTaGCATGCTTCTTGTACAGCC +
Preference number: 2 (lower is better)
Translates to: LSGGAKGLTQTLRSQNHCRCRCW*HASCTA
Trigger: GGCTGTACAAGAAGCATGGCACCAACATCTGCACCT...ACAATGGTTTTGTGACCTTAAAGTCTGTGTTAGTCCCTTAGCACCACCGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCCAGCAGCTTATCATTTaGTTTCCAGTAGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLQQLII*FPVGLL
Trigger: CAGCAGGCCTACTGGAAACCAAATGATAAGCTGCTG...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCCCTCCCACAATTGCATaGTCATGTGAATGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLPPTIA*SCECPE
Trigger: TTCAGGGCATTCACATGACCATGCAATTGTGGGAGG...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGCCTGTCAGCAAGGATaGGACTCCTGTCCACGTCTT +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAACQQG*DSCPRL
Trigger: AAGACGTGGACAGGAGTCCCATCCTTGCTGACAGGC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCAAAGGCCTGCTGGCTaGGTGTCAATGCTGGCTCAA +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAQRPAG*VSMLAQ
Trigger: TTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTACACTCGAGGCAGCATaGTCTACTGAGACTAGGGCC +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEATLEAA*STETRA
Trigger: GGCCCTAGTCTCAGTAGACCATGCTGCCTCGAGTGT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 90 bp ATAAGGCCTGGGAATCTGCTGTTTGAACAAGCACTCCATATGACTTaGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTC +
Preference number: 2 (lower is better)
Translates to: IRPGNLLFEQALHMT*MQRQSRSHLEIIWL
Trigger: GAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAACAGCAGATTCCCAGGCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TTTCCTCTAGGAAAAGGTGTGTATCCAGGTAATTTACTAAGCCAGAAGCTGCTGAGGAACCATCGAGGCTaGCAACCTGTAGTCCTAGGT +
Preference number: 2 (lower is better)
Translates to: FPLGKGVYPGNLLSQKLLRNHRG*QPVVLG
Trigger: ACCTAGGACTACAGGTTGGCAGCCTCGATGGTTCCT...CAGCAGCTTCTGGCTTAGTAAATTACCTGGATACACACCTTTTCCTAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CCA 90 bp GAAAGAGCACAGCTCCGATATGTGACACAATGGAAACATTTGGGCATTAGAAAGAAAGCCTGCCCCAGATaGTGGGTGTGCATGTCATCA +
Preference number: 2 (lower is better)
Translates to: ERAQLRYVTQWKHLGIRKKACPR*WVCMSS
Trigger: TGATGACATGCACACCCACCATCTGGGGCAGGCTTT...CTTTCTAATGCCCAAATGTTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAATGCAAAGGCCTGCTaGCTGGGTGTCAATGCTGGC +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLNAKAC*LGVNAG
Trigger: GCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAACACTCGAGGCAGCATaGTCTACTGAGACTAGGGCC +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLTLEAA*STETRA
Trigger: GGCCCTAGTCTCAGTAGACCATGCTGCCTCGAGTGT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp CTCAGCGGTGGTGCTAAGGGACTAACACAGACTTTAAGGTCACAAAACCATTGTTTTGTTTCACATGAATaGGATCTGGAGGTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: LSGGAKGLTQTLRSQNHCFVSHE*DLEVGS
Trigger: ACTGCCCACCTCCAGATCTCATTCATGTGAAACAAA...ACAATGGTTTTGTGACCTTAAAGTCTGTGTTAGTCCCTTAGCACCACCGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR TCA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAACATTTTCCCTATTTCTaGACACTTTCAGGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKHFPYF*TLSGAS
Trigger: GGAAGCCCCTGAAAGTGTTCAGAAATAGGGAAAATG...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAGGGGTTGGAGAGGGTTaGGGCTGTTGCTGGAAATTA +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLGVGEG*GCCWKL
Trigger: TAATTTCCAGCAACAGCCTCAACCCTCTCCAACCCC...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGTGAAGAGGGTCCACTaGAGAACATCTAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAVKRVH*RTSRNS
Trigger: GCTGTTCCTAGATGTTCTTCAGTGGACCCTCTTCAC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTAGGTGTCATCTCAAATaGCCTGTCCCACCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEARCHLK*PVPPLS
Trigger: TGAGAGAGGTGGGACAGGTCATTTGAGATGACACCT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTAGGCTCAACATTCTGTaGGAGCTCCTCTTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEARLNIL*ELLFWN
Trigger: GTTCCAGAAGAGGAGCTCTCACAGAATGTTGAGCCT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATGCAATGCAAAGGCCTaGTGGCTGGGTGTCAATGCT +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLCNAKA*WLGVNA
Trigger: AGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCACCTTGCTTTTGAAGTaGAGTAATAATCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLTLLLK*SNNPSG
Trigger: CCCAGAGGGATTATTACTCCACTTCAAAAGCAAGGT...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGCTGACAGAGTTGCAGTaGAGAGGGTCCACTGAAGAA +
Preference number: 2 (lower is better)
Translates to: PAIIFILIREGDLYSLLMLTELQ*RGSTEE
Trigger: TTCTTCAGTGGACCCTCTTCACTGCAACTCTGTCAG...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAAGGTGTCATCTCAAATaGCCTGTCCCACCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLRCHLK*PVPPLS
Trigger: TGAGAGAGGTGGGACAGGTCATTTGAGATGACACCT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAGAGTTCACCTGAGGTaGCAGGGAGCACCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSRVHLR*QGAPAA
Trigger: AGCTGCTGGTGCTCCCTGTCACCTCAGGTGAACTCT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTTGCGGTGGCAAACCTaGGGTATTTTCAGAGTGCTA +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEALRWQT*GIFRVL
Trigger: TAGCACTCTGAAAATACCTCAGGTTTGCCACCGCAA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGCAAAATGGCCATGCTaGGCAGCTTTCCTTTTGTGT +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAAKWPC*AAFLLC
Trigger: ACACAAAAGGAAAGCTGCTCAGCATGGCCATTTTGC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAAATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 2 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTCCATCCTAGAGATCTaGAGCAGGAACAGCATCATC +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEASILEI*SRNSII
Trigger: GATGATGCTGTTCCTGCTGCAGATCTCTAGGATGGA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAAGCCCGTATTTTCAGCTaGAACAGTTTCTCATTTTCC +
Preference number: 2 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKARIFS*NSFSFS
Trigger: GGAAAATGAGAAACTGTTCCAGCTGAAAATACGGGC...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATGCCTGTCAGCAAGGATaGGACTCCTGTCCACGTCTT +
Preference number: 2 (lower is better)
Translates to: SGREITHTHLGKIQNNQHACQQG*DSCPRL
Trigger: AAGACGTGGACAGGAGTCCCATCCTTGCTGACAGGC...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGACCTTGCTTTTGAAGTaGAGTAATAATCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLTLLLK*SNNPSG
Trigger: CCCAGAGGGATTATTACTCCACTTCAAAAGCAAGGT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCAAAGGCCTGCTGGCTaGGTGTCAATGCTGGCTCAA +
Preference number: 2 (lower is better)
Translates to: SGREITHTHLGKIQNNQHQRPAG*VSMLAQ
Trigger: TTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTAAGGACCTTCTACCCTaGATAACTACCTCATGCTGG +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAKDLLP*ITTSCW
Trigger: CCAGCATGAGGTAGTTATCCAGGGTAGAAGGTCCTT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp GAAAGAGCACAGCTCCGATATGTGACACAATGGAAACATTTGGGCATTAGAAAGACCAGGTGCAGATGTTaGTGCCATGCTTCTTGTACA +
Preference number: 2 (lower is better)
Translates to: ERAQLRYVTQWKHLGIRKTRCRC*CHASCT
Trigger: TGTACAAGAAGCATGGCACCAACATCTGCACCTGGT...CTTTCTAATGCCCAAATGTTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR TCA 90 bp AACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGGAACTTGCTTTTTCTGCCTaGATGGTGAGGAATTCTTTC +
Preference number: 2 (lower is better)
Translates to: NFGNTPPLFPVTESCGKELAFSA*MVRNSF
Trigger: GAAAGAATTCCTCACCATTCAGGCAGAAAAAGCAAG...TTCCTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR-3UTR TCA 90 bp GGATTTCCTCTAGGAAAAGGTGTGTATCCAGGTAATTTACTAAGCCAGAAGCTGCACAGCTCCGATATGTaGCACAATGGAAACATTTGG +
Preference number: 2 (lower is better)
Translates to: GFPLGKGVYPGNLLSQKLHSSDM*HNGNIW
Trigger: CCAAATGTTTCCATTGTGTCACATATCGGAGCTGTG...CAGCTTCTGGCTTAGTAAATTACCTGGATACACACCTTTTCCTAGAGGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCAGCTGCATTTTGCCTaGTCTGCACTTTTGGTGATT +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAQLHFA*SALLVI
Trigger: AATCACCAAAAGTGCAGAGCAGGCAAAATGCAGCTG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCATGGCTTCTCTCCGATaGACACTCGAGGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLMASLR*TLEAAW
Trigger: CCATGCTGCCTCGAGTGTGCATCGGAGAGAAGCCAT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATCCATCCTAGAGATCTaGAGCAGGAACAGCATCATC +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLSILEI*SRNSII
Trigger: GATGATGCTGTTCCTGCTGCAGATCTCTAGGATGGA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACAGCAGCTTATCATTTaGTTTCCAGTAGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLQQLII*FPVGLL
Trigger: CAGCAGGCCTACTGGAAACCAAATGATAAGCTGCTG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACCTCCCACAATTGCATaGTCATGTGAATGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLPPTIA*SCECPE
Trigger: TTCAGGGCATTCACATGACCATGCAATTGTGGGAGG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCAATGCAAAGGCCTGCTaGCTGGGTGTCAATGCTGGC +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLNAKAC*LGVNAG
Trigger: GCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCTGGGGAAGGTACCCATaGCTTCTCTCCGATGCACAC +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSWGRYP*LLSDAH
Trigger: GTGTGCATCGGAGAGAAGCCATGGGTACCTTCCCCA...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGGGGTTGGAGAGGGTTaGGGCTGTTGCTGGAAATTA +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLGVGEG*GCCWKL
Trigger: TAATTTCCAGCAACAGCCTCAACCCTCTCCAACCCC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGTCTAAACCTTGCTTTTaGAGTGGAGTAATAATCCCT +
Preference number: 2 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLSKPCF*SGVIIP
Trigger: AGGGATTATTACTCCACTTCAAAAGCAAGGTTTAGA...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATAGAGCAACGGTTTCATaGCTGTCAGCAAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: SGREITHTHLGKIQNNQHRATVS*LSARMG
Trigger: TCCCATCCTTGCTGACAGGCATGAAACCGTTGCTCT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCTGCAATGCAAAGGCCTaGTGGCTGGGTGTCAATGCT +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLCNAKA*WLGVNA
Trigger: AGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCA...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGTGGATAACTACCTCATaGTGGAACTTCCCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: PAIIFILIREGDLYSLLMWITTS*WNFPSC
Trigger: ACAGGAAGGGAAGTTCCAGCATGAGGTAGTTATCCA...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp GAAAGAGCACAGCTCCGATATGTGACACAATGGAAACATTTGGGCATTAGAAAGATGATAATGGGAAACTaGCTGATGGAAAGAGCACAG +
Preference number: 2 (lower is better)
Translates to: ERAQLRYVTQWKHLGIRKMIMGN*LMERAQ
Trigger: CTGTGCTCTTTCCATCAGCCAGTTTCCCATTATCAT...CTTTCTAATGCCCAAATGTTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCAGCTTGGGTTTGGGTaGCCCATTAGACTAAAATAT +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAQLGFG*PIRLKY
Trigger: ATATTTTAGTCTAATGGGCCACCCAAACCCAAGCTG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAGTCCAGGTCACACTTaGAAATTATCTGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLSPGHT*KLSGSS
Trigger: AGAGGAGCCAGATAATTTCCAAGTGTGACCTGGACT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAAGTCCAGGTCACACTTaGAAATTATCTGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLSPGHT*KLSGSS
Trigger: AGAGGAGCCAGATAATTTCCAAGTGTGACCTGGACT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 90 bp AAATGCCTCGCATCATCGTCTATTGCTCATGACCCTCTGACTCTATaGCCTGATCTGATGTTTCTCCATATGTATGATTTTCACAATCAG +
Preference number: 2 (lower is better)
Translates to: KCLASSSIAHDPLTL*PDLMFLHMYDFHNQ
Trigger: CTGATTGTGAAAATCATACATATGGAGAAACATCAGATCAGGCAATAGAGTCAGAGGGTCATGAGCAATAGACGATGATGCGAGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGTGAAGAGGGTCCACTaGAGAACATCTAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSVKRVH*RTSRNS
Trigger: GCTGTTCCTAGATGTTCTTCAGTGGACCCTCTTCAC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAGGCTCAACATTCTGTaGGAGCTCCTCTTCTGGAAC +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSRLNIL*ELLFWN
Trigger: GTTCCAGAAGAGGAGCTCTCACAGAATGTTGAGCCT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAGCATGGTCATGTGAATaGCCTGAACATCTTTACTAC +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLAWSCE*PEHLYY
Trigger: GTAGTAAAGATGTTCAGGGCATTCACATGACCATGC...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGAGAGCAACGGTTTCATaGCTGTCAGCAAGGATGGGA +
Preference number: 2 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVRATVS*LSARMG
Trigger: TCCCATCCTTGCTGACAGGCATGAAACCGTTGCTCT...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGAGATTGATAAACAGCTaGATTTTGCCTGCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: PAIIFILIREGDLYSLLMRLINS*ILPALH
Trigger: GTGCAGAGCAGGCAAAATGCAGCTGTTTATCAATCT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TGCTCTTATATCCTCCCTTCTCCCATTCCCAATTTATTAGCTATCTTAGGGTTTCGTCACAGAATCTTGTaGAAAGGAAGTTTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: CSYILPSPIPNLLAILGFRHRIL*KGSLRS
Trigger: GGACCTCAAACTTCCTTTCCACAAGATTCTGTGACG...AAACCCTAAGATAGCTAATAAATTGGGAATGGGAGAAGGGAGGATATAAGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAATAACTACCTCATGCTaGAACTTCCCTTCCTGTTAC +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLITTSC*NFPSCY
Trigger: GTAACAGGAAGGGAAGTTCCAGCATGAGGTAGTTAT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATAAGGACCTTCTACCCTaGATAACTACCTCATGCTGG +
Preference number: 2 (lower is better)
Translates to: SGREITHTHLGKIQNNQHKDLLP*ITTSCW
Trigger: CCAGCATGAGGTAGTTATCCAGGGTAGAAGGTCCTT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCTATTCTGTCTGATCTaGGTTCTCAATGATCTCAGA +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEALFCLI*VLNDLR
Trigger: TCTGAGATCATTGAGAACCCAGATCAGACAGAATAG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AGCTGGAACAGTTTCTCATTTTCCCTATTTCTGAACACTTTCAGGGGCTTCCTTTTATTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 2 (lower is better)
Translates to: SWNSFSFSLFLNTFRGFLLFRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAATAA...AAGGAAGCCCCTGAAAGTGTTCAGAAATAGGGAAAATGAGAAACTGTTCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR CAA 90 bp GCTTTTGAGATTGATAAACAGCTGCATTTTGCCTGCTCTGCACTTTaGGTGATTAAACCGAGATTGATTGGTAAGCAGATTCAGAGTCAT +
Preference number: 2 (lower is better)
Translates to: AFEIDKQLHFACSAL*VIKPRLIGKQIQSH
Trigger: ATGACTCTGAATCTGCTTACCAATCAATCTCGGTTTAATCACCAAAAGTGCAGAGCAGGCAAAATGCAGCTGTTTATCAATCTCAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp ACCCAAAGTTCTTATAGCAGTGACCTTTGGTCTATAATGCATGTAGAAGTATTGTCTCTTTGTTTCACATaGATGAGATCTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TQSSYSSDLWSIMHVEVLSLCFT*MRSGGG
Trigger: CCCACCTCCAGATCTCATTCATGTGAAACAAAGAGA...CAATACTTCTACATGCATTATAGACCAAAGGTCACTGCTATAAGAACTTTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACTCATCTTTCAACTATaGCACTGTCCCAAAGCTTTT +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLLIFQL*HCPKAF
Trigger: AAAAGCTTTGGGACAGTGTCATAGTTGAAAGATGAG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAGCAGCTGTTTAGAATaGTCACACTGCACAATTCTA +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLSSCLE*SHCTIL
Trigger: TAGAATTGTGCAGTGTGATCATTCTAAACAGCTGCT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTACAGGGAGGAAATACTaGCCACACTTTAAATATATG +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEATGRKY*PHFKYM
Trigger: CATATATTTAAAGTGTGGTCAGTATTTCCTCCCTGT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATCTGCTCTTATAACTTaGTGTTCAAGTCTACAGCAG +
Preference number: 2 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLSALIT*CSSLQQ
Trigger: CTGCTGTAGACTTGAACAGCAAGTTATAAGAGCAGA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCCCTGGGCTAAGGTGGTaGCAGATACTCTACATATGT +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSPGLRW*QILYIC
Trigger: ACATATGTAGAGTATCTGGCACCACCTTAGCCCAGG...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGCAGATTCAGAGTCATaGTCCCCGAATGCAATGCAA +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLADSES*SPNAMQ
Trigger: TTGCATTGCATTCGGGGACCATGACTCTGAATCTGC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCTCATAGTTACAATTTaGTTTCACTCCCAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEALIVTI*FHSQKG
Trigger: TCCCTTTTGGGAGTGAAACCAAATTGTAACTATGAG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGCTGCTCCTGGGAAATaGGGCAGAACAAACATAAGT +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSAAPGK*GRTNIS
