RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000166689

Ensembl transcript IDs: ENST00000332954.8, ENST00000355661.7, ENST00000525049.5, ENST00000525177.1, ENST00000525581.2, ENST00000525781.5, ENST00000528376.5, ENST00000528637.5, ENST00000529213.1, ENST00000530489.5, ENST00000531066.6, ENST00000531079.1, ENST00000531776.1, ENST00000532079.1, ENST00000533251.1, ENST00000533901.1, ENST00000636090.1, ENST00000636113.1, ENST00000637162.1

Found 1290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCCTCCTAACATACTGAGCCAAGATCTCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCAGGCCCGTCCTCTCCCCTTGGCCCA +
Preference number: 1 (lower is better)
Translates to: APPNILSQDLQGAAG*GSEMRAGPSSPLGP
Trigger: TGGGCCAAGGGGAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTGGAGATCTTGGCTCAGTATGTTAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
3UTR CCA 90 bp ACCCTGAGGCCTCTGCACTGCAAGCCCAGGGAGACCAGTGGCCCTTaGGGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCAT +
Preference number: 1 (lower is better)
Translates to: TLRPLHCKPRETSGP*GRGVTPCSITLTQH
Trigger: ATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCCCCAAGGGCCACTGGTCTCCCTGGGCTTGCAGTGCAGAGGCCTCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR TCA 90 bp TTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGACTaGCTGGGTATTTCCTCAGGCTCCTGGGCCTGTTTGATCCTCACT +
Preference number: 1 (lower is better)
Translates to: FRTPAKAPLHRGWED*LGISSGSWACLILT
Trigger: AGTGAGGATCAAACAGGCCCAGGAGCCTGAGGAAATACCCAGTCAGTCCTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 90 bp TCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGGGGTTTCCTTaGGGGCAGAAAGGTCATCTCCTTGGAGGAAGCTGGTTCCACTGG +
Preference number: 1 (lower is better)
Translates to: SFLRPDSLLSWKGFP*GQKGHLLGGSWFHW
Trigger: CCAGTGGAACCAGCTTCCTCCAAGGAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CCA 90 bp GCAGAAAGGTCATCTCCTTGGAGGAAGCTGGTTCCACTGGGCCCCTaGCTCCAGGCTTCTTTGCATGCTGGGTCACGGGTCAGTCACTGC +
Preference number: 1 (lower is better)
Translates to: AERSSPWRKLVPLGP*LQASLHAGSRVSHC
Trigger: GCAGTGACTGACCCGTGACCCAGCATGCAAAGAAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCTTCCTCCAAGGAGATGACCTTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636090.1
3UTR GCA 90 bp AACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCC +
Preference number: 1 (lower is better)
Translates to: NHVGQWTALSLGGVM*LCLGDSEGHSAPCP
Trigger: GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR GCA 90 bp GAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGCCCTTCCTaGCCCCACAACACCTGTCACCCAGAAGTACCTGAATCTGTACGT +
Preference number: 1 (lower is better)
Translates to: EVIGSWTSLGLPRPS*PHNTCHPEVPESVR
Trigger: ACGTACAGATTCAGGTACTTCTGGGTGACAGGTGTTGTGGGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CCA 90 bp TGGTTCAGGTCACCCTCTGACCAGGCATTCGTCCAGCCTGGGTCGTaGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAA +
Preference number: 1 (lower is better)
Translates to: WFRSPSDQAFVQPGS*TNSPVGCSLNHVGQ
Trigger: TTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGACCCAGGCTGGACGAATGCCTGGTCAGAGGGTGACCTGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 90 bp CACACTGTTGCCCCTAAGCCAAACCCAAGGGGCAAGGCACAGACTTaGGCTCCACGTGTGATCCTCGTGGAGTTTCACACAGAGCTGGTC +
Preference number: 1 (lower is better)
Translates to: HTVAPKPNPRGKAQT*APRVILVEFHTELV
Trigger: GACCAGCTCTGTGTGAAACTCCACGAGGATCACACGTGGAGCCCAAGTCTGTGCCTTGCCCCTTGGGTTTGGCTTAGGGGCAACAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CCA 90 bp TCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCTaGGAACACTCAACAGGCTATGGAGACAAGAACCGCTATTACAAG +
Preference number: 1 (lower is better)
Translates to: SVGLHEEGSRKVSHI*EHSTGYGDKNRYYK
Trigger: CTTGTAATAGCGGTTCTTGTCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 90 bp TCTTCTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTaGGAACACCTCTTTAAATCTCACTTTCTCCTGAGGTCATTGGAA +
Preference number: 1 (lower is better)
Translates to: SSPRQHANQPLAGVY*EHLFKSHFLLRSLE
Trigger: TTCCAATGACCTCAGGAGAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR TCA 90 bp CGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTaGAGTCCCTGTCTACTGTCCAGGTGTAAAGCATGGATTTTTATA +
Preference number: 1 (lower is better)
Translates to: RTTSVLGECIQTCNL*SPCLLSRCKAWIFI
Trigger: TATAAAAATCCATGCTTTACACCTGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 90 bp TTGTGTGATTGGACTACAGGAATTAAAACCGAACAACCTCAGTCTTaGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTAC +
Preference number: 1 (lower is better)
Translates to: LCDWTTGIKTEQPQS*ENVFKRAISEVPVY
Trigger: GTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGTCCAATCACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGGTGTTTGGGGGACTCTaGGGGGCACTCGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGVFGGL*GALGSL
Trigger: CAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACAC...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCGCGGCTGGGAGGACTaGCTGGGTATTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGRGWED*LGISSG
Trigger: GCCTGAGGAAATACCCAGTCAGTCCTCCCAGCCGCG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTTCTCACTGGGAGGTGTaGTGTGCTTGTGTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGSHWEV*CACVWG
Trigger: CCCCCAAACACAAGCACATCACACCTCCCAGTGAGA...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CAA 90 bp CTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGGGGTTTCCTaGGGGGCAGAAAGGTCATCTCCTTGGAGGAAGCTGGTTCCACTG +
Preference number: 2 (lower is better)
Translates to: LLPPAGFPAQLEGVS*GAERSSPWRKLVPL
Trigger: CAGTGGAACCAGCTTCCTCCAAGGAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCT +
Preference number: 2 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGLGGVM*LCLGDS
Trigger: AGAGTCCCCCAAACACAAGCACATCACACCTCCCAG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR GCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGGACTAGCCTCGGCTTaGCCCGCCCTTCCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWGLASA*PALPAP
Trigger: GGGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGGCATTCGTCCAGCCTaGGTCGTGGACAAACAGCCC +
Preference number: 2 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIGIRPA*VVDKQP
Trigger: GGGCTGTTTGTCCACGACCCAGGCTGGACGAATGCC...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGGGCCTGGCCTGTGGTaGACACCCGCAGTCGGTAAG +
Preference number: 2 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASGPGLW*TPAVGK
Trigger: CTTACCGACTGCGGGTGTTCACCACAGGCCAGGCCC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATCCGCAGTCGGTAAGCTaGTCCTTCCTCCGGCCGGAT +
Preference number: 2 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDPQSVS*SFLRPD
Trigger: ATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGG...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGATTCCCTGCTCAGCTaGAAGGGGTTTCCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSDSLLS*KGFPWG
Trigger: CCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGTGCATATTAGGGCCTaGCCTGTGGTGAACACCCGC +
Preference number: 2 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSVHIRA*PVVNTR
Trigger: GCGGGTGTTCACCACAGGCCAGGCCCTAATATGCAC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATCCTGGGGGCAGGTTGTaGGCCCCAGTCCTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDPGGRL*APVLLN
Trigger: GTTCAAGAGGACTGGGGCCCACAACCTGCCCCCAGG...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGGGCCTGGCCTGTGGTaGACACCCGCAGTCGGTAAG +
Preference number: 2 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSGPGLW*TPAVGK
Trigger: CTTACCGACTGCGGGTGTTCACCACAGGCCAGGCCC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCCTGCCACCAGACCTaGGTCCCAGGGAAGCCAATC +
Preference number: 2 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESCHQT*VPGKPI
Trigger: GATTGGCTTCCCTGGGACTCAGGTCTGGTGGCAGGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCCGGCCGGATTCCCTaGTCAGCTGGAAGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESGRIP*SAGRGF
Trigger: GAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCGGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCCAGGCTTCTTTGCATaGTGGGTCACGGGTCAGTCA +
Preference number: 2 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSPGFFA*WVTGQS
Trigger: TGACTGACCCGTGACCCAGCATGCAAAGAAGCCTGG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636090.1
3UTR-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCTCCTTGGAGGAAGCTaGTTCCACTGGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASLLGGS*FHWAPG
Trigger: GCCAGGGGCCCAGTGGAACCAGCTTCCTCCAAGGAG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGAGGTCATTGGAAGTTaGACTAGCCTCGGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSEVIGS*TSLGLP
Trigger: GGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CAA 90 bp CTGTGGCGTCAGGCAGCAGGTTGGCTCAGGCTTGTGGGGTGGCTTTaGGGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGC +
Preference number: 2 (lower is better)
Translates to: LWRQAAGWLRLVGWL*GQVNYESVGLHEEG
Trigger: GCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCCCAAAAGCCACCCCACAAGCCTGAGCCAACCTGCTGCCTGACGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCCGCAGTCGGTAAGCTaGTCCTTCCTCCGGCCGGAT +
Preference number: 2 (lower is better)
Translates to: KSHFLLRSLEVGLASACPPQSVS*SFLRPD
Trigger: ATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATGTTCCACTGGGCCCCTaGCTCCAGGCTTCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDVPLGP*LQASLH
Trigger: ATGCAAAGAAGCCTGGAGCCAGGGGCCCAGTGGAAC...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGTTCCACTGGGCCCCTaGCTCCAGGCTTCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEVPLGP*LQASLH
Trigger: ATGCAAAGAAGCCTGGAGCCAGGGGCCCAGTGGAAC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGGAAGCTGGTTCCACTaGGCCCCTGGCTCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPGSWFH*APGSRL
Trigger: AAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCTTCC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGGAAGCTGGTTCCACTaGGCCCCTGGCTCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSGSWFH*APGSRL
Trigger: AAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCTTCC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCTCCTTGGAGGAAGCTaGTTCCACTGGGCCCCTGGC +
Preference number: 2 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWLLGGS*FHWAPG
Trigger: GCCAGGGGCCCAGTGGAACCAGCTTCCTCCAAGGAG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCGTGTTTGGGGGACTCTaGGGGGCACTCGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIVFGGL*GALGSL
Trigger: CAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACAC...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAGTTCAGGTCACCCTCTaGCCAGGCATTCGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEVQVTL*PGIRPA
Trigger: GGCTGGACGAATGCCTGGTCAGAGGGTGACCTGAAC...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGACAATCCCAGACACCCTaGGGCCTCTGCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRQSQTP*GLCTAS
Trigger: GCTTGCAGTGCAGAGGCCTCAGGGTGTCTGGGATTG...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATCTTGGGCTCCACGTGTaGTCCTCGTGGAGTTTCACA +
Preference number: 2 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDLGLHV*SSWSFT
Trigger: TGTGAAACTCCACGAGGATCACACGTGGAGCCCAAG...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGTGTTTGGGGGACTCTaGGGGGCACTCGGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELVFGGL*GALGSL
Trigger: CAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACAC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCATCCTCAACCTTCCTaGCACTCAGCCCTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSHPQPS*HSALEG
Trigger: CCCCTCAAGGGCTGAGTGGCAGGAAGGTTGAGGATG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCTTGCCCCGCCCTTCCTaGCCCCACAACACCTGTCAC +
Preference number: 2 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFLPRPS*PHNTCH
Trigger: GTGACAGGTGTTGTGGGGGCAGGAAGGGCGGGGCAA...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACCAGGAGGCAGAGGTTaGAGTGAACCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPPGGRG*SEPRSC
Trigger: GCACGATCTCGGTTCACTGCAACCTCTGCCTCCTGG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGGGCTCCAGGCTTCTTTaGATGCTGGGTCACGGGTCA +
Preference number: 2 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVGSRLL*MLGHGS
Trigger: TGACCCGTGACCCAGCATGCAAAGAAGCCTGGAGCC...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636090.1
3UTR-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGACAAGAGCCTTTTGCTaGAGGAAGCCTGGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWTRAFC*RKPGGR
Trigger: CCTGCCCCCAGGCTTCCTCCAGCAAAAGGCTCTTGT...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCAATCCCAGACACCCTaGGGCCTCTGCACTGCAAGC +
Preference number: 2 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIQSQTP*GLCTAS
Trigger: GCTTGCAGTGCAGAGGCCTCAGGGTGTCTGGGATTG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGCAGCTGCAAAGTCCTaGATCCTCAACCTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: KSHFLLRSLEVGLASACPAAAKS*ILNLPA
Trigger: GGCAGGAAGGTTGAGGATGCAGGACTTTGCAGCTGC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGCAGCTGCAAAGTCCTaGATCCTCAACCTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSAAAKS*ILNLPA
Trigger: GGCAGGAAGGTTGAGGATGCAGGACTTTGCAGCTGC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAGCTGGGAGGACTGACTaGGTATTTCCTCAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRAGRTD*VFPQAP
Trigger: AGGAGCCTGAGGAAATACCCAGTCAGTCCTCCCAGC...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGGCTTCTTTGCATGCTaGGTCACGGGTCAGTCACTG +
Preference number: 2 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSGFFAC*VTGQSL
Trigger: CAGTGACTGACCCGTGACCCAGCATGCAAAGAAGCC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636090.1
3UTR CAA 90 bp CACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGCTGATCAGTTaGCTTGTGCTTCTAACCAAATCATGTCACCATCTTCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: HPHTASAGRSGRLIS*LVLLTKSCHHLPPL
Trigger: GAGAGGAGGAAGATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACCAGACCTCTGCCAATaGCTGTGGCGTCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELPDLCQ*LWRQAA
Trigger: TGCTGCCTGACGCCACAGTCATTGGCAGAGGTCTGG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCTCACCCAGAAGTACCTaGATCTGTACGTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: KSHFLLRSLEVGLASACPSPRST*ICTCSC
Trigger: GCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGA...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTCACCCAGAAGTACCTaGATCTGTACGTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWSPRST*ICTCSC
Trigger: GCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACCAACCTCACCAACATaGAGAAACCCCCGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPPTSPT*RNPRLY
Trigger: GTAGAGACGGGGGTTTCTTCATGTTGGTGAGGTTGG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGAAGGGGTTTCCTTaGGGGCAGAAAGGTCATCTC +
Preference number: 2 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVWKGFP*GQKGHL
Trigger: GAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGATTCCCTGCTCAGCTaGAAGGGGTTTCCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFDSLLS*KGFPWG
Trigger: CCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCGTTCAGGTCACCCTCTaGCCAGGCATTCGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSVQVTL*PGIRPA
Trigger: GGCTGGACGAATGCCTGGTCAGAGGGTGACCTGAAC...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
3UTR-3UTR GCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGCTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCT +
Preference number: 2 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVLGGVM*LCLGDS
Trigger: AGAGTCCCCCAAACACAAGCACATCACACCTCCCAG...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCGCTGGGAGGACTGACTaGGTATTTCCTCAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIAGRTD*VFPQAP
Trigger: AGGAGCCTGAGGAAATACCCAGTCAGTCCTCCCAGC...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGATCTGCTGGCAGGTCTaGGAGGCTGATCAGTTTGCT +
Preference number: 2 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVICWQV*EADQFA
Trigger: AGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGAT...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAACGCGGCTGGGAGGACTaGCTGGGTATTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQRGWED*LGISSG
Trigger: GCCTGAGGAAATACCCAGTCAGTCCTCCCAGCCGCG...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
3UTR-3UTR CCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAAACCATGTAGGTCAATaGACAGCTCTCTCACTGGGA +
Preference number: 2 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSENHVGQ*TALSLG
Trigger: TCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTT...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGATTTCCTCAGGCTCCTaGGCCTGTTTGATCCTCACT +
Preference number: 2 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVISSGS*ACLILT
Trigger: AGTGAGGATCAAACAGGCCCAGGAGCCTGAGGAAAT...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTATTTCCTCAGGCTCCTaGGCCTGTTTGATCCTCACT +
Preference number: 2 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCISSGS*ACLILT
Trigger: AGTGAGGATCAAACAGGCCCAGGAGCCTGAGGAAAT...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCTTGCTGGAGTCTACTaGGAACACCTCTTTAAATCT +
Preference number: 2 (lower is better)
Translates to: WKSNQSPAIMALLAAGHELAGVY*EHLFKS
Trigger: AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATAGATGTCACCCAGTGTaGAGTTTATTGCTACGATAC +
Preference number: 2 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDRCHPV*SLLLRY
Trigger: GTATCGTAGCAATAAACTCCACACTGGGTGACATCT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGGGCCATGAGGGATGGTaGGGGCACACTGCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLGHEGW*GHTAAL
Trigger: GAGGGCAGCAGTGTGCCCCCACCATCCCTCATGGCC...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CAA 90 bp AGGTTTGCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTaGGTGTCTGAGCTAGCAGCTGCAGAGAGGCCCTCTGAATACACA +
Preference number: 2 (lower is better)
Translates to: RFAAFKDMNVLGLTP*VSELAAAERPSEYT
Trigger: TGTGTATTCAGAGGGCCTCTCTGCAGCTGCTAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAGTTCAGGTCACCCTCTaGCCAGGCATTCGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQVQVTL*PGIRPA
Trigger: GGCTGGACGAATGCCTGGTCAGAGGGTGACCTGAAC...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAGGATTAGAGAGGCAATaGGCGGTAACACTAAAAGCA +
Preference number: 2 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRGLERQ*AVTLKA
Trigger: TGCTTTTAGTGTTACCGCTCATTGCCTCTCTAATCC...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCTACCCCTTTGGTGTCTaGGCTAGCAGCTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSYPFGV*ASSCRE
Trigger: CTCTCTGCAGCTGCTAGCTCAGACACCAAAGGGGTA...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
3UTR-3UTR TCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGAATCTCACTTTCTCCTaGGGTCATTGGAAGTTGGAC +
Preference number: 2 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVNLTFS*GHWKLD
Trigger: GTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATT...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAGGCATTCGTCCAGCCTaGGTCGTGGACAAACAGCCC +
Preference number: 2 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQGIRPA*VVDKQP
Trigger: GGGCTGTTTGTCCACGACCCAGGCTGGACGAATGCC...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCACTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCT +
Preference number: 2 (lower is better)
Translates to: SWENVFKRAISEVPVYCPLGGVM*LCLGDS
Trigger: AGAGTCCCCCAAACACAAGCACATCACACCTCCCAG...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGGCATTCGTCCAGCCTaGGTCGTGGACAAACAGCCC +
Preference number: 2 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRGIRPA*VVDKQP
Trigger: GGGCTGTTTGTCCACGACCCAGGCTGGACGAATGCC...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCATCTGCTGGCAGGTCTaGGAGGCTGATCAGTTTGCT +
Preference number: 2 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSICWQV*EADQFA
Trigger: AGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGAT...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
3UTR-3UTR CCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAATCTGCTGGCAGGTCTaGGAGGCTGATCAGTTTGCT +
Preference number: 2 (lower is better)
Translates to: SWENVFKRAISEVPVYCPICWQV*EADQFA
Trigger: AGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGAT...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGCCATTATGGCCCTGCTaGCGGCAGGCCATGAGGGAT +
Preference number: 2 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLPLWPC*RQAMRD
Trigger: ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGG...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAAAGGAGCTTGTGCAATaGATTAGGGAAAGAACAATC +
Preference number: 2 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRKELVQ*IRERTI
Trigger: GATTGTTCTTTCCCTAATTCATTGCACAAGCTCCTT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATAACCATGTAGGTCAATaGACAGCTCTCTCACTGGGA +
Preference number: 2 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHNHVGQ*TALSLG
Trigger: TCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTT...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTTCTCACTGGGAGGTGTaGTGTGCTTGTGTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: IKTEQPQSWENVFKRAISSHWEV*CACVWG
Trigger: CCCCCAAACACAAGCACATCACACCTCCCAGTGAGA...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTATGCAGAGAGGCCCTCTaGATACACAGTATATTTTGC +
Preference number: 2 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELCREAL*IHSIFC
Trigger: GCAAAATATACTGTGTATTCAGAGGGCCTCTCTGCA...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGCTTGGGCTCCACGTGTaGTCCTCGTGGAGTTTCACA +
Preference number: 2 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLLGLHV*SSWSFT
Trigger: TGTGAAACTCCACGAGGATCACACGTGGAGCCCAAG...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCACACTCAACAGGCTATaGAGACAAGAACCGCTATTA +
Preference number: 2 (lower is better)
Translates to: NYESVGLHEEGSRKVSHITLNRL*RQEPLL
Trigger: TAATAGCGGTTCTTGTCTCCATAGCCTGTTGAGTGT...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACAGTGTGGAGTTTATTaGTACGATACAATGAAAGTT +
Preference number: 2 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPQCGVY*YDTMKV
Trigger: AACTTTCATTGTATCGTAGCAATAAACTCCACACTG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCAGTGTGGAGTTTATTaGTACGATACAATGAAAGTT +
Preference number: 2 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWQCGVY*YDTMKV
Trigger: AACTTTCATTGTATCGTAGCAATAAACTCCACACTG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAACACTCAACAGGCTATaGAGACAAGAACCGCTATTA +
Preference number: 2 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELTLNRL*RQEPLL
Trigger: TAATAGCGGTTCTTGTCTCCATAGCCTGTTGAGTGT...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTGGAAGGGGTTTCCTTaGGGGCAGAAAGGTCATCTC +
Preference number: 2 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLWKGFP*GQKGHL
Trigger: GAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGTGCATATTAGGGCCTaGCCTGTGGTGAACACCCGC +
Preference number: 2 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSVHIRA*PVVNTR
Trigger: GCGGGTGTTCACCACAGGCCAGGCCCTAATATGCAC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCAAGCAAAGGAGCTTGTaGAATGAATTAGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIKQRSL*NELGKE
Trigger: TTCTTTCCCTAATTCATTGCACAAGCTCCTTTGCTT...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTCTCAGGCTTGTGGGGTaGCTTTTGGGACAAGTGAAT +
Preference number: 2 (lower is better)
Translates to: IKTEQPQSWENVFKRAISLRLVG*LLGQVN
Trigger: ATTCACTTGTCCCAAAAGCCACCCCACAAGCCTGAG...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGAGTTTCACACAGAGCTaGTCATCAGGTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLSFTQS*SSGQGQ
Trigger: CTGTCCCTGACCTGATGACCAGCTCTGTGTGAAACT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CAA 90 bp AGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGAGTTTATaGCTACGATACAATGAAAGTTGCTTCCTCTCACCTTTTCTGTAT +
Preference number: 2 (lower is better)
Translates to: RGKGFLGRCHPVWSL*LRYNESCFLSPFLY
Trigger: ATACAGAAAAGGTGAGAGGAAGCAACTTTCATTGTATCGTAGCAATAAACTCCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR GCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGATCTGTACGTGCAGCTaGAAAGTCCTGCATCCTCAA +
Preference number: 2 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLICTCS*KVLHPQ
Trigger: TTGAGGATGCAGGACTTTGCAGCTGCACGTACAGAT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAAAAGGTGAGTCACATCTaGGAACACTCAACAGGCTAT +
Preference number: 2 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQKVSHI*EHSTGY
Trigger: ATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTT...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
3UTR-3UTR TCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTACAGCTTTTAAAGATATaGATGTCCTGGGCCTTACCC +
Preference number: 2 (lower is better)
Translates to: THFLTRSQMLQIETSPHLQLLKI*MSWALP
Trigger: GGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTG...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
3UTR-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAAGGTTTAGGGAAACATaGGATTTCAAACAACAGGGA +
Preference number: 2 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQRFRET*DFKQQG
Trigger: TCCCTGTTGTTTGAAATCCCATGTTTCCCTAAACCT...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR TCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTAAGGAGCTTGTGCAATaGATTAGGGAAAGAACAATC +
Preference number: 2 (lower is better)
Translates to: IKTEQPQSWENVFKRAISKELVQ*IRERTI
Trigger: GATTGTTCTTTCCCTAATTCATTGCACAAGCTCCTT...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTAGGTTTAGGGAAACATaGGATTTCAAACAACAGGGA +
Preference number: 2 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRRFRET*DFKQQG
Trigger: TCCCTGTTGTTTGAAATCCCATGTTTCCCTAAACCT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR GCA 72 bp GGCCTGGCCTGTGGTGAACACCCGCAGTCGGTAAGCTaGTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: GLACGEHPQSVS*SFLRPDSLLSW
Trigger: CCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGGTGTTCACCACAGGCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR TCA 72 bp AACATACTGAGCCAAGATCTCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCAGGCCCGTCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: NILSQDLQGAAG*GSEMRAGPSSP
Trigger: GGGAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTGGAGATCTTGGCTCAGTATGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
3UTR-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGCTCCTGGGCCTGTTaGATCCTCACTCCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSGSWAC*ILTPAL
Trigger: CAGAGCTGGAGTGAGGATCAAACAGGCCCAGGAGCC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTGGACTAGCCTCGGCTaGCCCCGCCCTTCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEWTSLG*PRPSCP
Trigger: GGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCCA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR TCA 72 bp CCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGACTaGCTGGGTATTTCCTCAGGCTCCTGGGCCTGTTTG +
Preference number: 3 (lower is better)
Translates to: PAKAPLHRGWED*LGISSGSWACL
Trigger: CAAACAGGCCCAGGAGCCTGAGGAAATACCCAGTCAGTCCTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR GCA 72 bp TCCCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTaGAAAGGCCCCTCTCCATCGCGGCTGGGAGGACTG +
Preference number: 3 (lower is better)
Translates to: SQVLNSAEIPNA*KGPSPSRLGGL
Trigger: CAGTCCTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 72 bp CGGCCGGATTCCCTGCTCAGCTGGAAGGGGTTTCCTTaGGGGCAGAAAGGTCATCTCCTTGGAGGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: RPDSLLSWKGFP*GQKGHLLGGSW
Trigger: CCAGCTTCCTCCAAGGAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CAA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTGGACTAGCCTCGGCTaGCCCCGCCCTTCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWWTSLG*PRPSCP
Trigger: GGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCCA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CCA 72 bp TCACCCTCTGACCAGGCATTCGTCCAGCCTGGGTCGTaGACAAACAGCCCCGTGGGGTGTTCTCTGAACCAT +
Preference number: 3 (lower is better)
Translates to: SPSDQAFVQPGS*TNSPVGCSLNH
Trigger: ATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGACCCAGGCTGGACGAATGCCTGGTCAGAGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 72 bp TGTGGGGCTGGAAGTCAAATCAAAGTCCTGCCATTATaGCCCTGCTGGCGGCAGGCCATGAGGGATGGTGGG +
Preference number: 3 (lower is better)
Translates to: CGAGSQIKVLPL*PCWRQAMRDGG
Trigger: CCCACCATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCAGCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGGCAAGGCACAGACTaGGGCTCCACGTGTGATCCT +
Preference number: 3 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEGQGTD*GSTCDP
Trigger: AGGATCACACGTGGAGCCCAAGTCTGTGCCTTGCCC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR GCA 72 bp GGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCT +
Preference number: 3 (lower is better)
Translates to: GQWTALSLGGVM*LCLGDSEGHSA
Trigger: AGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000532079.1
ENST00000636113.1
3UTR-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATACGCCAACCAGCCTCTaGCTGGAGTCTACTGGGAAC +
Preference number: 3 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDTPTSL*LESTGN
Trigger: GTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR TCA 72 bp CCTCCTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTaGATTCAGCCGAGATTCCGAACGCCTGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: PPLLSEPCIPRS*IQPRFRTPAKA
Trigger: GGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACGGAGGTGTGATGTGCTaGTGTTTGGGGGACTCTGAG +
Preference number: 3 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDGGVMC*CLGDSE
Trigger: CTCAGAGTCCCCCAAACACAAGCACATCACACCTCC...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 72 bp AGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATaGACAGCTCTCTCACTGGGAGGTGTGATGTGCTTG +
Preference number: 3 (lower is better)
Translates to: SPVGCSLNHVGQ*TALSLGGVMCL
Trigger: CAAGCACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTGGAGGTGTGATGTGCTaGTGTTTGGGGGACTCTGAG +
Preference number: 3 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAGGVMC*CLGDSE
Trigger: CTCAGAGTCCCCCAAACACAAGCACATCACACCTCC...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCTGGAAGGGGTTTCCTaGGGGGCAGAAAGGTCATCT +
Preference number: 3 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASLEGVS*GAERSS
Trigger: AGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTCTGACAAGAGCCTTTaGCTGGAGGAAGCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVSDKSL*LEEAWG
Trigger: CCCCCAGGCTTCCTCCAGCAAAAGGCTCTTGTCAGA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CCA 72 bp GCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTaGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAA +
Preference number: 3 (lower is better)
Translates to: APSPSHSICWQV*EADQFACASNQ
Trigger: TTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCCTGCCACTCAGCCCTaGAGGGGAACATTAGAAAAT +
Preference number: 3 (lower is better)
Translates to: KSHFLLRSLEVGLASACPPATQP*RGTLEN
Trigger: ATTTTCTAATGTTCCCCTCAAGGGCTGAGTGGCAGG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTTTCTCCTGAGGTCATaGGAAGTTGGACTAGCCTCG +
Preference number: 3 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVFLLRS*EVGLAS
Trigger: CGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CCA 72 bp AGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTaGGAACACCTCTTTAAATCTCACTTTCTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: RQHANQPLAGVY*EHLFKSHFLLR
Trigger: CCTCAGGAGAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CAA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATGGAGGTGTGATGTGCTaGTGTTTGGGGGACTCTGAG +
Preference number: 3 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHGGVMC*CLGDSE
Trigger: CTCAGAGTCCCCCAAACACAAGCACATCACACCTCC...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAAGGCTCCTGGGCCTGTTaGATCCTCACTCCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQGSWAC*ILTPAL
Trigger: CAGAGCTGGAGTGAGGATCAAACAGGCCCAGGAGCC...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
3UTR-3UTR CAA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCAGAAAGGTCATCTCCTaGGAGGAAGCTGGTTCCACT +
Preference number: 3 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFRKVIS*EEAGST
Trigger: AGTGGAACCAGCTTCCTCCAAGGAGATGACCTTTCT...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CAA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGACCGAGATCGTGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLTEIVP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCACGATCTCGGT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR-3UTR CAA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGGGAGGCTGATCAGTTaGCTTGTGCTTCTAACCAAA +
Preference number: 3 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELGRLIS*LVLLTK
Trigger: TTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGACGCCAACCAGCCTCTaGCTGGAGTCTACTGGGAAC +
Preference number: 3 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLTPTSL*LESTGN
Trigger: GTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR TCA 72 bp TCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTaGAGTCCCTGTCTACTGTCCAGGTGTAAAGCATGG +
Preference number: 3 (lower is better)
Translates to: SVLGECIQTCNL*SPCLLSRCKAW
Trigger: CCATGCTTTACACCTGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR TCA 72 bp TTCTGTAAACACAATCAGGCAGGATTAGAGAGGCAATaGGCGGTAACACTAAAAGCAAAGGAGCTTGTGCAA +
Preference number: 3 (lower is better)
Translates to: FCKHNQAGLERQ*AVTLKAKELVQ
Trigger: TTGCACAAGCTCCTTTGCTTTTAGTGTTACCGCTCATTGCCTCTCTAATCCTGCCTGATTGTGTTTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGGGAGGCTGATCAGTTaGCTTGTGCTTCTAACCAAA +
Preference number: 3 (lower is better)
Translates to: IKTEQPQSWENVFKRAISGRLIS*LVLLTK
Trigger: TTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CCA 72 bp TGGACTACAGGAATTAAAACCGAACAACCTCAGTCTTaGGAGAATGTATTCAAACGTGCAATCTCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: WTTGIKTEQPQS*ENVFKRAISEV
Trigger: GACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTAGAAAGGTCATCTCCTaGGAGGAAGCTGGTTCCACT +
Preference number: 3 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSRKVIS*EEAGST
Trigger: AGTGGAACCAGCTTCCTCCAAGGAGATGACCTTTCT...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR TCA 72 bp ATGTCACCCAGTGTGGAGTTTATTGCTACGATACAATaGAAGTTGCTTCCTCTCACCTTTTCTGTATTTCAA +
Preference number: 3 (lower is better)
Translates to: MSPSVEFIATIQ*KLLPLTFSVFQ
Trigger: TTGAAATACAGAAAAGGTGAGAGGAAGCAACTTTCATTGTATCGTAGCAATAAACTCCACACTGGGTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCCGTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCACGTGGACCCCGAGTTaGCGGGCTCCCCGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: PVLSPWPSVLLRSRTRAFTWTPS*RAPRCA
Trigger: CGCGCACCGGGGAGCCCGTCAACTCGGGGTCCACGT...GAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGTGGCGCCCTCCTCCGTaGAGCCCTCCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGWRPPP*SPPPSR
Trigger: GCGGCTGGGAGGAGGGCTTCACGGAGGAGGGCGCCA...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGTGGGCGCTGTGGGGCTaGCGTGCCGGAACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGWALWG*RAGTAG
Trigger: GCCAGCAGTTCCGGCACGGCAGCCCCACAGCGCCCA...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGGGCCATGTCCCCGCTaGGGGTCGCCAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEGPCPR*GSPAQA
Trigger: AGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGQGAAG*GSEMRA
Trigger: TGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTG...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCCGTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCGTGTTTGGGGGACTCTaGGGGGCACTCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PVLSPWPSVLLRSRTRAFVFGGL*GALGSL
Trigger: CAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACAC...GAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp CTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGCTGCTCTCCCCGGTGCGCGGATaGAGCCAGGTCGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LALSDQGLLVSLHALQLLSPVRG*SQVVQR
Trigger: CCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGA...GAGCAGCTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp CCCGTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PVLSPWPSVLLRSRTRAFSLVIP*VQALQG
Trigger: GCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGA...GAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp GGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GPVSSCALGPGPSGVASCQGAAG*GSEMRA
Trigger: TGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTG...GCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGTCATGTGGCCCGAGTTaGCGGGCTCCCCGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRSCGPS*RAPRCA
Trigger: CGCGCACCGGGGAGCCCGTCAACTCGGGCCACATGA...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACCTGACTGCTCGGCCTaGGAGCCCGCTGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEPDCSA*EPAVEL
Trigger: CAGCTCCACAGCGGGCTCTCAGGCCGAGCAGTCAGG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGGGCCCAGTGTCCTCTTaGGCTCTCGGACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VLSPWPSVLLRSRTRAFWGPVSS*ALGPGP
Trigger: AGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC...CCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGAGAGCTGCCACACGGTaGCATCCCGGTGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRRAATR*HPGAPG
Trigger: GCCGGGCGCACCGGGATGGCACCGTGTGGCAGCTCT...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTTGGGCGCTGTGGGGCTaGCGTGCCGGAACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSWALWG*RAGTAG
Trigger: GCCAGCAGTTCCGGCACGGCAGCCCCACAGCGCCCA...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGGGGGCACCTCTAGCATaGTCCTGCTCCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGGAPLA*SCSGPG