Trigger: ACTTATGTTTGTTCTGCCCCATTTCCCAGGAGCAGC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTATCTAAACCTTGCTTTTaGAGTGGAGTAATAATCCCT +
Preference number: 2 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLSKPCF*SGVIIP
Trigger: AGGGATTATTACTCCACTTCAAAAGCAAGGTTTAGA...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCTATACTCACTGCTCATaGGAGTGGGAGGGAAATAAC +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLYTHCS*EWEGNN
Trigger: GTTATTTCCCTCCCACTCTCATGAGCAGTGAGTATA...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp TATCTATACTGTGACTATAATTTCCAGTTTGACCTTGGTTCACCACCAGCTTTTGTGACTTGCTTTTTCTaGCTGAATGGTGAGGAATTC +
Preference number: 2 (lower is better)
Translates to: YLYCDYNFQFDLGSPPAFVTCFF*LNGEEF
Trigger: GAATTCCTCACCATTCAGGCAGAAAAAGCAAGTCAC...AAAAGCTGGTGGTGAACCAAGGTCAAACTGGAAATTATAGTCACAGTATAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCCAGCTGCATTTTGCCTaGTCTGCACTTTTGGTGATT +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLQLHFA*SALLVI
Trigger: AATCACCAAAAGTGCAGAGCAGGCAAAATGCAGCTG...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp CTACCAGCTCATCCATCATTGAGTTATTTGGTTCATCTTTCCTATCAAATGGTTTTTCTGCCTGAATGGTaGGGAATTCTTTCTTCATTC +
Preference number: 2 (lower is better)
Translates to: LPAHPSLSYLVHLSYQMVFLPEW*GILSSF
Trigger: GAATGAAGAAAGAATTCCTCACCATTCAGGCAGAAA...AACCATTTGATAGGAAAGATGAACCAAATAACTCAATGATGGATGAGCTGGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCCCTCTTCTTGGAAAGTaGTTACACATCAGCGCAAAT +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSPLLGK*LHISAN
Trigger: ATTTGCGCTGATGTGTAATCACTTTCCAAGAAGAGG...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGGCATGGTCATGTGAATaGCCTGAACATCTTTACTAC +
Preference number: 2 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVAWSCE*PEHLYY
Trigger: GTAGTAAAGATGTTCAGGGCATTCACATGACCATGC...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAGATTGATAAACAGCTaGATTTTGCCTGCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSRLINS*ILPALH
Trigger: GTGCAGAGCAGGCAAAATGCAGCTGTTTATCAATCT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCATAACTACCTCATGCTaGAACTTCCCTTCCTGTTAC +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSITTSC*NFPSCY
Trigger: GTAACAGGAAGGGAAGTTCCAGCATGAGGTAGTTAT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCTCTGCTCTTATAACTTaGTGTTCAAGTCTACAGCAG +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSSALIT*CSSLQQ
Trigger: CTGCTGTAGACTTGAACAGCAAGTTATAAGAGCAGA...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCACTGTGCAGAAGAATaGCCACTCAATATTGTTTTA +
Preference number: 2 (lower is better)
Translates to: SGREITHTHLGKIQNNQHHCAEE*PLNIVL
Trigger: TAAAACAATATTGAGTGGGCATTCTTCTGCACAGTG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR GCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCACTATCCCCGAGTCCTaGCATCATATTCATACTAAT +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSTIPES*HHIHTN
Trigger: ATTAGTATGAATATGATGGCAGGACTCGGGGATAGT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCACGTGTAAAGTTTACTaGAATGCAGATTCCTATGTC +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLTCKVY*NADSYV
Trigger: GACATAGGAATCTGCATTTCAGTAAACTTTACACGT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAAATGCTTTGAGCGATaGGAACAAAGTGATTACTCT +
Preference number: 2 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSKCFER*EQSDYS
Trigger: AGAGTAATCACTTTGTTCTCATCGCTCAAAGCATTT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCCTCTTTCTACAGATGTaGAAAAAGGGTAATTGGAAA +
Preference number: 2 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLLFLQM*KKGNWK
Trigger: TTTCCAATTACCCTTTTTCCACATCTGTAGAAAGAG...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp GGGCATCCTGGCCCAGGAGAGGCATTTAGTCCAGGCTaGTCCCCTGGAGAGAGGCGTCACCCAGATGTGATG +
Preference number: 3 (lower is better)
Translates to: GHPGPGEAFSPG*SPGERRHPDVM
Trigger: CATCACATCTGGGTGACGCCTCTCTCCAGGGGATCAGCCTGGACTAAATGCCTCTCCTGGGCCAGGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR GCA 72 bp GTCTCATGCTGGGTCATCATGTCCTGCAGGCCACTCTaGACCCGCCTGATTCTGAGTGACAGCCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: VSCWVIMSCRPL*TRLILSDSPPG
Trigger: CCCAGGAGGGCTGTCACTCAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCAGCATGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR CCA 72 bp AGGCGTCACCCAGATGTGATGCATCCTGTCTCATGCTaGGTCATCATGTCCTGCAGGCCACTCTGCACCCGC +
Preference number: 3 (lower is better)
Translates to: RRHPDVMHPVSC*VIMSCRPLCTR
Trigger: GCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR CCA 72 bp CCCATGGCTTCTCTCCGATGCACACTCGAGGCAGCATaGTCTACTGAGACTAGGGCCAGGGTTGGAGCATCA +
Preference number: 3 (lower is better)
Translates to: PMASLRCTLEAA*STETRARVGAS
Trigger: TGATGCTCCAACCCTGGCCCTAGTCTCAGTAGACCATGCTGCCTCGAGTGTGCATCGGAGAGAAGCCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp CAGGCTGATCCCCTGGAGAGAGGCGTCACCCAGATGTaGTGCATCCTGTCTCATGCTGGGTCATCATGTCCT +
Preference number: 3 (lower is better)
Translates to: QADPLERGVTQM*CILSHAGSSCP
Trigger: AGGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACGCCTCTCTCCAGGGGATCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR GCA 72 bp CCCACTGATCAGGCACGCAGCCCTGGGCTAAGGTGGTaGCAGATACTCTACATATGTGCTAGAAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PTDQARSPGLRW*QILYICARSCS
Trigger: GGAGCAGCTTCTAGCACATATGTAGAGTATCTGGCACCACCTTAGCCCAGGGCTGCGTGCCTGATCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 72 bp GTGATGCATCCTGTCTCATGCTGGGTCATCATGTCCTaGAGGCCACTCTGCACCCGCCTGATTCTGAGTGAC +
Preference number: 3 (lower is better)
Translates to: VMHPVSCWVIMS*RPLCTRLILSD
Trigger: GTCACTCAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCAGCATGAGACAGGATGCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
3UTR GCA 72 bp GGTAAGCAGATTCAGAGTCATGGTCCCCGAATGCAATaGAAAGGCCTGCTGGCTGGGTGTCAATGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: GKQIQSHGPRMQ*KGLLAGCQCWL
Trigger: GAGCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACCATGACTCTGAATCTGCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 72 bp CCTCTAATGGGGAAGGTACCCATGGCTTCTCTCCGATaGACACTCGAGGCAGCATGGTCTACTGAGACTAGG +
Preference number: 3 (lower is better)
Translates to: PLMGKVPMASLR*TLEAAWSTETR
Trigger: CCTAGTCTCAGTAGACCATGCTGCCTCGAGTGTGCATCGGAGAGAAGCCATGGGTACCTTCCCCATTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 72 bp AAGCAGCCTGAGGCCTGCACCAGGTGCAGATGTTGGTaGCATGCTTCTTGTACAGCCTCATCAGATTCCAGC +
Preference number: 3 (lower is better)
Translates to: KQPEACTRCRCW*HASCTASSDSS
Trigger: GCTGGAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAGGCCTCAGGCTGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR CCA 72 bp ATCCCCACTGATCAGGCACGCAGCCCTGGGCTAAGGTaGTGCCAGATACTCTACATATGTGCTAGAAGCTGC +
Preference number: 3 (lower is better)
Translates to: IPTDQARSPGLR*CQILYICARSC
Trigger: GCAGCTTCTAGCACATATGTAGAGTATCTGGCACCACCTTAGCCCAGGGCTGCGTGCCTGATCAGTGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 72 bp TGGAAGCAGCCTGAGGCCTGCACCAGGTGCAGATGTTaGTGCCATGCTTCTTGTACAGCCTCATCAGATTCC +
Preference number: 3 (lower is better)
Translates to: WKQPEACTRCRC*CHASCTASSDS
Trigger: GGAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAGGCCTCAGGCTGCTTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR TCA 72 bp AGAGTGCTACCTCTCCAAGAGACCACAGAGTTCACCTaGGGTGACAGGGAGCACCAGCAGCTGTTTAGAATG +
Preference number: 3 (lower is better)
Translates to: RVLPLQETTEFT*GDREHQQLFRM
Trigger: CATTCTAAACAGCTGCTGGTGCTCCCTGTCACCTCAGGTGAACTCTGTGGTCTCTTGGAGAGGTAGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp GTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATaGTGGTTTCTGGAGTTCCGTCTACACCCACATTCC +
Preference number: 3 (lower is better)
Translates to: VWLPSSELPHGP*WFLEFRLHPHS
Trigger: GGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR GCA 72 bp GATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTaGCCCAGATGGTGGGTGTGCATGTCATCAGCTATG +
Preference number: 3 (lower is better)
Translates to: DLDDGTECCTKA*PRWWVCMSSAM
Trigger: CATAGCTGATGACATGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR CCA 72 bp TCATGGTCCCCGAATGCAATGCAAAGGCCTGCTGGCTaGGTGTCAATGCTGGCTCAATTAAGAATGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SWSPNAMQRPAG*VSMLAQLRMLL
Trigger: CAGCAGCATTCTTAATTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCATTCAATGATTCCCCCTaGCCCGTATTTTCAGCTGGA +
Preference number: 3 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCAFNDSP*PVFSAG
Trigger: TCCAGCTGAAAATACGGGCAAGGGGGAATCATTGAA...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR GCA 72 bp CAGAGTTGCGGTGGCAAACCTGAGGTATTTTCAGAGTaGTACCTCTCCAAGAGACCACAGAGTTCACCTGAG +
Preference number: 3 (lower is better)
Translates to: QSCGGKPEVFSE*YLSKRPQSSPE
Trigger: CTCAGGTGAACTCTGTGGTCTCTTGGAGAGGTAGCACTCTGAAAATACCTCAGGTTTGCCACCGCAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 72 bp GGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTaGGTGTGCATGTCATCAGCTATGATAATGGGAAAC +
Preference number: 3 (lower is better)
Translates to: GTECCTKACPRW*VCMSSAMIMGN
Trigger: GTTTCCCATTATCATAGCTGATGACATGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR CCA 72 bp GATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATaGTGGGTGTGCATGTCATCAGCTATGATAATGGGA +
Preference number: 3 (lower is better)
Translates to: DGTECCTKACPR*WVCMSSAMIMG
Trigger: TCCCATTATCATAGCTGATGACATGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR CCA 72 bp AGAGTCATGGTCCCCGAATGCAATGCAAAGGCCTGCTaGCTGGGTGTCAATGCTGGCTCAATTAAGAATGCT +
Preference number: 3 (lower is better)
Translates to: RVMVPECNAKAC*LGVNAGSIKNA
Trigger: AGCATTCTTAATTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACCATGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 72 bp CATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTaGAGTTCCGTCTACACCCACATTCCTACACCTTCC +
Preference number: 3 (lower is better)
Translates to: HPQSCLMVHDGF*SSVYTHIPTPS
Trigger: GGAAGGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CAA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCCTTCGCCTCCCACAATaGCATGGTCATGTGAATGCC +
Preference number: 3 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLLRLPQ*HGHVNA
Trigger: GGCATTCACATGACCATGCAATTGTGGGAGGCGAAG...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 72 bp GAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTaGTTCTTTATCATCAGGGTTTCAGCTCTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: EIWRWAVQDGIG*FFIIRVSALLS
Trigger: AGAAAGAAGAGCTGAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR GCA 72 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTaGTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGC +
Preference number: 3 (lower is better)
Translates to: LLRFGDLDDGTE*CTKACPRWWVC
Trigger: GCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR GCA 72 bp TTCAGAGTCATGGTCCCCGAATGCAATGCAAAGGCCTaGTGGCTGGGTGTCAATGCTGGCTCAATTAAGAAT +
Preference number: 3 (lower is better)
Translates to: FRVMVPECNAKA*WLGVNAGSIKN
Trigger: ATTCTTAATTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACCATGACTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGCTTCGCCTCCCACAATaGCATGGTCATGTGAATGCC +
Preference number: 3 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLLRLPQ*HGHVNA
Trigger: GGCATTCACATGACCATGCAATTGTGGGAGGCGAAG...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp CCTGAGGTGACAGGGAGCACCAGCAGCTGTTTAGAATaGTCACACTGCACAATTCTAACAACCACCTGGTAT +
Preference number: 3 (lower is better)
Translates to: PEVTGSTSSCLE*SHCTILTTTWY
Trigger: ATACCAGGTGGTTGTTAGAATTGTGCAGTGTGATCATTCTAAACAGCTGCTGGTGCTCCCTGTCACCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGCACTCCATATGACTTaGATGCAGAGGCAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAALHMT*MQRQSR
Trigger: CCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp CTCAGCGGTGGTGCTAAGGGACTAACACAGACTTTAAGGTCACAAAACCATTGTTTGGTGCCATGCTTCTaGTACAGCCTCATCAGATTC +
Preference number: 3 (lower is better)
Translates to: LSGGAKGLTQTLRSQNHCLVPCF*YSLIRF
Trigger: GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAA...ACAATGGTTTTGTGACCTTAAAGTCTGTGTTAGTCCCTTAGCACCACCGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CAA 90 bp GAAAGAGCACAGCTCCGATATGTGACACAATGGAAACATTTGGGCATTAGAAAGCACCAGGTGCAGATGTaGGTGCCATGCTTCTTGTAC +
Preference number: 3 (lower is better)
Translates to: ERAQLRYVTQWKHLGIRKHQVQM*VPCFLY
Trigger: GTACAAGAAGCATGGCACCAACATCTGCACCTGGTG...CTTTCTAATGCCCAAATGTTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR TCA 72 bp TCCTTTTGTGTGTATTCAGAGTTGCGGTGGCAAACCTaGGGTATTTTCAGAGTGCTACCTCTCCAAGAGACC +
Preference number: 3 (lower is better)
Translates to: SFCVYSELRWQT*GIFRVLPLQET
Trigger: GGTCTCTTGGAGAGGTAGCACTCTGAAAATACCTCAGGTTTGCCACCGCAACTCTGAATACACACAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CCA 72 bp TGGGTGTGCATGTCATCAGCTATGATAATGGGAAACTaGCTGATGGAAAGAGCACAGCTCCGATATGTGACA +
Preference number: 3 (lower is better)
Translates to: WVCMSSAMIMGN*LMERAQLRYVT
Trigger: TGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCATTATCATAGCTGATGACATGCACACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CAA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAGCACTCCATATGACTTaGATGCAGAGGCAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLALHMT*MQRQSR
Trigger: CCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGC...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGTTGTCCCAGAAGTCTaGGAGGGCTATGGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAVVPEV*EGYGEK
Trigger: TTTCTCTCCATAGCCCTCCAAGACTTCTGGGACAAC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp GAAAGAGCACAGCTCCGATATGTGACACAATGGAAACATTTGGGCATTAGAAAGACCTTCCTTCCTCTCTaGCCATGTGATCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: ERAQLRYVTQWKHLGIRKTFLPL*PCDLST
Trigger: TGTGGAGAGATCACATGGCAAGAGAGGAAGGAAGGT...CTTTCTAATGCCCAAATGTTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR CCA 72 bp AGTTTCTCTTTGTTTCACATGAATGAGATCTGGAGGTaGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATC +
Preference number: 3 (lower is better)
Translates to: SFSLFHMNEIWR*AVQDGIGCFFI
Trigger: GATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAAAGAGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CAA 90 bp CATGATGGTTTCTGGAGTTCCGTCTACACCCACATTCCTACACCTTCCTTCCTCCTGTCTCTATTATATTaGCTGAAACTTACTAGGACC +
Preference number: 3 (lower is better)
Translates to: HDGFWSSVYTHIPTPSFLLSLLY*LKLTRT
Trigger: GGTCCTAGTAAGTTTCAGCAAATATAATAGAGACAG...GAGGAAGGAAGGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
3UTR-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTACAGCAGCTTATCATTaGGTTTCCAGTAGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEATAAYH*VSSRPA
Trigger: AGCAGGCCTACTGGAAACCAAATGATAAGCTGCTGT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp TTGTTTCCCGTCACAGAATCTTGTGGAAAGGAAGTTTaGGGTCCCTTGGTGACTTGCTTTTTCTGCCTGAAT +
Preference number: 3 (lower is better)
Translates to: LFPVTESCGKEV*GPLVTCFFCLN
Trigger: ATTCAGGCAGAAAAAGCAAGTCACCAAGGGACCTCAAACTTCCTTTCCACAAGATTCTGTGACGGGAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR TCA 72 bp TCTTTAGGCCAAAATAAGGCCTGGGAATCTGCTGTTTaGACAAGCACTCCATATGACTTTGATGCAGAGGCA +
Preference number: 3 (lower is better)
Translates to: SLGQNKAWESAV*TSTPYDFDAEA
Trigger: TGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAACAGCAGATTCCCAGGCCTTATTTTGGCCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTATTGCTGATTTTCAGCTaGGGTTTGGGTGGCCCATTA +
Preference number: 3 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLLLIFS*GLGGPL
Trigger: TAATGGGCCACCCAAACCCAAGCTGAAAATCAGCAA...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATTGCTGATTTTCAGCTaGGGTTTGGGTGGCCCATTA +
Preference number: 3 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLLLIFS*GLGGPL
Trigger: TAATGGGCCACCCAAACCCAAGCTGAAAATCAGCAA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGTAAATGGTAGGCAGTaGGGAGGTGTCATCTCAAAT +
Preference number: 3 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAVNGRQ*GGVISN
Trigger: ATTTGAGATGACACCTCCCAACTGCCTACCATTTAC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp AGGTCCCTTGGTGACTTGCTTTTTCTGCCTGAATGGTaGGGAATTCTTTCTTCATTCTTGAAGTTCAGGATC +
Preference number: 3 (lower is better)
Translates to: RSLGDLLFLPEW*GILSSFLKFRI
Trigger: GATCCTGAACTTCAAGAATGAAGAAAGAATTCCTCACCATTCAGGCAGAAAAAGCAAGTCACCAAGGGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR TCA 72 bp TTCTGGAACTCCCTTCAGAGCTACATCAAGAGCCAATaGGAAGACCATCTTCTCCTCATAGTTACAATTTGG +