Trigger: ACCAGGGCCGGAGCAGGAGCATGCTAGAGGTGCCCC...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp GTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGGACCCCTCCGGAGTGTaGCGTAGGGAGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: VLSPWPSVLLRSRTRAFWDPSGV*RREQWW
Trigger: CCACCATTGCTCCCTACGTCACACTCCGGAGGGGTC...CCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGACGGTGCCATCCCGGTaGGCCCGGCGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWETVPSR*ARRSSL
Trigger: GAGTGAAGAGCGCCGGGCGCACCGGGATGGCACCGT...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCTGCCGTGCCGGAACTaGTGGCGCTGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWELPCRN*WRCCHS
Trigger: CGAGTGGCAGCAGCGCCAGCAGTTCCGGCACGGCAG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGCGGACCAGGGCCTTCTaGTGTCGCTTCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGRTRAF*CRFMRS
Trigger: GGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCG...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGCGTCAGGCAGCAGGTTaGCTCAGGCTTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGRQAAG*LRLVGW
Trigger: CCACCCCACAAGCCTGAGCCAACCTGCTGCCTGACG...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATCTTGGGTCCAGGCTTaGCCTCCAGGGTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLESWVQA*PPGWRR
Trigger: CCGCCTCCACCCTGGAGGCCAAGCCTGGACCCAAGA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATGTGACTCGCTCTGCTaGTGTGTGTGGCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLECDSLC*CVWPPG
Trigger: CCCCGGCGGCCACACACACCAGCAGAGCGAGTCACA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGGGTCCGCACAGGGCTaGTGGGAGGACTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEGSAQG*WEDWAV
Trigger: CACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACGTCTGACTGCCGCTTaGGGCCCCGCACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLERLTAA*GPAQMC
Trigger: ACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGGGCCATGTCCCCGCTaGGGGTCGCCAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIGPCPR*GSPAQA
Trigger: AGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCC...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLESLVIP*VQALQG
Trigger: GCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp TGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGGCTGAGGTAGCGAGATaGGGGCAGGCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CPLALSDQGLLVSLHALQAEVAR*GQARPL
Trigger: GAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGC...CTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGCTGAGGTAGCGAGATaGGGGCAGGCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSAEVAR*GQARPL
Trigger: GAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGTGTTTGGGGGACTCTaGGGGGCACTCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSVFGGL*GALGSL
Trigger: CAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACAC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGCCAGACCTCTGCCAATaGCTGTGGCGTCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGPDLCQ*LWRQAA
Trigger: TGCTGCCTGACGCCACAGTCATTGGCAGAGGTCTGG...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCGACTGCTGGAGCCTTaGCGTGGACCCCGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: AQCPLALSDQGLLVSLHARLLEP*RGPRVD
Trigger: GTCAACTCGGGGTCCACGTCAAGGCTCCAGCAGTCG...CGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATCCCCATTCACACACTaGCCCAGCTCCCGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLESPFTH*PSSRSR
Trigger: GCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGGGA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGCTGCTCCTGTCCCTGCCCCGCTaGCTGGCCCCTCCTAACATA +
Preference number: 4 (lower is better)
Translates to: LALSDQGLLVSLHALQLLLSLPR*LAPPNI
Trigger: TATGTTAGGAGGGGCCAGGCAGCGGGGCAGGGACAG...GAGCAGCTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGTCCCTGCCCCGCTaGCTGGCCCCTCCTAACATA +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGLSLPR*LAPPNI
Trigger: TATGTTAGGAGGGGCCAGGCAGCGGGGCAGGGACAG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGTGCTCCGGTCCCGCTTaGCCTCCAGTGGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRCSGPA*PPVGPS
Trigger: AGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCA...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCACTGTGACTCGCTCTaGTGGTGTGTGTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGHCDSL*WCVWPP
Trigger: CGGCGGCCACACACACCAGCAGAGCGAGTCACAGTG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACCGCAGTCGGTAAGCTaGTCCTTCCTCCGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEPQSVS*SFLRPD
Trigger: ATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCTGCCTGGCAGCGTCTaGTACCTGCTCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPLPGSV*YLLSGP
Trigger: GGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGCCGGACCAGGGCCTTCTaGTGTCGCTTCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: VLLRSRTRAFWCRFMRSSRTRAF*CRFMRS
Trigger: GGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCG...GCTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGCTGGTCGGTGAACTCTaGGGAGCCAAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGLVGEL*GAKADG
Trigger: CCCATCTGCCTTGGCTCCCCAGAGTTCACCGACCAG...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGGGGAGGACTGGGCTGTaGGGGCGGCTTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRGRTGL*GRLALR
Trigger: TCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCC...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGTTTCCTCAGCTGGGGTaGGTGAGGTCGGTACGGCAC +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGFPQLG*VRSVRH
Trigger: GTGCCGTACCGACCTCACCCACCCCAGCTGAGGAAA...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGATGGTGGACGACTGCTaGAGCCTTGACGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: VLSPWPSVLLRSRTRAFWMVDDC*SLDVDP
Trigger: GGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCAT...CCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCGTCTGACTGCCGCTTaGGGCCCCGCACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWERLTAA*GPAQMC
Trigger: ACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGACCCCTCCGGAGTGTaGCGTAGGGAGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPDPSGV*RREQWW
Trigger: CCACCATTGCTCCCTACGTCACACTCCGGAGGGGTC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000532079.1
ENST00000636113.1
CDS-3UTR TCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGTCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWESLVIP*VQALQG
Trigger: GCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGA...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAATCTTGCCTCGCTGGTaGTCCCCTGAGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEILPRW*SPEYRR
Trigger: GCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGAT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGTTCAGGTCACCCTCTaGCCAGGCATTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGVQVTL*PGIRPA
Trigger: GGCTGGACGAATGCCTGGTCAGAGGGTGACCTGAAC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCGCGGCTGGGAGGACTaGCTGGGTATTTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWERGWED*LGISSG
Trigger: GCCTGAGGAAATACCCAGTCAGTCCTCCCAGCCGCG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCTCCGGCCCTGGTCGGTaGACTCTGGGGAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSISGPGR*TLGSQG
Trigger: GCCTTGGCTCCCCAGAGTTCACCGACCAGGGCCGGA...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCATGAGATGAGTTCTTaGCAGCGTGGCCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGHEMSS*QRGPVP
Trigger: GGGCACGGGGCCACGCTGTCAAGAACTCATCTCATG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGTCCCCATTCACACACTaGCCCAGCTCCCGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWESPFTH*PSSRSR
Trigger: GCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGGGA...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTTCCCCATTCACACACTaGCCCAGCTCCCGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSSPFTH*PSSRSR
Trigger: GCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGGGA...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEAASGT*SQGPQV
Trigger: GACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGACCCTGAGAGCCCTCTaGCTGGCAGCGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWETLRAL*LAASGT
Trigger: GGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGT...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCTGTCCCTGCCCCGCTaGCTGGCCCCTCCTAACATA +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWELSLPR*LAPPNI
Trigger: TATGTTAGGAGGGGCCAGGCAGCGGGGCAGGGACAG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCTGTCCCTGCCCCGCTaGCTGGCCCCTCCTAACATA +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPLSLPR*LAPPNI
Trigger: TATGTTAGGAGGGGCCAGGCAGCGGGGCAGGGACAG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000532079.1
ENST00000636113.1
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGCCTGGGGGACAGCCTaGCGCTCCACCTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSAWGTA*RSTFSI
Trigger: TATGGAGAAGGTGGAGCGGCAGGCTGTCCCCCAGGC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCTGCCGTGCCGGAACTaGTGGCGCTGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSLPCRN*WRCCHS
Trigger: CGAGTGGCAGCAGCGCCAGCAGTTCCGGCACGGCAG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSRGVGA*EVLHLP
Trigger: AGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGCTGGAGCCTTGACGTaGACCCTGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSAGALT*TLRALC
Trigger: GCAGAGGGCTCTCAGGGTCCACGTCAAGGCTCCAGC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTTTCTTCTCTGCCCGTTaGGGCTGTGCCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGFFSAR*GCACWP
Trigger: AGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAA...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGGAGGAAAGGCCCGCTaGTACCCACCAGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGGGKAR*YPPVPF
Trigger: GAATGGGACTGGTGGGTACCAGCGGGCCTTTCCTCC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGATGGAGGCACAGAGATaGAGCGGGGCACCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGMEAQR*SGAPLA
Trigger: TGCTAGAGGTGCCCCGCTCCATCTCTGTGCCTCCAT...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAAAAGTCCTGCCATTATaGCCCTGCTGGCGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEKVLPL*PCWRQA
Trigger: GGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCTGTCATGCTTCTCCTaGGCCGACAGCCCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPLSCFS*ADSPVL
Trigger: CAGCACGGGGCTGTCGGCCCAGGAGAAGCATGACAG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS-3UTR TCA 90 bp TGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGATCTTGCCTCGCTGGTaGTCCCCTGAGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: CPLALSDQGLLVSLHALQILPRW*SPEYRR
Trigger: GCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGAT...CTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCAATCCCAGACACCCTaGGGCCTCTGCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSQSQTP*GLCTAS
Trigger: GCTTGCAGTGCAGAGGCCTCAGGGTGTCTGGGATTG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCCAGACCTCTGCCAATaGCTGTGGCGTCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPPDLCQ*LWRQAA
Trigger: TGCTGCCTGACGCCACAGTCATTGGCAGAGGTCTGG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCATGTGGCCCGAGTTaGCGGGCTCCCCGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESCGPS*RAPRCA
Trigger: CGCGCACCGGGGAGCCCGTCAACTCGGGCCACATGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCCGTCACAGGATGCCTaGATGCTGTGGTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGPSQDA*MLWSAG
Trigger: ACCAGCAGACCACAGCATTCAGGCATCCTGTGACGG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACCGTCACAGGATGCCTaGATGCTGTGGTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEPSQDA*MLWSAG
Trigger: ACCAGCAGACCACAGCATTCAGGCATCCTGTGACGG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCCCCGCACAGATGTGTaGCGGATGATGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSPRTDV*RMMVAS
Trigger: AGAGGCCACCATCATCCGGCACACATCTGTGCGGGG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGTTCCTCTCGTCTGACTaGCGCTTGAGGCCCCGCACA +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRFLSSD*RLRPRT
Trigger: TGTGCGGGGCCTCAAGCGGCAGTCAGACGAGAGGAA...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEAASGT*SQGPQV
Trigger: GACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTC +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPAASGT*SQGPQV
Trigger: GACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGCAATGGTGGACGACTaGTGGAGCCTTGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEAMVDD*WSLDVD
Trigger: GTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCCTCTGCACTCATCTTaGCTCGCTGGTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGPLHSS*LAGDPL
Trigger: CAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACTCCAGCTGCTCCTCTaGACTCATCTTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLELQLLL*THLASL
Trigger: CAGCGAGGCAAGATGAGTGCAGAGGAGCAGCTGGAG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGCTGCTCCTCCAGCTGCTCCTCTaGACTCATCTTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LALSDQGLLVSLHALQLLLQLLL*THLASL
Trigger: CAGCGAGGCAAGATGAGTGCAGAGGAGCAGCTGGAG...GAGCAGCTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCCAGCTGCTCCTCTaGACTCATCTTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGLQLLL*THLASL
Trigger: CAGCGAGGCAAGATGAGTGCAGAGGAGCAGCTGGAG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTTCTGGTGTCGCTTCATaGGCTCCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGSGVAS*APAAPL
Trigger: CAGAGGAGCAGCTGGAGCGCATGAAGCGACACCAGA...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATCTGGTGTCGCTTCATaGGCTCCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLESGVAS*APAAPL
Trigger: CAGAGGAGCAGCTGGAGCGCATGAAGCGACACCAGA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTCCCCGGTGCGCGGATaGAGCCAGGTCGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDSPVRG*SQVVQR
Trigger: CCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTACGGAGACCTGGCCTTaGTCCGGTCCCGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSTETWP*SGPACP
Trigger: AGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGT...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGGCAATCTTCTCCAAGTaGTGGGGCTGGTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGAIFSK*WGWSRY
Trigger: GTACCGAGACCAGCCCCAGCACTTGGAGAAGATTGC...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGACTAGCCTCGGCTTaGCCCGCCCTTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEGLASA*PALPAP
Trigger: GGGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACCAGGAGGCAGAGGTTaGAGTGAACCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEPGGRG*SEPRSC
Trigger: GCACGATCTCGGTTCACTGCAACCTCTGCCTCCTGG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCTGCCTGGCAGCGTCTaGTACCTGCTCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSLPGSV*YLLSGP
Trigger: GGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAATGGTGGACGACTGCTaGAGCCTTGACGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEMVDDC*SLDVDP
Trigger: AGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCAT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCCGTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCGTCGTGCAGCGGAGCTaGTCATTGATGAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: PVLSPWPSVLLRSRTRAFVVQRS*SLMKKT
Trigger: CGTCTTCTTCATCAATGACCAGCTCCGCTGCACGAC...GAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGCGAGTACGGAGACCTaGCCTTGCTCCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSASTET*PCSGPA
Trigger: AGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGGAGGAAAGGCCCGCTaGTACCCACCAGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEGGKAR*YPPVPF
Trigger: GAATGGGACTGGTGGGTACCAGCGGGCCTTTCCTCC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGCCCAGTGCTCCACCTaGGCCAGATTGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEAQCST*ARLLFL
Trigger: AAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCTCGACATCTTCAGGTaGCTGGCTCGGTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPLDIFR*LARSCA
Trigger: TGCGCAGGACCGAGCCAGCCACCTGAAGATGTCGAG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCCTCCTCTGGTCCGGTaGCTTCACTGTGACTCGCTC +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPPPLVR*LHCDSL
Trigger: GAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATCCACACTCCTCCTCTaGTCCGGTGGCTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLESTLLL*SGGFTV
Trigger: CACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGTGCATATTAGGGCCTaGCCTGTGGTGAACACCCGC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEVHIRA*PVVNTR
Trigger: GCGGGTGTTCACCACAGGCCAGGCCCTAATATGCAC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGGCCATGAGGGATGGTaGGGGCACACTGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSGHEGW*GHTAAL
Trigger: GAGGGCAGCAGTGTGCCCCCACCATCCCTCATGGCC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGACCCCTCCGGAGTGTaGCGTAGGGAGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSDPSGV*RREQWW
Trigger: CCACCATTGCTCCCTACGTCACACTCCGGAGGGGTC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCTCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSISLVIP*VQALQG
Trigger: GCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGA...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSSLVIP*VQALQG
Trigger: GCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGA...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCTCTCACTGGGAGGTGTaGTGTGCTTGTGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GPVSSCALGPGPSGVASCSHWEV*CACVWG
Trigger: CCCCCAAACACAAGCACATCACACCTCCCAGTGAGA...GCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR TCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCCTGGTTCATGGCCCTaGCCCAAGCGTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEPGSWP*PKRSCP
Trigger: AGGACATGAACGCTTGGGTCAGGGCCATGAACCAGG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTACCCTGAGAGCCCTCTaGCTGGCAGCGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSTLRAL*LAASGT
Trigger: GGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGT...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGGCAATGGTGGACGACTaGTGGAGCCTTGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRAMVDD*WSLDVD
Trigger: GTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGC...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGGCAATGGTGGACGACTaGTGGAGCCTTGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: CPLALSDQGLLVSLHALQAMVDD*WSLDVD
Trigger: GTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGC...CTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGCAATGGTGGACGACTaGTGGAGCCTTGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPAMVDD*WSLDVD
Trigger: GTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000532079.1
ENST00000636113.1
CDS-3UTR GCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCCTCTGCACTCATCTTaGCTCGCTGGTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPPLHSS*LAGDPL
Trigger: CAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000532079.1
ENST00000636113.1
CDS-3UTR GCA 90 bp GTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTTCATGCGCTCCAGCTaGTCCTCTGCACTCATCTTG +
Preference number: 4 (lower is better)
Translates to: VLSPWPSVLLRSRTRAFWFMRSS*SSALIL
Trigger: CAAGATGAGTGCAGAGGAGCAGCTGGAGCGCATGAA...CCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp TGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGTCTGGTGTCGCTTCATaGGCTCCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CPLALSDQGLLVSLHALQSGVAS*APAAPL
Trigger: CAGAGGAGCAGCTGGAGCGCATGAAGCGACACCAGA...CTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp GTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGCTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: VLSPWPSVLLRSRTRAFWLGGVM*LCLGDS
Trigger: AGAGTCCCCCAAACACAAGCACATCACACCTCCCAG...CCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGGAGATTCCGAACGCCTaGAAAGGCCCCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGREIPNA*KGPSPS
Trigger: CGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTC...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTATCCCAGAACTGTCCTaGTTGTGCAGCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSIPELS*LCSQPL
Trigger: GAGGGGCTGGCTGCACAAGCAGGACAGTTCTGGGAT...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCACTGTGACTCGCTCTaGTGGTGTGTGTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSHCDSL*WCVWPP
Trigger: CGGCGGCCACACACACCAGCAGAGCGAGTCACAGTG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGGCTGGTCTCGGTACTaGTCCATCTGTCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGGWSRY*SICLCN
Trigger: GTTGCACAGACAGATGGAGCAGTACCGAGACCAGCC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATTGATGATGCGCTCCTaGTCCTGCAGCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLELMMRS*SCSCKS
Trigger: GGACTTGCAGCTGCAGGAGCAGGAGCGCATCATCAA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTGCCCCGCCCTTCCTaGCCCCACAACACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSLPRPS*PHNTCH
Trigger: GTGACAGGTGTTGTGGGGGCAGGAAGGGCGGGGCAA...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCTGGAGCCTTGACGTaGACCCTGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIAGALT*TLRALC
Trigger: GCAGAGGGCTCTCAGGGTCCACGTCAAGGCTCCAGC...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGATGGTGGACGACTGCTaGAGCCTTGACGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEMVDDC*SLDVDP
Trigger: AGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCAT...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGCGTAGGGAGCAATGGTaGACGACTGCTGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: CPLALSDQGLLVSLHALQRREQW*TTAGAL
Trigger: CAAGGCTCCAGCAGTCGTCCACCATTGCTCCCTACG...CTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR CCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGCGTAGGGAGCAATGGTaGACGACTGCTGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRRREQW*TTAGAL
Trigger: CAAGGCTCCAGCAGTCGTCCACCATTGCTCCCTACG...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGATCTGCTGGCAGGTCTaGGAGGCTGATCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGICWQV*EADQFA
Trigger: AGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGAT...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGGTCGTGCAGCGGAGCTaGTCATTGATGAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGVVQRS*SLMKKT
Trigger: CGTCTTCTTCATCAATGACCAGCTCCGCTGCACGAC...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTAGCACCTGTGCAGCCTaGTTCATGGCCCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSSTCAA*FMALTQ
Trigger: TTGGGTCAGGGCCATGAACCAGGCTGCACAGGTGCT...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCTTTCAGGGTTGGTCCTaGGAGGAAAGGCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPFQGWS*EERPAG
Trigger: ACCAGCGGGCCTTTCCTCCCAGGACCAACCCTGAAA...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCTGGCGAGGAAGCGTCTaGTCCAAGGGAAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPWRGSV*SKGRLL
Trigger: CAGGAGTCTTCCCTTGGACCAGACGCTTCCTCGCCA...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCTCCACACTCCTCCTCTaGTCCGGTGGCTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPSTLLL*SGGFTV
Trigger: CACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGA...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCAACCCATGGAGGGCATaGAGCGTCGGTCCACATGAG +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPNPWRA*SVGPHE
Trigger: CTCATGTGGACCGACGCTCCATGCCCTCCATGGGTT...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGTCCAAGTGCTGGGGCTaGTCTCGGTACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWESKCWG*SRYCSI
Trigger: GATGGAGCAGTACCGAGACCAGCCCCAGCACTTGGA...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGAGGTCATTGGAAGTTaGACTAGCCTCGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEEVIGS*TSLGLP
Trigger: GGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CAA 72 bp CCGGCCGGATTCCCTGCTCAGCTGGAAGGGGTTTCCTaGGGGGCAGAAAGGTCATCTCCTTGGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PAGFPAQLEGVS*GAERSSPWRKL
Trigger: CAGCTTCCTCCAAGGAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACTCGCTTCCTCTCGTCTaGCTGCCGCTTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDSLPLV*LPLEAP
Trigger: CGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGA...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGGGCCATGTCCCCGCTaGGGGTCGCCAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWGPCPR*GSPAQA
Trigger: AGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCCCCTCCTAACATACTaGGCCAAGATCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPPLLTY*AKISRE
Trigger: CTCCCTGGAGATCTTGGCTCAGTATGTTAGGAGGGG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000532079.1
ENST00000636113.1
CDS-3UTR TCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGTCTCACTGGGAGGTGTaGTGTGCTTGTGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWESHWEV*CACVWG
Trigger: CCCCCAAACACAAGCACATCACACCTCCCAGTGAGA...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGTCAGTAGGCCTGCATaGAGAGGGCAGCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPVSRPA*RGQQKG
Trigger: ACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGAC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGGCCGCGGGGCAGGTCTaGGCGGATCATGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVAAGQV*ADHVAR
Trigger: TCGGGCCACATGATCCGCTCAGACCTGCCCCGCGGC...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATTCTCCTGGGCCATATaGGGCAGGCAGCATTCCATT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEFSWAI*GRQHSI
Trigger: AATGGAATGCTGCCTGCCTCATATGGCCCAGGAGAA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCATGAGATGAGTTCTTaGCAGCGTGGCCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSHEMSS*QRGPVP
Trigger: GGGCACGGGGCCACGCTGTCAAGAACTCATCTCATG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGTAAACTGGGAGCGCTaGCGGTGTGGGTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSVNWER*RCGSCN
Trigger: GTTACATGACCCACACCGTCAGCGCTCCCAGTTTAC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGTAAACTGGGAGCGCTaGCGGTGTGGGTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEVNWER*RCGSCN
Trigger: GTTACATGACCCACACCGTCAGCGCTCCCAGTTTAC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRSDFDP*EGPGLS
Trigger: TGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGA...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGTAGCGCTCAGGGATTaGCACCTTCTCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEVALRD*HLLWFG
Trigger: TCCAAACCAGAGAAGGTGTCAATCCCTGAGCGCTAC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATTCATGCGCTCCAGCTaGTCCTCTGCACTCATCTTG +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEFMRSS*SSALIL
Trigger: CAAGATGAGTGCAGAGGAGCAGCTGGAGCGCATGAA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGCCCAGTGTCCTCTTaGGCTCTCGGACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEGPVSS*ALGPGP
Trigger: AGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCAGGGGTGTGACCCCGTaGTCCATCACCCTCACACAG +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIRGVTP*SITLTQ
Trigger: CTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCT...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGATCCCCGGTGCGCGGATaGAGCCAGGTCGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRSPVRG*SQVVQR
Trigger: CCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGA...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCTGTCCCGTCACAGGATaGCTGAATGCTGTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPCPVTG*LNAVVC
Trigger: GCAGACCACAGCATTCAGGCATCCTGTGACGGGACA...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGAGTAGTAGGTCCTCATaGCTGACTGCTCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWESSRSS*LTARPE
Trigger: CTCAGGCCGAGCAGTCAGGCATGAGGACCTACTACT...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTTGCCCGTTGGGGCTGTaGCTGCTGGCCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTACPLGL*LLASWA
Trigger: GGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCA...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCAGAGCTGCCACACGGTaGCATCCCGGTGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPRAATR*HPGAPG
Trigger: GCCGGGCGCACCGGGATGGCACCGTGTGGCAGCTCT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGCTGTGGGGCTGCCGTaGCGGAACTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWAVGLP*RNCWRC
Trigger: GCAGCGCCAGCAGTTCCGGCACGGCAGCCCCACAGC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCATGGGCGCTGTGGGGCTaGCGTGCCGGAACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPWALWG*RAGTAG
Trigger: GCCAGCAGTTCCGGCACGGCAGCCCCACAGCGCCCA...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGCTGGTCTCGGTACTaGTCCATCTGTCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSGWSRY*SICLCN
Trigger: GTTGCACAGACAGATGGAGCAGTACCGAGACCAGCC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTAAGGCTCTTCTGTGTTaGTCCTGCAGGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGKALLC*SCRVCF
Trigger: GAAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTT...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAAAGGCTCTTCTGTGTTaGTCCTGCAGGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEKALLC*SCRVCF
Trigger: GAAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGGATCTTCTCGGCTTTaGGGTACCGCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSGSSRL*GTAPAA
Trigger: AGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGGACTAGCCTCGGCTTaGCCCGCCCTTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPGLASA*PALPAP
Trigger: GGGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATGTGGGGGCACACTGCTaGCCTCCTGCCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDVGAHC*PPATRP
Trigger: AGGTCTGGTGGCAGGAGGGCAGCAGTGTGCCCCCAC...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACCGGGGGCTGGTCCTCTaGGCTGTAGAGTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDRGLVL*AVEFGE
Trigger: CTCCCCGAACTCTACAGCCCAGAGGACCAGCCCCCG...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGATGGTGGCCTCTCTTaGCAGAGGCGGCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEDGGLS*QRRHSR
Trigger: CCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCACCGCAGCTCCACCCTaGAATCCCCATTCACACACT +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPTAAPP*NPHSHT
Trigger: AGTGTGTGAATGGGGATTCCAGGGTGGAGCTGCGGT...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTATCTGCTGGCAGGTCTaGGAGGCTGATCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGICWQV*EADQFA
Trigger: AGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGAT...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGCTCAGGCTTGTGGGGTaGCTTTTGGGACAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGLRLVG*LLGQVN
Trigger: ATTCACTTGTCCCAAAAGCCACCCCACAAGCCTGAG...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACGCGAGTACGGAGACCTaGCCTTGCTCCGGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDASTET*PCSGPA
Trigger: AGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGC...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCACATCTTCAGGTGGCTaGCTCGGTCCTGCGCATACT +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPTSSGG*LGPAHT
Trigger: AGTATGCGCAGGACCGAGCCAGCCACCTGAAGATGT...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTGGCAGATGGGCGCTGTaGGGCTGCCGTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAGRWAL*GCRAGT
Trigger: AGTTCCGGCACGGCAGCCCCACAGCGCCCATCTGCC...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTGGGAGCCAAGGCAGATaGGCGCTGTGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAGSQGR*ALWGCR
Trigger: ACGGCAGCCCCACAGCGCCCATCTGCCTTGGCTCCC...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATGGGAGGACTGGGCTGTaGGGGCGGCTTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDGRTGL*GRLALR
Trigger: TCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCC...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGGCTGGTGGGAGGACTaGGCTGTGGGGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWGWWED*AVGAAC
Trigger: GCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGGGTCCGCACAGGGCTaGTGGGAGGACTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASGSAQG*WEDWAV
Trigger: CACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTTCCTCAGCTGGGGTaGGTGAGGTCGGTACGGCAC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSFPQLG*VRSVRH
Trigger: GTGCCGTACCGACCTCACCCACCCCAGCTGAGGAAA...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGACCTGCTTGCTACGCTaGGAGGCCTCGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHETCLLR*EASEAR
Trigger: CCTGGCCTCCGAGGCCTCCCAGCGTAGCAAGCAGGT...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATACCTGCTTGCTACGCTaGGAGGCCTCGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDTCLLR*EASEAR
Trigger: CCTGGCCTCCGAGGCCTCCCAGCGTAGCAAGCAGGT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATGGAAGGGGTTTCCTTaGGGGCAGAAAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEWKGFP*GQKGHL
Trigger: GAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCAGATGTGTGCCGGATaGTGGTGGCCTCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSQMCAG*WWPLLA
Trigger: TGCCAAGAGAGGCCACCATCATCCGGCACACATCTG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGGGGCCATGTCCCCGCTaGGGGTCGCCAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVGPCPR*GSPAQA
Trigger: AGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCC...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTGCTGAGGTAGCGAGATaGGGGCAGGCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAAEVAR*GQARPL
Trigger: GAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGC...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSQGAAG*GSEMRA
Trigger: TGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCCGTGGATGTTTCACTaGCCATGCTGGACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSPWMFH*PCWTVF
Trigger: AAAGACCGTCCAGCATGGTCAGTGAAACATCCACGG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCTCCGGCCCTGGTCGGTaGACTCTGGGGAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPSGPGR*TLGSQG
Trigger: GCCTTGGCTCCCCAGAGTTCACCGACCAGGGCCGGA...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATG +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGHRMPE*CGLLVM
Trigger: CATAACCAGCAGACCACAGCATTCAGGCATCCTGTG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGTCTCCCTCCTGCTCCTaGCTCTCGAAGTTGACAATG +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRSPSCS*LSKLTM
Trigger: CATTGTCAACTTCGAGAGGCAGGAGCAGGAGGGAGA...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTGGGCCCTTGCCCAGTaGTCCACCTGGGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDWALAQ*STWARL
Trigger: CAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTAGAGCTGCCACACGGTaGCATCCCGGTGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCRAATR*HPGAPG
Trigger: GCCGGGCGCACCGGGATGGCACCGTGTGGCAGCTCT...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTTGCTCCTGCAGGGTCTaGTTCAGCTGTTCCACATCA +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSCSCRV*FSCSTS
Trigger: TGATGTGGAACAGCTGAAGCAGACCCTGCAGGAGCA...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCTTCTGTGTTGCTCCTaGAGGGTCTGCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSLLCCS*RVCFSC
Trigger: ACAGCTGAAGCAGACCCTGCAGGAGCAACACAGAAG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGAAGGCTCTTCTGTGTTaGTCCTGCAGGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRKALLC*SCRVCF
Trigger: GAAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTT...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGTGGGGGCCTGGGAGGTaGTTCATCTTCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEWGPGR*FIFLNF
Trigger: AAAGTTCAGGAAGATGAAGCACCTCCCAGGCCCCCA...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTTGCGGTACCGCGCCTaGAGCTCCTCAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDLRYRA*SSSRLG
Trigger: ACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGCCTGGGCTGCCACCTaGTTGCTACGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPAWAAT*LLRWEA
Trigger: GGCCTCCCAGCGTAGCAAGCAGGTGGCAGCCCAGGC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGGCTCCAGGCTTCTTTaGATGCTGGGTCACGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSGSRLL*MLGHGS
Trigger: TGACCCGTGACCCAGCATGCAAAGAAGCCTGGAGCC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCCGTAGGGAGCAATGGTaGACGACTGCTGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIRREQW*TTAGAL
Trigger: CAAGGCTCCAGCAGTCGTCCACCATTGCTCCCTACG...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCGGACCAGGGCCTTCTaGTGTCGCTTCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHERTRAF*CRFMRS
Trigger: GGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCCACCACGGGAACATTaGGGTTCCTCCGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSPPREH*GSSEWP
Trigger: AGGCCATTCGGAGGAACCCCAATGTTCCCGTGGTGG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGGCAGATGGGCGCTGTaGGGCTGCCGTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPGRWAL*GCRAGT
Trigger: AGTTCCGGCACGGCAGCCCCACAGCGCCCATCTGCC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGGGAGCCAAGGCAGATaGGCGCTGTGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSGSQGR*ALWGCR
Trigger: ACGGCAGCCCCACAGCGCCCATCTGCCTTGGCTCCC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCTCCTGCTCCGGCCCTaGTCGGTGAACTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASLLLRP*SVNSGE
Trigger: CTCCCCAGAGTTCACCGACCAGGGCCGGAGCAGGAG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGACCCTTGGGGGTCCTaGGGGAGGGATGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSDPWGS*GRDVRG
Trigger: CCCTCGGACATCCCTCCCCCAGGACCCCCAAGGGTC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGGGTCATGTAACCCATaGAGGGCATGGAGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSGSCNP*RAWSVG
Trigger: ACCGACGCTCCATGCCCTCCATGGGTTACATGACCC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGGGCTGGTGGGAGGACTaGGCTGTGGGGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVGWWED*AVGAAC
Trigger: GCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCC...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGAAGCTGGTTCCACTaGGCCCCTGGCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEGSWFH*APGSRL
Trigger: AAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCTTCC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATCTCCTTGGAGGAAGCTaGTTCCACTGGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDLLGGS*FHWAPG
Trigger: GCCAGGGGCCCAGTGGAACCAGCTTCCTCCAAGGAG...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCCTGGGGGCAGGTTGTaGGCCCCAGTCCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEPGGRL*APVLLN
Trigger: GTTCAAGAGGACTGGGGCCCACAACCTGCCCCCAGG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTCGCTTCCTCTCGTCTaGCTGCCGCTTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVSLPLV*LPLEAP
Trigger: CGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCGGGCCATGTCCCCGCTaGGGGTCGCCAGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIGPCPR*GSPAQA
Trigger: AGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCC...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGACCCCTCCGGAGTGTaGCGTAGGGAGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASDPSGV*RREQWW
Trigger: CCACCATTGCTCCCTACGTCACACTCCGGAGGGGTC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGCTGAGGTAGCGAGATaGGGGCAGGCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPAEVAR*GQARPL
Trigger: GAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCAGGTCTGGGAGGCTaGTCAGTTTGCTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIAGLGG*SVCLCF
Trigger: GAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGC...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGTCAGTAGGCCTGCATaGAGAGGGCAGCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIVSRPA*RGQQKG
Trigger: ACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGAC...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCAAACGTGCAATCTCTaGAGTCCCTGTCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSQTCNL*SPCLLS
Trigger: GGACAGTAGACAGGGACTTCAGAGATTGCACGTTTG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGTGCAGAGAGGCCCTCTaGATACACAGTATATTTTGC +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGCREAL*IHSIFC
Trigger: GCAAAATATACTGTGTATTCAGAGGGCCTCTCTGCA...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATCATCATGGCCACGATaGGGACAATCTCTCGTATGT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLESSWPR*GQSLVC
Trigger: ACATACGAGAGATTGTCCTCATCGTGGCCATGATGA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATCCGGTGGCTTCACTGTaGCTCGCTCTGCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDPVASL*LALLVC
Trigger: ACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGG...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGAGCGTCGGTCCACATaGGATGAGTTCTTGACAGCG +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSERRST*DEFLTA
Trigger: CGCTGTCAAGAACTCATCTCATGTGGACCGACGCTC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCTTGGGCTCCACGTGTaGTCCTCGTGGAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSLGLHV*SSWSFT
Trigger: TGTGAAACTCCACGAGGATCACACGTGGAGCCCAAG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTACCCTGAGAGCCCTCTaGCTGGCAGCGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTATLRAL*LAASGT
Trigger: GGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGT...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGGGCCCAGTGTCCTCTTaGGCTCTCGGACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVGPVSS*ALGPGP
Trigger: AGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTGTCCCGTCACAGGATaGCTGAATGCTGTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSCPVTG*LNAVVC
Trigger: GCAGACCACAGCATTCAGGCATCCTGTGACGGGACA...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGAACTGTCCTGCTTGTaGAGCCAGCCCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEELSCL*SQPLTT
Trigger: GGTGGTGAGGGGCTGGCTGCACAAGCAGGACAGTTC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATAGCTGGGCAAGGGGATaGTCCCGAGGACCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDSWARG*SRGPLL
Trigger: AAGAAGCGGTCCTCGGGAGCATCCCCTTGCCCAGCT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTAGTAGTAGGTCCTCATaGCTGACTGCTCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSSSRSS*LTARPE
Trigger: CTCAGGCCGAGCAGTCAGGCATGAGGACCTACTACT...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTTGCTCCGGTCCCGCTTaGCCTCCAGTGGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSCSGPA*PPVGPS
Trigger: AGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCA...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGGGGCACCTCTAGCATaGTCCTGCTCCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSGAPLA*SCSGPG
Trigger: ACCAGGGCCGGAGCAGGAGCATGCTAGAGGTGCCCC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGACAGCGTGGCCCCGTaGCCTCCTTGGAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPDSVAP*PPWRIP
Trigger: GGGGATTCTCCAAGGAGGGCACGGGGCCACGCTGTC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATAGTCACTGCCTGGGCTaGCACCTGCTTGCTACGCTG +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDSHCLG*HLLATL
Trigger: CAGCGTAGCAAGCAGGTGGCAGCCCAGGCAGTGACT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTCCGGCCGGATTCCCTaGTCAGCTGGAAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDSGRIP*SAGRGF
Trigger: GAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCGGA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGCAGCTGCAAAGTCCTaGATCCTCAACCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSAAAKS*ILNLPA
Trigger: GGCAGGAAGGTTGAGGATGCAGGACTTTGCAGCTGC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAATCTGTACGTGCAGCTaGAAAGTCCTGCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEICTCS*KVLHPQ
Trigger: TTGAGGATGCAGGACTTTGCAGCTGCACGTACAGAT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCTGCCATTATGGCCCTaGTGGCGGCAGGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASLPLWP*WRQAMR
Trigger: CCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCTGCCACCTGCTTaGTACGCTGGGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPVLPPA*YAGRPR
Trigger: CCGAGGCCTCCCAGCGTAGCAAGCAGGTGGCAGCAC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR GCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGGGAGGAGGGCCAGCTaGTGTGCTGCCACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWGRRAS*CAATCL
Trigger: CAAGCAGGTGGCAGCACAGCAGCTGGCCCTCCTCCC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTARGVGA*EVLHLP
Trigger: AGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCG...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGACGGGGGCTGGTCCTCTaGGCTGTAGAGTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRRGLVL*AVEFGE
Trigger: CTCCCCGAACTCTACAGCCCAGAGGACCAGCCCCCG...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAAGTCCTAGGGAGGGCTaGGCCATGTCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRSPREG*AMSPLR
Trigger: CCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCTGCCTGGCAGCGTCTaGTACCTGCTCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSLPGSV*YLLSGP
Trigger: GGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACGGCATTCGTCCAGCCTaGGTCGTGGACAAACAGCCC +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDGIRPA*VVDKQP
Trigger: GGGCTGTTTGTCCACGACCCAGGCTGGACGAATGCC...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCTCAGGCTTGTGGGGTaGCTTTTGGGACAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSLRLVG*LLGQVN
Trigger: ATTCACTTGTCCCAAAAGCCACCCCACAAGCCTGAG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCTGAGCGGATCATGTaGCCCGAGTTGACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESERIM*PELTGS
Trigger: GGAGCCCGTCAACTCGGGCCACATGATCCGCTCAGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCCAGTGGGTCCCTCTaGGAACGGTACTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESSGSL*ERYCSP
Trigger: GGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGGCATCCTCCTCGGCTaGCGAGTACGGAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPGILLG*RVRRPG
Trigger: GCCAGGTCTCCGTACTCGCCAGCCGAGGAGGATGCC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGAGGAAAGGCCCGCTaGTACCCACCAGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEGGKAR*YPPVPF
Trigger: GAATGGGACTGGTGGGTACCAGCGGGCCTTTCCTCC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGATACTTGTAGTCACTTaGCAGGTTTCGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEILVVT*QVSGRW
Trigger: CCACCTCCCCGAAACCTGCCAAGTGACTACAAGTAT...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGGGCAGATGGGCGCTGTaGGGCTGCCGTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVGRWAL*GCRAGT
Trigger: AGTTCCGGCACGGCAGCCCCACAGCGCCCATCTGCC...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGGGAGCCAAGGCAGATaGGCGCTGTGGGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCGSQGR*ALWGCR
Trigger: ACGGCAGCCCCACAGCGCCCATCTGCCTTGGCTCCC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACCTGGTCGGTGAACTCTaGGGAGCCAAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDLVGEL*GAKADG
Trigger: CCCATCTGCCTTGGCTCCCCAGAGTTCACCGACCAG...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGTGTGGCCGCCGGGGTaGGAAGACCCTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFVWPPG*EDPWGS
Trigger: GGACCCCCAAGGGTCTTCCCACCCCGGCGGCCACAC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTTTGTCTTCCAAGTCCTaGAGGACCCTGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGLSSKS*RTLSCS
Trigger: TGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAA...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCATCTTCTCCAAGTGCTaGGGCTGGTCTCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIIFSKC*GWSRYC
Trigger: GCAGTACCGAGACCAGCCCCAGCACTTGGAGAAGAT...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTATCTTCTCCAAGTGCTaGGGCTGGTCTCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSIFSKC*GWSRYC
Trigger: GCAGTACCGAGACCAGCCCCAGCACTTGGAGAAGAT...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGGGAGGACTGGGCTGTaGGGGCGGCTTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPGRTGL*GRLALR
Trigger: TCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCAGCCACACTGTTCTaGTCCTGGCCTGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESATLF*SWPEVG
Trigger: GCCGACCTCAGGCCAGGACCAGAACAGTGTGGCTGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGGCCATGAGGGATGGTaGGGGCACACTGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSGHEGW*GHTAAL
Trigger: GAGGGCAGCAGTGTGCCCCCACCATCCCTCATGGCC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGCAGGCCATGAGGGATaGTGGGGGCACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWAGHEG*WGHTAA
Trigger: GGCAGCAGTGTGCCCCCACCATCCCTCATGGCCTGC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGAAAGTCCTGCCATTATaGCCCTGCTGGCGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEKVLPL*PCWRQA
Trigger: GGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTT...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACTCCTCATGTGGGGCTaGAAGTCAAATCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLELLMWG*KSNQSP
Trigger: AGGACTTTGATTTGACTTCCAGCCCCACATGAGGAG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CAA 72 bp AGACCTCTGCCAATGACTGTGGCGTCAGGCAGCAGGTaGGCTCAGGCTTGTGGGGTGGCTTTTGGGACAAGT +
Preference number: 4 (lower is better)
Translates to: RPLPMTVASGSR*AQACGVAFGTS
Trigger: ACTTGTCCCAAAAGCCACCCCACAAGCCTGAGCCAACCTGCTGCCTGACGCCACAGTCATTGGCAGAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACCAGATGTGTGCCGGATaGTGGTGGCCTCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDQMCAG*WWPLLA
Trigger: TGCCAAGAGAGGCCACCATCATCCGGCACACATCTG...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGTCGCTTCCTCTCGTCTaGCTGCCGCTTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVSLPLV*LPLEAP
Trigger: CGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGA...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCCAGCTCAGGCTCACTaGCATACGACCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASPAQAH*HTTAAP
Trigger: TGGAGCTGCGGTCGTATGTCAGTGAGCCTGAGCTGG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTATCTTGCCTCGCTGGTaGTCCCCTGAGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAILPRW*SPEYRR
Trigger: GCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGAT...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGCTGAGGTAGCGAGATaGGGGCAGGCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCAEVAR*GQARPL
Trigger: GAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIQGAAG*GSEMRA
Trigger: TGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFQGAAG*GSEMRA
Trigger: TGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGTGTTTGGGGGACTCTaGGGGGCACTCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCVFGGL*GALGSL
Trigger: CAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACAC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAACGCGGCTGGGAGGACTaGCTGGGTATTTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSERGWED*LGISSG
Trigger: GCCTGAGGAAATACCCAGTCAGTCCTCCCAGCCGCG...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCCTGGTTCATGGCCCTaGCCCAAGCGTTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEPGSWP*PKRSCP
Trigger: AGGACATGAACGCTTGGGTCAGGGCCATGAACCAGG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGTCATCATGGCCACGATaGGGACAATCTCTCGTATGT +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRSSWPR*GQSLVC
Trigger: ACATACGAGAGATTGTCCTCATCGTGGCCATGATGA...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCCTGCCTCTCGAAGTTaGCAATGTCATCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSPASRS*QCHHGH
Trigger: GTGGCCATGATGACATTGTCAACTTCGAGAGGCAGG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTCCGGTGGCTTCACTGTaGCTCGCTCTGCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAPVASL*LALLVC
Trigger: ACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGG...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTCCCCATTCACACACTaGCCCAGCTCCCGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVSPFTH*PSSRSR
Trigger: GCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGGGA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGCAATGGTGGACGACTaGTGGAGCCTTGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEAMVDD*WSLDVD
Trigger: GTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGGCCCAGTGTCCTCTTaGGCTCTCGGACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCGPVSS*ALGPGP
Trigger: AGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCCTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSILGGVM*LCLGDS
Trigger: AGAGTCCCCCAAACACAAGCACATCACACCTCCCAG...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTCCCTCACACAGCATCTaGTGGCAGGTCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAPSHSI*WQVWEA
Trigger: AGCCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGG...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGCCTGGGGGACAGCCTaGCGCTCCACCTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSAWGTA*RSTFSI
Trigger: TATGGAGAAGGTGGAGCGGCAGGCTGTCCCCCAGGC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGACGGAGACCTGGCCTTaGTCCGGTCCCGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVTETWP*SGPACP
Trigger: AGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGT...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCACGGTGCCATCCCGGTaGGCCCGGCGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFTVPSR*ARRSSL
Trigger: GAGTGAAGAGCGCCGGGCGCACCGGGATGGCACCGT...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATGCTGTGGGGCTGCCGTaGCGGAACTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHAVGLP*RNCWRC
Trigger: GCAGCGCCAGCAGTTCCGGCACGGCAGCCCCACAGC...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCTTCTGTGTTGCTCCTaGAGGGTCTGCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSLLCCS*RVCFSC
Trigger: ACAGCTGAAGCAGACCCTGCAGGAGCAACACAGAAG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTTTGCGGTACCGCGCCTaGAGCTCCTCAAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSLRYRA*SSSRLG
Trigger: ACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAA...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCCTGCTCCTGCAGCTaGAAGTCCAGGTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESCSCS*KSRSAT
Trigger: TGTGGCTGACCTGGACTTGCAGCTGCAGGAGCAGGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCATTGCCCCGCCCTTCCTaGCCCCACAACACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPLPRPS*PHNTCH
Trigger: GTGACAGGTGTTGTGGGGGCAGGAAGGGCGGGGCAA...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCCAGGAGGCAGAGGTTaGAGTGAACCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEPGGRG*SEPRSC
Trigger: GCACGATCTCGGTTCACTGCAACCTCTGCCTCCTGG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACTGCCATTATGGCCCTaGTGGCGGCAGGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPLPLWP*WRQAMR
Trigger: CCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGCTGTGCTGCCACCTaGTTGCTACGCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVCCAAT*LLRWEA
Trigger: GGCCTCCCAGCGTAGCAAGCAGGTGGCAGCACAGCA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGGATGGTGGCCTCTCTTaGCAGAGGCGGCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVDGGLS*QRRHSR
Trigger: CCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATC...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGAGTCCTAGGGAGGGCTaGGCCATGTCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVSPREG*AMSPLR
Trigger: CCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACT...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGCTGCCTGGCAGCGTCTaGTACCTGCTCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVLPGSV*YLLSGP
Trigger: GGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAG...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGCTGGAGCCTTGACGTaGACCCTGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSAGALT*TLRALC
Trigger: GCAGAGGGCTCTCAGGGTCCACGTCAAGGCTCCAGC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGGCTGGAGCCTTGACGTaGACCCTGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVAGALT*TLRALC
Trigger: GCAGAGGGCTCTCAGGGTCCACGTCAAGGCTCCAGC...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACCGTAGGGAGCAATGGTaGACGACTGCTGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDRREQW*TTAGAL
Trigger: CAAGGCTCCAGCAGTCGTCCACCATTGCTCCCTACG...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGACGGACCAGGGCCTTCTaGTGTCGCTTCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRRTRAF*CRFMRS
Trigger: GGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCG...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACGGACCAGGGCCTTCTaGTGTCGCTTCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPRTRAF*CRFMRS
Trigger: GGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGACACTCAACAGGCTATaGAGACAAGAACCGCTATTA +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGTLNRL*RQEPLL
Trigger: TAATAGCGGTTCTTGTCTCCATAGCCTGTTGAGTGT...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAACGTCAGGCAGCAGGTTaGCTCAGGCTTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSERQAAG*LRLVGW
Trigger: CCACCCCACAAGCCTGAGCCAACCTGCTGCCTGACG...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTTCTTGGGTCCAGGCTTaGCCTCCAGGGTGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCSWVQA*PPGWRR
Trigger: CCGCCTCCACCCTGGAGGCCAAGCCTGGACCCAAGA...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACCCACCACGGGAACATTaGGGTTCCTCCGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDPPREH*GSSEWP
Trigger: AGGCCATTCGGAGGAACCCCAATGTTCCCGTGGTGG...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATAGCACCTGTGCAGCCTaGTTCATGGCCCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDSTCAA*FMALTQ
Trigger: TTGGGTCAGGGCCATGAACCAGGCTGCACAGGTGCT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCTGCTATCCCCTTTCTaGGCCCTTGCCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASLLSPF*ALAQCS
Trigger: GGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTCTCGACATCTTCAGGTaGCTGGCTCGGTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTALDIFR*LARSCA
Trigger: TGCGCAGGACCGAGCCAGCCACCTGAAGATGTCGAG...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGCTCCTGCTCCGGCCCTaGTCGGTGAACTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVLLLRP*SVNSGE
Trigger: CTCCCCAGAGTTCACCGACCAGGGCCGGAGCAGGAG...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCTCCTGCTCCGGCCCTaGTCGGTGAACTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCLLLRP*SVNSGE
Trigger: CTCCCCAGAGTTCACCGACCAGGGCCGGAGCAGGAG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCCTCCTCTGGTCCGGTaGCTTCACTGTGACTCGCTC +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASPPLVR*LHCDSL
Trigger: GAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTARGVGA*EVLHLQ
Trigger: TTGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCG...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGGGTCAGTCACTGCCTaGGCTGCCACCTGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASGSVTA*AATCLL
Trigger: TAGCAAGCAGGTGGCAGCCCAGGCAGTGACTGACCC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCCTGGGGGCAGGTTGTaGGCCCCAGTCCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVPGGRL*APVLLN
Trigger: GTTCAAGAGGACTGGGGCCCACAACCTGCCCCCAGG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCAGATGTGTGCCGGATaGTGGTGGCCTCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASQMCAG*WWPLLA
Trigger: TGCCAAGAGAGGCCACCATCATCCGGCACACATCTG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCTCGCTTCCTCTCGTCTaGCTGCCGCTTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFSLPLV*LPLEAP
Trigger: CGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGA...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCCAGCTCAGGCTCACTaGCATACGACCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPPAQAH*HTTAAP
Trigger: TGGAGCTGCGGTCGTATGTCAGTGAGCCTGAGCTGG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGGACCCCTCCGGAGTGTaGCGTAGGGAGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVDPSGV*RREQWW
Trigger: CCACCATTGCTCCCTACGTCACACTCCGGAGGGGTC...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGCTGAGGTAGCGAGATaGGGGCAGGCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFAEVAR*GQARPL
Trigger: GAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHQGAAG*GSEMRA
Trigger: TGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAGTTCAGGTCACCCTCTaGCCAGGCATTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRVQVTL*PGIRPA
Trigger: GGCTGGACGAATGCCTGGTCAGAGGGTGACCTGAAC...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCGCGGCTGGGAGGACTaGCTGGGTATTTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCRGWED*LGISSG
Trigger: GCCTGAGGAAATACCCAGTCAGTCCTCCCAGCCGCG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACGTCAGTAGGCCTGCATaGAGAGGGCAGCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDVSRPA*RGQQKG
Trigger: ACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGAC...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGCCGCGGGGCAGGTCTaGGCGGATCATGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPAAGQV*ADHVAR
Trigger: TCGGGCCACATGATCCGCTCAGACCTGCCCCGCGGC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGGGCCTGGCCTGTGGTaGACACCCGCAGTCGGTAAG +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFGPGLW*TPAVGK
Trigger: CTTACCGACTGCGGGTGTTCACCACAGGCCAGGCCC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAATTGCTACGATACAATaGAAGTTGCTTCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEIATIQ*KLLPLT
Trigger: GGTGAGAGGAAGCAACTTTCATTGTATCGTAGCAAT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCATCCTGCCACCAGACCTaGGTCCCAGGGAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPSCHQT*VPGKPI
Trigger: GATTGGCTTCCCTGGGACTCAGGTCTGGTGGCAGGA...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCCCCGCACAGATGTGTaGCGGATGATGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVPRTDV*RMMVAS
Trigger: AGAGGCCACCATCATCCGGCACACATCTGTGCGGGG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSAASGT*SQGPQV
Trigger: GACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCAATATTTGCGGCTTATaGGATCCTCAGGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSINICGL*DPQGPQ
Trigger: CTGTGGCCCCTGAGGATCGCATAAGCCGCAAATATT...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTTCGAGACAGCACCTGTaGAGCCTGGTTCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTASRQHL*SLVHGP
Trigger: AGGGCCATGAACCAGGCTGCACAGGTGCTGTCTCGA...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCTCTGGGAACGGTACTaGTCTCCCTCCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPLWERY*SPSCSC
Trigger: GCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGAG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCCGAGGGGTGTCGGGTaGTCTTGGGAAGAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPPRGVG*SWEESG
Trigger: ACCAGACTCTTCCCAAGAGCACCCGACACCCCTCGG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACTGCCGTGCCGGAACTaGTGGCGCTGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELLPCRN*WRCCHS
Trigger: CGAGTGGCAGCAGCGCCAGCAGTTCCGGCACGGCAG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGCACTGTGACTCGCTCTaGTGGTGTGTGTGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVHCDSL*WCVWPP
Trigger: CGGCGGCCACACACACCAGCAGAGCGAGTCACAGTG...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTGCTGTGGGGGCGGCTTaGTCTCAGAAGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAAVGAA*SQKLRV
Trigger: CACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGC...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGGATCTTCTCGGCTTTaGGGTACCGCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWGSSRL*GTAPAA
Trigger: AGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCAGGTCGGCTGTAGGTTaGACATGCTTGACCGGGCGA +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASRSAVG*TCLTGR
Trigger: TCGCCCGGTCAAGCATGTGCAACCTACAGCCGACCT...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTCCGGCCGGATTCCCTaGTCAGCTGGAAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVSGRIP*SAGRGF
Trigger: GAAACCCCTTCCAGCTGAGCAGGGAATCCGGCCGGA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCTGACAAGAGCCTTTTaGTGGAGGAAGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASLTRAF*WRKPGG
Trigger: GCCCCCAGGCTTCCTCCAGCAAAAGGCTCTTGTCAG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCAAGGGCCACAAACACTaGACCTGGCTTGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASKGHKH*TWLGSP
Trigger: GGGGCTACCAAGCCAGGTGCAGTGTTTGTGGCCCTT...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCGATGGTGGCCTCTCTTaGCAGAGGCGGCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIDGGLS*QRRHSR
Trigger: CCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATC...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAGGCATTCGTCCAGCCTaGGTCGTGGACAAACAGCCC +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEGIRPA*VVDKQP
Trigger: GGGCTGTTTGTCCACGACCCAGGCTGGACGAATGCC...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGAGGTTTAGGGAAACATaGGATTTCAAACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGRFRET*DFKQQG
Trigger: TCCCTGTTGTTTGAAATCCCATGTTTCCCTAAACCT...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGGAACAACCTCAGTCTTaGGAGAATGTATTCAAACGT +
Preference number: 4 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGEQPQS*ENVFKR
Trigger: ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTC...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTGAGAGATCACGTAGCTaGGCAAGGGGATGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAERSRS*ARGCSR
Trigger: TCGGGAGCATCCCCTTGCCCAGCTACGTGATCTCTC...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTTCTTCTCTGCCCGTTaGGGCTGTGCCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWFFSAR*GCACWP
Trigger: AGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGGTGTCGGGTGCTCTTaGGAAGAGTCTGGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSGVGCS*EESGSF
Trigger: AAAACTACCAGACTCTTCCCAAGAGCACCCGACACC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCTGGTCGGTGAACTCTaGGGAGCCAAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPLVGEL*GAKADG
Trigger: CCCATCTGCCTTGGCTCCCCAGAGTTCACCGACCAG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTATGGAGGCACAGAGATaGAGCGGGGCACCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAMEAQR*SGAPLA
Trigger: TGCTAGAGGTGCCCCGCTCCATCTCTGTGCCTCCAT...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGATGTCCGAGGGAGATaGAGGCACAGAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASDVRGR*RHRDGA
Trigger: CGCTCCATCTCTGTGCCTCCATCTCCCTCGGACATC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGTGTGGCCGCCGGGGTaGGAAGACCCTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPVWPPG*EDPWGS
Trigger: GGACCCCCAAGGGTCTTCCCACCCCGGCGGCCACAC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGAGTTCTTGACAGCGTaGCCCCGTGCCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPEFLTA*PRALLG
Trigger: TCCAAGGAGGGCACGGGGCCACGCTGTCAAGAACTC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCTCCAAGTGCTGGGGCTaGTCTCGGTACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASSKCWG*SRYCSI
Trigger: GATGGAGCAGTACCGAGACCAGCCCCAGCACTTGGA...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCGGGAGGACTGGGCTGTaGGGGCGGCTTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIGRTGL*GRLALR
Trigger: TCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCC...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTTTTCCTCAGCTGGGGTaGGTGAGGTCGGTACGGCAC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSFPQLG*VRSVRH
Trigger: GTGCCGTACCGACCTCACCCACCCCAGCTGAGGAAA...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVRGVGA*EVLHLQ
Trigger: TTGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCACACTGTTCTGGTCCTaGCCTGAGGTCGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASTLFWS*PEVGCR
Trigger: CCTACAGCCGACCTCAGGCCAGGACCAGAACAGTGT...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTTCAGCCACACTGTTCTaGTCCTGGCCTGAGGTCGGC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSSATLF*SWPEVG
Trigger: GCCGACCTCAGGCCAGGACCAGAACAGTGTGGCTGA...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATGGCTTCTTTGCATGCTaGGTCACGGGTCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDGFFAC*VTGQSL
Trigger: CAGTGACTGACCCGTGACCCAGCATGCAAAGAAGCC...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAAGATGTCACCCAGTGTaGAGTTTATTGCTACGATAC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLERCHPV*SLLLRY
Trigger: GTATCGTAGCAATAAACTCCACACTGGGTGACATCT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGCAGGCCATGAGGGATaGTGGGGGCACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFAGHEG*WGHTAA
Trigger: GGCAGCAGTGTGCCCCCACCATCCCTCATGGCCTGC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCCATTATGGCCCTGCTaGCGGCAGGCCATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWPLWPC*RQAMRD
Trigger: ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCCATTATGGCCCTGCTaGCGGCAGGCCATGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVPLWPC*RQAMRD
Trigger: ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCGTCTGACTGCCGCTTaGGGCCCCGCACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFRLTAA*GPAQMC
Trigger: ACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGCCAGCTCAGGCTCACTaGCATACGACCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVPAQAH*HTTAAP
Trigger: TGGAGCTGCGGTCGTATGTCAGTGAGCCTGAGCTGG...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGATCTTGCCTCGCTGGTaGTCCCCTGAGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVILPRW*SPEYRR
Trigger: GCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGAT...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCAATCCCAGACACCCTaGGGCCTCTGCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCQSQTP*GLCTAS
Trigger: GCTTGCAGTGCAGAGGCCTCAGGGTGTCTGGGATTG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGCTGGTTATGGTCGATaGAGTAGCTGGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWAGYGR*SSWRPP
Trigger: AGGAGGGCGCCAGCTACTTCATCGACCATAACCAGC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCACCTGACTGCTCGGCCTaGGAGCCCGCTGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPPDCSA*EPAVEL
Trigger: CAGCTCCACAGCGGGCTCTCAGGCCGAGCAGTCAGG...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAACCTGGGTGTCGGCACTaGAGTAGTAGGTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEPGCRH*SSRSSC
Trigger: GCATGAGGACCTACTACTTCAGTGCCGACACCCAGG...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAACCCGGCCACATTCGTaGCAGGACTCTGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRTRPHS*QDSVWL
Trigger: CAACCACACAGAGTCCTGTCACGAATGTGGCCGGGT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGACCCGGCCACATTCGTaGCAGGACTCTGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVTRPHS*QDSVWL
Trigger: CAACCACACAGAGTCCTGTCACGAATGTGGCCGGGT...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACTTCTCCTGGGCCATATaGGGCAGGCAGCATTCCATT +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDFSWAI*GRQHSI
Trigger: AATGGAATGCTGCCTGCCTCATATGGCCCAGGAGAA...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCACTCAGGCCTGCAGTaGCATCTTCAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSHSGLQ*HLQFSI
Trigger: TATGGAGAATTGAAGATGTCACTGCAGGCCTGAGTG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCCTCTGCACTCATCTTaGCTCGCTGGTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVPLHSS*LAGDPL
Trigger: CAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGACTCCAGCTGCTCCTCTaGACTCATCTTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRLQLLL*THLASL
Trigger: CAGCGAGGCAAGATGAGTGCAGAGGAGCAGCTGGAG...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACTCCAGCTGCTCCTCTaGACTCATCTTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPLQLLL*THLASL
Trigger: CAGCGAGGCAAGATGAGTGCAGAGGAGCAGCTGGAG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACTTCATGCGCTCCAGCTaGTCCTCTGCACTCATCTTG +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDFMRSS*SSALIL
Trigger: CAAGATGAGTGCAGAGGAGCAGCTGGAGCGCATGAA...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTCTGGTGTCGCTTCATaGGCTCCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVSGVAS*APAAPL
Trigger: CAGAGGAGCAGCTGGAGCGCATGAAGCGACACCAGA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATGGCCCAGTGTCCTCTTaGGCTCTCGGACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHGPVSS*ALGPGP
Trigger: AGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAGAGATTCCGAACGCCTaGAAAGGCCCCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEEIPNA*KGPSPS
Trigger: CGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTC...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTCTCCCTCCTGCTCCTaGCTCTCGAAGTTGACAATG +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHESPSCS*LSKLTM
Trigger: CATTGTCAACTTCGAGAGGCAGGAGCAGGAGGGAGA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGATTTGCACTCAGGCCTaGAGTGACATCTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRICTQA*SDIFNS
Trigger: AGAATTGAAGATGTCACTGCAGGCCTGAGTGCAAAT...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGCTGTGGGGGCGGCTTaGTCTCAGAAGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPAVGAA*SQKLRV
Trigger: CACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGCTGTGGGGGCGGCTTaGTCTCAGAAGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPAVGAA*SQKLRV
Trigger: CACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGACCCGTTCCAGCAACTaGAGGTCAAAGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHETRSSN*RSKSCS
Trigger: TGAGCAGGACTTTGACCTGCAGTTGCTGGAACGGGT...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTGCAGGTCAAAGTCCTaGTCACGCTTCCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHECRSKS*SRFHEP
Trigger: TGGCTCATGGAAGCGTGAGCAGGACTTTGACCTGCA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTGCAGGTCAAAGTCCTaGTCACGCTTCCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDCRSKS*SRFHEP
Trigger: TGGCTCATGGAAGCGTGAGCAGGACTTTGACCTGCA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGTGACAGGCATGGCCTaGACTTTCAACCAGCCATTC +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEVTGMA*TFNQPF
Trigger: GAATGGCTGGTTGAAAGTGCAGGCCATGCCTGTCAC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGACCGGGCGAGGATGTTaGGGATCTTCTCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVTGRGC*GSSRLC
Trigger: GCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGT...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTACCGGGCGAGGATGTTaGGGATCTTCTCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSTGRGC*GSSRLC
Trigger: GCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGT...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCAGGTCGGCTGTAGGTTaGACATGCTTGACCGGGCGA +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPRSAVG*TCLTGR
Trigger: TCGCCCGGTCAAGCATGTGCAACCTACAGCCGACCT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCATCCTCAACCTTCCTaGCACTCAGCCCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPHPQPS*HSALEG
Trigger: CCCCTCAAGGGCTGAGTGGCAGGAAGGTTGAGGATG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGAAGGGCCACAAACACTaGACCTGGCTTGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVKGHKH*TWLGSP
Trigger: GGGGCTACCAAGCCAGGTGCAGTGTTTGTGGCCCTT...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGATGGTGGCCTCTCTTaGCAGAGGCGGCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELDGGLS*QRRHSR
Trigger: CCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCTGCCTGGCAGCGTCTaGTACCTGCTCTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHLPGSV*YLLSGP
Trigger: GGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCGTAGGGAGCAATGGTaGACGACTGCTGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVRREQW*TTAGAL
Trigger: CAAGGCTCCAGCAGTCGTCCACCATTGCTCCCTACG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCGTAGGGAGCAATGGTaGACGACTGCTGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSRREQW*TTAGAL
Trigger: CAAGGCTCCAGCAGTCGTCCACCATTGCTCCCTACG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGAACAACCTCAGTCTTaGGAGAATGTATTCAAACGT +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGEQPQS*ENVFKR
Trigger: ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGAATTCACTATTTTCTaGAGAAAACTGTCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGEFTIF*RKLSRH
Trigger: GTGACGGGACAGTTTTCTCCAGAAAATAGTGAATTC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGAGAGATCACGTAGCTaGGCAAGGGGATGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWERSRS*ARGCSR