Preference number: 3 (lower is better)
Translates to: FWNSLQSYIKSQ*EDHLLLIVTIW
Trigger: CCAAATTGTAACTATGAGGAGAAGATGGTCTTCTCATTGGCTCTTGATGTAGCTCTGAAGGGAGTTCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAACTGTCTCTATTATATTaGCTGAAACTTACTAGGACC +
Preference number: 3 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKLSLLY*LKLTRT
Trigger: GGTCCTAGTAAGTTTCAGCAAATATAATAGAGACAG...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CAA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCAGTCCAGGTCACACTaGGAAATTATCTGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: SGREITHTHLGKIQNNQHQSRSH*EIIWLL
Trigger: GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp GAAGCTGCTGTGATTCTATGGCAGCCTTATCTCTTATaGCACGTCCATTTACTAAGATTTGGTGATCTGGAT +
Preference number: 3 (lower is better)
Translates to: EAAVILWQPYLL*HVHLLRFGDLD
Trigger: ATCCAGATCACCAAATCTTAGTAAATGGACGTGTCATAAGAGATAAGGCTGCCATAGAATCACAGCAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGTGATTAAACCGAGATaGATTGGTAAGCAGATTCAG +
Preference number: 3 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAVIKPR*IGKQIQ
Trigger: CTGAATCTGCTTACCAATCAATCTCGGTTTAATCAC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGACTGTCCCAAAGCTTTaGAGATTGATAAACAGCTGC +
Preference number: 3 (lower is better)
Translates to: PAIIFILIREGDLYSLLMTVPKL*RLINSC
Trigger: GCAGCTGTTTATCAATCTCAAAAGCTTTGGGACAGT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTAATCCTAAAAATGCTTaGAGCGATGAGAACAAAGTG +
Preference number: 3 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEANPKNA*SDENKV
Trigger: CACTTTGTTCTCATCGCTCAAAGCATTTTTAGGATT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp GCCTTCTACTCTGATTATGATGCTCATTCAAAATGCTaGGAGACAAGAACAGGTAACATTAACACTGCACGT +
Preference number: 3 (lower is better)
Translates to: AFYSDYDAHSKC*ETRTGNINTAR
Trigger: ACGTGCAGTGTTAATGTTACCTGTTCTTGTCTCTCAGCATTTTGAATGAGCATCATAATCAGAGTAGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGGTAAATGGTAGGCAGTaGGGAGGTGTCATCTCAAAT +
Preference number: 3 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVVNGRQ*GGVISN
Trigger: ATTTGAGATGACACCTCCCAACTGCCTACCATTTAC...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp ATTCATTTGAACACTTCAATATTCTGTCTTCTTCAATaGTTCCCCCTTGCCCGTATTTTCAGCTGGAACAGT +
Preference number: 3 (lower is better)
Translates to: IHLNTSIFCLLQ*FPLARIFSWNS
Trigger: ACTGTTCCAGCTGAAAATACGGGCAAGGGGGAATCATTGAAGAAGACAGAATATTGAAGTGTTCAAATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
3UTR-3UTR CAA 90 bp TATCTATACTGTGACTATAATTTCCAGTTTGACCTTGGTTCACCACCAGCTTTTCCAGCTCATCCATCATaGAGTTATTTGGTTCATCTT +
Preference number: 3 (lower is better)
Translates to: YLYCDYNFQFDLGSPPAFPAHPS*SYLVHL
Trigger: AAGATGAACCAAATAACTCAATGATGGATGAGCTGG...AAAAGCTGGTGGTGAACCAAGGTCAAACTGGAAATTATAGTCACAGTATAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCCTCATTGCCCTCTTCTaGGAAAGTGATTACACATCA +
Preference number: 3 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLLIALF*ESDYTS
Trigger: TGATGTGTAATCACTTTCCAAGAAGAGGGCAATGAG...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR TCA 72 bp ATGGTTTCCTTAAGAAGGCACTCAGGTATTATGTTCTaGGTTCTTACCTGCTTAAGAGAACTTGACATTAGA +
Preference number: 3 (lower is better)
Translates to: MVSLRRHSGIMF*VLTCLRELDIR
Trigger: TCTAATGTCAAGTTCTCTTAAGCAGGTAAGAACTCAGAACATAATACCTGAGTGCCTTCTTAAGGAAACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258679.11
3UTR CCA 72 bp AATACAAATCTAAACATGAAACTGTCGCTCATCGGTTaGTCCCAAGAGGCTCCAACATATTATATTCTAAGT +
Preference number: 3 (lower is better)
Translates to: NTNLNMKLSLIG*SQEAPTYYILS
Trigger: ACTTAGAATATAATATGTTGGAGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGTGATTAAACCGAGATaGATTGGTAAGCAGATTCAG +
Preference number: 3 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSVIKPR*IGKQIQ
Trigger: CTGAATCTGCTTACCAATCAATCTCGGTTTAATCAC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCTCCCAGCAAATTAAGTaGTGTACATCTAGTCACTAC +
Preference number: 3 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSSQQIK*CTSSHY
Trigger: GTAGTGACTAGATGTACACAACTTAATTTGCTGGGA...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCTCCCAGCAAATTAAGTaGTGTACATCTAGTCACTAC +
Preference number: 3 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLSQQIK*CTSSHY
Trigger: GTAGTGACTAGATGTACACAACTTAATTTGCTGGGA...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR GCA 72 bp CATTTTTCACCAGCATTAGCTATAAGGAATCTGACTTaGTTTCAAAAGTCAAGAGACTTGCCATCATTGAAA +
Preference number: 3 (lower is better)
Translates to: HFSPALAIRNLT*FQKSRDLPSLK
Trigger: TTTCAATGATGGCAAGTCTCTTGACTTTTGAAAGCAAGTCAGATTCCTTATAGCTAATGCTGGTGAAAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CTCTCCAGGAGGCATCTCGGGGCTTGCTGGGCATCCTGGCCCAGGAGAGGCATTGGTCCGGGCCCTACGTaGGTCGGAGGGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: LSRRHLGACWASWPRRGIGPGPT*VGGAAE
Trigger: TTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGACC...AATGCCTCTCCTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR TCA 90 bp GATGCATCCTGTCTCATGCTGGGTCATCATGTCCTGCAGGCCACTCTGCACCCGCCACGGCGCACCACCTaGACCCTCGACTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: DASCLMLGHHVLQATLHPPRRTT*TLDSPG
Trigger: GCCCGGCGAGTCGAGGGTTCAGGTGGTGCGCCGTGG...CGGGTGCAGAGTGGCCTGCAGGACATGATGACCCAGCATGAGACAGGATGCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR GCA 90 bp TACTCTCACATACTTCCTTCTCTCCAGGAGGCATCTCGGGGCTTGCTGGGCATCGTGCGGCGAACGAGCTaGCGGTCGCAGGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: YSHILPSLQEASRGLLGIVRRTS*RSQAAP
Trigger: TGGCGCCGCCTGCGACCGGCAGCTCGTTCGCCGCAC...GATGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR TCA 90 bp ATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTAGCCCAGCCAGCCGGTaGACCCGTGGGGCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: IWRWAVQDGIGCFFIIRVSPASR*TRGAKP
Trigger: CGGCTTCGCCCCACGGGTTCACCGGCTGGCTGGGCT...AACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp CTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATCAGATTCGTGCGGCGAACGAGCTaGCGGTCGCAGGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LHQVQMLVPCFLYSLIRFVRRTS*RSQAAP
Trigger: TGGCGCCGCCTGCGACCGGCAGCTCGTTCGCCGCAC...GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp CCGTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTCAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: PSLVCGFHPQSCLMVHDGQPVNP*GEAGTL
Trigger: CAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTG...ACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp ATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTGGTCCGGGCCCTACGTaGGTCGGAGGGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: IWRWAVQDGIGCFFIIRVGPGPT*VGGAAE
Trigger: TTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGACC...AACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR CAA 72 bp GATCTCTCCACACAGGCTCCCCTTCTGTCTTCCACCTaGAGTGGAAGCAGCCTGAGGCCTGCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: DLSTQAPLLSST*SGSSLRPAPGA
Trigger: TGCACCTGGTGCAGGCCTCAGGCTGCTTCCACTCAAGGTGGAAGACAGAAGGGGAGCCTGTGTGGAGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp TACTCAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGCCACGGCGCACCACCTaGACCCTCGACTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: YSELRKYSPIVSRHRILWPRRTT*TLDSPG
Trigger: GCCCGGCGAGTCGAGGGTTCAGGTGGTGCGCCGTGG...CCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp CTCAGCGGTGGTGCTAAGGGACTAACACAGACTTTAAGGTCACAAAACCATTGTAGCCCAGCCAGCCGGTaGACCCGTGGGGCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LSGGAKGLTQTLRSQNHCSPASR*TRGAKP
Trigger: CGGCTTCGCCCCACGGGTTCACCGGCTGGCTGGGCT...ACAATGGTTTTGTGACCTTAAAGTCTGTGTTAGTCCCTTAGCACCACCGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp CGTCACCCAGATGTGATGCATCCTGTCTCATGCTGGGTCATCATGTCCTGCAGGTGGGTCATCATGTCCTaGAGGCCACTCTGCACCCGC +
Preference number: 4 (lower is better)
Translates to: RHPDVMHPVSCWVIMSCRWVIMS*RPLCTR
Trigger: GCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCA...CCTGCAGGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR GCA 90 bp CTCCAGGAGGCATCTCGGGGCTTGCTGGGCATCCTGGCCCAGGAGAGGCATTTAATGCATCCTGTCTCATaGTGGGTCATCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQEASRGLLGILAQERHLMHPVS*WVIMSC
Trigger: GCAGGACATGATGACCCAGCATGAGACAGGATGCAT...TAAATGCCTCTCCTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CCA 90 bp AGTTTCTCTTTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGACAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: SFSLFHMNEIWRWAVQDGQPVNP*GEAGTL
Trigger: CAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTG...TCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAAAGAGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
3UTR CAA 72 bp CACATACTTCCTTCTCTCCAGGAGGCATCTCGGGGCTaGCTGGGCATCCTGGCCCAGGAGAGGCATTTAGTC +
Preference number: 4 (lower is better)
Translates to: HILPSLQEASRG*LGILAQERHLV
Trigger: GACTAAATGCCTCTCCTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAGAAGGAAGTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CCA 90 bp ACTCAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAGGTCCGGGCCCTACGTaGGTCGGAGGGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: TQNFGNTPPLFPVTESCGGPGPT*VGGAAE
Trigger: TTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGACC...TCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp CCGTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTAGCCCTCCTATCAGCTaGGTGGGCAGGAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: PSLVCGFHPQSCLMVHDGSPPIS*VGRKRT
Trigger: GGTCCTTTTCCTGCCCACTCAGCTGATAGGAGGGCT...ACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGTGCGGCGAACGAGCTaGCGGTCGCAGGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAVRRTS*RSQAAP
Trigger: TGGCGCCGCCTGCGACCGGCAGCTCGTTCGCCGCAC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449726.6
CDS-3UTR CCA 90 bp CCAAGAGCATTACACCAGATCTCCTACGAAGATGTGGGATTTCCTCTAGGAAAAGGTCCGGGCCCTACGTaGGTCGGAGGGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: PRALHQISYEDVGFPLGKGPGPT*VGGAAE
Trigger: TTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGACC...TTTTCCTAGAGGAAATCCCACATCTTCGTAGGAGATCTGGTGTAATGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp AAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGGAAGTTTGAGGCAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: KYSPIVSRHRILWKGSLRQPVNP*GEAGTL
Trigger: CAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTG...CCTCAAACTTCCTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CCA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LLRFGDLDDGTECCTKACQPVNP*GEAGTL
Trigger: CAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTG...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp TCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCAGCCTTCGGCTGGCTaGAGTTCACAACAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGGGQCRTELAASLSSGFQPSAG*SSQQQP
Trigger: GGGCTGCTGTTGTGAACTCCAGCCAGCCGAAGGCTG...AAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp CTCCAGGAGGCATCTCGGGGCTTGCTGGGCATCCTGGCCCAGGAGAGGCATTTAATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LQEASRGLLGILAQERHLIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...TAAATGCCTCTCCTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR GCA 90 bp AGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTGCTGTACTAAAGCCTaGCCCAGATGGTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RSGGGQCRTELAASLSSGCCTKA*PRWWVC
Trigger: GCACACCCACCATCTGGGGCAGGCTTTAGTACAGCA...CCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCAAGGAACCATCGAGGCTaGCAACCTGTAGTCCTAGGT +
Preference number: 4 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCARNHRG*QPVVLG
Trigger: ACCTAGGACTACAGGTTGGCAGCCTCGATGGTTCCT...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGGTCCGGGCCCTACGTaGGTCGGAGGGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAGPGPT*VGGAAE
Trigger: TTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGACC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449726.6
CDS-3UTR CCA 90 bp CTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATCAGATTCGCCTGCCCCAGATGGTaGGTGTGCATGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: LHQVQMLVPCFLYSLIRFACPRW*VCMSSA
Trigger: AGCTGATGACATGCACACCCACCATCTGGGGCAGGC...GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp GAGGCGTCACCCAGATGTGATGCATCCTGTCTCATGCTGGGTCATCATGTCCTGCATCCTGTCTCATGCTaGGTCATCATGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EASPRCDASCLMLGHHVLHPVSC*VIMSCR
Trigger: CCTGCAGGACATGATGACCCAGCATGAGACAGGATG...CAGGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CCA 90 bp GAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGCAAGCAGCCTTCGGCTaGCTGGAGTTCACAACAGCA +
Preference number: 4 (lower is better)
Translates to: EIWRWAVQDGIGCFFIIRQAAFG*LEFTTA
Trigger: TGCTGTTGTGAACTCCAGCCAGCCGAAGGCTGCTTG...CCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp TCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTGAGTGTGTGAGAGAGTaGGATGGGGGAGGGATGCAA +
Preference number: 4 (lower is better)
Translates to: SGGGQCRTELAASLSSGFECVRE*DGGGMQ
Trigger: TTGCATCCCTCCCCCATCTCACTCTCTCACACACTC...AAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp CTGAGGCCTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATAGCCAGAAGCTGCTGTaGTTCTATGGCAGCCTTATC +
Preference number: 4 (lower is better)
Translates to: LRPAPGADVGAMLLVQPHSQKLL*FYGSLI
Trigger: GATAAGGCTGCCATAGAATCACAGCAGCTTCTGGCT...ATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAGGCCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp AGATCTCACTTAACTCAGGATACTCTCACATACTTCCTTCTCTCCAGGAGGCATCCGCCTGATTCTGAGTaGCAGCCCTCCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: RSHLTQDTLTYFLLSRRHPPDSE*QPSWAT
Trigger: GGTGGCCCAGGAGGGCTGTCACTCAGAATCAGGCGG...ATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTATCCTGAGTTAAGTGAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR TCA 90 bp TCCTTCTCTCCAGGAGGCATCTCGGGGCTTGCTGGGCATCCTGGCCCAGGAGAGAGACCTCATTCTATCTaGTGGCAGAAAAACAATCAA +
Preference number: 4 (lower is better)
Translates to: SFSPGGISGLAGHPGPGERPHSI*WQKNNQ
Trigger: TTGATTGTTTTTCTGCCATCAGATAGAATGAGGTCT...CTCTCCTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR TCA 90 bp TTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTCCTCTCTTGCCATGTaGTCTCTCCACACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFHMNEIWRWAVQDGIGCSSLAM*SLHTGS
Trigger: GGAGCCTGTGTGGAGAGATCACATGGCAAGAGAGGA...GCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR GCA 90 bp CAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGCCGAAGCCTCCAAAGTaGGGCGAACGAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: QNFGNTPPLFPVTESCGKPKPPK*GERAAG
Trigger: ACCGGCAGCTCGTTCGCCGCACTTTGGAGGCTTCGG...CTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR GCA 90 bp CAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCCACATTGAGGCCTGCACCAGGTaGAGATGTTGGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: QSCLMVHDGFWSSVYTHIEACTR*RCWCHA
Trigger: AGCATGGCACCAACATCTGCACCTGGTGCAGGCCTC...AATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp CAGGGTTTTCTCAGGCATTTTAGATCTCACTTAACTCAGGATACTCTCACATACCAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: QGFLRHFRSHLTQDTLTYQPVNP*GEAGTL
Trigger: CAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTG...GTATGTGAGAGTATCCTGAGTTAAGTGAGATCTAAAATGCCTGAGAAAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR TCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCAGAGTTCACCTGAGGTaGCAGGGAGCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLRVHLR*QGAPAA
Trigger: AGCTGCTGGTGCTCCCTGTCACCTCAGGTGAACTCT...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TCATCTTTCCTATCAAATGGTTTCCTTAAGAAGGCACTCAGGTATTATGTTCTGGTGCGGCGAACGAGCTaGCGGTCGCAGGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SSFLSNGFLKKALRYYVLVRRTS*RSQAAP
Trigger: TGGCGCCGCCTGCGACCGGCAGCTCGTTCGCCGCAC...CAGAACATAATACCTGAGTGCCTTCTTAAGGAAACCATTTGATAGGAAAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR GCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGGTCCCCGAATGCAATaGAAAGGCCTGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLGPRMQ*KGLLAG