Trigger: TCGGGAGCATCCCCTTGCCCAGCTACGTGATCTCTC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCCGCTTGCCCTCCAGTaGGTCCCTCTGGGAACGGTA +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFPLALQ*VPLGTV
Trigger: TACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTTTCAGGGTTGGTCCTaGGAGGAAAGGCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWFQGWS*EERPAG
Trigger: ACCAGCGGGCCTTTCCTCCCAGGACCAACCCTGAAA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCTGCTATCCCCTTTCTaGGCCCTTGCCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCLLSPF*ALAQCS
Trigger: GGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCATGGAGGCACAGAGATaGAGCGGGGCACCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPMEAQR*SGAPLA
Trigger: TGCTAGAGGTGCCCCGCTCCATCTCTGTGCCTCCAT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCGACCCTTGGGGGTCCTaGGGGAGGGATGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LTRSQMLQIETSPHLNPADPWGS*GRDVRG
Trigger: CCCTCGGACATCCCTCCCCCAGGACCCCCAAGGGTC...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCTCTGCTGGTGTGTGTaGCCGCCGGGGTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHLCWCV*PPGWED
Trigger: GTCTTCCCACCCCGGCGGCCACACACACCAGCAGAG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTATGTGACTCGCTCTGCTaGTGTGTGTGGCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELCDSLC*CVWPPG
Trigger: CCCCGGCGGCCACACACACCAGCAGAGCGAGTCACA...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCAACCCATGGAGGGCATaGAGCGTCGGTCCACATGAG +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPNPWRA*SVGPHE
Trigger: CTCATGTGGACCGACGCTCCATGCCCTCCATGGGTT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAAACCCATGGAGGGCATaGAGCGTCGGTCCACATGAG +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSENPWRA*SVGPHE
Trigger: CTCATGTGGACCGACGCTCCATGCCCTCCATGGGTT...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCGGGTCCGCACAGGGCTaGTGGGAGGACTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSGSAQG*WEDWAV
Trigger: CACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCC...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGGCTTCTTTGCATGCTaGGTCACGGGTCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASGFFAC*VTGQSL
Trigger: CAGTGACTGACCCGTGACCCAGCATGCAAAGAAGCC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGGAAGCTGGTTCCACTaGGCCCCTGGCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFGSWFH*APGSRL
Trigger: AAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCTTCC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGATTCCCTGCTCAGCTaGAAGGGGTTTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPDSLLS*KGFPWG
Trigger: CCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGATTCCCTGCTCAGCTaGAAGGGGTTTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPDSLLS*KGFPWG
Trigger: CCCCCAAGGAAACCCCTTCCAGCTGAGCAGGGAATC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATTTTCATTTAAAGTGTaGCTCCACCCAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEFSFKV*LHPMEV
Trigger: AACCTCCATTGGGTGGAGCCACACTTTAAATGAAAA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCGTCTGACTGCCGCTTaGGGCCCCGCACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHRLTAA*GPAQMC
Trigger: ACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCCAGCTCAGGCTCACTaGCATACGACCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIPAQAH*HTTAAP
Trigger: TGGAGCTGCGGTCGTATGTCAGTGAGCCTGAGCTGG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAACCCCTCCTAACATACTaGGCCAAGATCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEPLLTY*AKISRE
Trigger: CTCCCTGGAGATCTTGGCTCAGTATGTTAGGAGGGG...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGAAGGAGCTTGTGCAATaGATTAGGGAAAGAACAATC +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRKELVQ*IRERTI
Trigger: GATTGTTCTTTCCCTAATTCATTGCACAAGCTCCTT...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCAAGGAGCTTGTGCAATaGATTAGGGAAAGAACAATC +
Preference number: 4 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPKELVQ*IRERTI
Trigger: GATTGTTCTTTCCCTAATTCATTGCACAAGCTCCTT...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTAGGGCAGCAGAAAGGTaGGTCACATCTGGGAACACT +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTARAAER*VTSGNT
Trigger: AGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCT...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACCAAACGTGCAATCTCTaGAGTCCCTGTCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDQTCNL*SPCLLS
Trigger: GGACAGTAGACAGGGACTTCAGAGATTGCACGTTTG...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTGGCGCCCTCCTCCGTaGAGCCCTCCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLWRPPP*SPPPSR
Trigger: GCGGCTGGGAGGAGGGCTTCACGGAGGAGGGCGCCA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGCTCTTCTTGAAGAATaGATTCACTATTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGALLEE*IHYFLE
Trigger: CTCCAGAAAATAGTGAATTCATTCTTCAAGAAGAGC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCATGAGATGAGTTCTTaGCAGCGTGGCCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIHEMSS*QRGPVP
Trigger: GGGCACGGGGCCACGCTGTCAAGAACTCATCTCATG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGTAAACTGGGAGCGCTaGCGGTGTGGGTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSVNWER*RCGSCN
Trigger: GTTACATGACCCACACCGTCAGCGCTCCCAGTTTAC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWSDFDP*EGPGLS
Trigger: TGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGATCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRSDFDP*EGPGLS
Trigger: TGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGA...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTACTCCACTAGAATTCTaGAGTTCTCTTTATTTGCAC +
Preference number: 4 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGTPLEF*SSLYLH
Trigger: GTGCAAATAAAGAGAACTTCAGAATTCTAGTGGAGT...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAACTCCACTAGAATTCTaGAGTTCTCTTTATTTGCAC +
Preference number: 4 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLETPLEF*SSLYLH
Trigger: GTGCAAATAAAGAGAACTTCAGAATTCTAGTGGAGT...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGCCTCTGCACTCATCTTaGCTCGCTGGTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVPLHSS*LAGDPL
Trigger: CAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGG...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGGCCCAGTGTCCTCTTaGGCTCTCGGACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPGPVSS*ALGPGP
Trigger: AGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCCCTCACACAGCATCTaGTGGCAGGTCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIPSHSI*WQVWEA
Trigger: AGCCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATTGGGCCCTTGCCCAGTaGTCCACCTGGGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHWALAQ*STWARL
Trigger: CAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCA...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGCCAAGGGAAGACTCCTaGTATCCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVPREDS*YPLSGP
Trigger: GGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGG...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCGACAGCGTGGCCCCGTaGCCTCCTTGGAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: LTRSQMLQIETSPHLNPADSVAP*PPWRIP
Trigger: GGGGATTCTCCAAGGAGGGCACGGGGCCACGCTGTC...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTGCTCCATCTGTCTGTaGAACACCTCCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDCSICL*NTSSTD
Trigger: ATCTGTGCTGGAGGTGTTGCACAGACAGATGGAGCA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGGCTGGTCTCGGTACTaGTCCATCTGTCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPGWSRY*SICLCN
Trigger: GTTGCACAGACAGATGGAGCAGTACCGAGACCAGCC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCCAGGCTTCTTTGCATaGTGGGTCACGGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVPGFFA*WVTGQS
Trigger: TGACTGACCCGTGACCCAGCATGCAAAGAAGCCTGG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACCAGGCTTCTTTGCATaGTGGGTCACGGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPPGFFA*WVTGQS
Trigger: TGACTGACCCGTGACCCAGCATGCAAAGAAGCCTGG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGGCAGCTGCAAAGTCCTaGATCCTCAACCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVAAAKS*ILNLPA
Trigger: GGCAGGAAGGTTGAGGATGCAGGACTTTGCAGCTGC...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCGCCAACCAGCCTCTTaGTGGAGTCTACTGGGAACA +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWRQPAS*WSLLGT
Trigger: TGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCACCGCAGCTCCACCCTaGAATCCCCATTCACACACT +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPTAAPP*NPHSHT
Trigger: AGTGTGTGAATGGGGATTCCAGGGTGGAGCTGCGGT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAGCTGGGAGGACTGACTaGGTATTTCCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEAGRTD*VFPQAP
Trigger: AGGAGCCTGAGGAAATACCCAGTCAGTCCTCCCAGC...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCGTCAGGCAGCAGGTTaGCTCAGGCTTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHRQAAG*LRLVGW
Trigger: CCACCCCACAAGCCTGAGCCAACCTGCTGCCTGACG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGAACAACCTCAGTCTTaGGAGAATGTATTCAAACGT +
Preference number: 4 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSEQPQS*ENVFKR
Trigger: ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCTCTGAGCGGATCATGTaGCCCGAGTTGACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHISERIM*PELTGS
Trigger: GGAGCCCGTCAACTCGGGCCACATGATCCGCTCAGA...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCTCGACATCTTCAGGTaGCTGGCTCGGTCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFLDIFR*LARSCA
Trigger: TGCGCAGGACCGAGCCAGCCACCTGAAGATGTCGAG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGGATGTCCGAGGGAGATaGAGGCACAGAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVDVRGR*RHRDGA
Trigger: CGCTCCATCTCTGTGCCTCCATCTCCCTCGGACATC...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAGTGTGGCCGCCGGGGTaGGAAGACCCTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQVWPPG*EDPWGS
Trigger: GGACCCCCAAGGGTCTTCCCACCCCGGCGGCCACAC...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCTGTGACTCGCTCTGCTaGTGTGTGTGGCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSCDSLC*CVWPPG
Trigger: CCCCGGCGGCCACACACACCAGCAGAGCGAGTCACA...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCGAGTTCTTGACAGCGTaGCCCCGTGCCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIEFLTA*PRALLG
Trigger: TCCAAGGAGGGCACGGGGCCACGCTGTCAAGAACTC...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGTCCAAGTGCTGGGGCTaGTCTCGGTACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVSKCWG*SRYCSI
Trigger: GATGGAGCAGTACCGAGACCAGCCCCAGCACTTGGA...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAATCTTCTCCAAGTGCTaGGGCTGGTCTCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRIFSKC*GWSRYC
Trigger: GCAGTACCGAGACCAGCCCCAGCACTTGGAGAAGAT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGAGCTCAGCTCGGATATaGACAAGGTCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWSSARI*TRSSCS
Trigger: GCTGCAGGAGGACCTTGTCCATATCCGAGCTGAGCT...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGGGAGGACTGGGCTGTaGGGGCGGCTTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPGRTGL*GRLALR
Trigger: TCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCTGGAAGGGGTTTCCTTaGGGGCAGAAAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASWKGFP*GQKGHL
Trigger: GAGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCA...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGAGGTCATTGGAAGTTaGACTAGCCTCGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPEVIGS*TSLGLP
Trigger: GGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATAGTTTCACACAGAGCTaGTCATCAGGTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDSFTQS*SSGQGQ
Trigger: CTGTCCCTGACCTGATGACCAGCTCTGTGTGAAACT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCAATCCCAGACACCCTaGGGCCTCTGCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHQSQTP*GLCTAS
Trigger: GCTTGCAGTGCAGAGGCCTCAGGGTGTCTGGGATTG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCCATGTTTATTGGCGTTaGTGCAGAGACTTACACAAG +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIHVYWR*CRDLHK
Trigger: CTTGTGTAAGTCTCTGCATCAACGCCAATAAACATG...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCCTGGGTGTCGGCACTaGAGTAGTAGGTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFPGCRH*SSRSSC
Trigger: GCATGAGGACCTACTACTTCAGTGCCGACACCCAGG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGACATATCCCTCTTCAGTaGCGATCGAGACAGCACCTG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRHIPLQ*RSRQHL
Trigger: CAGGTGCTGTCTCGATCGTCACTGAAGAGGGATATG...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACCGGTGGCTTCACTGTaGCTCGCTCTGCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELPVASL*LALLVC
Trigger: ACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGAGCGTCGGTCCACATaGGATGAGTTCTTGACAGCG +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCERRST*DEFLTA
Trigger: CGCTGTCAAGAACTCATCTCATGTGGACCGACGCTC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGTAGCGCTCAGGGATTaGCACCTTCTCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSVALRD*HLLWFG
Trigger: TCCAAACCAGAGAAGGTGTCAATCCCTGAGCGCTAC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTTCACCCAGAAGTACCTaGATCTGTACGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSSPRST*ICTCSC
Trigger: GCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGA...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCCAACCTCACCAACATaGAGAAACCCCCGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWPTSPT*RNPRLY
Trigger: GTAGAGACGGGGGTTTCTTCATGTTGGTGAGGTTGG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCATCCCCATTCACACACTaGCCCAGCTCCCGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPSPFTH*PSSRSR
Trigger: GCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGGGA...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCCTCTGCACTCATCTTaGCTCGCTGGTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFPLHSS*LAGDPL
Trigger: CAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGATTCATGCGCTCCAGCTaGTCCTCTGCACTCATCTTG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRFMRSS*SSALIL
Trigger: CAAGATGAGTGCAGAGGAGCAGCTGGAGCGCATGAA...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAACTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSELGGVM*LCLGDS
Trigger: AGAGTCCCCCAAACACAAGCACATCACACCTCCCAG...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGAAGCAAAGGAGCTTGTaGAATGAATTAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRKQRSL*NELGKE
Trigger: TTCTTTCCCTAATTCATTGCACAAGCTCCTTTGCTT...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCATCCCAGAACTGTCCTaGTTGTGCAGCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFIPELS*LCSQPL
Trigger: GAGGGGCTGGCTGCACAAGCAGGACAGTTCTGGGAT...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCAATATTTGCGGCTTATaGGATCCTCAGGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASNICGL*DPQGPQ
Trigger: CTGTGGCCCCTGAGGATCGCATAAGCCGCAAATATT...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACTCTGGGAACGGTACTaGTCTCCCTCCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELLWERY*SPSCSC
Trigger: GCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGAG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGCATTCCATTCTTCTCTaGCCGTTGGGGCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVHSILL*PLGLCL
Trigger: CAGGCACAGCCCCAACGGGCAGAGAAGAATGGAATG...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCATGGGCCCTTGCCCAGTaGTCCACCTGGGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPWALAQ*STWARL
Trigger: CAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCA...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGCTGTGGGGCTGCCGTaGCGGAACTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISAVGLP*RNCWRC
Trigger: GCAGCGCCAGCAGTTCCGGCACGGCAGCCCCACAGC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTTGCTCCTGCAGGGTCTaGTTCAGCTGTTCCACATCA +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSCSCRV*FSCSTS
Trigger: TGATGTGGAACAGCTGAAGCAGACCCTGCAGGAGCA...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCAAGGCTCTTCTGTGTTaGTCCTGCAGGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPKALLC*SCRVCF
Trigger: GAAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTATTTGCACTCAGGCCTaGAGTGACATCTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSICTQA*SDIFNS
Trigger: AGAATTGAAGATGTCACTGCAGGCCTGAGTGCAAAT...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCTGGGGGCCTGGGAGGTaGTTCATCTTCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPWGPGR*FIFLNF
Trigger: AAAGTTCAGGAAGATGAAGCACCTCCCAGGCCCCCA...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGGCTCCAGGCTTCTTTaGATGCTGGGTCACGGGTCA +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFGSRLL*MLGHGS
Trigger: TGACCCGTGACCCAGCATGCAAAGAAGCCTGGAGCC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCTGACAAGAGCCTTTTaGTGGAGGAAGCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFLTRAF*WRKPGG
Trigger: GCCCCCAGGCTTCCTCCAGCAAAAGGCTCTTGTCAG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGTCAAATCAAAGTCCTaGCATTATGGCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASVKSKS*HYGPAG
Trigger: GCCAGCAGGGCCATAATGGCAGGACTTTGATTTGAC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCTCACGGGTCAGTCACTaGCTGGGTTGGAAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPSRVSH*LGWKVL
Trigger: TAACACCTTCCAACCCAGGCAGTGACTGACCCGTGA...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTACCGCAGCTCCACCCTaGAATCCCCATTCACACACT +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCTAAPP*NPHSHT
Trigger: AGTGTGTGAATGGGGATTCCAGGGTGGAGCTGCGGT...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGGCTGGGAGGACTGACTaGGTATTTCCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVAGRTD*VFPQAP
Trigger: AGGAGCCTGAGGAAATACCCAGTCAGTCCTCCCAGC...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGCTGGGAGGACTGACTaGGTATTTCCTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCAGRTD*VFPQAP
Trigger: AGGAGCCTGAGGAAATACCCAGTCAGTCCTCCCAGC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTCGTGCAGCGGAGCTaGTCATTGATGAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPVVQRS*SLMKKT
Trigger: CGTCTTCTTCATCAATGACCAGCTCCGCTGCACGAC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCAGGACTCTGTGTGGTTaGCCTGGGGGACAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSRTLCG*PGGQPA
Trigger: GGCAGGCTGTCCCCCAGGCCAACCACACAGAGTCCT...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGATGTGTTTTTCAGGGTTaGTCCTGGGAGGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRCVFQG*SWEERP
Trigger: GGGCCTTTCCTCCCAGGACCAACCCTGAAAAACACA...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCATGTGTTTTTCAGGGTTaGTCCTGGGAGGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPCVFQG*SWEERP
Trigger: GGGCCTTTCCTCCCAGGACCAACCCTGAAAAACACA...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGACATCTTCAGGTGGCTaGCTCGGTCCTGCGCATACT +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVTSSGG*LGPAHT
Trigger: AGTATGCGCAGGACCGAGCCAGCCACCTGAAGATGT...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACCTCCTCTGGTCCGGTaGCTTCACTGTGACTCGCTC +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELPPLVR*LHCDSL
Trigger: GAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGAGTTCTTGACAGCGTaGCCCCGTGCCCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELEFLTA*PRALLG
Trigger: TCCAAGGAGGGCACGGGGCCACGCTGTCAAGAACTC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGCTCAGCTCGGATATaGACAAGGTCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVSSARI*TRSSCS
Trigger: GCTGCAGGAGGACCTTGTCCATATCCGAGCTGAGCT...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCATTTTCCATCTCAGTaGACTCTCTGGAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEHFPSQ*TLWRAQ
Trigger: CTGAGCTCTCCAGAGAGTCCACTGAGATGGAAAATG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGGCTGGTGGGAGGACTaGGCTGTGGGGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRGWWED*AVGAAC
Trigger: GCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCC...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGTTCCACTGGGCCCCTaGCTCCAGGCTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFVPLGP*LQASLH
Trigger: ATGCAAAGAAGCCTGGAGCCAGGGGCCCAGTGGAAC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCAACCAGCCTCTTGCTaGAGTCTACTGGGAACACCT +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSQPASC*SLLGTP
Trigger: AGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCTCCTCATGTGGGGCTaGAAGTCAAATCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHELLMWG*KSNQSP
Trigger: AGGACTTTGATTTGACTTCCAGCCCCACATGAGGAG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCCAGCTCAGGCTCACTaGCATACGACCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSPAQAH*HTTAAP
Trigger: TGGAGCTGCGGTCGTATGTCAGTGAGCCTGAGCTGG...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCCCCTCCTAACATACTaGGCCAAGATCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIPLLTY*AKISRE
Trigger: CTCCCTGGAGATCTTGGCTCAGTATGTTAGGAGGGG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGTGTTTGGGGGACTCTaGGGGGCACTCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSVFGGL*GALGSL
Trigger: CAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACAC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCTCTCACTGGGAGGTGTaGTGTGCTTGTGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHISHWEV*CACVWG
Trigger: CCCCCAAACACAAGCACATCACACCTCCCAGTGAGA...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTTCCGGCCCTGGTCGGTaGACTCTGGGGAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRSGPGR*TLGSQG
Trigger: GCCTTGGCTCCCCAGAGTTCACCGACCAGGGCCGGA...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTATCTGGTGTCGCTTCATaGGCTCCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELSGVAS*APAAPL
Trigger: CAGAGGAGCAGCTGGAGCGCATGAAGCGACACCAGA...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATG +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWHRMPE*CGLLVM
Trigger: CATAACCAGCAGACCACAGCATTCAGGCATCCTGTG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGCTCGCATCCCCGTGTaGACAGCCTTAAAGGAATAT +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPARIPV*TALKEY
Trigger: ATATTCCTTTAAGGCTGTGCACACGGGGATGCGAGC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTTGCCCGTTGGGGCTGTaGCTGCTGGCCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRCPLGL*LLASWA
Trigger: GGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCA...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTGCCCGTTGGGGCTGTaGCTGCTGGCCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLCPLGL*LLASWA
Trigger: GGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCACCGAGGGGTGTCGGGTaGTCTTGGGAAGAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPPRGVG*SWEESG
Trigger: ACCAGACTCTTCCCAAGAGCACCCGACACCCCTCGG...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTACGGTGCCATCCCGGTaGGCCCGGCGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRTVPSR*ARRSSL
Trigger: GAGTGAAGAGCGCCGGGCGCACCGGGATGGCACCGT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGATGCTCCATCTGTCTGTaGAACACCTCCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRCSICL*NTSSTD
Trigger: ATCTGTGCTGGAGGTGTTGCACAGACAGATGGAGCA...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGTGCTCCTGCAGGGTCTaGTTCAGCTGTTCCACATCA +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVCSCRV*FSCSTS
Trigger: TGATGTGGAACAGCTGAAGCAGACCCTGCAGGAGCA...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCGCCAACCAGCCTCTTaGTGGAGTCTACTGGGAACA +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFRQPAS*WSLLGT
Trigger: TGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTCAAATCAAAGTCCTaGCATTATGGCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPVKSKS*HYGPAG
Trigger: GCCAGCAGGGCCATAATGGCAGGACTTTGATTTGAC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTAACCATGTAGGTCAATaGACAGCTCTCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTANHVGQ*TALSLG
Trigger: TCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTT...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCTGGGGTTCCTCCGAATaGCCTGGTCTCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFWGSSE*PGLSSQ
Trigger: TTGGGAAGAGAGACCAGGCCATTCGGAGGAACCCCA...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGCCCAGTGCTCCACCTaGGCCAGATTGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELAQCST*ARLLFL
Trigger: AAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCCTGCTATCCCCTTTCTaGGCCCTTGCCCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTRSQMLQIETSPHLNPALLSPF*ALAQCS
Trigger: GGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAG...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAATACTTGTAGTCACTTaGCAGGTTTCGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRILVVT*QVSGRW
Trigger: CCACCTCCCCGAAACCTGCCAAGTGACTACAAGTAT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGATACTTGTAGTCACTTaGCAGGTTTCGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVILVVT*QVSGRW
Trigger: CCACCTCCCCGAAACCTGCCAAGTGACTACAAGTAT...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCACATCTTCAGGTGGCTaGCTCGGTCCTGCGCATACT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFTSSGG*LGPAHT
Trigger: AGTATGCGCAGGACCGAGCCAGCCACCTGAAGATGT...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGACCCTTGGGGGTCCTaGGGGAGGGATGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISDPWGS*GRDVRG
Trigger: CCCTCGGACATCCCTCCCCCAGGACCCCCAAGGGTC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATTCCACACTCCTCCTCTaGTCCGGTGGCTTCACTGTG +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHSTLLL*SGGFTV
Trigger: CACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGA...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGGGTCATGTAACCCATaGAGGGCATGGAGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELGSCNP*RAWSVG
Trigger: ACCGACGCTCCATGCCCTCCATGGGTTACATGACCC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCAGCACAGATTCTAGCTaGTCTTTGTTCTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: PGPEFSRDSERLQRPLSISTDSS*SLFSLR
Trigger: CCTTAAAGAGAACAAAGACCAGCTAGAATCTGTGCT...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTCTCAGTGGACTCTCTaGAGAGCTCAGCTCGGATAT +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVSQWTL*RAQLGY
Trigger: ATATCCGAGCTGAGCTCTCCAGAGAGTCCACTGAGA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGGGTCCGCACAGGGCTaGTGGGAGGACTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISGSAQG*WEDWAV
Trigger: CACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTTCCCATCATGGCCTaGTTAGAGGGAAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPVPIMA*LEGRDF
Trigger: GAAATCCCTTCCCTCTAACCAGGCCATGATGGGAAC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CAA 72 bp GCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTaGGTGTCTGAGCTAGCAGCTGCAGAGAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AFKDMNVLGLTP*VSELAAAERPS
Trigger: AGAGGGCCTCTCTGCAGCTGCTAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAACGTCTGACTGCCGCTTaGGGCCCCGCACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQRLTAA*GPAQMC
Trigger: ACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACG...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTTCGCTTCCTCTCGTCTaGCTGCCGCTTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISSLPLV*LPLEAP
Trigger: CGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGA...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATGCAGGTCTGGGAGGCTaGTCAGTTTGCTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHAGLGG*SVCLCF
Trigger: GAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGC...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTGGATTAGAGAGGCAATaGGCGGTAACACTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAGLERQ*AVTLKA
Trigger: TGCTTTTAGTGTTACCGCTCATTGCCTCTCTAATCC...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGCAAACGTGCAATCTCTaGAGTCCCTGTCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVQTCNL*SPCLLS
Trigger: GGACAGTAGACAGGGACTTCAGAGATTGCACGTTTG...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCCGTGGATGTTTCACTaGCCATGCTGGACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFPWMFH*PCWTVF
Trigger: AAAGACCGTCCAGCATGGTCAGTGAAACATCCACGG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCATATCCCTCTTCAGTaGCGATCGAGACAGCACCTG +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFHIPLQ*RSRQHL
Trigger: CAGGTGCTGTCTCGATCGTCACTGAAGAGGGATATG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGAGCGTCGGTCCACATaGGATGAGTTCTTGACAGCG +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELERRST*DEFLTA
Trigger: CGCTGTCAAGAACTCATCTCATGTGGACCGACGCTC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR TCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGACACTCAGGCCTGCAGTaGCATCTTCAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRHSGLQ*HLQFSI
Trigger: TATGGAGAATTGAAGATGTCACTGCAGGCCTGAGTG...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGACAGCTCTCTGCTaGTGTCCAAGTCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVWTALC*CPSHSL
Trigger: AAGACTATGACTTGGACATCAGCAGAGAGCTGTCCA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCCGACAGCCCCGTGCTaGCTTCTTCAGCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHPTAPC*LLQHFV
Trigger: TACAAAGTGCTGAAGAAGTCAGCACGGGGCTGTCGG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGCAATGGTGGACGACTaGTGGAGCCTTGACGTGGAC +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPAMVDD*WSLDVD
Trigger: GTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCTGGGAGGTGTGATGTaGTTGTGTTTGGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHILGGVM*LCLGDS
Trigger: AGAGTCCCCCAAACACAAGCACATCACACCTCCCAG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCTGAATGCTGTGGTCTaGTGGTTATGGTCGATGAAG +
Preference number: 4 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSLNAVV*WLWSMK
Trigger: CTTCATCGACCATAACCAGCAGACCACAGCATTCAG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGCTCGCATCCCCGTGTaGACAGCCTTAAAGGAATAT +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCARIPV*TALKEY
Trigger: ATATTCCTTTAAGGCTGTGCACACGGGGATGCGAGC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGGGGCACCTCTAGCATaGTCCTGCTCCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISGAPLA*SCSGPG
Trigger: ACCAGGGCCGGAGCAGGAGCATGCTAGAGGTGCCCC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGACAGCGTGGCCCCGTaGCCTCCTTGGAGAATCCCC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRDSVAP*PPWRIP
Trigger: GGGGATTCTCCAAGGAGGGCACGGGGCCACGCTGTC...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGTGCTCCATCTGTCTGTaGAACACCTCCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVCSICL*NTSSTD
Trigger: ATCTGTGCTGGAGGTGTTGCACAGACAGATGGAGCA...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATATTTGCACTCAGGCCTaGAGTGACATCTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDICTQA*SDIFNS
Trigger: AGAATTGAAGATGTCACTGCAGGCCTGAGTGCAAAT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACATTTGCACTCAGGCCTaGAGTGACATCTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDICTQA*SDIFNS
Trigger: AGAATTGAAGATGTCACTGCAGGCCTGAGTGCAAAT...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGGATGGTGGCCTCTCTTaGCAGAGGCGGCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLDGGLS*QRRHSR
Trigger: CCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATC...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGAGTCCTAGGGAGGGCTaGGCCATGTCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLSPREG*AMSPLR
Trigger: CCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTAGTCCTAGGGAGGGCTaGGCCATGTCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISSPREG*AMSPLR
Trigger: CCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACT...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGCTGGAGCCTTGACGTaGACCCTGAGAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSAGALT*TLRALC
Trigger: GCAGAGGGCTCTCAGGGTCCACGTCAAGGCTCCAGC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAATGGTGGACGACTGCTaGAGCCTTGACGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPMVDDC*SLDVDP
Trigger: AGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCAT...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACACACTCAACAGGCTATaGAGACAAGAACCGCTATTA +
Preference number: 4 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDTLNRL*RQEPLL
Trigger: TAATAGCGGTTCTTGTCTCCATAGCCTGTTGAGTGT...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTTGCTTCGACATATGTaGATTCGGCTCTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHELLRHM*IRLFLK
Trigger: CTTCAAGAAGAGCCGAATCCACATATGTCGAAGCAA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGATGCTGGACGGTCTTTaGTTTCTGTCTTGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVMLDGL*FLSCFD
Trigger: GTCGAAGCAAGACAGAAACCAAAGACCGTCCAGCAT...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCTCTTCCCAAAGCTGTaGACTTTACTGCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASLFPKL*TLLLDF
Trigger: AAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGAG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAACCGCTTGCCCTCCAGTaGGTCCCTCTGGGAACGGTA +
Preference number: 4 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQPLALQ*VPLGTV
Trigger: TACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGG...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAGGCATCCTCCTCGGCTaGCGAGTACGGAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLGILLG*RVRRPG
Trigger: GCCAGGTCTCCGTACTCGCCAGCCGAGGAGGATGCC...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCATGGCGAGGAAGCGTCTaGTCCAAGGGAAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPWRGSV*SKGRLL
Trigger: CAGGAGTCTTCCCTTGGACCAGACGCTTCCTCGCCA...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTGGTGTCGGGTGCTCTTaGGAAGAGTCTGGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCGVGCS*EESGSF
Trigger: AAAACTACCAGACTCTTCCCAAGAGCACCCGACACC...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGATGTCCGAGGGAGATaGAGGCACAGAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPDVRGR*RHRDGA
Trigger: CGCTCCATCTCTGTGCCTCCATCTCCCTCGGACATC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTCTCTGCTGGTGTGTGTaGCCGCCGGGGTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRLCWCV*PPGWED
Trigger: GTCTTCCCACCCCGGCGGCCACACACACCAGCAGAG...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGCTCTGCTGGTGTGTGTaGCCGCCGGGGTGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLLCWCV*PPGWED
Trigger: GTCTTCCCACCCCGGCGGCCACACACACCAGCAGAG...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCAACCCATGGAGGGCATaGAGCGTCGGTCCACATGAG +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSNPWRA*SVGPHE
Trigger: CTCATGTGGACCGACGCTCCATGCCCTCCATGGGTT...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTTGTCTTCCAAGTCCTaGAGGACCCTGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVLSSKS*RTLSCS
Trigger: TGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATAGCTCAGCTCGGATATaGACAAGGTCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHSSARI*TRSSCS
Trigger: GCTGCAGGAGGACCTTGTCCATATCCGAGCTGAGCT...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGTCTCAGTGGACTCTCTaGAGAGCTCAGCTCGGATAT +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVSQWTL*RAQLGY
Trigger: ATATCCGAGCTGAGCTCTCCAGAGAGTCCACTGAGA...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGGCTGGTGGGAGGACTaGGCTGTGGGGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSGWWED*AVGAAC
Trigger: GCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCAACCAGCCTCTTGCTaGAGTCTACTGGGAACACCT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFQPASC*SLLGTP
Trigger: AGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGTGGCTCCACCCAATaGAGGTTTTCGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVCGSTQ*RFSLLL
Trigger: CAACAACAACGAAAACCTCCATTGGGTGGAGCCACA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTGTGGCTCCACCCAATaGAGGTTTTCGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWCGSTQ*RFSLLL
Trigger: CAACAACAACGAAAACCTCCATTGGGTGGAGCCACA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGACCCCTCCGGAGTGTaGCGTAGGGAGCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISDPSGV*RREQWW
Trigger: CCACCATTGCTCCCTACGTCACACTCCGGAGGGGTC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTATCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLSLVIP*VQALQG
Trigger: GCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGA...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAAATCTTGCCTCGCTGGTaGTCCCCTGAGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQILPRW*SPEYRR
Trigger: GCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGAT...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATAGGGCAGCAGAAAGGTaGGTCACATCTGGGAACACT +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHRAAER*VTSGNT
Trigger: AGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCT...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCATACCCCTTTGGTGTCTaGGCTAGCAGCTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPYPFGV*ASSCRE
Trigger: CTCTCTGCAGCTGCTAGCTCAGACACCAAAGGGGTA...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACCTGCCTCTCGAAGTTaGCAATGTCATCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELPASRS*QCHHGH
Trigger: GTGGCCATGATGACATTGTCAACTTCGAGAGGCAGG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGTAAACTGGGAGCGCTaGCGGTGTGGGTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPVNWER*RCGSCN
Trigger: GTTACATGACCCACACCGTCAGCGCTCCCAGTTTAC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGCACTCAGGCCTGCAGTaGCATCTTCAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVHSGLQ*HLQFSI
Trigger: TATGGAGAATTGAAGATGTCACTGCAGGCCTGAGTG...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAAATCTCACTTTCTCCTaGGGTCATTGGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPNLTFS*GHWKLD
Trigger: GTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATT...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTC +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSAASGT*SQGPQV
Trigger: GACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGACCCTGAGAGCCCTCTaGCTGGCAGCGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLTLRAL*LAASGT
Trigger: GGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTACCCTGAGAGCCCTCTaGCTGGCAGCGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISTLRAL*LAASGT
Trigger: GGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGT...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTATTCATGCGCTCCAGCTaGTCCTCTGCACTCATCTTG +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELFMRSS*SSALIL
Trigger: CAAGATGAGTGCAGAGGAGCAGCTGGAGCGCATGAA...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGCTGAATGCTGTGGTCTaGTGGTTATGGTCGATGAAG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVLNAVV*WLWSMK
Trigger: CTTCATCGACCATAACCAGCAGACCACAGCATTCAG...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCAGCTGGGCAAGGGGATaGTCCCGAGGACCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSSWARG*SRGPLL
Trigger: AAGAAGCGGTCCTCGGGAGCATCCCCTTGCCCAGCT...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCATTCCATTCTTCTCTaGCCGTTGGGGCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSHSILL*PLGLCL
Trigger: CAGGCACAGCCCCAACGGGCAGAGAAGAATGGAATG...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCGCAATCTTCTCCAAGTaGTGGGGCTGGTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: LTRSQMLQIETSPHLNPAAIFSK*WGWSRY
Trigger: GTACCGAGACCAGCCCCAGCACTTGGAGAAGATTGC...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGGGCTGCCACCTGCTTaGTACGCTGGGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSGLPPA*YAGRPR
Trigger: CCGAGGCCTCCCAGCGTAGCAAGCAGGTGGCAGCCC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCAGTGTGGAGTTTATTaGTACGATACAATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSQCGVY*YDTMKV
Trigger: AACTTTCATTGTATCGTAGCAATAAACTCCACACTG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLRGVGA*EVLHLP
Trigger: AGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCG...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTCGGACCAGGGCCTTCTaGTGTCGCTTCATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRRTRAF*CRFMRS
Trigger: GGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCG...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAATCTGCTGGCAGGTCTaGGAGGCTGATCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELICWQV*EADQFA
Trigger: AGCAAACTGATCAGCCTCCCAGACCTGCCAGCAGAT...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAAAGGTGAGTCACATCTaGGAACACTCAACAGGCTAT +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEKVSHI*EHSTGY
Trigger: ATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTT...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCTCAGGCTTGTGGGGTaGCTTTTGGGACAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHILRLVG*LLGQVN
Trigger: ATTCACTTGTCCCAAAAGCCACCCCACAAGCCTGAG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCTGGGGTTCCTCCGAATaGCCTGGTCTCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSWGSSE*PGLSSQ
Trigger: TTGGGAAGAGAGACCAGGCCATTCGGAGGAACCCCA...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGAGGACTCTGTGTGGTTaGCCTGGGGGACAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLRTLCG*PGGQPA
Trigger: GGCAGGCTGTCCCCCAGGCCAACCACACAGAGTCCT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCCAGTGGGTCCCTCTaGGAACGGTACTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSSSGSL*ERYCSP
Trigger: GGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGA...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGTTGTCTTCCAAGTCCTaGAGGACCCTGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVLSSKS*RTLSCS
Trigger: TGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAA...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTTTGTCTTCCAAGTCCTaGAGGACCCTGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCLSSKS*RTLSCS
Trigger: TGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAA...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCATCTTCTCCAAGTGCTaGGGCTGGTCTCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LTRSQMLQIETSPHLNPAIFSKC*GWSRYC
Trigger: GCAGTACCGAGACCAGCCCCAGCACTTGGAGAAGAT...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCATTTTCCATCTCAGTaGACTCTCTGGAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCHFPSQ*TLWRAQ
Trigger: CTGAGCTCTCCAGAGAGTCCACTGAGATGGAAAATG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGGGTCCGCACAGGGCTaGTGGGAGGACTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSGSAQG*WEDWAV
Trigger: CACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTTTTCATTTAAAGTGTaGCTCCACCCAATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEFSFKV*LHPMEV
Trigger: AACCTCCATTGGGTGGAGCCACACTTTAAATGAAAA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAACAGATGTGTGCCGGATaGTGGTGGCCTCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQQMCAG*WWPLLA
Trigger: TGCCAAGAGAGGCCACCATCATCCGGCACACATCTG...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAACAGATGTGTGCCGGATaGTGGTGGCCTCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQQMCAG*WWPLLA
Trigger: TGCCAAGAGAGGCCACCATCATCCGGCACACATCTG...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTTGCAGAGAGGCCCTCTaGATACACAGTATATTTTGC +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCCREAL*IHSIFC
Trigger: GCAAAATATACTGTGTATTCAGAGGGCCTCTCTGCA...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCAGCTTTTAAAGATATaGATGTCCTGGGCCTTACCC +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCQLLKI*MSWALP
Trigger: GGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGCTGGTTATGGTCGATaGAGTAGCTGGCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSAGYGR*SSWRPP
Trigger: AGGAGGGCGCCAGCTACTTCATCGACCATAACCAGC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCTTCTCCTGGGCCATATaGGGCAGGCAGCATTCCATT +
Preference number: 4 (lower is better)
Translates to: LTRSQMLQIETSPHLNPAFSWAI*GRQHSI
Trigger: AATGGAATGCTGCCTGCCTCATATGGCCCAGGAGAA...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCTGGACAGCTCTCTGCTaGTGTCCAAGTCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFWTALC*CPSHSL
Trigger: AAGACTATGACTTGGACATCAGCAGAGAGCTGTCCA...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGGGCCTGGCCTGTGGTaGACACCCGCAGTCGGTAAG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSGPGLW*TPAVGK
Trigger: CTTACCGACTGCGGGTGTTCACCACAGGCCAGGCCC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCATTGCTACGATACAATaGAAGTTGCTTCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPIATIQ*KLLPLT
Trigger: GGTGAGAGGAAGCAACTTTCATTGTATCGTAGCAAT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTCCTGCCACCAGACCTaGGTCCCAGGGAAGCCAATC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLSCHQT*VPGKPI
Trigger: GATTGGCTTCCCTGGGACTCAGGTCTGGTGGCAGGA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTTTTGGCAAATGTCATaGAGTCGATACTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVFWQMS*SRYWQH
Trigger: ATGCTGCCAGTATCGACTTCATGACATTTGCCAAAA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTCCCCGCACAGATGTGTaGCGGATGATGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISPRTDV*RMMVAS
Trigger: AGAGGCCACCATCATCCGGCACACATCTGTGCGGGG...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCCCTCTGCACTCATCTTaGCTCGCTGGTGATCCCCTG +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSPLHSS*LAGDPL
Trigger: CAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGG...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCCTCCAGCTGCTCCTCTaGACTCATCTTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSLQLLL*THLASL
Trigger: CAGCGAGGCAAGATGAGTGCAGAGGAGCAGCTGGAG...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAGAGATTCCGAACGCCTaGAAAGGCCCCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQEIPNA*KGPSPS
Trigger: CGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTC...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTACCCTCACACAGCATCTaGTGGCAGGTCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLPSHSI*WQVWEA
Trigger: AGCCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGG...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTAGGGGTGTGACCCCGTaGTCCATCACCCTCACACAG +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRRGVTP*SITLTQ
Trigger: CTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAGAACTGTCCTGCTTGTaGAGCCAGCCCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLELSCL*SQPLTT
Trigger: GGTGGTGAGGGGCTGGCTGCACAAGCAGGACAGTTC...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTCCGAGGGGTGTCGGGTaGTCTTGGGAAGAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISPRGVG*SWEESG
Trigger: ACCAGACTCTTCCCAAGAGCACCCGACACCCCTCGG...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCCTTCTGTGTTGCTCCTaGAGGGTCTGCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTRSQMLQIETSPHLNPALLCCS*RVCFSC
Trigger: ACAGCTGAAGCAGACCCTGCAGGAGCAACACAGAAG...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAAGCTGTGGGGGCGGCTTaGTCTCAGAAGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQAVGAA*SQKLRV
Trigger: CACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGC...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAGCTGTGGGGGCGGCTTaGTCTCAGAAGTTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQAVGAA*SQKLRV
Trigger: CACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGC...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTCACGGGTCAGTCACTaGCTGGGCTGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLSRVSH*LGCHLL
Trigger: AAGCAGGTGGCAGCCCAGGCAGTGACTGACCCGTGA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCATCTGTACGTGCAGCTaGAAAGTCCTGCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFICTCS*KVLHPQ
Trigger: TTGAGGATGCAGGACTTTGCAGCTGCACGTACAGAT...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTAGTCCTAGGGAGGGCTaGGCCATGTCCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSSPREG*AMSPLR
Trigger: CCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACT...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAAATGGTGGACGACTGCTaGAGCCTTGACGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQMVDDC*SLDVDP
Trigger: AGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCAT...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTTTCTTCTCTGCCCGTTaGGGCTGTGCCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISFFSAR*GCACWP
Trigger: AGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAA...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATTTCAGGGTTGGTCCTaGGAGGAAAGGCCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQFQGWS*EERPAG
Trigger: ACCAGCGGGCCTTTCCTCCCAGGACCAACCCTGAAA...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAAGATTGCTCTTCCTTTaGCTGTGTTTTTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPRLLFL*LCFSGL
Trigger: CAACCCTGAAAAACACAGCCAAAGGAAGAGCAATCT...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAAGGGTCATGTAACCCATaGAGGGCATGGAGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQGSCNP*RAWSVG
Trigger: ACCGACGCTCCATGCCCTCCATGGGTTACATGACCC...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAGGGTCATGTAACCCATaGAGGGCATGGAGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQGSCNP*RAWSVG
Trigger: ACCGACGCTCCATGCCCTCCATGGGTTACATGACCC...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCCAAGTGCTGGGGCTaGTCTCGGTACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQSKCWG*SRYCSI
Trigger: GATGGAGCAGTACCGAGACCAGCCCCAGCACTTGGA...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTATTTCCTCAGCTGGGGTaGGTGAGGTCGGTACGGCAC +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLFPQLG*VRSVRH
Trigger: GTGCCGTACCGACCTCACCCACCCCAGCTGAGGAAA...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCTCTATAAGGTATCCTaGGGAAGAACCACGCCAATC +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHILYKVS*GRTTPI
Trigger: GATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCACTTGCTGGAGTCTACTaGGAACACCTCTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPLAGVY*EHLFKS
Trigger: AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAG...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCATTTAAACCCAGCCTaGTTGTTTCCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCHLNPA*LFPQTG
Trigger: TCCTGTTTGTGGAAACAATCAGGCTGGGTTTAAATG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTTCTGGTGTCGCTTCATaGGCTCCAGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRSGVAS*APAAPL
Trigger: CAGAGGAGCAGCTGGAGCGCATGAAGCGACACCAGA...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTCCAAGGGAAGACTCCTaGTATCCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRPREDS*YPLSGP
Trigger: GGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGG...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCATGCTCCATCTGTCTGTaGAACACCTCCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPCSICL*NTSSTD
Trigger: ATCTGTGCTGGAGGTGTTGCACAGACAGATGGAGCA...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAAGGCTGGTCTCGGTACTaGTCCATCTGTCTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQGWSRY*SICLCN
Trigger: GTTGCACAGACAGATGGAGCAGTACCGAGACCAGCC...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTCCTGCTCCTGCAGCTaGAAGTCCAGGTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLSCSCS*KSRSAT
Trigger: TGTGGCTGACCTGGACTTGCAGCTGCAGGAGCAGGA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCCGCAGTCGGTAAGCTaGTCCTTCCTCCGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSPQSVS*SFLRPD
Trigger: ATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGAGGGCCAGCTGCTGTaGTGCCACCTGCTTGCTACG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSEGQLL*CHLLAT
Trigger: CGTAGCAAGCAGGTGGCAGCACAGCAGCTGGCCCTC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGATGGTGGACGACTGCTaGAGCCTTGACGTGGACCCT +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLMVDDC*SLDVDP
Trigger: AGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCAT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAAGGTTTAGGGAAACATaGGATTTCAAACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSERFRET*DFKQQG
Trigger: TCCCTGTTGTTTGAAATCCCATGTTTCCCTAAACCT...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGAATTCACTATTTTCTaGAGAAAACTGTCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPEFTIF*RKLSRH
Trigger: GTGACGGGACAGTTTTCTCCAGAAAATAGTGAATTC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCCTCTTCCCAAAGCTGTaGACTTTACTGCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: NYESVGLHEEGSRKVSHILFPKL*TLLLDF
Trigger: AAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGAG...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGATTGCTCTTCCTTTaGCTGTGTTTTTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVRLLFL*LCFSGL
Trigger: CAACCCTGAAAAACACAGCCAAAGGAAGAGCAATCT...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGCCCAGTGCTCCACCTaGGCCAGATTGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISAQCST*ARLLFL
Trigger: AAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAAGCACAGATTCTAGCTaGTCTTTGTTCTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRSTDSS*SLFSLR
Trigger: CCTTAAAGAGAACAAAGACCAGCTAGAATCTGTGCT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGGCAGCTCCTCAAGGCTaGGTGGCTCTTCGGGATCTA +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLAAPQG*VALRDL
Trigger: TAGATCCCGAAGAGCCACCCAGCCTTGAGGAGCTGC...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGACACTGTTCTGGTCCTaGCCTGAGGTCGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLTLFWS*PEVGCR
Trigger: CCTACAGCCGACCTCAGGCCAGGACCAGAACAGTGT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCTCCTTGGAGGAAGCTaGTTCCACTGGGCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSLLGGS*FHWAPG
Trigger: GCCAGGGGCCCAGTGGAACCAGCTTCCTCCAAGGAG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTCCCCTCCTAACATACTaGGCCAAGATCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRPLLTY*AKISRE
Trigger: CTCCCTGGAGATCTTGGCTCAGTATGTTAGGAGGGG...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAGGTCTGGGAGGCTaGTCAGTTTGCTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRAGLGG*SVCLCF
Trigger: GAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGC...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATTGCAGAGAGGCCCTCTaGATACACAGTATATTTTGC +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHCREAL*IHSIFC
Trigger: GCAAAATATACTGTGTATTCAGAGGGCCTCTCTGCA...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTTACCCCTTTGGTGTCTaGGCTAGCAGCTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISYPFGV*ASSCRE
Trigger: CTCTCTGCAGCTGCTAGCTCAGACACCAAAGGGGTA...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACAGCTTTTAAAGATATaGATGTCCTGGGCCTTACCC +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELQLLKI*MSWALP
Trigger: GGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGCTCTTCTTGAAGAATaGATTCACTATTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPALLEE*IHYFLE
Trigger: CTCCAGAAAATAGTGAATTCATTCTTCAAGAAGAGC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAGGATTCGGCTCTTCTTaGAGAATGAATTCACTATTT +
Preference number: 4 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEGFGSS*RMNSLF
Trigger: AAATAGTGAATTCATTCTTCAAGAAGAGCCGAATCC...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTATGGAGCTGTTATAGATaGGCGCTCGCATCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLWSCYR*ALASPC
Trigger: ACACGGGGATGCGAGCGCTCATCTATAACAGCTCCA...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTGGAGCTGTTATAGATaGGCGCTCGCATCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLWSCYR*ALASPC
Trigger: ACACGGGGATGCGAGCGCTCATCTATAACAGCTCCA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR TCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTATCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLSDFDP*EGPGLS
Trigger: TGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGA...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCACTCCACTAGAATTCTaGAGTTCTCTTTATTTGCAC +
Preference number: 4 (lower is better)
Translates to: KSHFLLRSLEVGLASACPTPLEF*SSLYLH
Trigger: GTGCAAATAAAGAGAACTTCAGAATTCTAGTGGAGT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCTTTTGGCAAATGTCATaGAGTCGATACTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFFWQMS*SRYWQH
Trigger: ATGCTGCCAGTATCGACTTCATGACATTTGCCAAAA...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCCCCGCACAGATGTGTaGCGGATGATGGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSPRTDV*RMMVAS
Trigger: AGAGGCCACCATCATCCGGCACACATCTGTGCGGGG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAAAGCAAAGGAGCTTGTaGAATGAATTAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRKQRSL*NELGKE
Trigger: TTCTTTCCCTAATTCATTGCACAAGCTCCTTTGCTT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGGCAATCTTCTCCAAGTaGTGGGGCTGGTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLAIFSK*WGWSRY
Trigger: GTACCGAGACCAGCCCCAGCACTTGGAGAAGATTGC...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATGGGGGCCTGGGAGGTaGTTCATCTTCCTGAACTTT +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQWGPGR*FIFLNF
Trigger: AAAGTTCAGGAAGATGAAGCACCTCCCAGGCCCCCA...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTTGATGATGCGCTCCTaGTCCTGCAGCTGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLLMMRS*SCSCKS
Trigger: GGACTTGCAGCTGCAGGAGCAGGAGCGCATCATCAA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCAGTGTGGAGTTTATTaGTACGATACAATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASQCGVY*YDTMKV
Trigger: AACTTTCATTGTATCGTAGCAATAAACTCCACACTG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTACCGCAGCTCCACCCTaGAATCCCCATTCACACACT +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRTAAPP*NPHSHT
Trigger: AGTGTGTGAATGGGGATTCCAGGGTGGAGCTGCGGT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGACCGCAGCTCCACCCTaGAATCCCCATTCACACACT +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLTAAPP*NPHSHT
Trigger: AGTGTGTGAATGGGGATTCCAGGGTGGAGCTGCGGT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGGTTTAGGGAAACATaGGATTTCAAACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVRFRET*DFKQQG
Trigger: TCCCTGTTGTTTGAAATCCCATGTTTCCCTAAACCT...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATGTGTTTTTCAGGGTTaGTCCTGGGAGGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQCVFQG*SWEERP
Trigger: GGGCCTTTCCTCCCAGGACCAACCCTGAAAAACACA...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGCACAGATTCTAGCTaGTCTTTGTTCTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVSTDSS*SLFSLR
Trigger: CCTTAAAGAGAACAAAGACCAGCTAGAATCTGTGCT...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTAGCTCAGCTCGGATATaGACAAGGTCCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRSSARI*TRSSCS
Trigger: GCTGCAGGAGGACCTTGTCCATATCCGAGCTGAGCT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCACATTTTCCATCTCAGTaGACTCTCTGGAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPHFPSQ*TLWRAQ
Trigger: CTGAGCTCTCCAGAGAGTCCACTGAGATGGAAAATG...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTAGGGCAGCAGAAAGGTaGGTCACATCTGGGAACACT +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRRAAER*VTSGNT
Trigger: AGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCACAGCTTTTAAAGATATaGATGTCCTGGGCCTTACCC +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPQLLKI*MSWALP
Trigger: GGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTG...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGTCACCCAGAAGTACCTaGATCTGTACGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLSPRST*ICTCSC
Trigger: GCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGA...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTTCGAGACAGCACCTGTaGAGCCTGGTTCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSSRQHL*SLVHGP
Trigger: AGGGCCATGAACCAGGCTGCACAGGTGCTGTCTCGA...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCCAAGGGAAGACTCCTaGTATCCCCTTTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSPREDS*YPLSGP
Trigger: GGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTTGCTCCTGCAGGGTCTaGTTCAGCTGTTCCACATCA +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISCSCRV*FSCSTS
Trigger: TGATGTGGAACAGCTGAAGCAGACCCTGCAGGAGCA...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTCTTCTGTGTTGCTCCTaGAGGGTCTGCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRLLCCS*RVCFSC
Trigger: ACAGCTGAAGCAGACCCTGCAGGAGCAACACAGAAG...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCATCCTCAACCTTCCTaGCACTCAGCCCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSHPQPS*HSALEG
Trigger: CCCCTCAAGGGCTGAGTGGCAGGAAGGTTGAGGATG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATACACTCAACAGGCTATaGAGACAAGAACCGCTATTA +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHTLNRL*RQEPLL
Trigger: TAATAGCGGTTCTTGTCTCCATAGCCTGTTGAGTGT...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCAAGGTGAGTCACATCTaGGAACACTCAACAGGCTAT +
Preference number: 4 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSKVSHI*EHSTGY
Trigger: ATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTT...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATAGATTGCTCTTCCTTTaGCTGTGTTTTTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHRLLFL*LCFSGL
Trigger: CAACCCTGAAAAACACAGCCAAAGGAAGAGCAATCT...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTTGGCGAGGAAGCGTCTaGTCCAAGGGAAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSWRGSV*SKGRLL
Trigger: CAGGAGTCTTCCCTTGGACCAGACGCTTCCTCGCCA...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCAGCACAGATTCTAGCTaGTCTTTGTTCTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFSTDSS*SLFSLR
Trigger: CCTTAAAGAGAACAAAGACCAGCTAGAATCTGTGCT...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCAGTGGACTCTCTaGAGAGCTCAGCTCGGATAT +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQSQWTL*RAQLGY
Trigger: ATATCCGAGCTGAGCTCTCCAGAGAGTCCACTGAGA...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGCAGCTCCTCAAGGCTaGGTGGCTCTTCGGGATCTA +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSAAPQG*VALRDL
Trigger: TAGATCCCGAAGAGCCACCCAGCCTTGAGGAGCTGC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTACAAGAGCCTTTTGCTaGAGGAAGCCTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSTRAFC*RKPGGR
Trigger: CCTGCCCCCAGGCTTCCTCCAGCAAAAGGCTCTTGT...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCCACTCAGGCCTGCAGTaGCATCTTCAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSHSGLQ*HLQFSI
Trigger: TATGGAGAATTGAAGATGTCACTGCAGGCCTGAGTG...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCATTCCATTCTTCTCTaGCCGTTGGGGCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSHSILL*PLGLCL
Trigger: CAGGCACAGCCCCAACGGGCAGAGAAGAATGGAATG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAATTTGCACTCAGGCCTaGAGTGACATCTTCAATTCT +
Preference number: 4 (lower is better)
Translates to: SWENVFKRAISEVPVYCPICTQA*SDIFNS
Trigger: AGAATTGAAGATGTCACTGCAGGCCTGAGTGCAAAT...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAATTTCCTCAGGCTCCTaGGCCTGTTTGATCCTCACT +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLISSGS*ACLILT
Trigger: AGTGAGGATCAAACAGGCCCAGGAGCCTGAGGAAAT...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGGTGTCGGGTGCTCTTaGGAAGAGTCTGGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISGVGCS*EESGSF
Trigger: AAAACTACCAGACTCTTCCCAAGAGCACCCGACACC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTATCTCAGTGGACTCTCTaGAGAGCTCAGCTCGGATAT +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLSQWTL*RAQLGY
Trigger: ATATCCGAGCTGAGCTCTCCAGAGAGTCCACTGAGA...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAACATTTTCCATCTCAGTaGACTCTCTGGAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQHFPSQ*TLWRAQ
Trigger: CTGAGCTCTCCAGAGAGTCCACTGAGATGGAAAATG...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
3UTR CAA 72 bp GGATTTCTAGGTAGATGTCACCCAGTGTGGAGTTTATaGCTACGATACAATGAAAGTTGCTTCCTCTCACCT +
Preference number: 4 (lower is better)
Translates to: GFLGRCHPVWSL*LRYNESCFLSP
Trigger: AGGTGAGAGGAAGCAACTTTCATTGTATCGTAGCAATAAACTCCACACTGGGTGACATCTACCTAGAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGGATTAGAGAGGCAATaGGCGGTAACACTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSGLERQ*AVTLKA
Trigger: TGCTTTTAGTGTTACCGCTCATTGCCTCTCTAATCC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGCACTCAGGCCTGCAGTaGCATCTTCAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLHSGLQ*HLQFSI
Trigger: TATGGAGAATTGAAGATGTCACTGCAGGCCTGAGTG...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR TCA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAACTCCACTAGAATTCTaGAGTTCTCTTTATTTGCAC +
Preference number: 4 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELTPLEF*SSLYLH
Trigger: GTGCAAATAAAGAGAACTTCAGAATTCTAGTGGAGT...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTTGCTCCTGCAGGGTCTaGTTCAGCTGTTCCACATCA +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSCSCRV*FSCSTS
Trigger: TGATGTGGAACAGCTGAAGCAGACCCTGCAGGAGCA...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCTTCTGTGTTGCTCCTaGAGGGTCTGCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSLLCCS*RVCFSC
Trigger: ACAGCTGAAGCAGACCCTGCAGGAGCAACACAGAAG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR GCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTACCCGTTCCAGCAACTaGAGGTCAAAGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSTRSSN*RSKSCS
Trigger: TGAGCAGGACTTTGACCTGCAGTTGCTGGAACGGGT...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTAACCATGTAGGTCAATaGACAGCTCTCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: IKTEQPQSWENVFKRAISNHVGQ*TALSLG
Trigger: TCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTT...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTAACCATGTAGGTCAATaGACAGCTCTCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRNHVGQ*TALSLG
Trigger: TCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CCA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTATGCTGGACGGTCTTTaGTTTCTGTCTTGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRMLDGL*FLSCFD
Trigger: GTCGAAGCAAGACAGAAACCAAAGACCGTCCAGCAT...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCCATGTTTATTGGCGTTaGTGCAGAGACTTACACAAG +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSHVYWR*CRDLHK
Trigger: CTTGTGTAAGTCTCTGCATCAACGCCAATAAACATG...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGAATCTCACTTTCTCCTaGGGTCATTGGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLNLTFS*GHWKLD
Trigger: GTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTTGCTTCGACATATGTaGATTCGGCTCTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSLLRHM*IRLFLK
Trigger: CTTCAAGAAGAGCCGAATCCACATATGTCGAAGCAA...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTAGTCACTGCCTGGGTTaGAAGGTGTTAGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSSHCLG*KVLDKG
Trigger: ACCTTTGTCTAACACCTTCCAACCCAGGCAGTGACT...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS-3UTR TCA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGGGATTCGGCTCTTCTTaGAGAATGAATTCACTATTT +
Preference number: 4 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLGFGSS*RMNSLF
Trigger: AAATAGTGAATTCATTCTTCAAGAAGAGCCGAATCC...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR GCA 90 bp ACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAAGCAAAGGAGCTTGTaGAATGAATTAGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: THFLTRSQMLQIETSPHLKQRSL*NELGKE
Trigger: TTCTTTCCCTAATTCATTGCACAAGCTCCTTTGCTT...TAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCTTGCTGGAGTCTACTaGGAACACCTCTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSLAGVY*EHLFKS
Trigger: AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CCA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTAGATGTCACCCAGTGTaGAGTTTATTGCTACGATAC +
Preference number: 4 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSRCHPV*SLLLRY
Trigger: GTATCGTAGCAATAAACTCCACACTGGGTGACATCT...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
3UTR CAA 72 bp ATACAGTGTATTTTACAGTGTATATCAAAAGTGCCTTaGCCATTCATATGTAGAGAGGAGTCTGAGCTAAAC +
Preference number: 4 (lower is better)
Translates to: IQCILQCISKVP*PFICREESELN
Trigger: GTTTAGCTCAGACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATACACTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS TCA 90 bp CCTCCCAGCCGCGGGGCAGGTCTGAGCGGATCATGTGGCCCGAGTTaGCGGGCTCCCCGGTGCGCGGATGCAGCCAGGTCGTGCAGCGGA +
Preference number: 5 (lower is better)
Translates to: PPSRGAGLSGSCGPS*RAPRCADAARSCSG
Trigger: TCCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAACTCGGGCCACATGATCCGCTCAGACCTGCCCCGCGGCTGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS-3UTR CAA 90 bp CTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGCTGCTCGACGTGGACCCCGAGTaGACGGGCTCCCCGGTGCGC +
Preference number: 5 (lower is better)
Translates to: LALSDQGLLVSLHALQLLDVDPE*TGSPVR
Trigger: GCGCACCGGGGAGCCCGTCAACTCGGGGTCCACGTC...GAGCAGCTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS GCA 90 bp CCTCGGCTGGCGAGTACGGAGACCTGGCCTTGCTCCGGTCCCGCTTaGCCTCCAGTGGGTCCCTCTGGGAACGGTACTGCTCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: PRLASTETWPCSGPA*PPVGPSGNGTALPP
Trigger: AGGAGGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCCAGCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 90 bp CCAGGGAGGGCCCTGCCTTACCTCTGCCTGGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTCCTAGGGAGGGCTGGGCCATGTCCC +
Preference number: 5 (lower is better)
Translates to: PGRALPYLCLAASGT*SQGPQVLGRAGPCP
Trigger: GGGACATGGCCCAGCCCTCCCTAGGACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGTAAGGCAGGGCCCTCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS-3UTR CAA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGTGGCCCAGTGTCCTCTaGCGCTCTCGGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGWPSVL*RSRTRA
Trigger: GGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCA...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS TCA 90 bp CCTGCTCACGCTTCCATGAGCCAAGATCTCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCAGGCCCGTCCTCTCCCCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: PAHASMSQDLQGAAG*GSEMRAGPSSPLGP
Trigger: TGGGCCAAGGGGAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTGGAGATCTTGGCTCATGGAAGCGTGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 90 bp CGCTTCCTCTCGTCTGACTGCCGCTTGAGGCCCCGCACAGATGTGTaGCGGATGATGGTGGCCTCTCTTGGCAGAGGCGGCACAGCCGGG +
Preference number: 5 (lower is better)
Translates to: RFLSSDCRLRPRTDV*RMMVASLGRGGTAG
Trigger: CCCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATCATCCGGCACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS GCA 90 bp GTCCACACTCCTCCTCTGGTCCGGTGGCTTCACTGTGACTCGCTCTaGTGGTGTGTGTGGCCGCCGGGGTGGGAAGACCCTTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VHTPPLVRWLHCDSL*WCVWPPGWEDPWGS
Trigger: GGACCCCCAAGGGTCTTCCCACCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp CTTGAGGCCCCGCACAGATGTGTGCCGGATGATGGTGGCCTCTCTTaGCAGAGGCGGCACAGCCGGGGGCTGGTCCTCTGGGCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: LEAPHRCVPDDGGLS*QRRHSRGLVLWAVE
Trigger: CTCTACAGCCCAGAGGACCAGCCCCCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATCATCCGGCACACATCTGTGCGGGGCCTCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS CCA 90 bp CGAGTACGGAGACCTGGCCTTGCTCCGGTCCCGCTTGCCCTCCAGTaGGTCCCTCTGGGAACGGTACTGCTCTCCCTCCTGCTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: RVRRPGLAPVPLALQ*VPLGTVLLSLLLLP
Trigger: AGGCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp ACAGAGATGGAGCGGGGCACCTCTAGCATGCTCCTGCTCCGGCCCTaGTCGGTGAACTCTGGGGAGCCAAGGCAGATGGGCGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: TEMERGTSSMLLLRP*SVNSGEPRQMGAVG
Trigger: CCCCACAGCGCCCATCTGCCTTGGCTCCCCAGAGTTCACCGACCAGGGCCGGAGCAGGAGCATGCTAGAGGTGCCCCGCTCCATCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp CACACTCCTCCTCTGGTCCGGTGGCTTCACTGTGACTCGCTCTGCTaGTGTGTGTGGCCGCCGGGGTGGGAAGACCCTTGGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: HTPPLVRWLHCDSLC*CVWPPGWEDPWGSW
Trigger: CCAGGACCCCCAAGGGTCTTCCCACCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS-3UTR CAA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTTGGCCCAGTGTCCTCTaGCGCTCTCGGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGWPSVL*RSRTRA
Trigger: GGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCA...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGAGACCAGTGGCCCTaGGGGCAGGGGTGTGACCCC +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSGDQWP*GQGCDP
Trigger: GGGGTCACACCCCTGCCCCAAGGGCCACTGGTCTCC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATTGCTCCGGTCCCGCTaGCCCTCCAGTGGGTCCCTC +
Preference number: 5 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLELLRSR*PSSGSL
Trigger: GAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS TCA 90 bp CCAGCGAGATGTCCACACTCCTCCTCTGGTCCGGTGGCTTCACTGTaGCTCGCTCTGCTGGTGTGTGTGGCCGCCGGGGTGGGAAGACCC +
Preference number: 5 (lower is better)
Translates to: PARCPHSSSGPVASL*LALLVCVAAGVGRP
Trigger: GGGTCTTCCCACCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACATCTCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS TCA 90 bp CAAAGCCTCTCTTCCCTGAGCCAAGATCTCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCAGGCCCGTCCTCTCCCCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: QSLSSLSQDLQGAAG*GSEMRAGPSSPLGP
Trigger: TGGGCCAAGGGGAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTGGAGATCTTGGCTCAGGGAAGAGAGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533901.1
CDS CCA 90 bp AGCGTCTGGTACCTGCTCTCAGGGCCCACAAGTCCTAGGGAGGGCTaGGCCATGTCCCCGCTGAGGGTCGCCAGCTCAGGCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: SVWYLLSGPTSPREG*AMSPLRVASSGSLT
Trigger: TGTCAGTGAGCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACTTGTGGGCCCTGAGAGCAGGTACCAGACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS CCA 90 bp GACCTGGCCTTGCTCCGGTCCCGCTTGCCCTCCAGTGGGTCCCTCTaGGAACGGTACTGCTCTCCCTCCTGCTCCTGCCTCTCGAAGTTG +
Preference number: 5 (lower is better)
Translates to: DLALLRSRLPSSGSL*ERYCSPSCSCLSKL
Trigger: CAACTTCGAGAGGCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp AGAAACTCCAGGGAGGGCCCTGCCTTACCTCTGCCTGGCAGCGTCTaGTACCTGCTCTCAGGGCCCACAAGTCCTAGGGAGGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RNSREGPALPLPGSV*YLLSGPTSPREGWA
Trigger: GGCCCAGCCCTCCCTAGGACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGTAAGGCAGGGCCCTCCCTGGAGTTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS-3UTR CAA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCTGGCCCAGTGTCCTCTaGCGCTCTCGGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPWPSVL*RSRTRA
Trigger: GGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCA...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000532079.1
ENST00000636113.1
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGCCCGTCCTCTCCCCTaGGCCCAGTGTCCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEARPLP*AQCPLA
Trigger: CGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGGC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCGCCCGTCCTCTCCCCTaGGCCCAGTGTCCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: QCPLALSDQGLLVSLHALARPLP*AQCPLA
Trigger: CGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGGC...GAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGCCCGTCCTCTCCCCTaGGCCCAGTGTCCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSARPLP*AQCPLA
Trigger: CGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGGC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGCGTCAGGCAGCAGGTaGGCTCAGGCTTGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGASGSR*AQACGV
Trigger: CACCCCACAAGCCTGAGCCAACCTGCTGCCTGACGC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGGCCCCGTGCCCTCCTaGGAGAATCCCCCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPGPVPS*ENPPAR
Trigger: TCTCGCTGGGGGATTCTCCAAGGAGGGCACGGGGCC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS GCA 90 bp TTCACACACTGCCCCAGCTCCCGGTCTCGCTTCCTCTCGTCTGACTaGCGCTTGAGGCCCCGCACAGATGTGTGCCGGATGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: FTHCPSSRSRFLSSD*RLRPRTDVCRMMVA
Trigger: GGCCACCATCATCCGGCACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGAGACCGGGAGCTGGGGCAGTGTGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS GCA 90 bp GAGCGGATCATGTGGCCCGAGTTGACGGGCTCCCCGGTGCGCGGATaGAGCCAGGTCGTGCAGCGGAGCTGGTCATTGATGAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: ERIMWPELTGSPVRG*SQVVQRSWSLMKKT
Trigger: CGTCTTCTTCATCAATGACCAGCTCCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAACTCGGGCCACATGATCCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS GCA 90 bp CGGGCGAGGATGTTGCGGATCTTCTCGGCTTTGCGGTACCGCGCCTaGAGCTCCTCAAGGCTGGGTGGCTCTTCGGGATCTAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: RARMLRIFSALRYRA*SSSRLGGSSGSSST
Trigger: CGTGGAGCTAGATCCCGAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 90 bp CTTGGAGGAAGCTGGTTCCACTGGGCCCCTGGCTCCAGGCTTCTTTaGATGCTGGGTCACGGGTCAGTCACTGCCTGGGCTGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: LGGSWFHWAPGSRLL*MLGHGSVTAWAATC
Trigger: GCAGGTGGCAGCCCAGGCAGTGACTGACCCGTGACCCAGCATGCAAAGAAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCTTCCTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS GCA 90 bp AGCCTTGACGTGGACCCCGAGTTGACGGGCTCCCCGGTGCGCGGATaGAGCCAGGTCGTGCAGCGGAGCTGGTCATTGATGAAGAAGACG +
Preference number: 5 (lower is better)
Translates to: SLDVDPELTGSPVRG*SQVVQRSWSLMKKT
Trigger: CGTCTTCTTCATCAATGACCAGCTCCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAACTCGGGGTCCACGTCAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS CCA 90 bp GTCCGGGTCCCACCCGGCCACATTCGTGACAGGACTCTGTGTGGTTaGCCTGGGGGACAGCCTGCCGCTCCACCTTCTCCATATCCCTCT +
Preference number: 5 (lower is better)
Translates to: VRVPPGHIRDRTLCG*PGGQPAAPPSPYPS
Trigger: AGAGGGATATGGAGAAGGTGGAGCGGCAGGCTGTCCCCCAGGCCAACCACACAGAGTCCTGTCACGAATGTGGCCGGGTGGGACCCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp TGGAGAATCCCCCAGCGAGATGTCCACACTCCTCCTCTGGTCCGGTaGCTTCACTGTGACTCGCTCTGCTGGTGTGTGTGGCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: WRIPQRDVHTPPLVR*LHCDSLCWCVWPPG
Trigger: CCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACATCTCGCTGGGGGATTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS-3UTR CAA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTTCGTCTGACTGCCGCTaGAGGCCCCGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGSSDCR*RPRTDV
Trigger: CACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGA...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGCGTCAGGCAGCAGGTaGGCTCAGGCTTGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPASGSR*AQACGV
Trigger: CACCCCACAAGCCTGAGCCAACCTGCTGCCTGACGC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAAGAGGTCGGCTGTAGGTaGCACATGCTTGACCGGGCG +
Preference number: 5 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLEEVGCR*HMLDRA
Trigger: CGCCCGGTCAAGCATGTGCAACCTACAGCCGACCTC...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS TCA 90 bp CCCATTCACACACTGCCCCAGCTCCCGGTCTCGCTTCCTCTCGTCTaGCTGCCGCTTGAGGCCCCGCACAGATGTGTGCCGGATGATGGT +
Preference number: 5 (lower is better)
Translates to: PIHTLPQLPVSLPLV*LPLEAPHRCVPDDG
Trigger: ACCATCATCCGGCACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGAGACCGGGAGCTGGGGCAGTGTGTGAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS GCA 90 bp GATGGCCAAGGTGGTGGCAGCCACCCAGCACTCCGGCCTACAGGGTaGAGTGACTCTGGAGCCAGAGCACTGGGATTGTCTTCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: DGQGGGSHPALRPTG*SDSGARALGLSSGS
Trigger: GGAACCGGAAGACAATCCCAGTGCTCTGGCTCCAGAGTCACTGCACCCTGTAGGCCGGAGTGCTGGGTGGCTGCCACCACCTTGGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS GCA 90 bp TGCACATGCTTGACCGGGCGAGGATGTTGCGGATCTTCTCGGCTTTaGGGTACCGCGCCTGCAGCTCCTCAAGGCTGGGTGGCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: CTCLTGRGCCGSSRL*GTAPAAPQGWVALR
Trigger: CCGAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTCAAGCATGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CCA 90 bp AGAGTCGAACCTCCAGAGGGGTCCGCACAGGGCTGGTGGGAGGACTaGGCTGTGGGGGCGGCTTGCTCTCAGAAGTTGAGAGTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RVEPPEGSAQGWWED*AVGAACSQKLRVKA
Trigger: TGCCTTCACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCCCTCTGGAGGTTCGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355661.7
ENST00000525177.1
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000636090.1
ENST00000636113.1
CDS CCA 90 bp CTGTGGTCTGCTGGTTATGGCGAGTGCCTACTTGCTGTCCGGCACTaGGGCAAGGGGTCAAAGGCAGTGTCTGGCCTCCCGGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LWSAGYGECLLAVRH*GKGSKAVSGLPELS
Trigger: GCTGAGCTCCGGGAGGCCAGACACTGCCTTTGACCCCTTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS CCA 90 bp TGTGTTAGACTCCTCATCAGCTCCTGCAGCACCAGATGCCCCATTTaGCAGGCTGGGGTGGCATGGGCCCTGCTGCCCACCACGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CVRLLISSCSTRCPI*QAGVAWALLPTTKG
Trigger: GCCCTTCGTGGTGGGCAGCAGGGCCCATGCCACCCCAGCCTGCCAAATGGGGCATCTGGTGCTGCAGGAGCTGATGAGGAGTCTAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTTCGTCTGACTGCCGCTaGAGGCCCCGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSSSDCR*RPRTDV
Trigger: CACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGA...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCCGTCCTCTCCCCTTGGCCCAGTGTCCTCTTGCGCTCTCGGACCAGGGCCTTCCTAGGGAAGGTCGCCTaGCTGCTTTCGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: PVLSPWPSVLLRSRTRAFLGKVA*LLSALR
Trigger: TCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAG...GAAGGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS GCA 90 bp GGTGGGATTCCCAGAGAAACTCCAGGGAGGGCCCTGCCTTACCTCTaGCTGGCAGCGTCTGGTACCTGCTCTCAGGGCCCACAAGTCCTA +
Preference number: 5 (lower is better)
Translates to: GGIPRETPGRALPYL*LAASGTCSQGPQVL
Trigger: TAGGACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGTAAGGCAGGGCCCTCCCTGGAGTTTCTCTGGGAATCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 90 bp CATCCCGGTGCGCCCGGCGCTCTTCACTCGACATCTTCAGGTGGCTaGCTCGGTCCTGCGCATACTTGTAGTCACTTGGCAGGTTTCGGG +
Preference number: 5 (lower is better)
Translates to: HPGAPGALHSTSSGG*LGPAHTCSHLAGFG
Trigger: CCCGAAACCTGCCAAGTGACTACAAGTATGCGCAGGACCGAGCCAGCCACCTGAAGATGTCGAGTGAAGAGCGCCGGGCGCACCGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp GCCCTCCTTGGAGAATCCCCCAGCGAGATGTCCACACTCCTCCTCTaGTCCGGTGGCTTCACTGTGACTCGCTCTGCTGGTGTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: ALLGESPSEMSTLLL*SGGFTVTRSAGVCG
Trigger: GCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACATCTCGCTGGGGGATTCTCCAAGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp GGCCTAGAGCTGCAGGCAGAAGGGTACGAGGCACCAGCTGAAGGCTaGAAGCAGTGTGGTGGGATTCCCAGAGAAACTCCAGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GLELQAEGYEAPAEG*KQCGGIPRETPGRA
Trigger: GGCCCTCCCTGGAGTTTCTCTGGGAATCCCACCACACTGCTTCCAGCCTTCAGCTGGTGCCTCGTACCCTTCTGCCTGCAGCTCTAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 90 bp GGATCTTCTCGGCTTTGCGGTACCGCGCCTGCAGCTCCTCAAGGCTaGGTGGCTCTTCGGGATCTAGCTCCACGTAGCGCTCAGGGATTG +
Preference number: 5 (lower is better)
Translates to: GSSRLCGTAPAAPQG*VALRDLAPRSAQGL
Trigger: CAATCCCTGAGCGCTACGTGGAGCTAGATCCCGAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CCA 90 bp TGCTCCTGCAGCTGCAAGTCCAGGTCAGCCACACTGTTCTGGTCCTaGCCTGAGGTCGGCTGTAGGTTGCACATGCTTGACCGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: CSCSCKSRSATLFWS*PEVGCRLHMLDRAR
Trigger: CCTCGCCCGGTCAAGCATGTGCAACCTACAGCCGACCTCAGGCCAGGACCAGAACAGTGTGGCTGACCTGGACTTGCAGCTGCAGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS-3UTR CAA 90 bp GTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGCTTGCTGCTTTCGGCATaGAGACCCCTCCGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: VLLRSRTRAFWCRFMRSSLLLSA*RPLRSV
Trigger: CACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAA...GCTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR CAA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGGGCTCCTGGGCCTGTTaGATCCTCACTCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRGSWAC*ILTPAL
Trigger: CAGAGCTGGAGTGAGGATCAAACAGGCCCAGGAGCC...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGGCTCCTGGGCCTGTTaGATCCTCACTCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEGSWAC*ILTPAL
Trigger: CAGAGCTGGAGTGAGGATCAAACAGGCCCAGGAGCC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCAGGTTGGCTCAGGCTaGTGGGGTGGCTTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSQVGSG*WGGFWD
Trigger: GTCCCAAAAGCCACCCCACAAGCCTGAGCCAACCTG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCCAGGACTCTGTGTGGTaGGCCTGGGGGACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIQDSVW*AWGTAC
Trigger: GCAGGCTGTCCCCCAGGCCAACCACACAGAGTCCTG...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGGCTGTGGGGGCGGCTaGCTCTCAGAAGTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEGCGGG*LSEVES
Trigger: ACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGTACGGCACGTAGGTTaGCAGCTGGGGGAAGAGTCG +
Preference number: 5 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPVRHVG*QLGEES
Trigger: CGACTCTTCCCCCAGCTGCAAACCTACGTGCCGTAC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS TCA 90 bp TCCCTGCAGATCTGTGGACCACCCCAGGCTTCCCTTACATGCAGATaGCTGGGCTGCCTGGCAGGTAGAAAGGCTGGCGGGGCAGGAATG +
Preference number: 5 (lower is better)
Translates to: SLQICGPPQASLTCR*LGCLAGRKAGGAGM
Trigger: CATTCCTGCCCCGCCAGCCTTTCTACCTGCCAGGCAGCCCAGTCATCTGCATGTAAGGGAAGCCTGGGGTGGTCCACAGATCTGCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS TCA 90 bp CAGCCTGGCAGGTGGGAAAGGTCAGCTGGTGCTGCAGTAACTGGCTaGTGGCGAAATTTCGCACACTGGCCAACTTGGCCTGGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: QPGRWERSAGAAVTG*WRNFAHWPTWPGAA
Trigger: GGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTTACTGCAGCACCAGCTGACCTTTCCCACCTGCCAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS GCA 90 bp CTCCGGTCCCGCTTGCCCTCCAGTGGGTCCCTCTGGGAACGGTACTaGTCTCCCTCCTGCTCCTGCCTCTCGAAGTTGACAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LRSRLPSSGSLWERY*SPSCSCLSKLTMSS
Trigger: TGATGACATTGTCAACTTCGAGAGGCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 90 bp ATTAAGCGGTGTGTTAGACTCCTCATCAGCTCCTGCAGCACCAGATaGCCCATTTGGCAGGCTGGGGTGGCATGGGCCCTGCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: IKRCVRLLISSCSTR*PIWQAGVAWALLPT
Trigger: GGTGGGCAGCAGGGCCCATGCCACCCCAGCCTGCCAAATGGGGCATCTGGTGCTGCAGGAGCTGATGAGGAGTCTAACACACCGCTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CCA 90 bp TGCGGCTTATGCGATCCTCAGGGGCCACAGGAGAGATCACGTAGCTaGGCAAGGGGATGCTCCCGAGGACCGCTTCTTCTCGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: CGLCDPQGPQERSRS*ARGCSRGPLLLGCL
Trigger: AAGACAGCCGAGAAGAAGCGGTCCTCGGGAGCATCCCCTTGCCCAGCTACGTGATCTCTCCTGTGGCCCCTGAGGATCGCATAAGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp TGGGCCCTTGCCCAGTGCTCCACCTGGGCCAGATTGCTCTTCCTTTaGCTGTGTTTTTCAGGGTTGGTCCTGGGAGGAAAGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: WALAQCSTWARLLFL*LCFSGLVLGGKARW
Trigger: CCAGCGGGCCTTTCCTCCCAGGACCAACCCTGAAAAACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS-3UTR CAA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACTAGGGAAGGTCGCCTaGCTGCTTTCGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLELGKVA*LLSALR
Trigger: TCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCTGGGCCTTACCCCTTaGGTGTCTGAGCTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWELGLTP*VSELAA
Trigger: AGCTGCTAGCTCAGACACCAAAGGGGTAAGGCCCAG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp TGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGGGAGGCTGGGCCTTACCCCTTaGGTGTCTGAGCTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: CDPVLHHPHTASAGRSGRLGLTP*VSELAA
Trigger: AGCTGCTAGCTCAGACACCAAAGGGGTAAGGCCCAG...CCTCCCAGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCTGGGCCTTACCCCTTaGGTGTCTGAGCTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSLGLTP*VSELAA
Trigger: AGCTGCTAGCTCAGACACCAAAGGGGTAAGGCCCAG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCAGCGGAGCTGGTCATaGATGAAGAAGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEQRSWS*MKKTRP
Trigger: TGGCCGCGTCTTCTTCATCAATGACCAGCTCCGCTG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCAGCGGAGCTGGTCATaGATGAAGAAGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPQRSWS*MKKTRP
Trigger: TGGCCGCGTCTTCTTCATCAATGACCAGCTCCGCTG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000532079.1
CDS-3UTR CAA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAACTGGACTTTATGATCTaGGGTCCAGGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLELDFMI*GPGLAS
Trigger: GGAGGCCAAGCCTGGACCCAAGATCATAAAGTCCAG...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTACGGAGACCTGGCCTaGCTCCGGTCCCGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEYGDLA*LRSRLP
Trigger: GGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTATTCTTCTCTGCCCGTaGGGGCTGTGCCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSILLCP*GLCLLA
Trigger: GGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAAT...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGTGTTTTTCAGGGTaGGTCCTGGGAGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGLCFSG*VLGGKA
Trigger: GGCCTTTCCTCCCAGGACCAACCCTGAAAAACACAG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp AAGGGACCTAAGGTGACTGTGGACAGGGCGCAGCGCCAGGAAGCGCCACCAGGGCTGGAGGACCCTGTCTaGTTCACAGAAGATGCTCAG +
Preference number: 5 (lower is better)
Translates to: KGPKVTVDRAQRQEAPPGLEDPV*FTEDAQ
Trigger: CTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAG...CCCTGGTGGCGCTTCCTGGCGCTGCGCCCTGTCCACAGTCACCTTAGGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTGGGCTGCCACCTGCTaGCTACGCTGGGAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDWAATC*LRWEAS
Trigger: CGAGGCCTCCCAGCGTAGCAAGCAGGTGGCAGCCCA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS TCA 90 bp TGGCATAGGAGCCTGACCCGCGCCTTCACTTACTGCGCCCCAATCTaGCATGGACTGATCCTACAGACCCAGGGTAACCTGGCTGGTGCG +
Preference number: 5 (lower is better)
Translates to: WHRSLTRAFTYCAPI*HGLILQTQGNLAGA
Trigger: CGCACCAGCCAGGTTACCCTGGGTCTGTAGGATCAGTCCATGTCAGATTGGGGCGCAGTAAGTGAAGGCGCGGGTCAGGCTCCTATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS TCA 90 bp CAGTGTCGCTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCATGCTTCTCCTGGGCCGACAGCCCC +
Preference number: 5 (lower is better)
Translates to: QCRSQRSSQASDFDP*EGPGLSCFSWADSP
Trigger: GGGGCTGTCGGCCCAGGAGAAGCATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS GCA 90 bp CGTCTGGTCCAAGGGAAGACTCCTGCTATCCCCTTTCTGGGCCCTTaGCCAGTGCTCCACCTGGGCCAGATTGCTCTTCCTTTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RLVQGKTPAIPFLGP*PVLHLGQIALPLAV
Trigger: CACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGGACCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS GCA 90 bp GGATGCCTGAATGCTGTGGTCTGCTGGTTATGGCGAGTGCCTACTTaGTGTCCGGCACTGGGGCAAGGGGTCAAAGGCAGTGTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: GCLNAVVCWLWRVPT*CPALGQGVKGSVWP
Trigger: AGGCCAGACACTGCCTTTGACCCCTTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS GCA 90 bp GATGACTGGGCTGCCTGGCAGGTAGAAAGGCTGGCGGGGCAGGAATaGCTTTCACCCCCTGATCCATTCTTAGGCACCCTGCACAACCCA +
Preference number: 5 (lower is better)
Translates to: DDWAAWQVERLAGQE*LSPPDPFLGTLHNP
Trigger: TGGGTTGTGCAGGGTGCCTAAGAATGGATCAGGGGGTGAAAGGCATTCCTGCCCCGCCAGCCTTTCTACCTGCCAGGCAGCCCAGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 90 bp TCTGGGAAGGACAGGGATTGGCCAGGACCCTGGCGAGGAAGCGTCTaGTCCAAGGGAAGACTGAGGAGAAAGGGTAAGAACGGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: SGKDRDWPGPWRGSV*SKGRLRRKGKNGSG
Trigger: GCCTGACCCGTTCTTACCCTTTCTCCTCAGTCTTCCCTTGGACCAGACGCTTCCTCGCCAGGGTCCTGGCCAATCCCTGTCCTTCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525781.5
CDS CCA 90 bp TGCAGATCTGTGGACCACCCCAGGCTTCCCTTACATGCAGATGACTaGGCTGCCTGGCAGGTAGAAAGGCTGGCGGGGCAGGAATGCCTT +
Preference number: 5 (lower is better)
Translates to: CRSVDHPRLPLHADD*AAWQVERLAGQECL
Trigger: AAGGCATTCCTGCCCCGCCAGCCTTTCTACCTGCCAGGCAGCCCAGTCATCTGCATGTAAGGGAAGCCTGGGGTGGTCCACAGATCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCTAGGGAAGGTCGCCTaGCTGCTTTCGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWELGKVA*LLSALR
Trigger: TCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCTGGCCCAGTGTCCTCTaGCGCTCTCGGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASWPSVL*RSRTRA
Trigger: GGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCA...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TGTCCTCTTGCGCTCTCGGACCAGGGCCTTCTGGTGTCGCTTCATGCGCTCCAGGGAGGTGTGATGTGCTaGTGTTTGGGGGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: CPLALSDQGLLVSLHALQGGVMC*CLGDSE
Trigger: CTCAGAGTCCCCCAAACACAAGCACATCACACCTCC...CTGGAGCGCATGAAGCGACACCAGAAGGCCCTGGTCCGAGAGCGCAAGAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCAGGACTCTGTGTGGTaGGCCTGGGGGACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEQDSVW*AWGTAC
Trigger: GCAGGCTGTCCCCCAGGCCAACCACACAGAGTCCTG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGTCCACCTGGGCCAGATaGCTCTTCCTTTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWESTWAR*LFLWLC
Trigger: ACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGA...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGCTTGCTCTCAGAAGTaGAGAGTGAAGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEACSQK*RVKAQA
Trigger: CGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGCTTGCTCTCAGAAGTaGAGAGTGAAGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSACSQK*RVKAQA
Trigger: CGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGTACGGCACGTAGGTTaGCAGCTGGGGGAAGAGTCG +
Preference number: 5 (lower is better)
Translates to: PGPEFSRDSERLQRPLSIVRHVG*QLGEES
Trigger: CGACTCTTCCCCCAGCTGCAAACCTACGTGCCGTAC...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTGACCGGGCGAGGATGTaGCGGATCTTCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSDRARM*RIFSAL
Trigger: CAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTC...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGACTAGCCTCGGCTaGCCCCGCCCTTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVWTSLG*PRPSCP
Trigger: GGGGCAGGAAGGGCGGGGCAAGCCGAGGCTAGTCCA...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS CCA 90 bp AGCCGGCTCATTGGCCCTACACGAGCTCTGGCGCCTTCAGCAAGGTaGGGACCTGAACAAGGACAGAGTCTACATCCTCCTGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SRLIGPTRALAPSAR*GPEQGQSLHPPGLS
Trigger: AGAAAGGCCAGGAGGATGTAGACTCTGTCCTTGTTCAGGTCCCCACCTTGCTGAAGGCGCCAGAGCTCGTGTAGGGCCAATGAGCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332954.8
CDS CCA 90 bp CCTGGGCCATATGAGGCAGGCAGCATTCCATTCTTCTCTGCCCGTTaGGGCTGTGCCTGCTGGCCTCTTGGGCCAGTGGGTAAATCCATA +
Preference number: 5 (lower is better)
Translates to: PGPYEAGSIPFFSAR*GCACWPLGPVGKSI
Trigger: TATGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAATGGAATGCTGCCTGCCTCATATGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp GGAGAAAACTGTCCCGTCACAGGATGCCTGAATGCTGTGGTCTGCTaGTTATGGCGAGTGCCTACTTGCTGTCCGGCACTGGGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: GENCPVTGCLNAVVC*LWRVPTCCPALGQG
Trigger: CCCTTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTCGTCTGACTGCCGCTaGAGGCCCCGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDSSDCR*RPRTDV
Trigger: CACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCATGGCCCAGTGTCCTCTaGCGCTCTCGGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPWPSVL*RSRTRA
Trigger: GGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCA...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAGCCCGTCCTCTCCCCTaGGCCCAGTGTCCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEARPLP*AQCPLA
Trigger: CGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGGC...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGCCCGTCCTCTCCCCTaGGCCCAGTGTCCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: KSHFLLRSLEVGLASACPARPLP*AQCPLA
Trigger: CGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGGC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGCCCGTCCTCTCCCCTaGGCCCAGTGTCCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPARPLP*AQCPLA
Trigger: CGCAAGAGGACACTGGGCCAAGGGGAGAGGACGGGC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCAGCGGAGCTGGTCATaGATGAAGAAGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSQRSWS*MKKTRP
Trigger: TGGCCGCGTCTTCTTCATCAATGACCAGCTCCGCTG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCATCATGTGGCCCGAGTaGACGGGCTCCCCGGTGCGC +
Preference number: 5 (lower is better)
Translates to: KSHFLLRSLEVGLASACPIMWPE*TGSPVR
Trigger: GCGCACCGGGGAGCCCGTCAACTCGGGCCACATGAT...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCGGCCCCGTGCCCTCCTaGGAGAATCCCCCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: KSHFLLRSLEVGLASACPGPVPS*ENPPAR
Trigger: TCTCGCTGGGGGATTCTCCAAGGAGGGCACGGGGCC...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGCTGGAGGACCCTGTCTaGTTCACAGAAGATGCTCAG +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWELEDPV*FTEDAQ
Trigger: CTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAG...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCCGCAGTCGGTAAGCTGCTCCTTCCTCCGGCCGGATTCCCTGCTCAGCTGGAATTAAGGGCTCGTATCTaGTCTTCCAAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PAVGKLLLPPAGFPAQLELRARI*SSKSWR
Trigger: CCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAA...TTCCAGCTGAGCAGGGAATCCGGCCGGAGGAAGGAGCAGCTTACCGACTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS TCA 90 bp GCAACGAGAGCTCCTCCAGCGATTTTCCATGTAAACTGGGAGCGCTaGCGGTGTGGGTCATGTAACCCATGGAGGGCATGGAGCGTCGGT +
Preference number: 5 (lower is better)
Translates to: ATRAPPAIFHVNWER*RCGSCNPWRAWSVG
Trigger: ACCGACGCTCCATGCCCTCCATGGGTTACATGACCCACACCGTCAGCGCTCCCAGTTTACATGGAAAATCGCTGGAGGAGCTCTCGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS GCA 90 bp ACCAGTGGTCAGCGAGACGGAGCTGGAGGGAGGACTGCTAGGTACTaGCACAGTGGAGGTTTAAAGGGTAGGAACAGGCCACATCAGAGC +
Preference number: 5 (lower is better)
Translates to: TSGQRDGAGGRTARY*HSGGLKGRNRPHQS
Trigger: GCTCTGATGTGGCCTGTTCCTACCCTTTAAACCTCCACTGTGGCAGTACCTAGCAGTCCTCCCTCCAGCTCCGTCTCGCTGACCACTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS GCA 90 bp AACTGGCTGATGGCGAAATTTCGCACACTGGCCAACTTGGCCTGGTaGCGCCTTAACCGGGTGAGAAGCAACGAGAGCTCCTCCAGCGAT +
Preference number: 5 (lower is better)
Translates to: NWLMAKFRTLANLAW*RLNRVRSNESSSSD
Trigger: ATCGCTGGAGGAGCTCTCGTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CCA 90 bp TCCATATCCCTCTTCAGTGACGATCGAGACAGCACCTGTGCAGCCTaGTTCATGGCCCTGACCCAAGCGTTCATGTCCTCCTGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: SISLFSDDRDSTCAA*FMALTQAFMSSWVS
Trigger: CGACACCCAGGAGGACATGAACGCTTGGGTCAGGGCCATGAACCAGGCTGCACAGGTGCTGTCTCGATCGTCACTGAAGAGGGATATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp GCAGGCAGCATTCCATTCTTCTCTGCCCGTTGGGGCTGTGCCTGCTaGCCTCTTGGGCCAGTGGGTAAATCCATAAACAAGGCATCCTCC +
Preference number: 5 (lower is better)
Translates to: AGSIPFFSARWGCAC*PLGPVGKSINKASS
Trigger: GGAGGATGCCTTGTTTATGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAATGGAATGCTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 90 bp AACTGTCCCGTCACAGGATGCCTGAATGCTGTGGTCTGCTGGTTATaGCGAGTGCCTACTTGCTGTCCGGCACTGGGGCAAGGGGTCAAA +
Preference number: 5 (lower is better)
Translates to: NCPVTGCLNAVVCWL*RVPTCCPALGQGVK
Trigger: TTTGACCCCTTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS CCA 90 bp TGTCATTTGGGGAGAACACTTCTTATGGGTCTCTCTCACAAAACTTaGGTCCAGGCTTGGCCTCCAGGGTGGAGGCGGTCCCAGCCGTGG +
Preference number: 5 (lower is better)
Translates to: CHLGRTLLMGLSHKT*VQAWPPGWRRSQPW
Trigger: CCACGGCTGGGACCGCCTCCACCCTGGAGGCCAAGCCTGGACCCAAGTTTTGTGAGAGAGACCCATAAGAAGTGTTCTCCCCAAATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS CCA 90 bp AGTAACTGGCTGATGGCGAAATTTCGCACACTGGCCAACTTGGCCTaGTGCCGCCTTAACCGGGTGAGAAGCAACGAGAGCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SNWLMAKFRTLANLA*CRLNRVRSNESSSS
Trigger: GCTGGAGGAGCTCTCGTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CCA 90 bp TCATCAGCCTGGCAGGTGGGAAAGGTCAGCTGGTGCTGCAGTAACTaGCTGATGGCGAAATTTCGCACACTGGCCAACTTGGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: SSAWQVGKVSWCCSN*LMAKFRTLANLAWC
Trigger: GCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTTACTGCAGCACCAGCTGACCTTTCCCACCTGCCAGGCTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCACGACTGCTGGAGCCTaGACGTGGACCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASTTAGA*TWTLRA
Trigger: GGCTCTCAGGGTCCACGTCAAGGCTCCAGCAGTCGT...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGTGGCCCAGTGTCCTCTaGCGCTCTCGGACCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVWPSVL*RSRTRA
Trigger: GGCCCTGGTCCGAGAGCGCAAGAGGACACTGGGCCA...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTGGGAGGCTGATCAGTTaGCTTGTGCTTCTAACCAAA +
Preference number: 5 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGGRLIS*LVLLTK
Trigger: TTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCC...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCCAGAACTGTCCTGCTaGTGCAGCCAGCCCCTCACC +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASPELSC*CSQPLT
Trigger: GGTGAGGGGCTGGCTGCACAAGCAGGACAGTTCTGG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp TTCTCTGAACCATGTAGGTCAATGGACAGCTCTCTCACTGGGAGGTGTGATGTGTTGCTCCGGTCCCGCTaGCCCTCCAGTGGGTCCCTC +
Preference number: 5 (lower is better)
Translates to: FSEPCRSMDSSLTGRCDVLLRSR*PSSGSL
Trigger: GAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAA...CACATCACACCTCCCAGTGAGAGAGCTGTCCATTGACCTACATGGTTCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGTGCCTGCTGGCCTCTaGGGCCAGTGGGTAAATCCA +
Preference number: 5 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEVPAGL*GQWVNP
Trigger: TGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCAC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTCTGTGTTTTTCAGGGTaGGTCCTGGGAGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSLCFSG*VLGGKA
Trigger: GGCCTTTCCTCCCAGGACCAACCCTGAAAAACACAG...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTCCACCTGGGCCAGATaGCTCTTCCTTTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSSTWAR*LFLWLC
Trigger: ACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGA...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCATGGGAAGGACAGGGATaGGCCAGGACCCTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPWEGQG*ARTLAR
Trigger: CCTCGCCAGGGTCCTGGCCAATCCCTGTCCTTCCCA...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGCTGTGGGGGCGGCTaGCTCTCAGAAGTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEGCGGG*LSEVES
Trigger: ACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCGGATCTTCTCGGCTTaGCGGTACCGCGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KSHFLLRSLEVGLASACPRIFSA*RYRACS
Trigger: GCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCGGATCTTCTCGGCTTaGCGGTACCGCGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSRIFSA*RYRACS
Trigger: GCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS TCA 90 bp GCTTGGCCTCCAGGGTGGAGGCGGTCCCAGCCGTGGATGTTTCACTaGCCATGCTGGACGGTCTTTGGTTTCTGTCTTGCTTCGACATAT +
Preference number: 5 (lower is better)
Translates to: AWPPGWRRSQPWMFH*PCWTVFGFCLASTY
Trigger: ATATGTCGAAGCAAGACAGAAACCAAAGACCGTCCAGCATGGTCAGTGAAACATCCACGGCTGGGACCGCCTCCACCCTGGAGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000528637.5
ENST00000529213.1
ENST00000531066.6
ENST00000637162.1
CDS TCA 90 bp TCCTGCTCCTGCCTCTCGAAGTTGACAATGTCATCATGGCCACGATaGGGACAATCTCTCGTATGTCCGGGTCCCACCCGGCCACATTCG +
Preference number: 5 (lower is better)
Translates to: SCSCLSKLTMSSWPR*GQSLVCPGPTRPHS
Trigger: CGAATGTGGCCGGGTGGGACCCGGACATACGAGAGATTGTCCTCATCGTGGCCATGATGACATTGTCAACTTCGAGAGGCAGGAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 90 bp TCTGGAGAAAACTGTCCCGTCACAGGATGCCTGAATGCTGTGGTCTaGTGGTTATGGCGAGTGCCTACTTGCTGTCCGGCACTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: SGENCPVTGCLNAVV*WLWRVPTCCPALGQ
Trigger: TTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS CCA 90 bp CTTTGGCTGTGTTTTTCAGGGTTGGTCCTGGGAGGAAAGGCCCGCTaGTACCCACCAGTCCCATTCTGTTCTCCTGGGCCATATGAGGCA +
Preference number: 5 (lower is better)
Translates to: LWLCFSGLVLGGKAR*YPPVPFCSPGPYEA
Trigger: TGCCTCATATGGCCCAGGAGAACAGAATGGGACTGGTGGGTACCAGCGGGCCTTTCCTCCCAGGACCAACCCTGAAAAACACAGCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS-3UTR CAA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAACGACTGCTGGAGCCTaGACGTGGACCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSETTAGA*TWTLRA
Trigger: GGCTCTCAGGGTCCACGTCAAGGCTCCAGCAGTCGT...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTTGCTGCTTTCGGCATaGAGACCCCTCCGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDLLLSA*RPLRSV
Trigger: CACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGTTGCTGCTTTCGGCATaGAGACCCCTCCGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: WKSNQSPAIMALLAAGHELLLSA*RPLRSV
Trigger: CACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAA...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCGGGAGGCTGATCAGTTaGCTTGTGCTTCTAACCAAA +
Preference number: 5 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPGRLIS*LVLLTK
Trigger: TTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCC...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGTGTGATGTGCTTGTGTTTGGGGGACTCTGAGGGGCACTCGGCTCCCTGTCCCCTTGTGGGGTGGCTTTaGGGACAAGTGAATTATGAG +
Preference number: 5 (lower is better)
Translates to: GVMCLCLGDSEGHSAPCPLVGWL*GQVNYE
Trigger: CTCATAATTCACTTGTCCCAAAAGCCACCCCACAAG...GGGACAGGGAGCCGAGTGCCCCTCAGAGTCCCCCAAACACAAGCACATCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTCTTGTGGGGTGGCTTTaGGGACAAGTGAATTATGAG +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSLVGWL*GQVNYE
Trigger: CTCATAATTCACTTGTCCCAAAAGCCACCCCACAAG...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGCAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCGAACAACCTCAGTCTaGGGAGAATGTATTCAAACG +
Preference number: 5 (lower is better)
Translates to: GRGVTPCSITLTQHLLAGRTTSV*GECIQT
Trigger: CGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCG...ACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCACCACCACGGGAACATaGGGGTTCCTCCGAATGGCC +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASTTTGT*GFLRMA
Trigger: GGCCATTCGGAGGAACCCCAATGTTCCCGTGGTGGT...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAATTCTTCTCTGCCCGTaGGGGCTGTGCCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRILLCP*GLCLLA
Trigger: GGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAAT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp CTCCCAGACAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTAAAGGCTCTTCTGTGTaGCTCCTGCAGGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LPDSTPTSLLLESTGNTSKGSSV*LLQGLL
Trigger: AAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTTT...AGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTGTCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGTACGGCACGTAGGTTaGCAGCTGGGGGAAGAGTCG +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASVRHVG*QLGEES
Trigger: CGACTCTTCCCCCAGCTGCAAACCTACGTGCCGTAC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGTAGGTTGCACATGCTaGACCGGGCGAGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEVGCTC*TGRGCC
Trigger: GCAACATCCTCGCCCGGTCAAGCATGTGCAACCTAC...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGAGGTCGGCTGTAGGTaGCACATGCTTGACCGGGCG +
Preference number: 5 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWEVGCR*HMLDRA
Trigger: CGCCCGGTCAAGCATGTGCAACCTACAGCCGACCTC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS TCA 90 bp CACGCTTCCACGATAAGATCCAACCATGACTGTCCAGCTCCGTGGTaGCTTCCTGTTGACCCAGGACCTGCATCCTCACAGGCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: HASTIRSNHDCPAPW*LPVDPGPASSQAFD
Trigger: GTCAAAGGCCTGTGAGGATGCAGGTCCTGGGTCAACAGGAAGTCACCACGGAGCTGGACAGTCATGGTTGGATCTTATCGTGGAAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533901.1
CDS GCA 90 bp TCCAAGGGAAGACTCCTGCTATCCCCTTTCTGGGCCCTTGCCCAGTaGTCCACCTGGGCCAGATTGCTCTTCCTTTGGCTGTGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: SKGRLLLSPFWALAQ*STWARLLFLWLCFS
Trigger: TGAAAAACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS-3UTR CAA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGACGACTGCTGGAGCCTaGACGTGGACCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVTTAGA*TWTLRA
Trigger: GGCTCTCAGGGTCCACGTCAAGGCTCCAGCAGTCGT...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACCTAGGGAAGGTCGCCTaGCTGCTTTCGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDLGKVA*LLSALR
Trigger: TCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAG...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCGGAGACCAGTGGCCCTaGGGGCAGGGGTGTGACCCC +
Preference number: 5 (lower is better)
Translates to: LTRSQMLQIETSPHLNPAGDQWP*GQGCDP
Trigger: GGGGTCACACCCCTGCCCCAAGGGCCACTGGTCTCC...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAAGGACAGGGATaGGCCAGGACCCTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: NYESVGLHEEGSRKVSHIWEGQG*ARTLAR
Trigger: CCTCGCCAGGGTCCTGGCCAATCCCTGTCCTTCCCA...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGGCCCCGTGCCCTCCTaGGAGAATCCCCCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELGPVPS*ENPPAR
Trigger: TCTCGCTGGGGGATTCTCCAAGGAGGGCACGGGGCC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDFRLRS*RRSRPV
Trigger: GACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAA...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp CCAGGTCCTGAATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCTTAAGGGCTCGTATCTaGTCTTCCAAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PGPEFSRDSERLQRPLSILRARI*SSKSWR
Trigger: CCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAA...GATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAATTCAGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp ATTCAGCCGAGATTCCGAACGCCTGCAAAGGCCCCTCTCCATCGCGGCTGGGAGGATTCTAGCTGGTCTTaGTTCTCTTTAAGGGCTCGT +
Preference number: 5 (lower is better)
Translates to: IQPRFRTPAKAPLHRGWEDSSWS*FSLRAR
Trigger: ACGAGCCCTTAAAGAGAACAAAGACCAGCTAGAATC...CTCCCAGCCGCGATGGAGAGGGGCCTTTGCAGGCGTTCGGAATCTCGGCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGGGGTGTGACCCCGTGCTCCATCACCCTCACACAGCATCTGCTGGCAGGTCTGATTCTAGCTGGTCTTaGTTCTCTTTAAGGGCTCGT +
Preference number: 5 (lower is better)
Translates to: QGCDPVLHHPHTASAGRSDSSWS*FSLRAR
Trigger: ACGAGCCCTTAAAGAGAACAAAGACCAGCTAGAATC...AGACCTGCCAGCAGATGCTGTGTGAGGGTGATGGAGCACGGGGTCACACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGGTACGGCACGTAGGTTaGCAGCTGGGGGAAGAGTCG +
Preference number: 5 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWVRHVG*QLGEES
Trigger: CGACTCTTCCCCCAGCTGCAAACCTACGTGCCGTAC...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGGACCGGGCGAGGATGTaGCGGATCTTCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVDRARM*RIFSAL
Trigger: CAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTC...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGTAGGTTGCACATGCTaGACCGGGCGAGGATGTTGC +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASVGCTC*TGRGCC
Trigger: GCAACATCCTCGCCCGGTCAAGCATGTGCAACCTAC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGGGCAAGGCACAGACTaGGGCTCCACGTGTGATCCT +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSGQGTD*GSTCDP
Trigger: AGGATCACACGTGGAGCCCAAGTCTGTGCCTTGCCC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS TCA 90 bp AATTTCGCACACTGGCCAACTTGGCCTGGTGCCGCCTTAACCGGGTaGGAAGCAACGAGAGCTCCTCCAGCGATTTTCCATGTAAACTGG +
Preference number: 5 (lower is better)
Translates to: NFAHWPTWPGAALTG*EATRAPPAIFHVNW
Trigger: CCAGTTTACATGGAAAATCGCTGGAGGAGCTCTCGTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS-3UTR CAA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGCAGGTTGGCTCAGGCTaGTGGGGTGGCTTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVQVGSG*WGGFWD
Trigger: GTCCCAAAAGCCACCCCACAAGCCTGAGCCAACCTG...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCATCATGTGGCCCGAGTaGACGGGCTCCCCGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSIMWPE*TGSPVR
Trigger: GCGCACCGGGGAGCCCGTCAACTCGGGCCACATGAT...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCTACGGAGACCTGGCCTaGCTCCGGTCCCGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LTRSQMLQIETSPHLNPAYGDLA*LRSRLP
Trigger: GGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTA...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTCTGTGTTTTTCAGGGTaGGTCCTGGGAGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTALCFSG*VLGGKA
Trigger: GGCCTTTCCTCCCAGGACCAACCCTGAAAAACACAG...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATGTCCAAGTCATAGTCTaGAGGCTCCAGGTCCAACTC +
Preference number: 5 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDVQVIV*RLQVQL
Trigger: GAGTTGGACCTGGAGCCTCAAGACTATGACTTGGAC...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCCGTAGCGCTCAGGGATaGACACCTTCTCTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASRSAQG*TPSLVW
Trigger: CCAAACCAGAGAAGGTGTCAATCCCTGAGCGCTACG...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTTGGGCCCCAGTCCTCTaGAACACACTGTTGCCCCTA +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSWAPVL*NTLLPL
Trigger: TAGGGGCAACAGTGTGTTCAAGAGGACTGGGGCCCA...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCTCTGACAAGAGCCTTTaGCTGGAGGAAGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KSHFLLRSLEVGLASACPSDKSL*LEEAWG
Trigger: CCCCCAGGCTTCCTCCAGCAAAAGGCTCTTGTCAGA...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TGGAAGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGCAGTCACTGCCTGGGTaGGAAGGTGTTAGACAAAGG +
Preference number: 5 (lower is better)
Translates to: WKSNQSPAIMALLAAGHEQSLPG*EGVRQR
Trigger: CCTTTGTCTAACACCTTCCAACCCAGGCAGTGACTG...CTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636090.1
CDS TCA 90 bp TCTGGGAACGGTACTGCTCTCCCTCCTGCTCCTGCCTCTCGAAGTTaGCAATGTCATCATGGCCACGATGAGGACAATCTCTCGTATGTC +
Preference number: 5 (lower is better)
Translates to: SGNGTALPPAPASRS*QCHHGHDEDNLSYV
Trigger: GACATACGAGAGATTGTCCTCATCGTGGCCATGATGACATTGTCAACTTCGAGAGGCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS TCA 90 bp CAGTGTCGCTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCATCTTTAGATCCAGGTACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QCRSQRSSQASDFDP*EGPGLSSLDPGTPG