Trigger: CCCAGCCAGCAGGCCTTTGCATTGCATTCGGGGACC...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCGACAGAGTAAGACTCTaGTGGAGAGGCACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HPQSCLMVHDGFWSSVYTDRVRL*WRGTSS
Trigger: GCTGCTTGTGCCTCTCCAGCAGAGTCTTACTCTGTC...GGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp GGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCAATGAGATCTGGAGGTaGGCAGTGCAGGACGGAATT +
Preference number: 4 (lower is better)
Translates to: GFHPQSCLMVHDGFWSSVNEIWR*AVQDGI
Trigger: AATTCCGTCCTGCACTGCCCACCTCCAGATCTCATT...GACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396257.6
ENST00000649443.1
CDS-3UTR CCA 90 bp TCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTAAAGCCTGCCCCAGATaGTGGGTGTGCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: SGGGQCRTELAASLSSGFKACPR*WVCMSS
Trigger: TGATGACATGCACACCCACCATCTGGGGCAGGCTTT...AAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCAATAAAGTGTCCAGTATaGCCAGCTGCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCAIKCPV*PAASPW
Trigger: CCATGGAGAAGCAGCTGGCCATACTGGACACTTTAT...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp CCGTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTAGAGTAAGACTCTGCTaGAGAGGCACAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSLVCGFHPQSCLMVHDGRVRLC*RGTSSL
Trigger: AAGGCTGCTTGTGCCTCTCCAGCAGAGTCTTACTCT...ACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGACGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp TTTCTACCAGCTCATCCATCATTGAGTTATTTGGTTCATCTTTCCTATCAAATGAGCCCAGCCAGCCGGTaGACCCGTGGGGCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: FLPAHPSLSYLVHLSYQMSPASR*TRGAKP
Trigger: CGGCTTCGCCCCACGGGTTCACCGGCTGGCTGGGCT...CATTTGATAGGAAAGATGAACCAAATAACTCAATGATGGATGAGCTGGTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCACACAGCTCCGATATGTaGCACAATGGAAACATTTGG +
Preference number: 4 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCAHSSDM*HNGNIW
Trigger: CCAAATGTTTCCATTGTGTCACATATCGGAGCTGTG...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp CTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCTTCCATCCTCAGAGTTaGCTCATGGTCCATGATGGT +
Preference number: 4 (lower is better)
Translates to: LEVGSAGRNWLLLYHQGFFHPQS*LMVHDG
Trigger: ACCATCATGGACCATGAGGCAACTCTGAGGATGGAA...GAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp AGTTTCTCTTTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGATGCTGTACTAAAGCCTaGCCCAGATGGTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SFSLFHMNEIWRWAVQDGCCTKA*PRWWVC
Trigger: GCACACCCACCATCTGGGGCAGGCTTTAGTACAGCA...TCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAAAGAGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp GAGAGAGGTCCCAAGAGCATTACACCAGATCTCCTACGAAGATGTGGGATTTCCGATGATGGCACAGAGTaGTGTACTAAAGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ERGPKSITPDLLRRCGISDDGTE*CTKACP
Trigger: GGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATC...GGAAATCCCACATCTTCGTAGGAGATCTGGTGTAATGCTCTTGGGACCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp TCTCACTTAACTCAGGATACTCTCACATACTTCCTTCTCTCCAGGAGGCATCTCTCCTGCAGGCCACTCTaGACCCGCCTGATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SHLTQDTLTYFLLSRRHLSCRPL*TRLILS
Trigger: ACTCAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGA...GAGATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTATCCTGAGTTAAGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CCA 90 bp TTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCAATGAGATCTGGAGGTaGGCAGTGCAGGACGGAATT +
Preference number: 4 (lower is better)
Translates to: LFHMNEIWRWAVQDGIGCNEIWR*AVQDGI
Trigger: AATTCCGTCCTGCACTGCCCACCTCCAGATCTCATT...GCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAAGCCTGCCCCAGATGGTaGGTGTGCATGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKACPRW*VCMSSA
Trigger: AGCTGATGACATGCACACCCACCATCTGGGGCAGGC...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCTGGGGAAGGTACCCATaGCTTCTCTCCGATGCACAC +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLWGRYP*LLSDAH
Trigger: GTGTGCATCGGAGAGAAGCCATGGGTACCTTCCCCA...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCCTCCTATCAGCTGAGTaGGCAGGAAAAGGACCTAAA +
Preference number: 4 (lower is better)
Translates to: LEVGSAGRNWLLLYHQGFLLSAE*AGKGPK
Trigger: TTTAGGTCCTTTTCCTGCCCACTCAGCTGATAGGAG...GAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp CTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCTTTGTTTCACATGAATaGGATCTGGAGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LEVGSAGRNWLLLYHQGFFVSHE*DLEVGS
Trigger: ACTGCCCACCTCCAGATCTCATTCATGTGAAACAAA...GAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp CTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCTCTCTTTGTTTCACATaGATGAGATCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LEVGSAGRNWLLLYHQGFSLCFT*MRSGGG
Trigger: CCCACCTCCAGATCTCATTCATGTGAAACAAAGAGA...GAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp AGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGCACAGCTCCGATATGTaGCACAATGGAAACATTTGG +
Preference number: 4 (lower is better)
Translates to: RSGGGQCRTELAASLSSGHSSDM*HNGNIW
Trigger: CCAAATGTTTCCATTGTGTCACATATCGGAGCTGTG...CCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp TGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCAGCTCTTAGCCAGAAGCTGCTGTaGTTCTATGGCAGCCTTATC +
Preference number: 4 (lower is better)
Translates to: WAVQDGIGCFFIIRVSALSQKLL*FYGSLI
Trigger: GATAAGGCTGCCATAGAATCACAGCAGCTTCTGGCT...AAGAGCTGAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGATGCCCTGGAGTGCCTaGATGCAGCAGTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLMPWSA*MQQCNE
Trigger: CTCATTGCACTGCTGCATTCAGGCACTCCAGGGCAT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCGGCAGGAGAATTGCTTaGACTCGGGAGGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: LLRFGDLDDGTECCTKACGRRIA*TREAEI
Trigger: GATCTCCGCCTCCCGAGTTCAAGCAATTCTCCTGCC...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR GCA 90 bp CATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCTTCCATCCTCAGAGTTaGCTCATGGTCCATGATGGT +
Preference number: 4 (lower is better)
Translates to: HPQSCLMVHDGFWSSVYTFHPQS*LMVHDG
Trigger: ACCATCATGGACCATGAGGCAACTCTGAGGATGGAA...GGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396257.6
ENST00000649443.1
CDS-3UTR GCA 90 bp TGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCCCCAGATGGTGGGTGTGCATTCAGCTCTTCTTTCTaGTTTACCGTCCTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: WMMAQSAVLKPAPDGGCAFSSSF*FTVLSV
Trigger: CACACTAAGGACGGTAAAGCAGAAAGAAGAGCTGAA...TGCACACCCACCATCTGGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp TTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCCCCAGATGGTGGGTGTaGATGTCATCAGCTATGATA +
Preference number: 4 (lower is better)
Translates to: LFHMNEIWRWAVQDGIGCPRWWV*MSSAMI
Trigger: TATCATAGCTGATGACATGCACACCCACCATCTGGG...GCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGGATGATGGCACAGAGTaGTGTACTAAAGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQDDGTE*CTKACP
Trigger: GGGGCAGGCTTTAGTACAGCACTCTGTGCCATCATC...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCTGCAATGCAAAGGCCTaGTGGCTGGGTGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLCNAKA*WLGVNA
Trigger: AGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCA...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CCAAGAGCATTACACCAGATCTCCTACGAAGATGTGGGATTTCCTCTAGGAAAAAAGCAGCCTGAGGCCTaGACCAGGTGCAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: PRALHQISYEDVGFPLGKKQPEA*TRCRCW
Trigger: CCAACATCTGCACCTGGTGCAGGCCTCAGGCTGCTT...TTTTCCTAGAGGAAATCCCACATCTTCGTAGGAGATCTGGTGTAATGCTCTTGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCCAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLQPVNP*GEAGTL
Trigger: CAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTG...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449726.6
CDS-3UTR TCA 90 bp AGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RSGGGQCRTELAASLSSGIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...CCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp GAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: EIWRWAVQDGIGCFFIIRIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...CCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp CTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATCAGATTCTTTGTTTCACATGAATaGGATCTGGAGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LHQVQMLVPCFLYSLIRFFVSHE*DLEVGS
Trigger: ACTGCCCACCTCCAGATCTCATTCATGTGAAACAAA...GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGGGGTTGGAGAGGGTTaGGGCTGTTGCTGGAAATTA +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLGVGEG*GCCWKL
Trigger: TAATTTCCAGCAACAGCCTCAACCCTCTCCAACCCC...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGGAACAGAATCCCCACTaGTCAGGCACGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMEQNPH*SGTQPW
Trigger: CCAGGGCTGCGTGCCTGATCAGTGGGGATTCTGTTC...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp GAGAGAGGTCCCAAGAGCATTACACCAGATCTCCTACGAAGATGTGGGATTTCCTTCCATCCTCAGAGTTaGCTCATGGTCCATGATGGT +
Preference number: 4 (lower is better)
Translates to: ERGPKSITPDLLRRCGISFHPQS*LMVHDG
Trigger: ACCATCATGGACCATGAGGCAACTCTGAGGATGGAA...GGAAATCCCACATCTTCGTAGGAGATCTGGTGTAATGCTCTTGGGACCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp CAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCCACATTCCCAGATGGTGGGTGTaGATGTCATCAGCTATGATA +
Preference number: 4 (lower is better)
Translates to: QSCLMVHDGFWSSVYTHIPRWWV*MSSAMI
Trigger: TATCATAGCTGATGACATGCACACCCACCATCTGGG...AATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR GCA 90 bp TTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTCAATGATTCCCCCTTaGCCGTATTTTCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LFHMNEIWRWAVQDGIGCSMIPP*PYFQLE
Trigger: TTCCAGCTGAAAATACGGGCAAGGGGGAATCATTGA...GCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGCCTTCCTTCCTCTCTTaGCATGTGATCTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQPSFLS*HVISPH
Trigger: GTGTGGAGAGATCACATGGCAAGAGAGGAAGGAAGG...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp TGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCAGCTCTTCTCAGAGTTGCCTCATaGTCCATGATGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WAVQDGIGCFFIIRVSALLRVAS*SMMVSG
Trigger: TCCAGAAACCATCATGGACCATGAGGCAACTCTGAG...AAGAGCTGAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp CCGTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTATGATAATGGGAAACTaGCTGATGGAAAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: PSLVCGFHPQSCLMVHDGMIMGN*LMERAQ
Trigger: CTGTGCTCTTTCCATCAGCCAGTTTCCCATTATCAT...ACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp AGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGGCCCGTATTTTCAGCTaGAACAGTTTCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RSGGGQCRTELAASLSSGARIFS*NSFSFS
Trigger: GGAAAATGAGAAACTGTTCCAGCTGAAAATACGGGC...CCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp GAGAGGCGTCACCCAGATGTGATGCATCCTGTCTCATGCTGGGTCATCATGTCCTTATTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: ERRHPDVMHPVSCWVIMSLFRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAATAA...GGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCAGCCCTGGGCTAAGGTaGTGCCAGATACTCTACATA +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLSPGLR*CQILYI
Trigger: TATGTAGAGTATCTGGCACCACCTTAGCCCAGGGCT...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGTCAGGCACGCAGCCCTaGGCTAAGGTGGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMSGTQP*AKVVPD
Trigger: ATCTGGCACCACCTTAGCCCAGGGCTGCGTGCCTGA...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCGGGGGAGGGATGCAATaGATAAACAAGTTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: LEVGSAGRNWLLLYHQGFGGGMQ*INKFLK
Trigger: TTTTAGAAACTTGTTTATTCATTGCATCCCTCCCCC...GAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGTGAAGAGGGTCCACTaGAGAACATCTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLVKRVH*RTSRNS
Trigger: GCTGTTCCTAGATGTTCTTCAGTGGACCCTCTTCAC...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGCTGACAGAGTTGCAGTaGAGAGGGTCCACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLLTELQ*RGSTEE
Trigger: TTCTTCAGTGGACCCTCTTCACTGCAACTCTGTCAG...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGAGGTGTCATCTCAAATaGCCTGTCCCACCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLRCHLK*PVPPLS
Trigger: TGAGAGAGGTGGGACAGGTCATTTGAGATGACACCT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAGAGTTCACCTGAGGTaGCAGGGAGCACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLRVHLR*QGAPAA
Trigger: AGCTGCTGGTGCTCCCTGTCACCTCAGGTGAACTCT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCTTGCGGTGGCAAACCTaGGGTATTTTCAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLLRWQT*GIFRVL
Trigger: TAGCACTCTGAAAATACCTCAGGTTTGCCACCGCAA...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCATCGTCTATTGCTCATaGCCCTCTGACTCTATTGCC +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLIVYCS*PSDSIA
Trigger: GGCAATAGAGTCAGAGGGTCATGAGCAATAGACGAT...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CTCAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCCACATTCAGCTCTTCTTTCTaGTTTACCGTCCTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LRVASWSMMVSGVPSTPTFSSSF*FTVLSV
Trigger: CACACTAAGGACGGTAAAGCAGAAAGAAGAGCTGAA...TGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396257.6
ENST00000649443.1
CDS-3UTR CCA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGCTCAGAGTTGCCTCATaGTCCATGATGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQLRVAS*SMMVSG
Trigger: TCCAGAAACCATCATGGACCATGAGGCAACTCTGAG...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp TTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCGCCCGTATTTTCAGCTaGAACAGTTTCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LFHMNEIWRWAVQDGIGCARIFS*NSFSFS
Trigger: GGAAAATGAGAAACTGTTCCAGCTGAAAATACGGGC...GCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp CCGTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTATTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: PSLVCGFHPQSCLMVHDGLFRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAATAA...ACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396257.6
ENST00000649443.1
CDS-3UTR CCA 90 bp GGTTTTCTCAGGCATTTTAGATCTCACTTAACTCAGGATACTCTCACATACTTCTCCAGGCTGATCCCCTaGAGAGAGGCGTCACCCAGA +
Preference number: 4 (lower is better)
Translates to: GFLRHFRSHLTQDTLTYFSRLIP*REASPR
Trigger: TCTGGGTGACGCCTCTCTCCAGGGGATCAGCCTGGA...GAAGTATGTGAGAGTATCCTGAGTTAAGTGAGATCTAAAATGCCTGAGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CCA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGACCAGGTGCAGATGTTaGTGCCATGCTTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQTRCRC*CHASCT
Trigger: TGTACAAGAAGCATGGCACCAACATCTGCACCTGGT...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGTCTCTTTGTTTCACATaGATGAGATCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQSLCFT*MRSGGG
Trigger: CCCACCTCCAGATCTCATTCATGTGAAACAAAGAGA...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp CTCAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCCACACAGCCTTATCTCTTATaGCACGTCCATTTACTAAGA +
Preference number: 4 (lower is better)
Translates to: LRVASWSMMVSGVPSTPTQPYLL*HVHLLR
Trigger: TCTTAGTAAATGGACGTGTCATAAGAGATAAGGCTG...TGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR TCA 90 bp CCGTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTCTCTATTATATTTGCTaGAACTTACTAGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: PSLVCGFHPQSCLMVHDGLYYIC*NLLGPS
Trigger: ACTGGGTCCTAGTAAGTTTCAGCAAATATAATAGAG...ACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGCAAAATGGCCATGCTaGGCAGCTTTCCTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLAKWPC*AAFLLC
Trigger: ACACAAAAGGAAAGCTGCTCAGCATGGCCATTTTGC...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGTGTACACAGGACTATTaGCTGTCTGAGACAGGATGG +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLCTQDY*LSETGW
Trigger: CCATCCTGTCTCAGACAGTCAATAGTCCTGTGTACA...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTTTCTCTTTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGATCAATGATTCCCCCTTaGCCGTATTTTCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFSLFHMNEIWRWAVQDGSMIPP*PYFQLE
Trigger: TTCCAGCTGAAAATACGGGCAAGGGGGAATCATTGA...TCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAAAGAGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTGCAATGCAAAGGCCTaGTGGCTGGGTGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEACNAKA*WLGVNA