Trigger: ACCTGGAGTACCTGGATCTAAAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS TCA 90 bp AAGGTCCCGGCCTGTCATGCTTCTCCTGGGCCGACAGCCCCGTGCTaGCTTCTTCAGCACTTTGTAAAGCACGTTGATCAAAGGTTCATT +
Preference number: 5 (lower is better)
Translates to: KVPACHASPGPTAPC*LLQHFVKHVDQRFI
Trigger: AATGAACCTTTGATCAACGTGCTTTACAAAGTGCTGAAGAAGTCAGCACGGGGCTGTCGGCCCAGGAGAAGCATGACAGGCCGGGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS GCA 90 bp ATGGCCTCCCTTTGGGCTCCACGTTCGGATAGTGTCTTCCCCAGCTaGACCACCTTATTAAATCTTAGGTTCAGGTCAGACAGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: MASLWAPRSDSVFPS*TTLLNLRFRSDREG
Trigger: TCCCTCCCTGTCTGACCTGAACCTAAGATTTAATAAGGTGGTGCAGCTGGGGAAGACACTATCCGAACGTGGAGCCCAAAGGGAGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS GCA 90 bp GGAAAGAGAAGTGCAAGCATGTTTGTGCTGGGGTGGATGGGTCCCTaGTTCTCCCTCATCACACATTCTTGCAGGAGTACCAAGAGCACC +
Preference number: 5 (lower is better)
Translates to: GKRSASMFVLGWMGP*FSLITHSCRSTKST
Trigger: GGTGCTCTTGGTACTCCTGCAAGAATGTGTGATGAGGGAGAAGCAGGGACCCATCCACCCCAGCACAAACATGCTTGCACTTCTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531776.1
ENST00000533251.1
CDS CCA 90 bp ACATTGGGGTTCCTCCGAATGGCCTGGTCTCTCTTCCCAAAGCTGTaGACTTTACTGCTGGACTTTATGATCTTGGGTCCAGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TLGFLRMAWSLFPKL*TLLLDFMILGPGLA
Trigger: GGCCAAGCCTGGACCCAAGATCATAAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGAGAGACCAGGCCATTCGGAGGAACCCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000529213.1
ENST00000531066.6
ENST00000637162.1
CDS-3UTR CAA 90 bp GGACAAGTGAATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGTTGCTGCTTTCGGCATaGAGACCCCTCCGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: GQVNYESVGLHEEGSRKVLLLSA*RPLRSV
Trigger: CACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAA...CACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATTCACTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCTAGGGAAGGTCGCCTaGCTGCTTTCGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSLGKVA*LLSALR
Trigger: TCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAG...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCGCGTCAGGCAGCAGGTaGGCTCAGGCTTGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSASGSR*AQACGV
Trigger: CACCCCACAAGCCTGAGCCAACCTGCTGCCTGACGC...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATCATGCTGGACGGTCTTaGGTTTCTGTCTTGCTTCGA +
Preference number: 5 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDHAGRS*VSVLLR
Trigger: TCGAAGCAAGACAGAAACCAAAGACCGTCCAGCATG...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp GTCGTGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACTCCTGCCTCTCGAAGTaGACAATGTCATCATGGCCA +
Preference number: 5 (lower is better)
Translates to: VVDKQPRGVFSEPCRSMDSCLSK*TMSSWP
Trigger: TGGCCATGATGACATTGTCAACTTCGAGAGGCAGGA...GTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTCATACTTGTAGTCACTaGGCAGGTTTCGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTAHTCSH*AGFGEV
Trigger: CACCTCCCCGAAACCTGCCAAGTGACTACAAGTATG...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGATTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRFRLRS*RRSRPV
Trigger: GACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAA...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCGGCTGTGGGGGCGGCTaGCTCTCAGAAGTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFGCGGG*LSEVES
Trigger: ACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCC...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCGTAGCGCTCAGGGATaGACACCTTCTCTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWRSAQG*TPSLVW
Trigger: CCAAACCAGAGAAGGTGTCAATCCCTGAGCGCTACG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp AGTCAAATCAAAGTCCTGCCATTATGGCCCTGCTGGCGGCAGGCCATGAGGGATAGAAAGGTCATCTCCTaGGAGGAAGCTGGTTCCACT +
Preference number: 5 (lower is better)
Translates to: SQIKVLPLWPCWRQAMRDRKVIS*EEAGST
Trigger: AGTGGAACCAGCTTCCTCCAAGGAGATGACCTTTCT...ATCCCTCATGGCCTGCCGCCAGCAGGGCCATAATGGCAGGACTTTGATTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCTGGAAGGGGTTTCCTaGGGGGCAGAAAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVLEGVS*GAERSS
Trigger: AGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS GCA 90 bp TTCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATGGCGAGTGCCTACTTGCTGTCCGGC +
Preference number: 5 (lower is better)
Translates to: FTIFWRKLSRHRMPE*CGLLVMASAYLLSG
Trigger: GCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS GCA 90 bp TTCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATGGCCTCCCTTTGGGCTCCACGTTCG +
Preference number: 5 (lower is better)
Translates to: FTIFWRKLSRHRMPE*CGLLVMASLWAPRS
Trigger: CGAACGTGGAGCCCAAAGGGAGGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528376.5
ENST00000528637.5
CDS-3UTR CAA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCATCGTCTGACTGCCGCTaGAGGCCCCGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: SWENVFKRAISEVPVYCPSSDCR*RPRTDV
Trigger: CACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGA...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCACGACTGCTGGAGCCTaGACGTGGACCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSTTAGA*TWTLRA
Trigger: GGCTCTCAGGGTCCACGTCAAGGCTCCAGCAGTCGT...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATGGCTCCTGGGCCTGTTaGATCCTCACTCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHGSWAC*ILTPAL
Trigger: CAGAGCTGGAGTGAGGATCAAACAGGCCCAGGAGCC...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGGAGACCAGTGGCCCTaGGGGCAGGGGTGTGACCCC +
Preference number: 5 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRGDQWP*GQGCDP
Trigger: GGGGTCACACCCCTGCCCCAAGGGCCACTGGTCTCC...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp AGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCACCATCAGGTTGGCTCAGGCTaGTGGGGTGGCTTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: RSGRLISLLVLLTKSCHHQVGSG*WGGFWD
Trigger: GTCCCAAAAGCCACCCCACAAGCCTGAGCCAACCTG...ATGGTGACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCATTCTTCTCTGCCCGTaGGGGCTGTGCCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PYTLTNAPNRDKSSFKPSILLCP*GLCLLA
Trigger: GGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAAT...GCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCATACTTGTAGTCACTaGGCAGGTTTCGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVHTCSH*AGFGEV
Trigger: CACCTCCCCGAAACCTGCCAAGTGACTACAAGTATG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCFRLRS*RRSRPV
Trigger: GACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAA...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGCTGGAGGACCCTGTCTaGTTCACAGAAGATGCTCAG +
Preference number: 5 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWLEDPV*FTEDAQ
Trigger: CTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAG...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGAAAAGGCTCTTCTGTGTaGCTCCTGCAGGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRKGSSV*LLQGLL
Trigger: AAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTTT...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTAAAGGCTCTTCTGTGTaGCTCCTGCAGGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSKGSSV*LLQGLL
Trigger: AAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTTT...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAAAAAGGCTCTTCTGTGTaGCTCCTGCAGGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSEKGSSV*LLQGLL
Trigger: AAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTTT...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGGCTGTGGGGGCGGCTaGCTCTCAGAAGTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELGCGGG*LSEVES
Trigger: ACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GGTTCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTCCAAGTCATAGTCTaGAGGCTCCAGGTCCAACTC +
Preference number: 5 (lower is better)
Translates to: GSHHGLVRGKGFLGRCHPVQVIV*RLQVQL
Trigger: GAGTTGGACCTGGAGCCTCAAGACTATGACTTGGAC...TGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGGACACCTTCTCTGGTTaGGACAGCTCTCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVDTFSG*DSSLLM
Trigger: CATCAGCAGAGAGCTGTCCAAACCAGAGAAGGTGTC...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCACGCCAACCAGCCTCTaGCTGGAGTCTACTGGGAAC +
Preference number: 5 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFTPTSL*LESTGN
Trigger: GTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGT...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS GCA 90 bp TTCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATGGTCGATGAAGTAGCTGGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: FTIFWRKLSRHRMPE*CGLLVMVDEVAGAL
Trigger: GAGGGCGCCAGCTACTTCATCGACCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS CCA 90 bp ACATTGGGGTTCCTCCGAATGGCCTGGTCTCTCTTCCCAAAGCTGTaGACTTTACTGCTGGACTTTATGATCTGTTCTGCTGGACAAGGG +
Preference number: 5 (lower is better)
Translates to: TLGFLRMAWSLFPKL*TLLLDFMICSAGQG
Trigger: CCCTTGTCCAGCAGAACAGATCATAAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGAGAGACCAGGCCATTCGGAGGAACCCCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS CCA 90 bp CTTAGTGAGGAAAGAGAAGTGCAAGCATGTTTGTGCTGGGGTGGATaGGTCCCTGCTTCTCCCTCATCACACATTCTTGCAGGAGTACCA +
Preference number: 5 (lower is better)
Translates to: LSEEREVQACLCWGG*VPASPSSHILAGVP
Trigger: TGGTACTCCTGCAAGAATGTGTGATGAGGGAGAAGCAGGGACCCATCCACCCCAGCACAAACATGCTTGCACTTCTCTTTCCTCACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531776.1
ENST00000533251.1
CDS-3UTR CAA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTCCTGCCTCTCGAAGTaGACAATGTCATCATGGCCA +
Preference number: 5 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWSCLSK*TMSSWP
Trigger: TGGCCATGATGACATTGTCAACTTCGAGAGGCAGGA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp AATTATGAGTCAGTAGGCCTGCATGAAGAGGGCAGCAGAAAGGTGAGTCACATCTCCACCTGGGCCAGATaGCTCTTCCTTTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: NYESVGLHEEGSRKVSHISTWAR*LFLWLC
Trigger: ACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGA...GATGTGACTCACCTTTCTGCTGCCCTCTTCATGCAGGCCTACTGACTCATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATGGGAAGGACAGGGATaGGCCAGGACCCTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQWEGQG*ARTLAR
Trigger: CCTCGCCAGGGTCCTGGCCAATCCCTGTCCTTCCCA...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTCTGGAGGACCCTGTCTaGTTCACAGAAGATGCTCAG +
Preference number: 5 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCLEDPV*FTEDAQ
Trigger: CTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAG...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp AGAGGGCAGCAGAAAGGTGAGTCACATCTGGGAACACTCAACAGGCTATGGAGATTAAGGGCTCGTATCTaGTCTTCCAAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RGQQKGESHLGTLNRLWRLRARI*SSKSWR
Trigger: CCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAA...TCTCCATAGCCTGTTGAGTGTTCCCAGATGTGACTCACCTTTCTGCTGCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAATTAAGGGCTCGTATCTaGTCTTCCAAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSELRARI*SSKSWR
Trigger: CCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAA...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGGCTGTGGGGGCGGCTaGCTCTCAGAAGTTGAGAGT +
Preference number: 5 (lower is better)
Translates to: SWENVFKRAISEVPVYCPGCGGG*LSEVES
Trigger: ACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS TCA 90 bp CCTGGTCTCTCTTCCCAAAGCTGTGGACTTTACTGCTGGACTTTATaGTCTGTTCTGCTGGACAAGGGACATATCCCTCTTGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PGLSSQSCGLYCWTL*SVLLDKGHIPLGLS
Trigger: ACTGAGGCCAAGAGGGATATGTCCCTTGTCCAGCAGAACAGATCATAAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGAGAGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS-3UTR CAA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACTAGGGAAGGTCGCCTaGCTGCTTTCGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELLGKVA*LLSALR
Trigger: TCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAACCAGAACTGTCCTGCTaGTGCAGCCAGCCCCTCACC +
Preference number: 5 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQPELSC*CSQPLT
Trigger: GGTGAGGGGCTGGCTGCACAAGCAGGACAGTTCTGG...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp CCTGTCACCCAGAAGTACCTGAATCTGTACGTGCAGCTGCAAAGTCCTGCATCCGATTCTAGCTGGTCTTaGTTCTCTTTAAGGGCTCGT +
Preference number: 5 (lower is better)
Translates to: PVTQKYLNLYVQLQSPASDSSWS*FSLRAR
Trigger: ACGAGCCCTTAAAGAGAACAAAGACCAGCTAGAATC...GGATGCAGGACTTTGCAGCTGCACGTACAGATTCAGGTACTTCTGGGTGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGCTTCATCTTCAACTTaGGGCTTCGCCTTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSASSST*GFALVG
Trigger: ACCAACTAAGGCGAAGCCCAAAGTTGAAGATGAAGC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS TCA 90 bp CTGTTCTGCTGGACAAGGGACATATCCCTCTTGGCCTCAGTTTCCTaGTCTGTCATTTGGGGAGAACACTTCTTATGGGTCTCTCTCACA +
Preference number: 5 (lower is better)
Translates to: LFCWTRDISLLASVS*SVIWGEHFLWVSLT
Trigger: TGTGAGAGAGACCCATAAGAAGTGTTCTCCCCAAATGACAGATCAGGAAACTGAGGCCAAGAGGGATATGTCCCTTGTCCAGCAGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS TCA 90 bp TGGATGGTGTGGAAGTCCTTGGCAGTGGCAGGTAGGGTCATAGTATaGGAGGGACAAAAACTTGGGCCATACTTCGCTATTTCTATGCCT +
Preference number: 5 (lower is better)
Translates to: WMVWKSLAVAGRVIV*EGQKLGPYFAISMP
Trigger: AGGCATAGAAATAGCGAAGTATGGCCCAAGTTTTTGTCCCTCTCATACTATGACCCTACCTGCCACTGCCAAGGACTTCCACACCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531079.1
CDS GCA 90 bp AGAATGAATTCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATaGCTGAATGCTGTGGTCTGCTGGTTATGGCCTCCCTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RMNSLFSGENCPVTG*LNAVVCWLWPPFGL
Trigger: GAGCCCAAAGGGAGGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGAATTCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528376.5
ENST00000528637.5
CDS-3UTR CAA 90 bp CTCTCCTCTCTGAACCCTGTATTCCCAGGTCCTGAATTCAGCCGAGATTCCGAACGAACAACCTCAGTCTaGGGAGAATGTATTCAAACG +
Preference number: 5 (lower is better)
Translates to: LSSLNPVFPGPEFSRDSERTTSV*GECIQT
Trigger: CGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCG...TTCGGAATCTCGGCTGAATTCAGGACCTGGGAATACAGGGTTCAGAGAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GACTCTATAAGGTATCCTGGGGAAGAACCACGCCAATCCATTATTATTAAGCAAACCACCACGGGAACATaGGGGTTCCTCCGAATGGCC +
Preference number: 5 (lower is better)
Translates to: DSIRYPGEEPRQSIIIKQTTTGT*GFLRMA
Trigger: GGCCATTCGGAGGAACCCCAATGTTCCCGTGGTGGT...TTGCTTAATAATAATGGATTGGCGTGGTTCTTCCCCAGGATACCTTATAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTGCCTTAAAGGAATATTaGCGGCTTATGCGATCCTCA +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSALKEY*RLMRSS
Trigger: TGAGGATCGCATAAGCCGCAAATATTCCTTTAAGGC...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGTGCCTGCTGGCCTCTaGGGCCAGTGGGTAAATCCA +
Preference number: 5 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSVPAGL*GQWVNP
Trigger: TGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCAC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTACATACTTGTAGTCACTaGGCAGGTTTCGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELHTCSH*AGFGEV
Trigger: CACCTCCCCGAAACCTGCCAAGTGACTACAAGTATG...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCGCTTGCTCTCAGAAGTaGAGAGTGAAGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: LTRSQMLQIETSPHLNPAACSQK*RVKAQA
Trigger: CGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGC...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGTACGGCACGTAGGTTaGCAGCTGGGGGAAGAGTCG +
Preference number: 5 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSVRHVG*QLGEES
Trigger: CGACTCTTCCCCCAGCTGCAAACCTACGTGCCGTAC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCCCTGCCACTCAGCCCTaGAGGGGAACATTAGAAAAT +
Preference number: 5 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFPATQP*RGTLEN
Trigger: ATTTTCTAATGTTCCCCTCAAGGGCTGAGTGGCAGG...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTCACTTTCTTTCTCCTGAGGTCATaGGAAGTTGGACTAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PTSLLLESTGNTSLNLTFFLLRS*EVGLAS
Trigger: CGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAA...GAAAGTGAGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS GCA 90 bp AGAATGAATTCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATaGCTGAATGCTGTGGTCTGCTGGTTATGGCGAGTGCCTACTTGC +
Preference number: 5 (lower is better)
Translates to: RMNSLFSGENCPVTG*LNAVVCWLWRVPTC
Trigger: GCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGAATTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS-3UTR CAA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTTGCTGCTTTCGGCATaGAGACCCCTCCGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSLLLSA*RPLRSV
Trigger: CACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAA...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp TGGACAAACAGCCCCGTGGGGTGTTCTCTGAACCATGTAGGTCAATGGACAGCTACATGTTTATTGGCGTaGATGCAGAGACTTACACAA +
Preference number: 5 (lower is better)
Translates to: WTNSPVGCSLNHVGQWTATCLLA*MQRLTQ
Trigger: TTGTGTAAGTCTCTGCATCAACGCCAATAAACATGT...AGCTGTCCATTGACCTACATGGTTCAGAGAACACCCCACGGGGCTGTTTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTGTGCCTGCTGGCCTCTaGGGCCAGTGGGTAAATCCA +
Preference number: 5 (lower is better)
Translates to: IKTEQPQSWENVFKRAISVPAGL*GQWVNP
Trigger: TGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCAC...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAAAAGGCTCTTCTGTGTaGCTCCTGCAGGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: SWENVFKRAISEVPVYCPKGSSV*LLQGLL
Trigger: AAGCAGACCCTGCAGGAGCAACACAGAAGAGCCTTT...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS GCA 90 bp CCAAGCCTGCTTCATAGCTTTCTAGGTAAGCATAGACAAGGAAAATaGCCACGATCCAGGGAGAAATTTCAGAGTAGCTTTCAGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PSLLHSFLGKHRQGK*PRSREKFQSSFQQS
Trigger: GGACTGCTGAAAGCTACTCTGAAATTTCTCCCTGGATCGTGGGCATTTTCCTTGTCTATGCTTACCTAGAAAGCTATGAAGCAGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525177.1
CDS CCA 90 bp TGGTCTTTGTTCTCTTTAAGGGCTCGTATCTTGTCTTCCAAGTCCTaGAGGACCCTGTCTTGTTCACAGAAGATGCTCAGTTTGACGTCA +
Preference number: 5 (lower is better)
Translates to: WSLFSLRARILSSKS*RTLSCSQKMLSLTS
Trigger: TGACGTCAAACTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAAAGAGAACAAAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525581.2
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531079.1
ENST00000636113.1
ENST00000637162.1
CDS-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTTCGTCTGACTGCCGCTaGAGGCCCCGCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSSSDCR*RPRTDV
Trigger: CACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGA...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTACGACTGCTGGAGCCTaGACGTGGACCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSTTAGA*TWTLRA
Trigger: GGCTCTCAGGGTCCACGTCAAGGCTCCAGCAGTCGT...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTTTGCTGCTTTCGGCATaGAGACCCCTCCGGAGTGTG +
Preference number: 5 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRLLLSA*RPLRSV
Trigger: CACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAA...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQFRLRS*RRSRPV
Trigger: GACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAA...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp TCCCATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGCCAGTGTGGAGTTTATaGCTACGATACAATGAAAGT +
Preference number: 5 (lower is better)
Translates to: SHHGLVRGKGFLGRCHPVPVWSL*LRYNES
Trigger: ACTTTCATTGTATCGTAGCAATAAACTCCACACTGG...CACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp AAATCTCACTTTCTCCTGAGGTCATTGGAAGTTGGACTAGCCTCGGCTTGCCCCCCAGTGTGGAGTTTATaGCTACGATACAATGAAAGT +
Preference number: 5 (lower is better)
Translates to: KSHFLLRSLEVGLASACPPVWSL*LRYNES
Trigger: ACTTTCATTGTATCGTAGCAATAAACTCCACACTGG...GGGGCAAGCCGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAAGTGAGATTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS CCA 90 bp CTGGACTTTATGATCTGTTCTGCTGGACAAGGGACATATCCCTCTTaGCCTCAGTTTCCTGATCTGTCATTTGGGGAGAACACTTCTTAT +
Preference number: 5 (lower is better)
Translates to: LDFMICSAGQGTYPS*PQFPDLSFGENTSY
Trigger: ATAAGAAGTGTTCTCCCCAAATGACAGATCAGGAAACTGAGGCCAAGAGGGATATGTCCCTTGTCCAGCAGAACAGATCATAAAGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS-3UTR CAA 90 bp ACTACAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGGAGGTGTGATGTGCTaGTGTTTGGGGGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: TTGIKTEQPQSWENVFKRGGVMC*CLGDSE
Trigger: CTCAGAGTCCCCCAAACACAAGCACATCACACCTCC...ACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCAGGGAGGCTGATCAGTTaGCTTGTGCTTCTAACCAAA +
Preference number: 5 (lower is better)
Translates to: SWENVFKRAISEVPVYCPGRLIS*LVLLTK
Trigger: TTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCC...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp CTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCTCATTTAAACCCAGCCCTTGTGGGGTGGCTTTaGGGACAAGTGAATTATGAG +
Preference number: 5 (lower is better)
Translates to: LTRSQMLQIETSPHLNPALVGWL*GQVNYE
Trigger: CTCATAATTCACTTGTCCCAAAAGCCACCCCACAAG...GGCTGGGTTTAAATGAGGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GCTGGCAGGTCTGGGAGGCTGATCAGTTTGCTTGTGCTTCTAACCAAATCATGTACATGTTTATTGGCGTaGATGCAGAGACTTACACAA +
Preference number: 5 (lower is better)
Translates to: AGRSGRLISLLVLLTKSCTCLLA*MQRLTQ
Trigger: TTGTGTAAGTCTCTGCATCAACGCCAATAAACATGT...ACATGATTTGGTTAGAAGCACAAGCAAACTGATCAGCCTCCCAGACCTGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000530489.5
CDS-3UTR CAA 90 bp CATCATGGCCTGGTTAGAGGGAAGGGATTTCTAGGTAGATGTCACCCAGTGTGGTGGATTCGGCTCTTCTaGAAGAATGAATTCACTATT +
Preference number: 5 (lower is better)
Translates to: HHGLVRGKGFLGRCHPVWWIRLF*KNEFTI
Trigger: AATAGTGAATTCATTCTTCAAGAAGAGCCGAATCCA...CCACACTGGGTGACATCTACCTAGAAATCCCTTCCCTCTAACCAGGCCATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS-3UTR CAA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTCTGGACTTTATGATCTaGGGTCCAGGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: IKTEQPQSWENVFKRAISLDFMI*GPGLAS
Trigger: GGAGGCCAAGCCTGGACCCAAGATCATAAAGTCCAG...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGCCTTAAAGGAATATTaGCGGCTTATGCGATCCTCA +
Preference number: 5 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELALKEY*RLMRSS
Trigger: TGAGGATCGCATAAGCCGCAAATATTCCTTTAAGGC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GCAGCTTTTAAAGATATGAATGTCCTGGGCCTTACCCCTTTGGTGTCTGAGCTAGATTCTAGCTGGTCTTaGTTCTCTTTAAGGGCTCGT +
Preference number: 5 (lower is better)
Translates to: AAFKDMNVLGLTPLVSELDSSWS*FSLRAR
Trigger: ACGAGCCCTTAAAGAGAACAAAGACCAGCTAGAATC...TAGCTCAGACACCAAAGGGGTAAGGCCCAGGACATTCATATCTTTAAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGGCTTGCTCTCAGAAGTaGAGAGTGAAGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLACSQK*RVKAQA
Trigger: CGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGC...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp CAGCACGCCAACCAGCCTCTTGCTGGAGTCTACTGGGAACACCTCTTTAAATCTATATCAAAAGTGCCTTaGCCATTCATATGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: QHANQPLAGVYWEHLFKSISKVP*PFICRE
Trigger: CTCTCTACATATGAATGGCAAAGGCACTTTTGATAT...AGATTTAAAGAGGTGTTCCCAGTAGACTCCAGCAAGAGGCTGGTTGGCGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGGGCAAGGCACAGACTaGGGCTCCACGTGTGATCCT +
Preference number: 5 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSGQGTD*GSTCDP
Trigger: AGGATCACACGTGGAGCCCAAGTCTGTGCCTTGCCC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS GCA 90 bp AGAGTTTCCATAACTCGAGGTTTCACATGTGAATTATTTACATCGTaGAGCTTTGGGAACAAGGAACCACAGCAGACCAACACATCAGGG +
Preference number: 5 (lower is better)
Translates to: RVSITRGFTCELFTS*SFGNKEPQQTNTSG
Trigger: CCCTGATGTGTTGGTCTGCTGTGGTTCCTTGTTCCCAAAGCTGCACGATGTAAATAATTCACATGTGAAACCTCGAGTTATGGAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525049.5
CDS GCA 90 bp CACGATCCAGGGAGAAATTTCAGAGTAGCTTTCAGCAGTCCAGCTTaGCTACCTAATTTAAAAACAGACTGCCGTAAACACTGTGCCATT +
Preference number: 5 (lower is better)
Translates to: HDPGRNFRVAFSSPA*LPNLKTDCRKHCAI
Trigger: AATGGCACAGTGTTTACGGCAGTCTGTTTTTAAATTAGGTAGGCAAGCTGGACTGCTGAAAGCTACTCTGAAATTTCTCCCTGGATCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525177.1
CDS CCA 90 bp CATATGTGGATTCGGCTCTTCTTGAAGAATGAATTCACTATTTTCTaGAGAAAACTGTCCCGTCACAGGATGCCTGAATGCTGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: HMWIRLFLKNEFTIF*RKLSRHRMPECCGL
Trigger: CAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGAATTCATTCTTCAAGAAGAGCCGAATCCACATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000528637.5
ENST00000529213.1
ENST00000531066.6
CDS TCA 90 bp ACATCTTCAATTCTCCATAGATCTTTCTGTATCTGCGATTTCTCCTaGGGAAGACGAAGTGGTGGGTTTGCCTTCTTAGCTCCTTACAAG +
Preference number: 5 (lower is better)
Translates to: TSSILHRSFCICDFS*GRRSGGFAFLAPYK
Trigger: CTTGTAAGGAGCTAAGAAGGCAAACCCACCACTTCGTCTTCCTCAGGAGAAATCGCAGATACAGAAAGATCTATGGAGAATTGAAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525177.1
CDS-3UTR CAA 90 bp ATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAATCTCTCATGCTGGACGGTCTTaGGTTTCTGTCTTGCTTCGA +
Preference number: 5 (lower is better)
Translates to: IKTEQPQSWENVFKRAISHAGRS*VSVLLR
Trigger: TCGAAGCAAGACAGAAACCAAAGACCGTCCAGCATG...AGAGATTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGCTTGCTCTCAGAAGTaGAGAGTGAAGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSACSQK*RVKAQA
Trigger: CGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp AGAAAACACTCATTTCCTTACACGCTCACAAATGCTCCAAATAGAGACAAGTCCGCTTCATCTTCAACTTaGGGCTTCGCCTTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: RKHSFPYTLTNAPNRDKSASSST*GFALVG
Trigger: ACCAACTAAGGCGAAGCCCAAAGTTGAAGATGAAGC...GGACTTGTCTCTATTTGGAGCATTTGTGAGCGTGTAAGGAAATGAGTGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTCTGGAAGGGGTTTCCTaGGGGGCAGAAAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSLEGVS*GAERSS
Trigger: AGATGACCTTTCTGCCCCCAAGGAAACCCCTTCCAG...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGCCTGCCACTCAGCCCTaGAGGGGAACATTAGAAAAT +
Preference number: 5 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLPATQP*RGTLEN
Trigger: ATTTTCTAATGTTCCCCTCAAGGGCTGAGTGGCAGG...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS GCA 90 bp GTAGCTTTCAGCAGTCCAGCTTGCCTACCTAATTTAAAAACAGACTaGCGTAAACACTGTGCCATTCCGCTAAAATACTGTATGACATAC +
Preference number: 5 (lower is better)
Translates to: VAFSSPACLPNLKTD*RKHCAIPLKYCMTY
Trigger: GTATGTCATACAGTATTTTAGCGGAATGGCACAGTGTTTACGGCAGTCTGTTTTTAAATTAGGTAGGCAAGCTGGACTGCTGAAAGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525177.1
CDS-3UTR CAA 90 bp CAGGAATTAAAACCGAACAACCTCAGTCTTGGGAGAATGTATTCAAACGTGCAACGAACAACCTCAGTCTaGGGAGAATGTATTCAAACG +
Preference number: 5 (lower is better)
Translates to: QELKPNNLSLGRMYSNVQRTTSV*GECIQT
Trigger: CGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCG...TTGCACGTTTGAATACATTCTCCCAAGACTGAGGTTGTTCGGTTTTAATTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000636113.1
CDS-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTGACACCTTCTCTGGTTaGGACAGCTCTCTGCTGATG +
Preference number: 5 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSDTFSG*DSSLLM
Trigger: CATCAGCAGAGAGCTGTCCAAACCAGAGAAGGTGTC...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS TCA 90 bp ACAGTTATGAACACCAAGAGTTTCCATAACTCGAGGTTTCACATGTaGATTATTTACATCGTGCAGCTTTGGGAACAAGGAACCACAGCA +
Preference number: 5 (lower is better)
Translates to: TVMNTKSFHNSRFHM*IIYIVQLWEQGTTA
Trigger: TGCTGTGGTTCCTTGTTCCCAAAGCTGCACGATGTAAATAATTCACATGTGAAACCTCGAGTTATGGAAACTCTTGGTGTTCATAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525049.5
CDS-3UTR CAA 90 bp TCTTGGGAGAATGTATTCAAACGTGCAATCTCTGAAGTCCCTGTCTACTGTCCATGGATTCGGCTCTTCTaGAAGAATGAATTCACTATT +
Preference number: 5 (lower is better)
Translates to: SWENVFKRAISEVPVYCPWIRLF*KNEFTI
Trigger: AATAGTGAATTCATTCTTCAAGAAGAGCCGAATCCA...TGGACAGTAGACAGGGACTTCAGAGATTGCACGTTTGAATACATTCTCCCAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355661.7
CDS-3UTR CAA 90 bp GTATTTTACAGTGTATATCAAAAGTGCCTTTGCCATTCATATGTAGAGAGGAGTTTTCTCCTGAGGTCATaGGAAGTTGGACTAGCCTCG +
Preference number: 5 (lower is better)
Translates to: VFYSVYQKCLCHSYVERSFLLRS*EVGLAS
Trigger: CGAGGCTAGTCCAACTTCCAATGACCTCAGGAGAAA...ACTCCTCTCTACATATGAATGGCAAAGGCACTTTTGATATACACTGTAAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS-3UTR CAA 90 bp AGAAATTTTCATTTAAAGTGTGGCTCCACCCAATGGAGGTTTTCGTTGTTGTTGATATCAAAAGTGCCTTaGCCATTCATATGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: RNFHLKCGSTQWRFSLLLISKVP*PFICRE
Trigger: CTCTCTACATATGAATGGCAAAGGCACTTTTGATAT...CAACAACAACGAAAACCTCCATTGGGTGGAGCCACACTTTAAATGAAAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000531066.6
ENST00000636090.1
CDS TCA 72 bp CGCGGGGCAGGTCTGAGCGGATCATGTGGCCCGAGTTaGCGGGCTCCCCGGTGCGCGGATGCAGCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: RGAGLSGSCGPS*RAPRCADAARS
Trigger: CGACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAACTCGGGCCACATGATCCGCTCAGACCTGCCCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS CAA 72 bp CCGCGGGGCAGGTCTGAGCGGATCATGTGGCCCGAGTaGACGGGCTCCCCGGTGCGCGGATGCAGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: PRGRSERIMWPE*TGSPVRGCSQV
Trigger: GACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAACTCGGGCCACATGATCCGCTCAGACCTGCCCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS CAA 72 bp GCATCCTCCTCGGCTGGCGAGTACGGAGACCTGGCCTaGCTCCGGTCCCGCTTGCCCTCCAGTGGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: ASSSAGEYGDLA*LRSRLPSSGSL
Trigger: GAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCCAGCCGAGGAGGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CAA 90 bp TCCTCGGCTGGCGAGTACGGAGACCTGGCCTTGCTCCGGTCCCGCTaGCCCTCCAGTGGGTCCCTCTGGGAACGGTACTGCTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SSAGEYGDLALLRSR*PSSGSLWERYCSPS
Trigger: GGAGGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCCAGCCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp CATCCTCCTCGGCTGGCGAGTACGGAGACCTGGCCTTaGTCCGGTCCCGCTTGCCCTCCAGTGGGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: HPPRLASTETWP*SGPACPPVGPS
Trigger: AGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCCAGCCGAGGAGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp GTGGACCCCGAGTTGACGGGCTCCCCGGTGCGCGGATaGAGCCAGGTCGTGCAGCGGAGCTGGTCATTGATG +
Preference number: 6 (lower is better)
Translates to: VDPELTGSPVRG*SQVVQRSWSLM
Trigger: CATCAATGACCAGCTCCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAACTCGGGGTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532079.1
CDS CCA 72 bp CCGCACAGATGTGTGCCGGATGATGGTGGCCTCTCTTaGCAGAGGCGGCACAGCCGGGGGCTGGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: PHRCVPDDGGLS*QRRHSRGLVLW
Trigger: CCAGAGGACCAGCCCCCGGCTGTGCCGCCTCTGCCAAGAGAGGCCACCATCATCCGGCACACATCTGTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS CCA 72 bp TACCTGCTCTCAGGGCCCACAAGTCCTAGGGAGGGCTaGGCCATGTCCCCGCTGAGGGTCGCCAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: YLLSGPTSPREG*AMSPLRVASSG
Trigger: GCCTGAGCTGGCGACCCTCAGCGGGGACATGGCCCAGCCCTCCCTAGGACTTGTGGGCCCTGAGAGCAGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS CCA 72 bp GAGCGGGGCACCTCTAGCATGCTCCTGCTCCGGCCCTaGTCGGTGAACTCTGGGGAGCCAAGGCAGATGGGC +
Preference number: 6 (lower is better)
Translates to: ERGTSSMLLLRP*SVNSGEPRQMG
Trigger: GCCCATCTGCCTTGGCTCCCCAGAGTTCACCGACCAGGGCCGGAGCAGGAGCATGCTAGAGGTGCCCCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp CGGTGGCTTCACTGTGACTCGCTCTGCTGGTGTGTGTaGCCGCCGGGGTGGGAAGACCCTTGGGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: RWLHCDSLCWCV*PPGWEDPWGSW
Trigger: CCAGGACCCCCAAGGGTCTTCCCACCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GGAAGAGTCGAACCTCCAGAGGGGTCCGCACAGGGCTaGTGGGAGGACTGGGCTGTGGGGGCGGCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: GRVEPPEGSAQG*WEDWAVGAACS
Trigger: AGAGCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCCCTGTGCGGACCCCTCTGGAGGTTCGACTCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000355661.7
ENST00000525177.1
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000636090.1
ENST00000636113.1
CDS CAA 72 bp GGCGAGTACGGAGACCTGGCCTTGCTCCGGTCCCGCTaGCCCTCCAGTGGGTCCCTCTGGGAACGGTACTGC +
Preference number: 6 (lower is better)
Translates to: GEYGDLALLRSR*PSSGSLWERYC
Trigger: GCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS TCA 72 bp ACACTGCCCCAGCTCCCGGTCTCGCTTCCTCTCGTCTaGCTGCCGCTTGAGGCCCCGCACAGATGTGTGCCG +
Preference number: 6 (lower is better)
Translates to: TLPQLPVSLPLV*LPLEAPHRCVP
Trigger: CGGCACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGAGACCGGGAGCTGGGGCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS TCA 72 bp TCTTCCCTGAGCCAAGATCTCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCAGGCCCGTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSLSQDLQGAAG*GSEMRAGPSSP
Trigger: GGGAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTGGAGATCTTGGCTCAGGGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533901.1
CDS TCA 72 bp GCTTCCATGAGCCAAGATCTCCAGGGAGCGGCCGGCTaGGGTAGCGAGATGAGGGCAGGCCCGTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: ASMSQDLQGAAG*GSEMRAGPSSP
Trigger: GGGAGAGGACGGGCCTGCCCTCATCTCGCTACCTCAGCCGGCCGCTCCCTGGAGATCTTGGCTCATGGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 72 bp TGCCCCAGCTCCCGGTCTCGCTTCCTCTCGTCTGACTaGCGCTTGAGGCCCCGCACAGATGTGTGCCGGATG +
Preference number: 6 (lower is better)
Translates to: CPSSRSRFLSSD*RLRPRTDVCRM
Trigger: CATCCGGCACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGAGAGGAAGCGAGACCGGGAGCTGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS GCA 72 bp ACCCTGAGAGCCCTCTGCCTGGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTCCTAGGGAGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: TLRALCLAASGT*SQGPQVLGRAG
Trigger: CCCAGCCCTCCCTAGGACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS GCA 72 bp ATGTGGCCCGAGTTGACGGGCTCCCCGGTGCGCGGATaGAGCCAGGTCGTGCAGCGGAGCTGGTCATTGATG +
Preference number: 6 (lower is better)
Translates to: MWPELTGSPVRG*SQVVQRSWSLM
Trigger: CATCAATGACCAGCTCCGCTGCACGACCTGGCTGCATCCGCGCACCGGGGAGCCCGTCAACTCGGGCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS GCA 72 bp GCGAGTACGGAGACCTGGCCTTGCTCCGGTCCCGCTTaGCCTCCAGTGGGTCCCTCTGGGAACGGTACTGCT +
Preference number: 6 (lower is better)
Translates to: ASTETWPCSGPA*PPVGPSGNGTA
Trigger: AGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp CCTCCTCTGGTCCGGTGGCTTCACTGTGACTCGCTCTaGTGGTGTGTGTGGCCGCCGGGGTGGGAAGACCCT +
Preference number: 6 (lower is better)
Translates to: PPLVRWLHCDSL*WCVWPPGWEDP
Trigger: AGGGTCTTCCCACCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp GCCCTGCCTTACCTCTGCCTGGCAGCGTCTGGTACCTaGTCTCAGGGCCCACAAGTCCTAGGGAGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ALPYLCLAASGT*SQGPQVLGRAG
Trigger: CCCAGCCCTCCCTAGGACTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGTAAGGCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 72 bp ACAAGGCATCCTCCTCGGCTGGCGAGTACGGAGACCTaGCCTTGCTCCGGTCCCGCTTGCCCTCCAGTGGGT +
Preference number: 6 (lower is better)
Translates to: TRHPPRLASTET*PCSGPACPPVG
Trigger: ACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCCAGCCGAGGAGGATGCCTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp CCTCTGGTCCGGTGGCTTCACTGTGACTCGCTCTGCTaGTGTGTGTGGCCGCCGGGGTGGGAAGACCCTTGG +
Preference number: 6 (lower is better)
Translates to: PLVRWLHCDSLC*CVWPPGWEDPW
Trigger: CCAAGGGTCTTCCCACCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS TCA 72 bp TGTCCACACTCCTCCTCTGGTCCGGTGGCTTCACTGTaGCTCGCTCTGCTGGTGTGTGTGGCCGCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: CPHSSSGPVASL*LALLVCVAAGV
Trigger: CACCCCGGCGGCCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp TCGTCTGACTGCCGCTTGAGGCCCCGCACAGATGTGTaGCGGATGATGGTGGCCTCTCTTGGCAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: SSDCRLRPRTDV*RMMVASLGRGG
Trigger: GCCGCCTCTGCCAAGAGAGGCCACCATCATCCGGCACACATCTGTGCGGGGCCTCAAGCGGCAGTCAGACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531776.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS GCA 72 bp CAGGGCTGGTGGGAGGACTGGGCTGTGGGGGCGGCTTaGTCTCAGAAGTTGAGAGTGAAGGCACAGGCGGGT +
Preference number: 6 (lower is better)
Translates to: QGWWEDWAVGAA*SQKLRVKAQAG
Trigger: ACCCGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355661.7
ENST00000525177.1
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000636090.1
ENST00000636113.1
CDS GCA 72 bp CCCAGAGAAACTCCAGGGAGGGCCCTGCCTTACCTCTaGCTGGCAGCGTCTGGTACCTGCTCTCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PRETPGRALPYL*LAASGTCSQGP
Trigger: TGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGTAAGGCAGGGCCCTCCCTGGAGTTTCTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 72 bp CCACCCGGCCACATTCGTGACAGGACTCTGTGTGGTTaGCCTGGGGGACAGCCTGCCGCTCCACCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PPGHIRDRTLCG*PGGQPAAPPSP
Trigger: TGGAGAAGGTGGAGCGGCAGGCTGTCCCCCAGGCCAACCACACAGAGTCCTGTCACGAATGTGGCCGGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp CGGCTTTGCGGTACCGCGCCTGCAGCTCCTCAAGGCTaGGTGGCTCTTCGGGATCTAGCTCCACGTAGCGCT +
Preference number: 6 (lower is better)
Translates to: RLCGTAPAAPQG*VALRDLAPRSA
Trigger: AGCGCTACGTGGAGCTAGATCCCGAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CAA 72 bp ACAGGGCTGGTGGGAGGACTGGGCTGTGGGGGCGGCTaGCTCTCAGAAGTTGAGAGTGAAGGCACAGGCGGG +
Preference number: 6 (lower is better)
Translates to: TGLVGGLGCGGG*LSEVESEGTGG
Trigger: CCCGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCCCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355661.7
ENST00000525177.1
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000636090.1
ENST00000636113.1
CDS CAA 72 bp ACTCCTCATCAGCTCCTGCAGCACCAGATGCCCCATTaGGCAGGCTGGGGTGGCATGGGCCCTGCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: TPHQLLQHQMPH*AGWGGMGPAAH