Trigger: AGCATTGACACCCAGCCAGCAGGCCTTTGCATTGCA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAGTCATGGTCCCCGAATaGAATGCAAAGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLVMVPE*NAKACW
Trigger: CCAGCAGGCCTTTGCATTGCATTCGGGGACCATGAC...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCCAGCTGCATTTTGCCTaGTCTGCACTTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLQLHFA*SALLVI
Trigger: AATCACCAAAAGTGCAGAGCAGGCAAAATGCAGCTG...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAATGGCTTCTCTCCGATaGACACTCGAGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLMASLR*TLEAAW
Trigger: CCATGCTGCCTCGAGTGTGCATCGGAGAGAAGCCAT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGCCTGGGCTAAGGTGGTaGCAGATACTCTACATATGT +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLPGLRW*QILYIC
Trigger: ACATATGTAGAGTATCTGGCACCACCTTAGCCCAGG...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCAGGTGCAGATGTTGGTaGCATGCTTCTTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: LLRFGDLDDGTECCTKACRCRCW*HASCTA
Trigger: GGCTGTACAAGAAGCATGGCACCAACATCTGCACCT...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp AGTTTCTCTTTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAACACTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: SFSLFHMNEIWRWAVQDGTLRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAGTGT...TCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAAAGAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396259.5
CDS-3UTR CCA 90 bp GAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGCGATATGTGACACAATaGAAACATTTGGGCATTAGA +
Preference number: 4 (lower is better)
Translates to: EIWRWAVQDGIGCFFIIRRYVTQ*KHLGIR
Trigger: TCTAATGCCCAAATGTTTCCATTGTGTCACATATCG...CCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp GGATTTCCTCTAGGAAAAGGTGTGTATCCAGGTAATTTACTAAGCCAGAAGCTGAAAGCCTGCCCCAGATaGTGGGTGTGCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: GFPLGKGVYPGNLLSQKLKACPR*WVCMSS
Trigger: TGATGACATGCACACCCACCATCTGGGGCAGGCTTT...CAGCTTCTGGCTTAGTAAATTACCTGGATACACACCTTTTCCTAGAGGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp CATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCTTATTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: HPQSCLMVHDGFWSSVYTLFRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAATAA...GGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396257.6
ENST00000649443.1
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACAAAGGCCTGCTGGCTaGGTGTCAATGCTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLQRPAG*VSMLAQ
Trigger: TTGAGCCAGCATTGACACCCAGCCAGCAGGCCTTTG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAACACTCGAGGCAGCATaGTCTACTGAGACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLTLEAA*STETRA
Trigger: GGCCCTAGTCTCAGTAGACCATGCTGCCTCGAGTGT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACTGTCGCTCATCGGTTaGTCCCAAGAGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLLSLIG*SQEAPT
Trigger: TGTTGGAGCCTCTTGGGACCAACCGATGAGCGACAG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCAGCTCTTCAGCCTTATCTCTTATaGCACGTCCATTTACTAAGA +
Preference number: 4 (lower is better)
Translates to: WAVQDGIGCFFIIRVSALQPYLL*HVHLLR
Trigger: TCTTAGTAAATGGACGTGTCATAAGAGATAAGGCTG...AAGAGCTGAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGAACAGAATCCCCACTaGTCAGGCACGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLEQNPH*SGTQPW
Trigger: CCAGGGCTGCGTGCCTGATCAGTGGGGATTCTGTTC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTTCCTCTAGGAAAAGGTGTGTATCCAGGTAATTTACTAAGCCAGAAGCTGCTGAATGAGATCTGGAGGTaGGCAGTGCAGGACGGAATT +
Preference number: 4 (lower is better)
Translates to: FPLGKGVYPGNLLSQKLLNEIWR*AVQDGI
Trigger: AATTCCGTCCTGCACTGCCCACCTCCAGATCTCATT...CAGCAGCTTCTGGCTTAGTAAATTACCTGGATACACACCTTTTCCTAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCTGTGAGAGAGTGAGATaGGGGAGGGATGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: LLRFGDLDDGTECCTKACCERVR*GRDAMN
Trigger: ATTCATTGCATCCCTCCCCCATCTCACTCTCTCACA...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp CTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATCAGATTCCGATATGTGACACAATaGAAACATTTGGGCATTAGA +
Preference number: 4 (lower is better)
Translates to: LHQVQMLVPCFLYSLIRFRYVTQ*KHLGIR
Trigger: TCTAATGCCCAAATGTTTCCATTGTGTCACATATCG...GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCTCAGGCACGCAGCCCTaGGCTAAGGTGGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSSGTQP*AKVVPD
Trigger: ATCTGGCACCACCTTAGCCCAGGGCTGCGTGCCTGA...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGAGACAGGATGGGAATTaGGAACATTTACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLRQDGN*EHLQGR
Trigger: CCTTCCCTGTAAATGTTCCCAATTCCCATCCTGTCT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp GGGAATCTGCTGTTTGAACAAGCACTCCATATGACTTaGATGCAGAGGCAGTCCAGGTCACACTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: GNLLFEQALHMT*MQRQSRSHLEI
Trigger: AATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAACAGCAGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp TTTGCCTGCTCTGCACTTTTGGTGATTAAACCGAGATaGATTGGTAAGCAGATTCAGAGTCATGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: FACSALLVIKPR*IGKQIQSHGPR
Trigger: TCGGGGACCATGACTCTGAATCTGCTTACCAATCAATCTCGGTTTAATCACCAAAAGTGCAGAGCAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CCAAGAGCATTACACCAGATCTCCTACGAAGATGTGGGATTTCCTCTAGGAAAACATTTTCCCTATTTCTaGACACTTTCAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRALHQISYEDVGFPLGKHFPYF*TLSGAS
Trigger: GGAAGCCCCTGAAAGTGTTCAGAAATAGGGAAAATG...TTTTCCTAGAGGAAATCCCACATCTTCGTAGGAGATCTGGTGTAATGCTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAGTGAAGAGGGTCCACTaGAGAACATCTAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLVKRVH*RTSRNS
Trigger: GCTGTTCCTAGATGTTCTTCAGTGGACCCTCTTCAC...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGTCAAGCTATTCTGTCTaGTCTGGGTTCTCAATGATC +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLSSYSV*SGFSMI
Trigger: GATCATTGAGAACCCAGATCAGACAGAATAGCTTGA...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATGTAGGAGGAAGCTCTaGCTATGCCAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLCRRKL*LCQGSG
Trigger: ACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCTCTGACTCTATTGCCTaGTCTGATGTTTCTCCATAT +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLSDSIA*SDVSPY
Trigger: ATATGGAGAAACATCAGATCAGGCAATAGAGTCAGA...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGGTGACTTGCTTTTTCTaGCTGAATGGTGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: QNFGNTPPLFPVTESCGKVTCFF*LNGEEF
Trigger: GAATTCCTCACCATTCAGGCAGAAAAAGCAAGTCAC...CTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR GCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGAGAGCAACGGTTTCATaGCTGTCAGCAAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMRATVS*LSARMG
Trigger: TCCCATCCTTGCTGACAGGCATGAAACCGTTGCTCT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGTGTGTATTCAGAGTTaGGGTGGCAAACCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAVCIQS*GGKPEV
Trigger: TACCTCAGGTTTGCCACCGCAACTCTGAATACACAC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGATATGTGCTAGAAGCTaGTCCTGGGAAATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMICARS*SWEMGQ
Trigger: CTGCCCCATTTCCCAGGAGCAGCTTCTAGCACATAT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAATATGTGCTAGAAGCTaGTCCTGGGAAATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLICARS*SWEMGQ
Trigger: CTGCCCCATTTCCCAGGAGCAGCTTCTAGCACATAT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTAGGAAGCTCCCCAAATaGCTCGCATCATCGTCTATT +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEARKLPK*LASSSI
Trigger: AATAGACGATGATGCGAGGCATTTGGGGAGCTTCCT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCCTGGAGTGCCTGAATaGAGCAGTGCAATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAPGVPE*SSAMRN
Trigger: ATTTCTCATTGCACTGCTGCATTCAGGCACTCCAGG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCGAGAAGAAAGATCAATaGATGCATCAACTGTACCAG +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLEKKDQ*MHQLYQ
Trigger: CTGGTACAGTTGATGCATGCATTGATCTTTCTTCTC...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AGCTGGAACAGTTTCTCATTTTCCCTATTTCTGAACACTTTCAGGGGCTTCCTTTGTGAGAGAGTGAGATaGGGGAGGGATGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: SWNSFSFSLFLNTFRGFLCERVR*GRDAMN
Trigger: ATTCATTGCATCCCTCCCCCATCTCACTCTCTCACA...AAGGAAGCCCCTGAAAGTGTTCAGAAATAGGGAAAATGAGAAACTGTTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp CTCAGCGGTGGTGCTAAGGGACTAACACAGACTTTAAGGTCACAAAACCATTGTATGATAATGGGAAACTaGCTGATGGAAAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: LSGGAKGLTQTLRSQNHCMIMGN*LMERAQ
Trigger: CTGTGCTCTTTCCATCAGCCAGTTTCCCATTATCAT...ACAATGGTTTTGTGACCTTAAAGTCTGTGTTAGTCCCTTAGCACCACCGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTATAAAGTGTCCAGTATaGCCAGCTGCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAIKCPV*PAASPW
Trigger: CCATGGAGAAGCAGCTGGCCATACTGGACACTTTAT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCCTCCCACAATTGCATaGTCATGTGAATGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAPPTIA*SCECPE
Trigger: TTCAGGGCATTCACATGACCATGCAATTGTGGGAGG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATACACTCGAGGCAGCATaGTCTACTGAGACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHTLEAA*STETRA
Trigger: GGCCCTAGTCTCAGTAGACCATGCTGCCTCGAGTGT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTTGTCCCAGAAGTCTTaGAGGGCTATGGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEALSQKS*RAMERK
Trigger: CTTTCTCTCCATAGCCCTCCAAGACTTCTGGGACAA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCGAAAAGCAACAACGCTaGACTATGGAGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLEKQQR*TMEFRN
Trigger: ATTTCTGAACTCCATAGTCCAGCGTTGTTGCTTTTC...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTGCTGCTCCTGGGAAATaGGGCAGAACAAACATAAGT +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAAAPGK*GRTNIS
Trigger: ACTTATGTTTGTTCTGCCCCATTTCCCAGGAGCAGC...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAAGCCCTGGGCTAAGGTaGTGCCAGATACTCTACATA +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLSPGLR*CQILYI
Trigger: TATGTAGAGTATCTGGCACCACCTTAGCCCAGGGCT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGACATTAAACATGCCATaGAACTGGCTCATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLTLNMP*NWLIAF
Trigger: GAAGGCTATGAGCCAGTTCCATGGCATGTTTAATGT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCTGTCGCTCATCGGTTaGTCCCAAGAGGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHLSLIG*SQEAPT
Trigger: TGTTGGAGCCTCTTGGGACCAACCGATGAGCGACAG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp ATTGTTTCCCGTCACAGAATCTTGTGGAAAGGAAGTTaGAGGTCCCTTGGTGACTTGCTTTTTCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: IVSRHRILWKGS*RSLGDLLFLPE
Trigger: TTCAGGCAGAAAAAGCAAGTCACCAAGGGACCTCAAACTTCCTTTCCACAAGATTCTGTGACGGGAAACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LLRFGDLDDGTECCTKACIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp AGCTGGAACAGTTTCTCATTTTCCCTATTTCTGAACACTTTCAGGGGCTTCCTTTCTCTTTGTTTCACATaGATGAGATCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SWNSFSFSLFLNTFRGFLSLCFT*MRSGGG
Trigger: CCCACCTCCAGATCTCATTCATGTGAAACAAAGAGA...AAGGAAGCCCCTGAAAGTGTTCAGAAATAGGGAAAATGAGAAACTGTTCCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAAGGGGGAGGGATGCAATaGATAAACAAGTTTCTAAAA +
Preference number: 4 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKGGGMQ*INKFLK
Trigger: TTTTAGAAACTTGTTTATTCATTGCATCCCTCCCCC...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGCTCTATTATATTTGCTaGAACTTACTAGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQLYYIC*NLLGPS
Trigger: ACTGGGTCCTAGTAAGTTTCAGCAAATATAATAGAG...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp GGATTTCCTCTAGGAAAAGGTGTGTATCCAGGTAATTTACTAAGCCAGAAGCTGCATTTTCCCTATTTCTaGACACTTTCAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GFPLGKGVYPGNLLSQKLHFPYF*TLSGAS
Trigger: GGAAGCCCCTGAAAGTGTTCAGAAATAGGGAAAATG...CAGCTTCTGGCTTAGTAAATTACCTGGATACACACCTTTTCCTAGAGGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR TCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTATACTCACTGCTCATaGGAGTGGGAGGGAAATAAC +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAYTHCS*EWEGNN
Trigger: GTTATTTCCCTCCCACTCTCATGAGCAGTGAGTATA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGTTGCGGTGGCAAACCTaGGGTATTTTCAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMLRWQT*GIFRVL
Trigger: TAGCACTCTGAAAATACCTCAGGTTTGCCACCGCAA...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGAATGCAGCAGTGCAATaGGAAATCATGCAAATAGTC +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLNAAVQ*EIMQIV
Trigger: GACTATTTGCATGATTTCTCATTGCACTGCTGCATT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCATGCCCTGGAGTGCCTaGATGCAGCAGTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSMPWSA*MQQCNE
Trigger: CTCATTGCACTGCTGCATTCAGGCACTCCAGGGCAT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCTTCAGCTCTTCTTTCTaGTTTACCGTCCTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LLRFGDLDDGTECCTKACFSSSF*FTVLSV
Trigger: CACACTAAGGACGGTAAAGCAGAAAGAAGAGCTGAA...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR GCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGTCATGGTCCCCGAATaGAATGCAAAGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSVMVPE*NAKACW
Trigger: CCAGCAGGCCTTTGCATTGCATTCGGGGACCATGAC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTGGATAACTACCTCATaGTGGAACTTCCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAWITTS*WNFPSC
Trigger: ACAGGAAGGGAAGTTCCAGCATGAGGTAGTTATCCA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACCTGGAGTGCCTGAATaGAGCAGTGCAATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLPGVPE*SSAMRN
Trigger: ATTTCTCATTGCACTGCTGCATTCAGGCACTCCAGG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGGAATTTCTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: NFGNTPPLFPVTESCGKEFLRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAGAAA...TTCCTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACAGCAGCTTATCATTTaGTTTCCAGTAGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLQQLII*FPVGLL
Trigger: CAGCAGGCCTACTGGAAACCAAATGATAAGCTGCTG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGCCTGTCAGCAAGGATaGGACTCCTGTCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLACQQG*DSCPRL
Trigger: AAGACGTGGACAGGAGTCCCATCCTTGCTGACAGGC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAGCAGATTCAGAGTCATaGTCCCCGAATGCAATGCAA +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLADSES*SPNAMQ
Trigger: TTGCATTGCATTCGGGGACCATGACTCTGAATCTGC...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAAAGGACCTTCTACCCTaGATAACTACCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLKDLLP*ITTSCW
Trigger: CCAGCATGAGGTAGTTATCCAGGGTAGAAGGTCCTT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAAAGCAACAACGCTaGACTATGGAGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLEKQQR*TMEFRN
Trigger: ATTTCTGAACTCCATAGTCCAGCGTTGTTGCTTTTC...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGAAGCTCTTGCAGTCTaGGGGGTGGGGGAACAGAAT +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSEALAV*GVGEQN
Trigger: ATTCTGTTCCCCCACCCCCCAGACTGCAAGAGCTTC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGAAGCTCTTGCAGTCTaGGGGGTGGGGGAACAGAAT +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLEALAV*GVGEQN
Trigger: ATTCTGTTCCCCCACCCCCCAGACTGCAAGAGCTTC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTCAACCATCCCAGGGTaGTTTCTGTTTGTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEASTIPG*FLFVRY
Trigger: GTACCTTACAAACAGAAACCACCCTGGGATGGTTGA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp CATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTaGGAAATTATCTGGCTCCTCTGCTTAAAAACTATG +
Preference number: 4 (lower is better)
Translates to: HMTLMQRQSRSH*EIIWLLCLKTM
Trigger: CATAGTTTTTAAGCAGAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGGGGGTTGGAGAGGGTTaGGGCTGTTGCTGGAAATTA +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVGVGEG*GCCWKL
Trigger: TAATTTCCAGCAACAGCCTCAACCCTCTCCAACCCC...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATAGGTGTCATCTCAAATaGCCTGTCCCACCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHRCHLK*PVPPLS
Trigger: TGAGAGAGGTGGGACAGGTCATTTGAGATGACACCT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATATACTCACTGCTCATaGGAGTGGGAGGGAAATAAC +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLYTHCS*EWEGNN
Trigger: GTTATTTCCCTCCCACTCTCATGAGCAGTGAGTATA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGGTAGATTTGGTGTGCTaGTGGCGGTACTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVVDLVC*WRYCWQ
Trigger: TTGCCAGCAGTACCGCCATCAGCACACCAAATCTAC...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGTAGATTTGGTGTGCTaGTGGCGGTACTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSVDLVC*WRYCWQ
Trigger: TTGCCAGCAGTACCGCCATCAGCACACCAAATCTAC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATGGACTATTGACTGTCTaGGACAGGATGGGAATTGGG +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHGLLTV*DRMGIG
Trigger: CCCAATTCCCATCCTGTCTCAGACAGTCAATAGTCC...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAACACATTTCTCATCTaGCACAGATTGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLNTFLI*HRLSTA
Trigger: GGCTGTGGACAATCTGTGTCAGATGAGAAATGTGTT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGACAGTATCAAGTCTCTaGTATGAAAATAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QNFGNTPPLFPVTESCGKTVSSL*YENKRA
Trigger: TGCCCTCTTATTTTCATAGCAGAGACTTGATACTGT...CTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR GCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGCTCTTCAATACTGTGTaGAGAAGAATCACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLLFNTV*RRITCK
Trigger: TTTACACGTGATTCTTCTGCACACAGTATTGAAGAG...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAGAGGTATTTTCAGAGTaGTACCTCTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLEVFSE*YLSKRP
Trigger: TGGTCTCTTGGAGAGGTAGCACTCTGAAAATACCTC...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCACTACCTATACAAATaGAAAATGGCCATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAHYLYK*KMAMLS
Trigger: GCTCAGCATGGCCATTTTGCATTTGTATAGGTAGTG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCATAAGGAATCTGACTTaGTTTCAAAAGTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLIRNLT*FQKSRD
Trigger: GTCTCTTGACTTTTGAAAGCAAGTCAGATTCCTTAT...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGAGTCTTGGAGGGCTATaGAGAGAAAGCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLSLGGL*RESFKY
Trigger: ATATTTAAAGCTTTCTCTCCATAGCCCTCCAAGACT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTACATTAAACATGCCATaGAACTGGCTCATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEATLNMP*NWLIAF
Trigger: GAAGGCTATGAGCCAGTTCCATGGCATGTTTAATGT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp GTCTCATCTTTCAACTATGACACTGTCCCAAAGCTTTaGAGATTGATAAACAGCTGCATTTTGCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VSSFNYDTVPKL*RLINSCILPAL
Trigger: CAGAGCAGGCAAAATGCAGCTGTTTATCAATCTCAAAAGCTTTGGGACAGTGTCATAGTTGAAAGATGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGGAACAGCTCATCCATCATTaGGTTATTTGGTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: NFGNTPPLFPVTESCGKEQLIHH*VIWFIF
Trigger: AAAGATGAACCAAATAACTCAATGATGGATGAGCTG...TTCCTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGTCAAGCTATTCTGTCTaGTCTGGGTTCTCAATGATC +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMSSYSV*SGFSMI
Trigger: GATCATTGAGAACCCAGATCAGACAGAATAGCTTGA...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCTGTAGGAGGAAGCTCTaGCTATGCCAAGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLCRRKL*LCQGSG
Trigger: ACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACA...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACCTCTTCTTGGAAAGTaGTTACACATCAGCGCAAAT +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLPLLGK*LHISAN
Trigger: ATTTGCGCTGATGTGTAATCACTTTCCAAGAAGAGG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGAGGCTCAACATTCTGTaGGAGCTCCTCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVRLNIL*ELLFWN
Trigger: GTTCCAGAAGAGGAGCTCTCACAGAATGTTGAGCCT...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGGGACTATTGACTGTCTaGGACAGGATGGGAATTGGG +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVGLLTV*DRMGIG
Trigger: CCCAATTCCCATCCTGTCTCAGACAGTCAATAGTCC...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATTGTACACAGGACTATTaGCTGTCTGAGACAGGATGG +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHCTQDY*LSETGW
Trigger: CCATCCTGTCTCAGACAGTCAATAGTCCTGTGTACA...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAGCTCATTCAAAATGCTaGGAGACAAGAACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLAHSKC*ETRTGN
Trigger: GTTACCTGTTCTTGTCTCTCAGCATTTTGAATGAGC...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGGCTCATTCAAAATGCTaGGAGACAAGAACAGGTAAC +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMAHSKC*ETRTGN
Trigger: GTTACCTGTTCTTGTCTCTCAGCATTTTGAATGAGC...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTCTGCTCTTATAACTTaGTGTTCAAGTCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEASALIT*CSSLQQ
Trigger: CTGCTGTAGACTTGAACAGCAAGTTATAAGAGCAGA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAAGATTGATAAACAGCTaGATTTTGCCTGCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLRLINS*ILPALH
Trigger: GTGCAGAGCAGGCAAAATGCAGCTGTTTATCAATCT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATGTGTGTATTCAGAGTTaGGGTGGCAAACCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHVCIQS*GGKPEV
Trigger: TACCTCAGGTTTGCCACCGCAACTCTGAATACACAC...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACACTACCTATACAAATaGAAAATGGCCATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLHYLYK*KMAMLS
Trigger: GCTCAGCATGGCCATTTTGCATTTGTATAGGTAGTG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGAAAATGATAAGAAGGTaGCTCAAGCCACTACTTATA +
Preference number: 4 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLKMIRR*LKPLLI
Trigger: TATAAGTAGTGGCTTGAGGCACCTTCTTATCATTTT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGGAAGTTTGAGGCATCAGGGTATGTTTTaGTGTCAAGTGTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: KYSPIVSRHRILWKGSLRHQGMF*CQVFSV
Trigger: AACAGAAAACACTTGACACCAAAACATACCCTGATG...CCTCAAACTTCCTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CCA 90 bp ACCCAAAGTTCTTATAGCAGTGACCTTTGGTCTATAATGCATGTAGAAGTATTGCTCAGAGTTGCCTCATaGTCCATGATGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TQSSYSSDLWSIMHVEVLLRVAS*SMMVSG
Trigger: TCCAGAAACCATCATGGACCATGAGGCAACTCTGAG...CAATACTTCTACATGCATTATAGACCAAAGGTCACTGCTATAAGAACTTTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATATAAAGTGTCCAGTATaGCCAGCTGCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHIKCPV*PAASPW
Trigger: CCATGGAGAAGCAGCTGGCCATACTGGACACTTTAT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGATAACTACCTCATGCTaGAACTTCCCTTCCTGTTAC +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMITTSC*NFPSCY
Trigger: GTAACAGGAAGGGAAGTTCCAGCATGAGGTAGTTAT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAACAACGCTGGACTATaGAGTTCAGAAATCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLNNAGL*SSEIPH
Trigger: ATGAGGGATTTCTGAACTCCATAGTCCAGCGTTGTT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACTTTCCAGCTACAAATaGGAATATGGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLLSSYK*EYGLLL
Trigger: AAGAAGGAGCCCATATTCCCATTTGTAGCTGGAAAG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CCAGCTCATCCATCATTGAGTTATTTGGTTCATCTTTCCTATCAAATGGTTTCCCTTGCTTTTTCTGCCTaGATGGTGAGGAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: PAHPSLSYLVHLSYQMVSLAFSA*MVRNSF
Trigger: GAAAGAATTCCTCACCATTCAGGCAGAAAAAGCAAG...GGAAACCATTTGATAGGAAAGATGAACCAAATAACTCAATGATGGATGAGCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACTCATCTTTCAACTATaGCACTGTCCCAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLLIFQL*HCPKAF
Trigger: AAAAGCTTTGGGACAGTGTCATAGTTGAAAGATGAG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGAGCAGCTGTTTAGAATaGTCACACTGCACAATTCTA +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMSSCLE*SHCTIL
Trigger: TAGAATTGTGCAGTGTGATCATTCTAAACAGCTGCT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGCAAAATGGCCATGCTaGGCAGCTTTCCTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSAKWPC*AAFLLC
Trigger: ACACAAAAGGAAAGCTGCTCAGCATGGCCATTTTGC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAAAGTACAGGCACGATaGAATTGTGTGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLKVQAR*NCVEMS
Trigger: AGACATTTCCACACAATTTCATCGTGCCTGTACTTT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAAAAGTACAGGCACGATaGAATTGTGTGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLKVQAR*NCVEMS
Trigger: AGACATTTCCACACAATTTCATCGTGCCTGTACTTT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCATCGTCTATTGCTCATaGCCCTCTGACTCTATTGCC +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLIVYCS*PSDSIA
Trigger: GGCAATAGAGTCAGAGGGTCATGAGCAATAGACGAT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAACTGGTTTTAATCAGTaGTTCAGAGACGCACCATTA +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLTGFNQ*FRDAPL
Trigger: TAATGGTGCGTCTCTGAATCACTGATTAAAACCAGT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGAATGCAGCAGTGCAATaGGAAATCATGCAAATAGTC +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMNAAVQ*EIMQIV
Trigger: GACTATTTGCATGATTTCTCATTGCACTGCTGCATT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATAACACATTTCTCATCTaGCACAGATTGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHNTFLI*HRLSTA
Trigger: GGCTGTGGACAATCTGTGTCAGATGAGAAATGTGTT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCAGCTGCATTTTGCCTaGTCTGCACTTTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHQLHFA*SALLVI
Trigger: AATCACCAAAAGTGCAGAGCAGGCAAAATGCAGCTG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGTCCATCCTAGAGATCTaGAGCAGGAACAGCATCATC +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVSILEI*SRNSII
Trigger: GATGATGCTGTTCCTGCTGCAGATCTCTAGGATGGA...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCTCCATCCTAGAGATCTaGAGCAGGAACAGCATCATC +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLSILEI*SRNSII
Trigger: GATGATGCTGTTCCTGCTGCAGATCTCTAGGATGGA...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGACTATCCCCGAGTCCTaGCATCATATTCATACTAAT +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMTIPES*HHIHTN
Trigger: ATTAGTATGAATATGATGGCAGGACTCGGGGATAGT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATGAGGTATTTTCAGAGTaGTACCTCTCCAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHEVFSE*YLSKRP
Trigger: TGGTCTCTTGGAGAGGTAGCACTCTGAAAATACCTC...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCCCTGGGCTAAGGTGGTaGCAGATACTCTACATATGT +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLPGLRW*QILYIC
Trigger: ACATATGTAGAGTATCTGGCACCACCTTAGCCCAGG...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCAGGAAGCTCCCCAAATaGCTCGCATCATCGTCTATT +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLRKLPK*LASSSI
Trigger: AATAGACGATGATGCGAGGCATTTGGGGAGCTTCCT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAGAAAGATCAATGCATaGATCAACTGTACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLRKINA*INCTRE
Trigger: CTCTCTGGTACAGTTGATGCATGCATTGATCTTTCT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGGAGAAGAAAGATCAATaGATGCATCAACTGTACCAG +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMEKKDQ*MHQLYQ
Trigger: CTGGTACAGTTGATGCATGCATTGATCTTTCTTCTC...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GTTCATCTTTCCTATCAAATGGTTTCCTTAAGAAGGCACTCAGGTATTATGTTCCGTCACAGAATCTTGTaGAAAGGAAGTTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VHLSYQMVSLRRHSGIMFRHRIL*KGSLRS
Trigger: GGACCTCAAACTTCCTTTCCACAAGATTCTGTGACG...GAACATAATACCTGAGTGCCTTCTTAAGGAAACCATTTGATAGGAAAGATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATTATTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLLFRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAATAA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGCCTCCCACAATTGCATaGTCATGTGAATGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVPPTIA*SCECPE
Trigger: TTCAGGGCATTCACATGACCATGCAATTGTGGGAGG...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGGCAGATTCAGAGTCATaGTCCCCGAATGCAATGCAA +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVADSES*SPNAMQ
Trigger: TTGCATTGCATTCGGGGACCATGACTCTGAATCTGC...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAAGGACCTTCTACCCTaGATAACTACCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSKDLLP*ITTSCW
Trigger: CCAGCATGAGGTAGTTATCCAGGGTAGAAGGTCCTT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACTATTCTGTCTGATCTaGGTTCTCAATGATCTCAGA +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLLFCLI*VLNDLR
Trigger: TCTGAGATCATTGAGAACCCAGATCAGACAGAATAG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGTCATTGCCCTCTTCTTaGAAAGTGATTACACATCAG +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMSLPSS*KVITHQ
Trigger: CTGATGTGTAATCACTTTCCAAGAAGAGGGCAATGA...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTATCATTGCCCTCTTCTTaGAAAGTGATTACACATCAG +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLSLPSS*KVITHQ
Trigger: CTGATGTGTAATCACTTTCCAAGAAGAGGGCAATGA...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTAGTCTTGGAGGGCTATaGAGAGAAAGCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEASLGGL*RESFKY
Trigger: ATATTTAAAGCTTTCTCTCCATAGCCCTCCAAGACT...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCTTGTCCCAGAAGTCTTaGAGGGCTATGGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLLSQKS*RAMERK
Trigger: CTTTCTCTCCATAGCCCTCCAAGACTTCTGGGACAA...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATAGACAGGATGGGAATTaGGAACATTTACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHRQDGN*EHLQGR
Trigger: CCTTCCCTGTAAATGTTCCCAATTCCCATCCTGTCT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp GCATCATCGTCTATTGCTCATGACCCTCTGACTCTATaGCCTGATCTGATGTTTCTCCATATGTATGATTTT +
Preference number: 4 (lower is better)
Translates to: ASSSIAHDPLTL*PDLMFLHMYDF
Trigger: AAAATCATACATATGGAGAAACATCAGATCAGGCAATAGAGTCAGAGGGTCATGAGCAATAGACGATGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp CTACCAGCTCATCCATCATTGAGTTATTTGGTTCATCTTTCCTATCAAATGGTTATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LPAHPSLSYLVHLSYQMVIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...AACCATTTGATAGGAAAGATGAACCAAATAACTCAATGATGGATGAGCTGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGTCTAAACCTTGCTTTTaGAGTGGAGTAATAATCCCT +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMSKPCF*SGVIIP
Trigger: AGGGATTATTACTCCACTTCAAAAGCAAGGTTTAGA...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAACGTGTAAAGTTTACTaGAATGCAGATTCCTATGTC +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLTCKVY*NADSYV
Trigger: GACATAGGAATCTGCATTTCAGTAAACTTTACACGT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCCTCTTCTTGGAAAGTaGTTACACATCAGCGCAAAT +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHPLLGK*LHISAN
Trigger: ATTTGCGCTGATGTGTAATCACTTTCCAAGAAGAGG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAACAGGGAGGAAATACTaGCCACACTTTAAATATATG +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLTGRKY*PHFKYM
Trigger: CATATATTTAAAGTGTGGTCAGTATTTCCTCCCTGT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACACTGTGCAGAAGAATaGCCACTCAATATTGTTTTA +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLHCAEE*PLNIVL
Trigger: TAAAACAATATTGAGTGGGCATTCTTCTGCACAGTG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAGTCCAGGTCACACTTaGAAATTATCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSSPGHT*KLSGSS
Trigger: AGAGGAGCCAGATAATTTCCAAGTGTGACCTGGACT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATATAACTACCTCATGCTaGAACTTCCCTTCCTGTTAC +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHITTSC*NFPSCY
Trigger: GTAACAGGAAGGGAAGTTCCAGCATGAGGTAGTTAT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCTCTTTCTACAGATGTaGAAAAAGGGTAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEALFLQM*KKGNWK
Trigger: TTTCCAATTACCCTTTTTCCACATCTGTAGAAAGAG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGCTCATAGTTACAATTTaGTTTCACTCCCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMLIVTI*FHSQKG
Trigger: TCCCTTTTGGGAGTGAAACCAAATTGTAACTATGAG...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACTCATAGTTACAATTTaGTTTCACTCCCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLLIVTI*FHSQKG
Trigger: TCCCTTTTGGGAGTGAAACCAAATTGTAACTATGAG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCTCAACCATCCCAGGGTaGTTTCTGTTTGTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSSTIPG*FLFVRY
Trigger: GTACCTTACAAACAGAAACCACCCTGGGATGGTTGA...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGTTAGCCTTTGGCATCTaGTCTATCATGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMLAFGI*SIMFLL
Trigger: AAGAAGAAACATGATAGACCAGATGCCAAAGGCTAA...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTATTAGCCTTTGGCATCTaGTCTATCATGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLLAFGI*SIMFLL
Trigger: AAGAAGAAACATGATAGACCAGATGCCAAAGGCTAA...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAGTACATTTTAGCCTTTaGCATCTGGTCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLVHFSL*HLVYHV
Trigger: AACATGATAGACCAGATGCCAAAGGCTAAAATGTAC...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGGTACATTTTAGCCTTTaGCATCTGGTCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: PAIIFILIREGDLYSLLMVHFSL*HLVYHV
Trigger: AACATGATAGACCAGATGCCAAAGGCTAAAATGTAC...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp AACACTGGCTATGAATTATGGTACTTAATATGGAATTaGCTGATTTTCAGCTTGGGTTTGGGTGGCCCATTA +
Preference number: 4 (lower is better)
Translates to: NTGYELWYLIWN*LIFSLGLGGPL
Trigger: TAATGGGCCACCCAAACCCAAGCTGAAAATCAGCAAATTCCATATTAAGTACCATAATTCATAGCCAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp ATTGATAAACAGCTGCATTTTGCCTGCTCTGCACTTTaGGTGATTAAACCGAGATTGATTGGTAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: IDKQLHFACSAL*VIKPRLIGKQI
Trigger: AATCTGCTTACCAATCAATCTCGGTTTAATCACCAAAAGTGCAGAGCAGGCAAAATGCAGCTGTTTATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
3UTR CAA 72 bp CAATACAAATCTAAACATGAAACTGTCGCTCATCGGTaGGTCCCAAGAGGCTCCAACATATTATATTCTAAG +
Preference number: 4 (lower is better)
Translates to: QYKSKHETVAHR*VPRGSNILYSK
Trigger: CTTAGAATATAATATGTTGGAGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCATCCCTTCAAAAATTTaGGACCTCTCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLIPSKI*DLSSAT
Trigger: TGTGGCTGAAGAGAGGTCTCAAATTTTTGAAGGGAT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp GTTCATCTTTCCTATCAAATGGTTTCCTTAAGAAGGCACTCAGGTATTATGTTCTTTCTGCCTGAATGGTaGGGAATTCTTTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: VHLSYQMVSLRRHSGIMFFLPEW*GILSSF
Trigger: GAATGAAGAAAGAATTCCTCACCATTCAGGCAGAAA...GAACATAATACCTGAGTGCCTTCTTAAGGAAACCATTTGATAGGAAAGATGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCTCATCTTTCAACTATaGCACTGTCCCAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHLIFQL*HCPKAF
Trigger: AAAAGCTTTGGGACAGTGTCATAGTTGAAAGATGAG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATAGCAGCTGTTTAGAATaGTCACACTGCACAATTCTA +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHSSCLE*SHCTIL
Trigger: TAGAATTGTGCAGTGTGATCATTCTAAACAGCTGCT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCCTCATCATGGAATATaGCATTGGGGGAAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHPHHGI*HWGKFN
Trigger: ATTAAACTTCCCCCAATGTCATATTCCATGATGAGG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGAACATGAGGGAGAGCTaGATACTTGTAAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVNMRES*ILVKPV
Trigger: CACAGGTTTTACAAGTATTCAGCTCTCCCTCATGTT...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAACATGAGGGAGAGCTaGATACTTGTAAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSNMRES*ILVKPV
Trigger: CACAGGTTTTACAAGTATTCAGCTCTCCCTCATGTT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATTCTGCTCTTATAACTTaGTGTTCAAGTCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHSALIT*CSSLQQ
Trigger: CTGCTGTAGACTTGAACAGCAAGTTATAAGAGCAGA...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGCATGGTCATGTGAATaGCCTGAACATCTTTACTAC +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLAWSCE*PEHLYY
Trigger: GTAGTAAAGATGTTCAGGGCATTCACATGACCATGC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATACTATCCCCGAGTCCTaGCATCATATTCATACTAAT +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHTIPES*HHIHTN
Trigger: ATTAGTATGAATATGATGGCAGGACTCGGGGATAGT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCCAGCTTGGGTTTGGGTaGCCCATTAGACTAAAATAT +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSQLGFG*PIRLKY
Trigger: ATATTTTAGTCTAATGGGCCACCCAAACCCAAGCTG...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGCAGCTTGGGTTTGGGTaGCCCATTAGACTAAAATAT +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVQLGFG*PIRLKY
Trigger: ATATTTTAGTCTAATGGGCCACCCAAACCCAAGCTG...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCACCTTGCTTTTGAAGTaGAGTAATAATCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLTLLLK*SNNPSG
Trigger: CCCAGAGGGATTATTACTCCACTTCAAAAGCAAGGT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGACCTTGCTTTTGAAGTaGAGTAATAATCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVTLLLK*SNNPSG
Trigger: CCCAGAGGGATTATTACTCCACTTCAAAAGCAAGGT...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACTCTTTCTACAGATGTaGAAAAAGGGTAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLLFLQM*KKGNWK
Trigger: TTTCCAATTACCCTTTTTCCACATCTGTAGAAAGAG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCAACAACGCTGGACTATaGAGTTCAGAAATCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSNNAGL*SSEIPH
Trigger: ATGAGGGATTTCTGAACTCCATAGTCCAGCGTTGTT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGCTTTCCAGCTACAAATaGGAATATGGGCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVLSSYK*EYGLLL
Trigger: AAGAAGGAGCCCATATTCCCATTTGTAGCTGGAAAG...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TCATCTTTCCTATCAAATGGTTTCCTTAAGAAGGCACTCAGGTATTATGTTCTGTCAGGTATTATGTTCTaGGTTCTTACCTGCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SSFLSNGFLKKALRYYVLSGIMF*VLTCLR
Trigger: TCTTAAGCAGGTAAGAACTCAGAACATAATACCTGA...CAGAACATAATACCTGAGTGCCTTCTTAAGGAAACCATTTGATAGGAAAGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGCCTCATCATGGAATATaGCATTGGGGGAAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVPHHGI*HWGKFN
Trigger: ATTAAACTTCCCCCAATGTCATATTCCATGATGAGG...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCTCTGACTCTATTGCCTaGTCTGATGTTTCTCCATAT +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSSDSIA*SDVSPY
Trigger: ATATGGAGAAACATCAGATCAGGCAATAGAGTCAGA...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCACTGGTTTTAATCAGTaGTTCAGAGACGCACCATTA +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLTGFNQ*FRDAPL
Trigger: TAATGGTGCGTCTCTGAATCACTGATTAAAACCAGT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATACTCTGGAACAGAAGTaGTTAATACAGGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHTLEQK*LIQETK
Trigger: CTTTGTTTCCTGTATTAATCACTTCTGTTCCAGAGT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATCTCTTCAATACTGTGTaGAGAAGAATCACGTGTAAA +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHLFNTV*RRITCK
Trigger: TTTACACGTGATTCTTCTGCACACAGTATTGAAGAG...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGTTATTTAGGGCTGTCTaGATATCCTTCTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVLFRAV*ISFSPF
Trigger: AAATGGGGAGAAGGATATCCAGACAGCCCTAAATAA...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGAAATGCTTTGAGCGATaGGAACAAAGTGATTACTCT +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVKCFER*EQSDYS
Trigger: AGAGTAATCACTTTGTTCTCATCGCTCAAAGCATTT...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGACTCTGGAACAGAAGTaGTTAATACAGGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVTLEQK*LIQETK
Trigger: CTTTGTTTCCTGTATTAATCACTTCTGTTCCAGAGT...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR TCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCACAGGGAGGAAATACTaGCCACACTTTAAATATATG +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLTGRKY*PHFKYM
Trigger: CATATATTTAAAGTGTGGTCAGTATTTCCTCCCTGT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCCACTGTGCAGAAGAATaGCCACTCAATATTGTTTTA +
Preference number: 4 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSHCAEE*PLNIVL
Trigger: TAAAACAATATTGAGTGGGCATTCTTCTGCACAGTG...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATAAAATGATAAGAAGGTaGCTCAAGCCACTACTTATA +
Preference number: 4 (lower is better)
Translates to: SGREITHTHLGKIQNNQHKMIRR*LKPLLI
Trigger: TATAAGTAGTGGCTTGAGGCACCTTCTTATCATTTT...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR GCA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCATAAGGAATCTGACTTaGTTTCAAAAGTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLIRNLT*FQKSRD
Trigger: GTCTCTTGACTTTTGAAAGCAAGTCAGATTCCTTAT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS TCA 90 bp CGGCGAACGAGCTGCCGGTCGCAGGCGGCGCCACGGCGCACCACCTaGACCCTCGACTCGCCGGGCCCGGGACGCGCTCGCGCATGCCCA +
Preference number: 5 (lower is better)
Translates to: RRTSCRSQAAPRRTT*TLDSPGPGRARACP
Trigger: TGGGCATGCGCGAGCGCGTCCCGGGCCCGGCGAGTCGAGGGTTCAGGTGGTGCGCCGTGGCGCCGCCTGCGACCGGCAGCTCGTTCGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258679.11
ENST00000622102.4
CDS GCA 90 bp GTCCGGGCCCTACGTGGGTCGGAGGGGCAGCCGAAGCCTCCAAAGTaGGGCGAACGAGCTGCCGGTCGCAGGCGGCGCCACGGCGCACCA +
Preference number: 5 (lower is better)
Translates to: VRALRGSEGQPKPPK*GERAAGRRRRHGAP
Trigger: TGGTGCGCCGTGGCGCCGCCTGCGACCGGCAGCTCGTTCGCCGCACTTTGGAGGCTTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258679.11
ENST00000622102.4
ENST00000649443.1
CDS CCA 90 bp CTGCGGCGGCCTCGGCGCTTGAAGCCCAGCCAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTGTTCACAAGGAGGCCCGGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: LRRPRRLKPSQPVNP*GEAGTLFTRRPGSG
Trigger: CCCGGACCCGGGCCTCCTTGTGAACAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTGGCTGGGCTTCAAGCGCCGAGGCCGCCGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258679.11
ENST00000396257.6
ENST00000396259.5
ENST00000449726.6
ENST00000622102.4
ENST00000649443.1
CDS CCA 90 bp AAGCCGGCACGCTGTTCACAAGGAGGCCCGGGTCCGGGCCCTACGTaGGTCGGAGGGGCAGCCGAAGCCTCCAAAGTGCGGCGAACGAGC +
Preference number: 5 (lower is better)
Translates to: KPARCSQGGPGPGPT*VGGAAEASKVRRTS
Trigger: GCTCGTTCGCCGCACTTTGGAGGCTTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGACCCGGGCCTCCTTGTGAACAGCGTGCCGGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258679.11
ENST00000396257.6
ENST00000396259.5
ENST00000449726.6
ENST00000622102.4
ENST00000649443.1
CDS-3UTR CAA 90 bp CTCTCCAGGAGGCATCTCGGGGCTTGCTGGGCATCCTGGCCCAGGAGAGGCATTGAGGCATCTCGGGGCTaGCTGGGCATCCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LSRRHLGACWASWPRRGIEASRG*LGILAQ
Trigger: CTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTC...AATGCCTCTCCTGGGCCAGGATGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CAA 90 bp TACTCTCACATACTTCCTTCTCTCCAGGAGGCATCTCGGGGCTTGCTGGGCATCCGGCGGCCTCGGCGCTaGAAGCCCAGCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: YSHILPSLQEASRGLLGIRRPRR*KPSQPV
Trigger: CACCGGCTGGCTGGGCTTCAAGCGCCGAGGCCGCCG...GATGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CAA 90 bp TTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCCGGCGGCCTCGGCGCTaGAAGCCCAGCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LFHMNEIWRWAVQDGIGCRRPRR*KPSQPV
Trigger: CACCGGCTGGCTGGGCTTCAAGCGCCGAGGCCGCCG...GCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS TCA 90 bp GGTCATCATGTCCTGCAGGCCACTCTGCACCCGCCTGATTCTGAGTaGCAGCCCTCCTGGGCCACCATCAGACATTTGTGTGTCCCGCAA +
Preference number: 5 (lower is better)
Translates to: GHHVLQATLHPPDSE*QPSWATIRHLCVPQ
Trigger: TTGCGGGACACACAAATGTCTGATGGTGGCCCAGGAGGGCTGTCACTCAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGACATGATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS GCA 90 bp ATGCATCCTGTCTCATGCTGGGTCATCATGTCCTGCAGGCCACTCTaGACCCGCCTGATTCTGAGTGACAGCCCTCCTGGGCCACCATCA +
Preference number: 5 (lower is better)
Translates to: MHPVSCWVIMSCRPL*TRLILSDSPPGPPS
Trigger: TGATGGTGGCCCAGGAGGGCTGTCACTCAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGACATGATGACCCAGCATGAGACAGGATGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CAA 90 bp TTGTGGAAAGGAAGTTTGAGGTCCCTTGGTGACTTGCTTTTTCTGCCTGAATGGCGGCGGCCTCGGCGCTaGAAGCCCAGCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LWKGSLRSLGDLLFLPEWRRPRR*KPSQPV
Trigger: CACCGGCTGGCTGGGCTTCAAGCGCCGAGGCCGCCG...CCATTCAGGCAGAAAAAGCAAGTCACCAAGGGACCTCAAACTTCCTTTCCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp ATGGGAAACTGGCTGATGGAAAGAGCACAGCTCCGATATGTGACACAATGGAAACGGCGGCCTCGGCGCTaGAAGCCCAGCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: MGNWLMERAQLRYVTQWKRRPRR*KPSQPV
Trigger: CACCGGCTGGCTGGGCTTCAAGCGCCGAGGCCGCCG...TTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTCCATCAGCCAGTTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACGGCGGCCTCGGCGCTaGAAGCCCAGCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLRRPRR*KPSQPV
Trigger: CACCGGCTGGCTGGGCTTCAAGCGCCGAGGCCGCCG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449726.6
CDS-3UTR CAA 90 bp GAGAGGCGTCACCCAGATGTGATGCATCCTGTCTCATGCTGGGTCATCATGTCCGCCACCATCAGACATTaGTGTGTCCCGCAAAAACCC +
Preference number: 5 (lower is better)
Translates to: ERRHPDVMHPVSCWVIMSATIRH*CVPQKP
Trigger: GGGTTTTTGCGGGACACACAAATGTCTGATGGTGGC...GGACATGATGACCCAGCATGAGACAGGATGCATCACATCTGGGTGACGCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CAA 90 bp CTGAGGCCTGCACCAGGTGCAGATGTTGGTGCCATGCTTCTTGTACAGCCTCATCACCAGGTGCAGATGTaGGTGCCATGCTTCTTGTAC +
Preference number: 5 (lower is better)
Translates to: LRPAPGADVGAMLLVQPHHQVQM*VPCFLY
Trigger: GTACAAGAAGCATGGCACCAACATCTGCACCTGGTG...ATGAGGCTGTACAAGAAGCATGGCACCAACATCTGCACCTGGTGCAGGCCTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CAA 90 bp CTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCCTTCTGTCTTCCACCTaGAGTGGAAGCAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LEVGSAGRNWLLLYHQGFLLSST*SGSSLR
Trigger: CCTCAGGCTGCTTCCACTCAAGGTGGAAGACAGAAG...GAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS TCA 90 bp GTCCTTAGTGTGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATaGTGGTTTCTGGAGTTCCGTCTACACCCACATTCCTACACCGCA +
Preference number: 5 (lower is better)
Translates to: VLSVWLPSSELPHGP*WFLEFRLHPHSYTA
Trigger: TGCGGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACACACTAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396257.6
CDS CCA 90 bp TGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTaGAGTTCCGTCTACACCCACATTCCTACACTTAGGGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: CGFHPQSCLMVHDGF*SSVYTHIPTLRAVW
Trigger: CCAGACAGCCCTAAGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396259.5
CDS CCA 90 bp TGTGGCTTCCATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTaGAGTTCCGTCTACACCCACATTCCTACACCGCAAAAACCCCTC +
Preference number: 5 (lower is better)
Translates to: CGFHPQSCLMVHDGF*SSVYTHIPTPQKPL
Trigger: GAGGGGTTTTTGCGGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATGGAAGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396257.6
CDS-3UTR CAA 90 bp GATACTCTCACATACTTCCTTCTCTCCAGGAGGCATCTCGGGGCTTGCTGGGCAACTGTAGGGCCAAGTTaGTCTAATACTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: DTLTYFLLSRRHLGACWATVGPS*SNTGTT
Trigger: TGTGGTTCCAGTATTAGACAAACTTGGCCCTACAGT...TGCCCAGCAAGCCCCGAGATGCCTCCTGGAGAGAAGGAAGTATGTGAGAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS-3UTR CAA 90 bp TCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTTTCAATGATTCCCCCTaGCCCGTATTTTCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SGGGQCRTELAASLSSGFFNDSP*PVFSAG
Trigger: TCCAGCTGAAAATACGGGCAAGGGGGAATCATTGAA...AAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp TGGGCAGTGCAGGACGGAATTGGCTGCTTCTTTATCATCAGGGTTTCAGCTCTTACCTTCCTTCCTCTCTaGCCATGTGATCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: WAVQDGIGCFFIIRVSALTFLPL*PCDLST
Trigger: TGTGGAGAGATCACATGGCAAGAGAGGAAGGAAGGT...AAGAGCTGAAACCCTGATGATAAAGAAGCAGCCAATTCCGTCCTGCACTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CAA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGCACTCCATATGACTTaGATGCAGAGGCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLALHMT*MQRQSR
Trigger: CCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGC...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp ACTCAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAGGTCCCTTGGTGACTaGCTTTTTCTGCCTGAATGG +
Preference number: 5 (lower is better)
Translates to: TQNFGNTPPLFPVTESCGRSLGD*LFLPEW
Trigger: CCATTCAGGCAGAAAAAGCAAGTCACCAAGGGACCT...TCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp ACAAAACGTCCCTTTCAGCAAAATCTCAGCGGTGGTGCTAAGGGACTAACACAGTTCAATGATTCCCCCTaGCCCGTATTTTCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TKRPFQQNLSGGAKGLTQFNDSP*PVFSAG
Trigger: TCCAGCTGAAAATACGGGCAAGGGGGAATCATTGAA...CTGTGTTAGTCCCTTAGCACCACCGCTGAGATTTTGCTGAAAGGGACGTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCTTGCTGATTTTCAGCTaGGGTTTGGGTGGCCCATTA +
Preference number: 5 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLLLIFS*GLGGPL
Trigger: TAATGGGCCACCCAAACCCAAGCTGAAAATCAGCAA...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp AGTTTCTCTTTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAACTGTAGGGCCAAGTTaGTCTAATACTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: SFSLFHMNEIWRWAVQDGTVGPS*SNTGTT
Trigger: TGTGGTTCCAGTATTAGACAAACTTGGCCCTACAGT...TCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAAAGAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396257.6
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp ACTCAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGATTGTGGAAAGGAAGTTaGAGGTCCCTTGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: TQNFGNTPPLFPVTESCGLWKGS*RSLGDL
Trigger: CAAGTCACCAAGGGACCTCAAACTTCCTTTCCACAA...TCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp TACTCAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGTCCCGTCACAGAATCTaGTGGAAAGGAAGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: YSELRKYSPIVSRHRILWSRHRI*WKGSLR
Trigger: CCTCAAACTTCCTTTCCACAAGATTCTGTGACGGGA...CCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTCTTCGCCTCCCACAATaGCATGGTCATGTGAATGCC +
Preference number: 5 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEALRLPQ*HGHVNA
Trigger: GGCATTCACATGACCATGCAATTGTGGGAGGCGAAG...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp ACTCAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAACTGTAGGGCCAAGTTaGTCTAATACTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: TQNFGNTPPLFPVTESCGTVGPS*SNTGTT
Trigger: TGTGGTTCCAGTATTAGACAAACTTGGCCCTACAGT...TCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp TTGTTTCACATGAATGAGATCTGGAGGTGGGCAGTGCAGGACGGAATTGGCTGCACACAATGGAAACATTaGGGCATTAGAAAGACTTCA +
Preference number: 5 (lower is better)
Translates to: LFHMNEIWRWAVQDGIGCTQWKH*GIRKTS
Trigger: TGAAGTCTTTCTAATGCCCAAATGTTTCCATTGTGT...GCAGCCAATTCCGTCCTGCACTGCCCACCTCCAGATCTCATTCATGTGAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp CATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTGGAGTTCCGTCTACACCCTGTCTCTATTATATTaGCTGAAACTTACTAGGACC +
Preference number: 5 (lower is better)
Translates to: HPQSCLMVHDGFWSSVYTLSLLY*LKLTRT
Trigger: GGTCCTAGTAAGTTTCAGCAAATATAATAGAGACAG...GGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CAA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCACTGTCCCAAAGCTTTaGAGATTGATAAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLTVPKL*RLINSC
Trigger: GCAGCTGTTTATCAATCTCAAAAGCTTTGGGACAGT...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp ATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGGAAATTATCTGGCTCCTCCTCATTGCCCTCTTCTaGGAAAGTGATTACACATCA +
Preference number: 5 (lower is better)
Translates to: MTLMQRQSRSHLEIIWLLLIALF*ESDYTS
Trigger: TGATGTGTAATCACTTTCCAAGAAGAGGGCAATGAG...GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTTCGAAGTCAATGTCTaGGGCCCACAGGCTCAACAT +
Preference number: 5 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEAFEVNV*GPQAQH
Trigger: ATGTTGAGCCTGTGGGCCCAAGACATTGACTTCGAA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCTTGGTGCCATGCTTCTaGTACAGCCTCATCAGATTC +
Preference number: 5 (lower is better)
Translates to: LLRFGDLDDGTECCTKACLVPCF*YSLIRF
Trigger: GAATCTGATGAGGCTGTACAAGAAGCATGGCACCAA...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS-3UTR CAA 90 bp AACAATACAAATCTAAACATGAAACTGTCGCTCATCGGTTGGTCCCAAGAGGCTTTGCTGATTTTCAGCTaGGGTTTGGGTGGCCCATTA +
Preference number: 5 (lower is better)
Translates to: NNTNLNMKLSLIGWSQEALLIFS*GLGGPL
Trigger: TAATGGGCCACCCAAACCCAAGCTGAAAATCAGCAA...AGCCTCTTGGGACCAACCGATGAGCGACAGTTTCATGTTTAGATTTGTATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGCAGTCCAGGTCACACTaGGAAATTATCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PAIIFILIREGDLYSLLMQSRSH*EIIWLL
Trigger: GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTG...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTACAGTCCAGGTCACACTaGGAAATTATCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLQSRSH*EIIWLL
Trigger: GAGGAGCCAGATAATTTCCAAGTGTGACCTGGACTG...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TTTGAACAAGCACTCCATATGACTTTGATGCAGAGGCAGTCCAGGTCACACTTGACTGTCCCAAAGCTTTaGAGATTGATAAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: FEQALHMTLMQRQSRSHLTVPKL*RLINSC
Trigger: GCAGCTGTTTATCAATCTCAAAAGCTTTGGGACAGT...CAAGTGTGACCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGCTTGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp GGATTTCCTCTAGGAAAAGGTGTGTATCCAGGTAATTTACTAAGCCAGAAGCTGACTGTAGGGCCAAGTTaGTCTAATACTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: GFPLGKGVYPGNLLSQKLTVGPS*SNTGTT
Trigger: TGTGGTTCCAGTATTAGACAAACTTGGCCCTACAGT...CAGCTTCTGGCTTAGTAAATTACCTGGATACACACCTTTTCCTAGAGGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp GAAAGAGCACAGCTCCGATATGTGACACAATGGAAACATTTGGGCATTAGAAAGACTGTAGGGCCAAGTTaGTCTAATACTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: ERAQLRYVTQWKHLGIRKTVGPS*SNTGTT
Trigger: TGTGGTTCCAGTATTAGACAAACTTGGCCCTACAGT...CTTTCTAATGCCCAAATGTTTCCATTGTGTCACATATCGGAGCTGTGCTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp CAGAACTTCGGAAATACTCCCCCATTGTTTCCCGTCACAGAATCTTGTGGAAAGTCATCAGGGTATGTTTaGGTGTCAAGTGTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: QNFGNTPPLFPVTESCGKSSGYV*VSSVFC
Trigger: ACAGAAAACACTTGACACCAAAACATACCCTGATGA...CTTTCCACAAGATTCTGTGACGGGAAACAATGGGGGAGTATTTCCGAAGTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAACAGCAGCTTATCATTaGGTTTCCAGTAGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLTAAYH*VSSRPA
Trigger: AGCAGGCCTACTGGAAACCAAATGATAAGCTGCTGT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGGCCTGCTCTGCACTTTaGGTGATTAAACCGAGATTG +
Preference number: 5 (lower is better)
Translates to: PAIIFILIREGDLYSLLMACSAL*VIKPRL
Trigger: CAATCTCGGTTTAATCACCAAAAGTGCAGAGCAGGC...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAACTGTAGGGCCAAGTTaGTCTAATACTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLTVGPS*SNTGTT
Trigger: TGTGGTTCCAGTATTAGACAAACTTGGCCCTACAGT...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCCTTCGCCTCCCACAATaGCATGGTCATGTGAATGCC +
Preference number: 5 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLLRLPQ*HGHVNA
Trigger: GGCATTCACATGACCATGCAATTGTGGGAGGCGAAG...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGGTAAATGGTAGGCAGTaGGGAGGTGTCATCTCAAAT +
Preference number: 5 (lower is better)
Translates to: PAIIFILIREGDLYSLLMVNGRQ*GGVISN
Trigger: ATTTGAGATGACACCTCCCAACTGCCTACCATTTAC...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCGCACTCCATATGACTTaGATGCAGAGGCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSALHMT*MQRQSR
Trigger: CCTGGACTGCCTCTGCATCAAAGTCATATGGAGTGC...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp AGTGGGAGGGAAATAACACACACACACCTTGGCAAAATACAAAATAATCAACATGTTGTCCCAGAAGTCTaGGAGGGCTATGGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: SGREITHTHLGKIQNNQHVVPEV*EGYGEK
Trigger: TTTCTCTCCATAGCCCTCCAAGACTTCTGGGACAAC...ATGTTGATTATTTTGTATTTTGCCAAGGTGTGTGTGTGTTATTTCCCTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TTACTAAGATTTGGTGATCTGGATGATGGCACAGAGTGCTGTACTAAAGCCTGCACACAATGGAAACATTaGGGCATTAGAAAGACTTCA +
Preference number: 5 (lower is better)
Translates to: LLRFGDLDDGTECCTKACTQWKH*GIRKTS
Trigger: TGAAGTCTTTCTAATGCCCAAATGTTTCCATTGTGT...GCAGGCTTTAGTACAGCACTCTGTGCCATCATCCAGATCACCAAATCTTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396259.5
ENST00000649443.1
CDS-3UTR CAA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTACTCATTGCCCTCTTCTaGGAAAGTGATTACACATCA +
Preference number: 5 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLLIALF*ESDYTS
Trigger: TGATGTGTAATCACTTTCCAAGAAGAGGGCAATGAG...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGTTGTCCCAGAAGTCTaGGAGGGCTATGGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLVVPEV*EGYGEK
Trigger: TTTCTCTCCATAGCCCTCCAAGACTTCTGGGACAAC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCTTCGAAGTCAATGTCTaGGGCCCACAGGCTCAACAT +
Preference number: 5 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLFEVNV*GPQAQH
Trigger: ATGTTGAGCCTGTGGGCCCAAGACATTGACTTCGAA...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCACAGCAGCTTATCATTaGGTTTCCAGTAGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLTAAYH*VSSRPA
Trigger: AGCAGGCCTACTGGAAACCAAATGATAAGCTGCTGT...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTAGTGATTAAACCGAGATaGATTGGTAAGCAGATTCAG +
Preference number: 5 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLVIKPR*IGKQIQ
Trigger: CTGAATCTGCTTACCAATCAATCTCGGTTTAATCAC...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGCCTGCTCTGCACTTTaGGTGATTAAACCGAGATTG +
Preference number: 5 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLACSAL*VIKPRL
Trigger: CAATCTCGGTTTAATCACCAAAAGTGCAGAGCAGGC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp GAAGAATCACGTGTAAAGTTTACTGAAATGCAGATTCCTATGTCCCACCACCTATCCCAGCAAATTAAGTaGTGTACATCTAGTCACTAC +
Preference number: 5 (lower is better)
Translates to: EESRVKFTEMQIPMSHHLSQQIK*CTSSHY
Trigger: GTAGTGACTAGATGTACACAACTTAATTTGCTGGGA...TAGGTGGTGGGACATAGGAATCTGCATTTCAGTAAACTTTACACGTGATTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TATTTGTGTCTACAATACCTAGTAGACCAATTTCCTTTTTCTTCCAGTTCTCTCGACCCTCTGACTCTATaGCCTGATCTGATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YLCLQYLVDQFPFSSSSLDPLTL*PDLMFL
Trigger: GAGAAACATCAGATCAGGCAATAGAGTCAGAGGGTC...GAGAGAACTGGAAGAAAAAGGAAATTGGTCTACTAGGTATTGTAGACACAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp AAACTAGAATTTAATCTAGTTGCTCTTCAATACTGTGTGCAGAAGAATCACGTGGACCCTCTGACTCTATaGCCTGATCTGATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: KLEFNLVALQYCVQKNHVDPLTL*PDLMFL
Trigger: GAGAAACATCAGATCAGGCAATAGAGTCAGAGGGTC...CACGTGATTCTTCTGCACACAGTATTGAAGAGCAACTAGATTAAATTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS TCA 90 bp ACTTGCTTTTTCTGCCTGAATGGTGAGGAATTCTTTCTTCATTCTTaGAGTTCAGGATCTTCATCAGGGTATGTTTTGGTGTCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: TCFFCLNGEEFFLHS*SSGSSSGYVLVSSV
Trigger: AACACTTGACACCAAAACATACCCTGATGAAGATCCTGAACTTCAAGAATGAAGAAAGAATTCCTCACCATTCAGGCAGAAAAAGCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS CCA 90 bp TCTTTCTTCATTCTTGAAGTTCAGGATCTTCATCAGGGTATGTTTTaGTGTCAAGTGTTTTCTGTTGGATTTCTTAGGGCTGTCTGGATA +
Preference number: 5 (lower is better)
Translates to: SFFILEVQDLHQGMF*CQVFSVGFLRAVWI
Trigger: TATCCAGACAGCCCTAAGAAATCCAACAGAAAACACTTGACACCAAAACATACCCTGATGAAGATCCTGAACTTCAAGAATGAAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp ACTCCTAATGACGTTGTGATACAGATAAACAGTCTTAAAATACCATTAGACAGCACTGTAGGGCCAAGTTaGTCTAATACTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: TPNDVVIQINSLKIPLDSTVGPS*SNTGTT
Trigger: TGTGGTTCCAGTATTAGACAAACTTGGCCCTACAGT...GCTGTCTAATGGTATTTTAAGACTGTTTATCTGTATCACAACGTCATTAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp CCAGCTCATCCATCATTGAGTTATTTGGTTCATCTTTCCTATCAAATGGTTTCCCCAGCTCATCCATCATaGAGTTATTTGGTTCATCTT +
Preference number: 5 (lower is better)
Translates to: PAHPSLSYLVHLSYQMVSPAHPS*SYLVHL
Trigger: AAGATGAACCAAATAACTCAATGATGGATGAGCTGG...GGAAACCATTTGATAGGAAAGATGAACCAAATAACTCAATGATGGATGAGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp TATCTATACTGTGACTATAATTTCCAGTTTGACCTTGGTTCACCACCAGCTTTTACTATAATTTCCAGTTaGACCTTGGTTCACCACCAG +
Preference number: 5 (lower is better)
Translates to: YLYCDYNFQFDLGSPPAFTIISS*TLVHHQ
Trigger: CTGGTGGTGAACCAAGGTCAAACTGGAAATTATAGT...AAAAGCTGGTGGTGAACCAAGGTCAAACTGGAAATTATAGTCACAGTATAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS-3UTR CAA 90 bp CCTGCCATCATATTCATACTAATCAGAGAAGGAGATCTATACTCACTGCTCATGAATCCTAAAAATGCTTaGAGCGATGAGAACAAAGTG +
Preference number: 5 (lower is better)
Translates to: PAIIFILIREGDLYSLLMNPKNA*SDENKV
Trigger: CACTTTGTTCTCATCGCTCAAAGCATTTTTAGGATT...CATGAGCAGTGAGTATAGATCTCCTTCTCTGATTAGTATGAATATGATGGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TTAGATGTAGGAGGAAGCTCTGACTATGCCAAGGTTCAGGTTAAGCTGAATTTAAATCCTAAAAATGCTTaGAGCGATGAGAACAAAGTG +
Preference number: 5 (lower is better)
Translates to: LDVGGSSDYAKVQVKLNLNPKNA*SDENKV
Trigger: CACTTTGTTCTCATCGCTCAAAGCATTTTTAGGATT...TAAATTCAGCTTAACCTGAACCTTGGCATAGTCAGAGCTTCCTCCTACATCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440706.3
ENST00000449726.6
CDS-3UTR CAA 90 bp TATCTATACTGTGACTATAATTTCCAGTTTGACCTTGGTTCACCACCAGCTTTTGATTTGACGACTTGGTaGGCAATAATACATTTGAGT +
Preference number: 5 (lower is better)
Translates to: YLYCDYNFQFDLGSPPAFDLTTW*AIIHLS
Trigger: ACTCAAATGTATTATTGCCAACCAAGTCGTCAAATC...AAAAGCTGGTGGTGAACCAAGGTCAAACTGGAAATTATAGTCACAGTATAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS TCA 72 bp AGCTGCCGGTCGCAGGCGGCGCCACGGCGCACCACCTaGACCCTCGACTCGCCGGGCCCGGGACGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: SCRSQAAPRRTT*TLDSPGPGRAR
Trigger: GCGAGCGCGTCCCGGGCCCGGCGAGTCGAGGGTTCAGGTGGTGCGCCGTGGCGCCGCCTGCGACCGGCAGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258679.11
ENST00000622102.4
CDS GCA 72 bp CTACGTGGGTCGGAGGGGCAGCCGAAGCCTCCAAAGTaGGGCGAACGAGCTGCCGGTCGCAGGCGGCGCCAC +
Preference number: 6 (lower is better)
Translates to: LRGSEGQPKPPK*GERAAGRRRRH
Trigger: GTGGCGCCGCCTGCGACCGGCAGCTCGTTCGCCGCACTTTGGAGGCTTCGGCTGCCCCTCCGACCCACGTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258679.11
ENST00000449726.6
ENST00000622102.4
ENST00000649443.1
CDS CCA 72 bp CGCTGTTCACAAGGAGGCCCGGGTCCGGGCCCTACGTaGGTCGGAGGGGCAGCCGAAGCCTCCAAAGTGCGG +
Preference number: 6 (lower is better)
Translates to: RCSQGGPGPGPT*VGGAAEASKVR
Trigger: CCGCACTTTGGAGGCTTCGGCTGCCCCTCCGACCCACGTAGGGCCCGGACCCGGGCCTCCTTGTGAACAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258679.11
ENST00000396257.6
ENST00000396259.5
ENST00000449726.6
ENST00000622102.4
ENST00000649443.1
CDS CCA 72 bp CCTCGGCGCTTGAAGCCCAGCCAGCCGGTGAACCCGTaGGGCGAAGCCGGCACGCTGTTCACAAGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PRRLKPSQPVNP*GEAGTLFTRRP
Trigger: GGGCCTCCTTGTGAACAGCGTGCCGGCTTCGCCCCACGGGTTCACCGGCTGGCTGGGCTTCAAGCGCCGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258679.11
ENST00000396257.6
ENST00000396259.5
ENST00000449726.6
ENST00000622102.4
ENST00000649443.1
CDS TCA 72 bp GTCCTGCAGGCCACTCTGCACCCGCCTGATTCTGAGTaGCAGCCCTCCTGGGCCACCATCAGACATTTGTGT +
Preference number: 6 (lower is better)
Translates to: VLQATLHPPDSE*QPSWATIRHLC
Trigger: ACACAAATGTCTGATGGTGGCCCAGGAGGGCTGTCACTCAGAATCAGGCGGGTGCAGAGTGGCCTGCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622102.4
CDS CCA 72 bp ACTCTGCTGGAGAGGCACAAGCAGCCTTCGGCTGGCTaGAGTTCACAACAGCAGCCCTCCTATCAGCTGAGT +
Preference number: 6 (lower is better)
Translates to: TLLERHKQPSAG*SSQQQPSYQLS
Trigger: ACTCAGCTGATAGGAGGGCTGCTGTTGTGAACTCCAGCCAGCCGAAGGCTGCTTGTGCCTCTCCAGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649443.1
CDS CCA 72 bp CATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTaGAGTTCCGTCTACACCCACATTCCTACACCGCAA +
Preference number: 6 (lower is better)
Translates to: HPQSCLMVHDGF*SSVYTHIPTPQ
Trigger: TTGCGGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396257.6
CDS CCA 72 bp CATCCTCAGAGTTGCCTCATGGTCCATGATGGTTTCTaGAGTTCCGTCTACACCCACATTCCTACACTTAGG +
Preference number: 6 (lower is better)
Translates to: HPQSCLMVHDGF*SSVYTHIPTLR
Trigger: CCTAAGTGTAGGAATGTGGGTGTAGACGGAACTCCAGAAACCATCATGGACCATGAGGCAACTCTGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396259.5
CDS CCA 72 bp ATTCTTGAAGTTCAGGATCTTCATCAGGGTATGTTTTaGTGTCAAGTGTTTTCTGTTGGATTTCTTAGGGCT +
Preference number: 6 (lower is better)
Translates to: ILEVQDLHQGMF*CQVFSVGFLRA
Trigger: AGCCCTAAGAAATCCAACAGAAAACACTTGACACCAAAACATACCCTGATGAAGATCCTGAACTTCAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258679.11
CDS CAA 90 bp TGCTCTGGGTTGATTCAGGCTCACTCAAAAGAGGAAAGTCAGATATaGTTTACTTCCATATTATTTCAAATCCTGAGAAAAACCATTACA +
Preference number: 6 (lower is better)
Translates to: CSGLIQAHSKEESQI*FTSILFQILRKTIT
Trigger: TGTAATGGTTTTTCTCAGGATTTGAAATAATATGGAAGTAAACAATATCTGACTTTCCTCTTTTGAGTGAGCCTGAATCAACCCAGAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498106.1