Trigger: GTGGGCAGCAGGGCCCATGCCACCCCAGCCTGCCAAATGGGGCATCTGGTGCTGCAGGAGCTGATGAGGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CAA 90 bp ATAAACAAGGCATCCTCCTCGGCTGGCGAGTACGGAGACCTGGCCTaGCTCCGGTCCCGCTTGCCCTCCAGTGGGTCCCTCTGGGAACGG +
Preference number: 6 (lower is better)
Translates to: INKASSSAGEYGDLA*LRSRLPSSGSLWER
Trigger: CCGTTCCCAGAGGGACCCACTGGAGGGCAAGCGGGACCGGAGCAAGGCCAGGTCTCCGTACTCGCCAGCCGAGGAGGATGCCTTGTTTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS TCA 72 bp TCTCTCGTATGTCCGGGTCCCACCCGGCCACATTCGTaGCAGGACTCTGTGTGGTTGGCCTGGGGGACAGCC +
Preference number: 6 (lower is better)
Translates to: SLVCPGPTRPHS*QDSVWLAWGTA
Trigger: GGCTGTCCCCCAGGCCAACCACACAGAGTCCTGTCACGAATGTGGCCGGGTGGGACCCGGACATACGAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp TTGACCGGGCGAGGATGTTGCGGATCTTCTCGGCTTTaGGGTACCGCGCCTGCAGCTCCTCAAGGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LTGRGCCGSSRL*GTAPAAPQGWV
Trigger: CACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 72 bp AGCTGGTTCCACTGGGCCCCTGGCTCCAGGCTTCTTTaGATGCTGGGTCACGGGTCAGTCACTGCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SWFHWAPGSRLL*MLGHGSVTAWA
Trigger: AGCCCAGGCAGTGACTGACCCGTGACCCAGCATGCAAAGAAGCCTGGAGCCAGGGGCCCAGTGGAACCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531066.6
CDS CCA 72 bp GCTGGTTATGGCGAGTGCCTACTTGCTGTCCGGCACTaGGGCAAGGGGTCAAAGGCAGTGTCTGGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: AGYGECLLAVRH*GKGSKAVSGLP
Trigger: CGGGAGGCCAGACACTGCCTTTGACCCCTTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS CCA 72 bp GAGAAACTCCAGGGAGGGCCCTGCCTTACCTCTGCCTaGCAGCGTCTGGTACCTGCTCTCAGGGCCCACAAG +
Preference number: 6 (lower is better)
Translates to: EKLQGGPCLTSA*QRLVPALRAHK
Trigger: CTTGTGGGCCCTGAGAGCAGGTACCAGACGCTGCCAGGCAGAGGTAAGGCAGGGCCCTCCCTGGAGTTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 72 bp AGTGGCACTCTGGAAGGTCTGAGATGGCCAAGGTGGTaGCAGCCACCCAGCACTCCGGCCTACAGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SGTLEGLRWPRW*QPPSTPAYRVQ
Trigger: CTGCACCCTGTAGGCCGGAGTGCTGGGTGGCTGCCACCACCTTGGCCATCTCAGACCTTCCAGAGTGCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 72 bp GTGGACCACCCCAGGCTTCCCTTACATGCAGATGACTaGGCTGCCTGGCAGGTAGAAAGGCTGGCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: VDHPRLPLHADD*AAWQVERLAGQ
Trigger: CTGCCCCGCCAGCCTTTCTACCTGCCAGGCAGCCCAGTCATCTGCATGTAAGGGAAGCCTGGGGTGGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CAA 72 bp CTTGACCGGGCGAGGATGTTGCGGATCTTCTCGGCTTaGCGGTACCGCGCCTGCAGCTCCTCAAGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LDRARMLRIFSA*RYRACSSSRLG
Trigger: ACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CAA 90 bp TTGCACATGCTTGACCGGGCGAGGATGTTGCGGATCTTCTCGGCTTaGCGGTACCGCGCCTGCAGCTCCTCAAGGCTGGGTGGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: LHMLDRARMLRIFSA*RYRACSSSRLGGSS
Trigger: CGAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTCAAGCATGTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 72 bp CGCTTGCCCTCCAGTGGGTCCCTCTGGGAACGGTACTaGTCTCCCTCCTGCTCCTGCCTCTCGAAGTTGACA +
Preference number: 6 (lower is better)
Translates to: RLPSSGSLWERY*SPSCSCLSKLT
Trigger: TGTCAACTTCGAGAGGCAGGAGCAGGAGGGAGAGCAGTACCGTTCCCAGAGGGACCCACTGGAGGGCAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp GAACAGCTGGGCTGGGCACGCAGAGGACAGCCACCCTaGTGGCTGCATTCCCGTTGTCTCTCTCTCACACAC +
Preference number: 6 (lower is better)
Translates to: EQLGWARRGQPP*WLHSRCLSLTH
Trigger: GTGTGTGAGAGAGAGACAACGGGAATGCAGCCAGCAGGGTGGCTGTCCTCTGCGTGCCCAGCCCAGCTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 72 bp TGCGATCCTCAGGGGCCACAGGAGAGATCACGTAGCTaGGCAAGGGGATGCTCCCGAGGACCGCTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: CDPQGPQERSRS*ARGCSRGPLLL
Trigger: GAGAAGAAGCGGTCCTCGGGAGCATCCCCTTGCCCAGCTACGTGATCTCTCCTGTGGCCCCTGAGGATCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp CCCCAGCGAGATGTCCACACTCCTCCTCTGGTCCGGTaGCTTCACTGTGACTCGCTCTGCTGGTGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: PQRDVHTPPLVR*LHCDSLCWCVW
Trigger: CCACACACACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACATCTCGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp CAGCTGGGCTGGGCACGCAGAGGACAGCCACCCTGCTaGCTGCATTCCCGTTGTCTCTCTCTCACACACATG +
Preference number: 6 (lower is better)
Translates to: QLGWARRGQPPC*LHSRCLSLTHM
Trigger: CATGTGTGTGAGAGAGAGACAACGGGAATGCAGCCAGCAGGGTGGCTGTCCTCTGCGTGCCCAGCCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CAA 72 bp GGCTGTAGGTTGCACATGCTTGACCGGGCGAGGATGTaGCGGATCTTCTCGGCTTTGCGGTACCGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: GCRLHMLDRARM*RIFSALRYRAC
Trigger: GCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTCAAGCATGTGCAACCTACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CAA 90 bp GGCTGGTGGGAGGACTGGGCTGTGGGGGCGGCTTGCTCTCAGAAGTaGAGAGTGAAGGCACAGGCGGGTGAGGAAACAAAGGCACCGTTT +
Preference number: 6 (lower is better)
Translates to: GWWEDWAVGAACSQK*RVKAQAGEETKAPF
Trigger: AAACGGTGCCTTTGTTTCCTCACCCGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAAGCCGCCCCCACAGCCCAGTCCTCCCACCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355661.7
ENST00000525177.1
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000636090.1
ENST00000636113.1
CDS TCA 72 bp ATCGAGACAGCACCTGTGCAGCCTGGTTCATGGCCCTaGCCCAAGCGTTCATGTCCTCCTGGGTGTCGGCAC +
Preference number: 6 (lower is better)
Translates to: IETAPVQPGSWP*PKRSCPPGCRH
Trigger: GTGCCGACACCCAGGAGGACATGAACGCTTGGGTCAGGGCCATGAACCAGGCTGCACAGGTGCTGTCTCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp GCTGCCTGGCAGGTAGAAAGGCTGGCGGGGCAGGAATaGCTTTCACCCCCTGATCCATTCTTAGGCACCCTG +
Preference number: 6 (lower is better)
Translates to: AAWQVERLAGQE*LSPPDPFLGTL
Trigger: CAGGGTGCCTAAGAATGGATCAGGGGGTGAAAGGCATTCCTGCCCCGCCAGCCTTTCTACCTGCCAGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS GCA 72 bp ATGTTGCGGATCTTCTCGGCTTTGCGGTACCGCGCCTaGAGCTCCTCAAGGCTGGGTGGCTCTTCGGGATCT +
Preference number: 6 (lower is better)
Translates to: MLRIFSALRYRA*SSSRLGGSSGS
Trigger: AGATCCCGAAGAGCCACCCAGCCTTGAGGAGCTGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 72 bp GCTGTAGGTTGCACATGCTTGACCGGGCGAGGATGTTaGGGATCTTCTCGGCTTTGCGGTACCGCGCCTGCA +
Preference number: 6 (lower is better)
Translates to: AVGCTCLTGRGC*GSSRLCGTAPA
Trigger: TGCAGGCGCGGTACCGCAAAGCCGAGAAGATCCGCAACATCCTCGCCCGGTCAAGCATGTGCAACCTACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 72 bp TGTGTTAGACTCCTCATCAGCTCCTGCAGCACCAGATaGCCCATTTGGCAGGCTGGGGTGGCATGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: CVRLLISSCSTR*PIWQAGVAWAL
Trigger: CAGGGCCCATGCCACCCCAGCCTGCCAAATGGGGCATCTGGTGCTGCAGGAGCTGATGAGGAGTCTAACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CCA 72 bp TATGAGGCAGGCAGCATTCCATTCTTCTCTGCCCGTTaGGGCTGTGCCTGCTGGCCTCTTGGGCCAGTGGGT +
Preference number: 6 (lower is better)
Translates to: YEAGSIPFFSAR*GCACWPLGPVG
Trigger: ACCCACTGGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAATGGAATGCTGCCTGCCTCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GTCTGGTCCAAGGGAAGACTCCTGCTATCCCCTTTCTaGGCCCTTGCCCAGTGCTCCACCTGGGCCAGATTG +
Preference number: 6 (lower is better)
Translates to: VWSKGRLLLSPF*ALAQCSTWARL
Trigger: CAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGGACCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GACAGGGATTGGCCAGGACCCTGGCGAGGAAGCGTCTaGTCCAAGGGAAGACTCCTGCTATCCCCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: DRDWPGPWRGSV*SKGRLLLSPFW
Trigger: CCAGAAAGGGGATAGCAGGAGTCTTCCCTTGGACCAGACGCTTCCTCGCCAGGGTCCTGGCCAATCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GCGCCCGGCGCTCTTCACTCGACATCTTCAGGTGGCTaGCTCGGTCCTGCGCATACTTGTAGTCACTTGGCA +
Preference number: 6 (lower is better)
Translates to: APGALHSTSSGG*LGPAHTCSHLA
Trigger: TGCCAAGTGACTACAAGTATGCGCAGGACCGAGCCAGCCACCTGAAGATGTCGAGTGAAGAGCGCCGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GGAGAATCCCCCAGCGAGATGTCCACACTCCTCCTCTaGTCCGGTGGCTTCACTGTGACTCGCTCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: GESPSEMSTLLL*SGGFTVTRSAG
Trigger: ACCAGCAGAGCGAGTCACAGTGAAGCCACCGGACCAGAGGAGGAGTGTGGACATCTCGCTGGGGGATTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GGTCCTCTGGGCTGTAGAGTTCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCAACTTTGGGCTTCGCCT +
Preference number: 6 (lower is better)
Translates to: GPLGCRVRGVGA*EVLHLQLWASP
Trigger: AGGCGAAGCCCAAAGTTGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCGAACTCTACAGCCCAGAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS CCA 72 bp GGTCCTCTGGGCTGTAGAGTTCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCCTGAACTTTGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: GPLGCRVRGVGA*EVLHLPELWAS
Trigger: CGAAGCCCAAAGTTCAGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCGAACTCTACAGCCCAGAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525781.5
ENST00000530489.5
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS CCA 72 bp CCCAGGCTTCCCTTACATGCAGATGACTGGGCTGCCTaGCAGGTAGAAAGGCTGGCGGGGCAGGAATGCCTT +
Preference number: 6 (lower is better)
Translates to: PRLPLHADDWAA*QVERLAGQECL
Trigger: AAGGCATTCCTGCCCCGCCAGCCTTTCTACCTGCCAGGCAGCCCAGTCATCTGCATGTAAGGGAAGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CAA 90 bp GCGTCTGGTCCAAGGGAAGACTCCTGCTATCCCCTTTCTGGGCCCTaGCCCAGTGCTCCACCTGGGCCAGATTGCTCTTCCTTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: ASGPREDSCYPLSGP*PSAPPGPDCSSFGC
Trigger: ACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAGGAGTCTTCCCTTGGACCAGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CAA 90 bp AGGATGCCTGAATGCTGTGGTCTGCTGGTTATGGCGAGTGCCTACTaGCTGTCCGGCACTGGGGCAAGGGGTCAAAGGCAGTGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: RMPECCGLLVMASAY*LSGTGARGQRQCLA
Trigger: GGCCAGACACTGCCTTTGACCCCTTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS TCA 72 bp GCGCCTTCACTTACTGCGCCCCAATCTGACATGGACTaGTCCTACAGACCCAGGGTAACCTGGCTGGTGCGC +
Preference number: 6 (lower is better)
Translates to: APSLTAPQSDMD*SYRPRVTWLVR
Trigger: GCGCACCAGCCAGGTTACCCTGGGTCTGTAGGATCAGTCCATGTCAGATTGGGGCGCAGTAAGTGAAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS GCA 72 bp GGGCCACAGGAGAGATCACGTAGCTGGGCAAGGGGATaGTCCCGAGGACCGCTTCTTCTCGGCTGTCTTTAT +
Preference number: 6 (lower is better)
Translates to: GPQERSRSWARG*SRGPLLLGCLY
Trigger: ATAAAGACAGCCGAGAAGAAGCGGTCCTCGGGAGCATCCCCTTGCCCAGCTACGTGATCTCTCCTGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp AGACTCCTGCTATCCCCTTTCTGGGCCCTTGCCCAGTaGTCCACCTGGGCCAGATTGCTCTTCCTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: RLLLSPFWALAQ*STWARLLFLWL
Trigger: CAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCAGAAAGGGGATAGCAGGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GGTCCTCTGGGCTGTAGAGTTCGGGGAGTGGGGGCCTaGGAGGTGCTTCATCTTCCTGCTGAGAAAGAGAAC +
Preference number: 6 (lower is better)
Translates to: GPLGCRVRGVGA*EVLHLPAEKEN
Trigger: GTTCTCTTTCTCAGCAGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCGAACTCTACAGCCCAGAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 72 bp TCCTGCAGCTGCAAGTCCAGGTCAGCCACACTGTTCTaGTCCTGGCCTGAGGTCGGCTGTAGGTTGCACATG +
Preference number: 6 (lower is better)
Translates to: SCSCKSRSATLF*SWPEVGCRLHM
Trigger: CATGTGCAACCTACAGCCGACCTCAGGCCAGGACCAGAACAGTGTGGCTGACCTGGACTTGCAGCTGCAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CAA 72 bp CGCTCCAAGGCACTCTTAGGTCTAGGGAAGGTCGCCTaGCTGCTTTCGGCATTGAGACCCCTCCGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: RSKALLGLGKVA*LLSALRPLRSV
Trigger: CACACTCCGGAGGGGTCTCAATGCCGAAAGCAGCAAGGCGACCTTCCCTAGACCTAAGAGTGCCTTGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000532079.1
ENST00000533251.1
ENST00000533901.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS CAA 90 bp TCAGTGTCGCTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATGCTTCTCCTGGGCCGACAGCCC +
Preference number: 6 (lower is better)
Translates to: SVSLSAIFTGFRLRS*RRSRPVMLLLGRQP
Trigger: GGGCTGTCGGCCCAGGAGAAGCATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS CAA 90 bp CTGTCATTTGGGGAGAACACTTCTTATGGGTCTCTCTCACAAAACTaGGGTCCAGGCTTGGCCTCCAGGGTGGAGGCGGTCCCAGCCGTG +
Preference number: 6 (lower is better)
Translates to: LSFGENTSYGSLSQN*GPGLASRVEAVPAV
Trigger: CACGGCTGGGACCGCCTCCACCCTGGAGGCCAAGCCTGGACCCAAGTTTTGTGAGAGAGACCCATAAGAAGTGTTCTCCCCAAATGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS CAA 90 bp TGCTGCAGTAACTGGCTGATGGCGAAATTTCGCACACTGGCCAACTaGGCCTGGTGCCGCCTTAACCGGGTGAGAAGCAACGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: CCSNWLMAKFRTLAN*AWCRLNRVRSNESS
Trigger: GGAGCTCTCGTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTTACTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS TCA 72 bp CTCCTCTGCACTCATCTTGCCTCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGCACTCTTAGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: LLCTHLASLVIP*VQALQGTLRSR
Trigger: CCTAGACCTAAGAGTGCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332954.8
ENST00000355661.7
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000532079.1
ENST00000533901.1
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS TCA 72 bp CCAGGGTGGAGGCGGTCCCAGCCGTGGATGTTTCACTaGCCATGCTGGACGGTCTTTGGTTTCTGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: PGWRRSQPWMFH*PCWTVFGFCLA
Trigger: AGCAAGACAGAAACCAAAGACCGTCCAGCATGGTCAGTGAAACATCCACGGCTGGGACCGCCTCCACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000528637.5
ENST00000529213.1
ENST00000531066.6
ENST00000637162.1
CDS TCA 72 bp AGCCTGACCCGCGCCTTCACTTACTGCGCCCCAATCTaGCATGGACTGATCCTACAGACCCAGGGTAACCTG +
Preference number: 6 (lower is better)
Translates to: SLTRAFTYCAPI*HGLILQTQGNL
Trigger: CAGGTTACCCTGGGTCTGTAGGATCAGTCCATGTCAGATTGGGGCGCAGTAAGTGAAGGCGCGGGTCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS TCA 72 bp GAGTGGGAAAGCAAAGCCTGTACTGGCATAGGAGCCTaGCCCGCGCCTTCACTTACTGCGCCCCAATCTGAC +
Preference number: 6 (lower is better)
Translates to: EWESKACTGIGA*PAPSLTAPQSD
Trigger: GTCAGATTGGGGCGCAGTAAGTGAAGGCGCGGGTCAGGCTCCTATGCCAGTACAGGCTTTGCTTTCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS TCA 72 bp CTCCTCTGCACTCATCTTGCCTCGCTGGTGATCCCCTaGGTACAGGCGCTCCAAGGCACTCTTAGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: LLCTHLASLVIP*VQALQGTLRSL
Trigger: CAGAGACCTAAGAGTGCCTTGGAGCGCCTGTACTCAGGGGATCACCAGCGAGGCAAGATGAGTGCAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS TCA 72 bp CACTGGCCAACTTGGCCTGGTGCCGCCTTAACCGGGTaGGAAGCAACGAGAGCTCCTCCAGCGATTTTCCAT +
Preference number: 6 (lower is better)
Translates to: HWPTWPGAALTG*EATRAPPAIFH
Trigger: ATGGAAAATCGCTGGAGGAGCTCTCGTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS GCA 72 bp TGGGCTGTAGAGTTCGGGGAGTGGGGGCCTGGGAGGTaGTTCATCTTCCTGCTGGAGAGTAACATCTACCCA +
Preference number: 6 (lower is better)
Translates to: WAVEFGEWGPGR*FIFLLESNIYP
Trigger: TGGGTAGATGTTACTCTCCAGCAGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCGAACTCTACAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332954.8
CDS GCA 72 bp AATGCTGTGGTCTGCTGGTTATGGCGAGTGCCTACTTaGTGTCCGGCACTGGGGCAAGGGGTCAAAGGCAGT +
Preference number: 6 (lower is better)
Translates to: NAVVCWLWRVPT*CPALGQGVKGS
Trigger: ACTGCCTTTGACCCCTTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS GCA 72 bp AACTGTCCCGTCACAGGATGCCTGAATGCTGTGGTCTaGTGGTTATGGCCTCCCTTTGGGCTCCACGTTCGG +
Preference number: 6 (lower is better)
Translates to: NCPVTGCLNAVV*WLWPPFGLHVR
Trigger: CCGAACGTGGAGCCCAAAGGGAGGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528376.5
ENST00000528637.5
CDS GCA 72 bp TGGGCTGTAGAGTTCGGGGAGTGGGGGCCTGGGAGGTaGTTCATCTTCCTGAACTTTGGGCTTCGCCTTAGT +
Preference number: 6 (lower is better)
Translates to: WAVEFGEWGPGR*FIFLNFGLRLS
Trigger: ACTAAGGCGAAGCCCAAAGTTCAGGAAGATGAAGCACCTCCCAGGCCCCCACTCCCCGAACTCTACAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525781.5
ENST00000530489.5
ENST00000636090.1
ENST00000636113.1
ENST00000637162.1
CDS GCA 72 bp TGCACGACCCGTTCCAGCAACTGCAGGTCAAAGTCCTaGTCACGCTTCCATGAGCCAAGATCTCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: CTTRSSNCRSKS*SRFHEPRSPGS
Trigger: GCTCCCTGGAGATCTTGGCTCATGGAAGCGTGAGCAGGACTTTGACCTGCAGTTGCTGGAACGGGTCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS GCA 72 bp ATGGCGAAATTTCGCACACTGGCCAACTTGGCCTGGTaGCGCCTTAACCGGGTGAGAAGCAACGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: MAKFRTLANLAW*RLNRVRSNESS
Trigger: GGAGCTCTCGTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CCA 72 bp CTCTTCAGTGACGATCGAGACAGCACCTGTGCAGCCTaGTTCATGGCCCTGACCCAAGCGTTCATGTCCTCC +
Preference number: 6 (lower is better)
Translates to: LFSDDRDSTCAA*FMALTQAFMSS
Trigger: GGAGGACATGAACGCTTGGGTCAGGGCCATGAACCAGGCTGCACAGGTGCTGTCTCGATCGTCACTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp TGTTTTTCAGGGTTGGTCCTGGGAGGAAAGGCCCGCTaGTACCCACCAGTCCCATTCTGTTCTCCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: CFSGLVLGGKAR*YPPVPFCSPGP
Trigger: TGGCCCAGGAGAACAGAATGGGACTGGTGGGTACCAGCGGGCCTTTCCTCCCAGGACCAACCCTGAAAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp GTCACAGGATGCCTGAATGCTGTGGTCTGCTGGTTATaGCGAGTGCCTACTTGCTGTCCGGCACTGGGGCAA +
Preference number: 6 (lower is better)
Translates to: VTGCLNAVVCWL*RVPTCCPALGQ
Trigger: TTGCCCCAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS CCA 72 bp TGTCCCGTCACAGGATGCCTGAATGCTGTGGTCTGCTaGTTATGGCGAGTGCCTACTTGCTGTCCGGCACTG +
Preference number: 6 (lower is better)
Translates to: CPVTGCLNAVVC*LWRVPTCCPAL
Trigger: CAGTGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS CCA 72 bp GACAGGGATTGGCCAGGACCCTGGCGAGGAAGCGTCTaGTCCAAGGGAAGACTGAGGAGAAAGGGTAAGAAC +
Preference number: 6 (lower is better)
Translates to: DRDWPGPWRGSV*SKGRLRRKGKN
Trigger: GTTCTTACCCTTTCTCCTCAGTCTTCCCTTGGACCAGACGCTTCCTCGCCAGGGTCCTGGCCAATCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525781.5
CDS CCA 72 bp CTGCAGGCAGAAGGGTACGAGGCACCAGCTGAAGGCTaGAAGCAGTGTGGTGGGATTCCCAGAGAAACTCCA +
Preference number: 6 (lower is better)
Translates to: LQAEGYEAPAEG*KQCGGIPRETP
Trigger: TGGAGTTTCTCTGGGAATCCCACCACACTGCTTCCAGCCTTCAGCTGGTGCCTCGTACCCTTCTGCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531776.1
CDS CCA 72 bp AGCTGCAAGTCCAGGTCAGCCACACTGTTCTGGTCCTaGCCTGAGGTCGGCTGTAGGTTGCACATGCTTGAC +
Preference number: 6 (lower is better)
Translates to: SCKSRSATLFWS*PEVGCRLHMLD
Trigger: GTCAAGCATGTGCAACCTACAGCCGACCTCAGGCCAGGACCAGAACAGTGTGGCTGACCTGGACTTGCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CCA 72 bp CTGATGGCGAAATTTCGCACACTGGCCAACTTGGCCTaGTGCCGCCTTAACCGGGTGAGAAGCAACGAGAGC +
Preference number: 6 (lower is better)
Translates to: LMAKFRTLANLA*CRLNRVRSNES
Trigger: GCTCTCGTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CAA 90 bp GAGAACACTTCTTATGGGTCTCTCTCACAAAACTTGGGTCCAGGCTaGGCCTCCAGGGTGGAGGCGGTCCCAGCCGTGGATGTTTCACTG +
Preference number: 6 (lower is better)
Translates to: ENTSYGSLSQNLGPG*ASRVEAVPAVDVSL
Trigger: CAGTGAAACATCCACGGCTGGGACCGCCTCCACCCTGGAGGCCAAGCCTGGACCCAAGTTTTGTGAGAGAGACCCATAAGAAGTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS TCA 72 bp TCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCATGCTTCTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SQRSSQASDFDP*EGPGLSCFSWA
Trigger: GGCCCAGGAGAAGCATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS TCA 72 bp GCTCCTCCAGCGATTTTCCATGTAAACTGGGAGCGCTaGCGGTGTGGGTCATGTAACCCATGGAGGGCATGG +
Preference number: 6 (lower is better)
Translates to: APPAIFHVNWER*RCGSCNPWRAW
Trigger: CCATGCCCTCCATGGGTTACATGACCCACACCGTCAGCGCTCCCAGTTTACATGGAAAATCGCTGGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS GCA 72 bp AACTGTCCCGTCACAGGATGCCTGAATGCTGTGGTCTaGTGGTTATGGCGAGTGCCTACTTGCTGTCCGGCA +
Preference number: 6 (lower is better)
Translates to: NCPVTGCLNAVV*WLWRVPTCCPA
Trigger: TGCCGGACAGCAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS GCA 72 bp GGAATTAAGCGGTGTGTTAGACTCCTCATCAGCTCCTaGAGCACCAGATGCCCCATTTGGCAGGCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: GIKRCVRLLISS*STRCPIWQAGV
Trigger: CACCCCAGCCTGCCAAATGGGGCATCTGGTGCTGCAGGAGCTGATGAGGAGTCTAACACACCGCTTAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CCA 72 bp ATTGGCCCTACACGAGCTCTGGCGCCTTCAGCAAGGTaGGGACCTGAACAAGGACAGAGTCTACATCCTCCT +
Preference number: 6 (lower is better)
Translates to: IGPTRALAPSAR*GPEQGQSLHPP
Trigger: AGGAGGATGTAGACTCTGTCCTTGTTCAGGTCCCCACCTTGCTGAAGGCGCCAGAGCTCGTGTAGGGCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332954.8
CDS CCA 72 bp AGGGAGCAATGGTGGACGACTGCTGGAGCCTTGACGTaGACCCTGAGAGCCCTTAGTGAGGAAAGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: REQWWTTAGALT*TLRALSEEREV
Trigger: CACTTCTCTTTCCTCACTAAGGGCTCTCAGGGTCCACGTCAAGGCTCCAGCAGTCGTCCACCATTGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531776.1
ENST00000533251.1
CDS CAA 72 bp CTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATCTGGGAGGCGAAC +
Preference number: 6 (lower is better)
Translates to: LSAIFTGFRLRS*RRSRPVIWEAN
Trigger: GTTCGCCTCCCAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531079.1
CDS CAA 72 bp CTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATGCTTCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: LSAIFTGFRLRS*RRSRPVMLLLG
Trigger: GCCCAGGAGAAGCATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS CAA 72 bp AACTGGCTGATGGCGAAATTTCGCACACTGGCCAACTaGGCCTGGTGCCGCCTTAACCGGGTGAGAAGCAAC +
Preference number: 6 (lower is better)
Translates to: NWLMAKFRTLAN*AWCRLNRVRSN
Trigger: GTTGCTTCTCACCCGGTTAAGGCGGCACCAGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS TCA 72 bp TGCCTCTCGAAGTTGACAATGTCATCATGGCCACGATaGGGACAATCTCTCGTATGTCCGGGTCCCACCCGG +
Preference number: 6 (lower is better)
Translates to: CLSKLTMSSWPR*GQSLVCPGPTR
Trigger: CCGGGTGGGACCCGGACATACGAGAGATTGTCCTCATCGTGGCCATGATGACATTGTCAACTTCGAGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS TCA 72 bp TCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCATCTGGGAGGCGAACA +
Preference number: 6 (lower is better)
Translates to: SQRSSQASDFDP*EGPGLSSGRRT
Trigger: TGTTCGCCTCCCAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531079.1
CDS TCA 72 bp AGGTGGGAAAGGTCAGCTGGTGCTGCAGTAACTGGCTaGTGGCGAAATTTCGCACACTGGCCAACTTGGCCT +
Preference number: 6 (lower is better)
Translates to: RWERSAGAAVTG*WRNFAHWPTWP
Trigger: AGGCCAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTTACTGCAGCACCAGCTGACCTTTCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS CCA 72 bp CTATCCCCTTTCTGGGCCCTTGCCCAGTGCTCCACCTaGGCCAGATTGCTCTTCCTTTGGCTGTGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: LSPFWALAQCST*ARLLFLWLCFS
Trigger: TGAAAAACACAGCCAAAGGAAGAGCAATCTGGCCCAGGTGGAGCACTGGGCAAGGGCCCAGAAAGGGGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp TGGCAGGTGGGAAAGGTCAGCTGGTGCTGCAGTAACTaGCTGATGGCGAAATTTCGCACACTGGCCAACTTG +
Preference number: 6 (lower is better)
Translates to: WQVGKVSWCCSN*LMAKFRTLANL
Trigger: CAAGTTGGCCAGTGTGCGAAATTTCGCCATCAGCCAGTTACTGCAGCACCAGCTGACCTTTCCCACCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637162.1
CDS TCA 72 bp GGTACTGCTCTCCCTCCTGCTCCTGCCTCTCGAAGTTaGCAATGTCATCATGGCCACGATGAGGACAATCTC +
Preference number: 6 (lower is better)
Translates to: GTALPPAPASRS*QCHHGHDEDNL
Trigger: GAGATTGTCCTCATCGTGGCCATGATGACATTGTCAACTTCGAGAGGCAGGAGCAGGAGGGAGAGCAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355661.7
ENST00000531066.6
ENST00000637162.1
CDS TCA 72 bp ACGATAAGATCCAACCATGACTGTCCAGCTCCGTGGTaGCTTCCTGTTGACCCAGGACCTGCATCCTCACAG +
Preference number: 6 (lower is better)
Translates to: TIRSNHDCPAPW*LPVDPGPASSQ
Trigger: CTGTGAGGATGCAGGTCCTGGGTCAACAGGAAGTCACCACGGAGCTGGACAGTCATGGTTGGATCTTATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533901.1
CDS TCA 72 bp GCCTGTCATGCTTCTCCTGGGCCGACAGCCCCGTGCTaGCTTCTTCAGCACTTTGTAAAGCACGTTGATCAA +
Preference number: 6 (lower is better)
Translates to: ACHASPGPTAPC*LLQHFVKHVDQ
Trigger: TTGATCAACGTGCTTTACAAAGTGCTGAAGAAGTCAGCACGGGGCTGTCGGCCCAGGAGAAGCATGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636113.1
CDS GCA 72 bp TTCTGGAGAAAACTGTCCCGTCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATGGCCTCCCTTTGGGCT +
Preference number: 6 (lower is better)
Translates to: FWRKLSRHRMPE*CGLLVMASLWA
Trigger: AGCCCAAAGGGAGGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528376.5
ENST00000528637.5
CDS CCA 72 bp ATTCCATTCTTCTCTGCCCGTTGGGGCTGTGCCTGCTaGCCTCTTGGGCCAGTGGGTAAATCCATAAACAAG +
Preference number: 6 (lower is better)
Translates to: IPFFSARWGCAC*PLGPVGKSINK
Trigger: CTTGTTTATGGATTTACCCACTGGCCCAAGAGGCCAGCAGGCACAGCCCCAACGGGCAGAGAAGAATGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355661.7
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CCA 72 bp ACGGGTCAGGCAACCAAGCGAGGGTTCTGCAGGCTTTaGGGAACATATCTAAGTAAACCCACAAAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: TGQATKRGFCRL*GTYLSKPTKLG
Trigger: GCCCAGCTTTGTGGGTTTACTTAGATATGTTCCCCAAAGCCTGCAGAACCCTCGCTTGGTTGCCTGACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525781.5
CDS CAA 90 bp GGCGGTCCCAGCCGTGGATGTTTCACTGACCATGCTGGACGGTCTTaGGTTTCTGTCTTGCTTCGACATATGTGGATTCGGCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GGPSRGCFTDHAGRS*VSVLLRHMWIRLFL
Trigger: CAAGAAGAGCCGAATCCACATATGTCGAAGCAAGACAGAAACCAAAGACCGTCCAGCATGGTCAGTGAAACATCCACGGCTGGGACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000528637.5
ENST00000529213.1
ENST00000531066.6
CDS CAA 90 bp TCAGTGTCGCTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATCTTTAGATCCAGGTACTCCAGG +
Preference number: 6 (lower is better)
Translates to: SVSLSAIFTGFRLRS*RRSRPVIFRSRYSR
Trigger: CCTGGAGTACCTGGATCTAAAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CAA 90 bp TCAGTGTCGCTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATCTTTTCAGACCCACAGCTGACT +
Preference number: 6 (lower is better)
Translates to: SVSLSAIFTGFRLRS*RRSRPVIFSDPQLT
Trigger: AGTCAGCTGTGGGTCTGAAAAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525581.2
CDS CAA 90 bp TGTGCTGGGGTGGATGGGTCCCTGCTTCTCCCTCATCACACATTCTaGCAGGAGTACCAAGAGCACCCAGTCAATGACCCACCCTTATTT +
Preference number: 6 (lower is better)
Translates to: CAGVDGSLLLPHHTF*QEYQEHPVNDPPLF
Trigger: AAATAAGGGTGGGTCATTGACTGGGTGCTCTTGGTACTCCTGCAAGAATGTGTGATGAGGGAGAAGCAGGGACCCATCCACCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531776.1
ENST00000533251.1
CDS CAA 90 bp TGGACCCTGAGAGCCCTTAGTGAGGAAAGAGAAGTGCAAGCATGTTaGTGCTGGGGTGGATGGGTCCCTGCTTCTCCCTCATCACACATT +
Preference number: 6 (lower is better)
Translates to: WTLRALSEEREVQAC*CWGGWVPASPSSHI
Trigger: AATGTGTGATGAGGGAGAAGCAGGGACCCATCCACCCCAGCACAAACATGCTTGCACTTCTCTTTCCTCACTAAGGGCTCTCAGGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531776.1
ENST00000533251.1
CDS TCA 72 bp TCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCATCTTTTCAGACCCAC +
Preference number: 6 (lower is better)
Translates to: SQRSSQASDFDP*EGPGLSSFQTH
Trigger: GTGGGTCTGAAAAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525581.2
CDS GCA 72 bp TTCTGGAGAAAACTGTCCCGTCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATGGCGAGTGCCTACTTG +
Preference number: 6 (lower is better)
Translates to: FWRKLSRHRMPE*CGLLVMASAYL
Trigger: CAAGTAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS GCA 72 bp CTGCCTGCTGTCTCTCAATTTCGGTTCTTGAGCAGCTaGCTCCCAAGGTGTTACAAATCCAGCAGCCACTTG +
Preference number: 6 (lower is better)
Translates to: LPAVSQFRFLSS*LPRCYKSSSHL
Trigger: CAAGTGGCTGCTGGATTTGTAACACCTTGGGAGGCAGCTGCTCAAGAACCGAAATTGAGAGACAGCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS CAA 72 bp CTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATCTTTAGATCCAGG +
Preference number: 6 (lower is better)
Translates to: LSAIFTGFRLRS*RRSRPVIFRSR
Trigger: CCTGGATCTAAAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS CAA 72 bp CTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATCTTTTCAGACCCA +
Preference number: 6 (lower is better)
Translates to: LSAIFTGFRLRS*RRSRPVIFSDP
Trigger: TGGGTCTGAAAAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525581.2
CDS CAA 72 bp TTTGGACAGCTCTCTGCTGATGTCCAAGTCATAGTCTaGAGGCTCCAGGTCCAACTCAGTGACAGGCATGGC +
Preference number: 6 (lower is better)
Translates to: FGQLSADVQVIV*RLQVQLSDRHG
Trigger: GCCATGCCTGTCACTGAGTTGGACCTGGAGCCTCAAGACTATGACTTGGACATCAGCAGAGAGCTGTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CAA 90 bp CTTCTCTGGTTTGGACAGCTCTCTGCTGATGTCCAAGTCATAGTCTaGAGGCTCCAGGTCCAACTCAGTGACAGGCATGGCCTGCACTTT +
Preference number: 6 (lower is better)
Translates to: LLWFGQLSADVQVIV*RLQVQLSDRHGLHF
Trigger: AAAGTGCAGGCCATGCCTGTCACTGAGTTGGACCTGGAGCCTCAAGACTATGACTTGGACATCAGCAGAGAGCTGTCCAAACCAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531066.6
ENST00000636090.1
ENST00000637162.1
CDS CAA 90 bp TCAGTGTCGCTCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTaGAGAAGGTCCCGGCCTGTCATCTGGGAGGCGAACAATTTAAAA +
Preference number: 6 (lower is better)
Translates to: SVSLSAIFTGFRLRS*RRSRPVIWEANNLK
Trigger: TTTTAAATTGTTCGCCTCCCAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGAGCGACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531079.1
CDS TCA 72 bp TCTCAGCGATCTTCACAGGCTTCAGACTTCGATCCTTaGGAAGGTCCCGGCCTGTCATCTTTAGATCCAGGT +
Preference number: 6 (lower is better)
Translates to: SQRSSQASDFDP*EGPGLSSLDPG
Trigger: ACCTGGATCTAAAGATGACAGGCCGGGACCTTCTCAAGGATCGAAGTCTGAAGCCTGTGAAGATCGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000637162.1
CDS GCA 72 bp TCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATaGCTGAATGCTGTGGTCTGCTGGTTATGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: SLFSGENCPVTG*LNAVVCWLWPP
Trigger: GGGAGGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528376.5
ENST00000528637.5
CDS GCA 72 bp AGGGTAAGAACGGGTCAGGCAACCAAGCGAGGGTTCTaGAGGCTTTGGGGAACATATCTAAGTAAACCCACA +
Preference number: 6 (lower is better)
Translates to: RVRTGQATKRGF*RLWGTYLSKPT
Trigger: TGTGGGTTTACTTAGATATGTTCCCCAAAGCCTGCAGAACCCTCGCTTGGTTGCCTGACCCGTTCTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525781.5
CDS CCA 72 bp GAAAGAGAAGTGCAAGCATGTTTGTGCTGGGGTGGATaGGTCCCTGCTTCTCCCTCATCACACATTCTTGCA +
Preference number: 6 (lower is better)
Translates to: EREVQACLCWGG*VPASPSSHILA
Trigger: TGCAAGAATGTGTGATGAGGGAGAAGCAGGGACCCATCCACCCCAGCACAAACATGCTTGCACTTCTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531776.1
ENST00000533251.1
CDS CAA 90 bp TTTAAGGGCTCGTATCTTGTCTTCCAAGTCCTGGAGGACCCTGTCTaGTTCACAGAAGATGCTCAGTTTGACGTCAGTGTCGCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: FKGSYLVFQVLEDPV*FTEDAQFDVSVALS
Trigger: GCTGAGAGCGACACTGACGTCAAACTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525581.2
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531079.1
ENST00000636113.1
ENST00000637162.1
CDS TCA 72 bp TTGCTCTCAGAAGTTGAGAGTGAAGGCACAGGCGGGTaGGGAAACAAAGGCACCGTTTTTCTCTCCGGATTT +
Preference number: 6 (lower is better)
Translates to: LLSEVESEGTGG*GNKGTVFLSGF
Trigger: AAATCCGGAGAGAAAAACGGTGCCTTTGTTTCCTCACCCGCCTGTGCCTTCACTCTCAACTTCTGAGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355661.7
ENST00000525177.1
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000636090.1
ENST00000636113.1
CDS TCA 72 bp TATTTTCTGGAGAAAACTGTCCCGTCACAGGATGCCTaGATGCTGTGGTCTGCTGGTTATGGCGAGTGCCTA +
Preference number: 6 (lower is better)
Translates to: YFLEKTVPSQDA*MLWSAGYGECL
Trigger: TAGGCACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS TCA 72 bp TATTTTCTGGAGAAAACTGTCCCGTCACAGGATGCCTaGATGCTGTGGTCTGCTGGTTATGGCCTCCCTTTG +
Preference number: 6 (lower is better)
Translates to: YFLEKTVPSQDA*MLWSAGYGLPL
Trigger: CAAAGGGAGGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528376.5
ENST00000528637.5
CDS GCA 72 bp TTCTGGAGAAAACTGTCCCGTCACAGGATGCCTGAATaGTGTGGTCTGCTGGTTATGGTCGATGAAGTAGCT +
Preference number: 6 (lower is better)
Translates to: FWRKLSRHRMPE*CGLLVMVDEVA
Trigger: AGCTACTTCATCGACCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS GCA 72 bp TCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATaGCTGAATGCTGTGGTCTGCTGGTTATGGCGAGTG +
Preference number: 6 (lower is better)
Translates to: SLFSGENCPVTG*LNAVVCWLWRV
Trigger: CACTCGCCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529213.1
CDS GCA 72 bp CTTTGGGCTCCACGTTCGGATAGTGTCTTCCCCAGCTaGACCACCTTATTAAATCTTAGGTTCAGGTCAGAC +
Preference number: 6 (lower is better)
Translates to: LWAPRSDSVFPS*TTLLNLRFRSD
Trigger: GTCTGACCTGAACCTAAGATTTAATAAGGTGGTGCAGCTGGGGAAGACACTATCCGAACGTGGAGCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS TCA 72 bp TGGAAGTCCTTGGCAGTGGCAGGTAGGGTCATAGTATaGGAGGGACAAAAACTTGGGCCATACTTCGCTATT +
Preference number: 6 (lower is better)
Translates to: WKSLAVAGRVIV*EGQKLGPYFAI
Trigger: AATAGCGAAGTATGGCCCAAGTTTTTGTCCCTCTCATACTATGACCCTACCTGCCACTGCCAAGGACTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531079.1
CDS GCA 72 bp TCACTATTTTCTGGAGAAAACTGTCCCGTCACAGGATaGCTGAATGCTGTGGTCTGCTGGTTATGGTCGATG +
Preference number: 6 (lower is better)
Translates to: SLFSGENCPVTG*LNAVVCWLWSM
Trigger: CATCGACCATAACCAGCAGACCACAGCATTCAGGCATCCTGTGACGGGACAGTTTTCTCCAGAAAATAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355661.7
ENST00000531066.6
CDS GCA 72 bp GCTGTGGACTTTACTGCTGGACTTTATGATCTGTTCTaGTGGACAAGGGACATATCCCTCTTGGCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: AVDFTAGLYDLF*WTRDISLLASV
Trigger: AACTGAGGCCAAGAGGGATATGTCCCTTGTCCAGCAGAACAGATCATAAAGTCCAGCAGTAAAGTCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS CCA 72 bp GTGGACTTTACTGCTGGACTTTATGATCTGTTCTGCTaGACAAGGGACATATCCCTCTTGGCCTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: VDFTAGLYDLFC*TRDISLLASVS
Trigger: GGAAACTGAGGCCAAGAGGGATATGTCCCTTGTCCAGCAGAACAGATCATAAAGTCCAGCAGTAAAGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS CAA 72 bp TCGTATCTTGTCTTCCAAGTCCTGGAGGACCCTGTCTaGTTCACAGAAGATGCTCAGTTTGACGTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: SYLVFQVLEDPV*FTEDAQFDVSV
Trigger: GACACTGACGTCAAACTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525581.2
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531079.1
ENST00000636113.1
ENST00000637162.1
CDS CAA 90 bp AGCACAGATTCTAGCTGGTCTTTGTTCTCTTTAAGGGCTCGTATCTaGTCTTCCAAGTCCTGGAGGACCCTGTCTTGTTCACAGAAGATG +
Preference number: 6 (lower is better)
Translates to: STDSSWSLFSLRARI*SSKSWRTLSCSQKM
Trigger: CATCTTCTGTGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAAAGAGAACAAAGACCAGCTAGAATCTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525581.2
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531079.1
ENST00000636113.1
ENST00000637162.1
CDS CCA 72 bp TTCTCTTTAAGGGCTCGTATCTTGTCTTCCAAGTCCTaGAGGACCCTGTCTTGTTCACAGAAGATGCTCAGT +
Preference number: 6 (lower is better)
Translates to: FSLRARILSSKS*RTLSCSQKMLS
Trigger: ACTGAGCATCTTCTGTGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525581.2
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531079.1
ENST00000636113.1
ENST00000637162.1
CDS CAA 72 bp TTCACTGACCATGCTGGACGGTCTTTGGTTTCTGTCTaGCTTCGACATATGTGGATTCGGCTCTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: FTDHAGRSLVSV*LRHMWIRLFLK
Trigger: CTTCAAGAAGAGCCGAATCCACATATGTCGAAGCAAGACAGAAACCAAAGACCGTCCAGCATGGTCAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000528637.5
ENST00000529213.1
ENST00000531066.6
CDS CAA 72 bp TCTAGCTGGTCTTTGTTCTCTTTAAGGGCTCGTATCTaGTCTTCCAAGTCCTGGAGGACCCTGTCTTGTTCA +
Preference number: 6 (lower is better)
Translates to: SSWSLFSLRARI*SSKSWRTLSCS
Trigger: TGAACAAGACAGGGTCCTCCAGGACTTGGAAGACAAGATACGAGCCCTTAAAGAGAACAAAGACCAGCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355661.7
ENST00000525049.5
ENST00000525581.2
ENST00000525781.5
ENST00000530489.5
ENST00000531066.6
ENST00000531079.1
ENST00000636113.1
ENST00000637162.1
CDS CAA 90 bp CGTGGATGTTTCACTGACCATGCTGGACGGTCTTTGGTTTCTGTCTaGCTTCGACATATGTGGATTCGGCTCTTCTTGAAGAATGAATTC +
Preference number: 6 (lower is better)
Translates to: RGCFTDHAGRSLVSV*LRHMWIRLFLKNEF
Trigger: GAATTCATTCTTCAAGAAGAGCCGAATCCACATATGTCGAAGCAAGACAGAAACCAAAGACCGTCCAGCATGGTCAGTGAAACATCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355661.7
ENST00000528376.5
ENST00000528637.5
ENST00000529213.1
ENST00000531066.6
CDS TCA 72 bp TCTTCCCAAAGCTGTGGACTTTACTGCTGGACTTTATaGTCTGTTCTGCTGGACAAGGGACATATCCCTCTT +
Preference number: 6 (lower is better)
Translates to: SSQSCGLYCWTL*SVLLDKGHIPL
Trigger: AAGAGGGATATGTCCCTTGTCCAGCAGAACAGATCATAAAGTCCAGCAGTAAAGTCCACAGCTTTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528637.5
CDS CAA 72 bp GAGGTTTCACATGTGAATTATTTACATCGTGCAGCTTaGGGAACAAGGAACCACAGCAGACCAACACATCAG +
Preference number: 6 (lower is better)
Translates to: EVSHVNYLHRAA*GTRNHSRPTHQ
Trigger: CTGATGTGTTGGTCTGCTGTGGTTCCTTGTTCCCAAAGCTGCACGATGTAAATAATTCACATGTGAAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525049.5
CDS GCA 72 bp ATAACTCGAGGTTTCACATGTGAATTATTTACATCGTaGAGCTTTGGGAACAAGGAACCACAGCAGACCAAC +
Preference number: 6 (lower is better)
Translates to: ITRGFTCELFTS*SFGNKEPQQTN
Trigger: GTTGGTCTGCTGTGGTTCCTTGTTCCCAAAGCTGCACGATGTAAATAATTCACATGTGAAACCTCGAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525049.5
CDS GCA 72 bp AGCAGTCCAGCTTGCCTACCTAATTTAAAAACAGACTaGCGTAAACACTGTGCCATTCCGCTAAAATACTGT +
Preference number: 6 (lower is better)
Translates to: SSPACLPNLKTD*RKHCAIPLKYC
Trigger: ACAGTATTTTAGCGGAATGGCACAGTGTTTACGGCAGTCTGTTTTTAAATTAGGTAGGCAAGCTGGACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525177.1
CDS GCA 72 bp GGGAGAAATTTCAGAGTAGCTTTCAGCAGTCCAGCTTaGCTACCTAATTTAAAAACAGACTGCCGTAAACAC +
Preference number: 6 (lower is better)
Translates to: GRNFRVAFSSPA*LPNLKTDCRKH
Trigger: GTGTTTACGGCAGTCTGTTTTTAAATTAGGTAGGCAAGCTGGACTGCTGAAAGCTACTCTGAAATTTCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525177.1
CDS GCA 72 bp CTTCATAGCTTTCTAGGTAAGCATAGACAAGGAAAATaGCCACGATCCAGGGAGAAATTTCAGAGTAGCTTT +
Preference number: 6 (lower is better)
Translates to: LHSFLGKHRQGK*PRSREKFQSSF
Trigger: AAAGCTACTCTGAAATTTCTCCCTGGATCGTGGGCATTTTCCTTGTCTATGCTTACCTAGAAAGCTATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525177.1
CDS TCA 72 bp AACACCAAGAGTTTCCATAACTCGAGGTTTCACATGTaGATTATTTACATCGTGCAGCTTTGGGAACAAGGA +
Preference number: 6 (lower is better)
Translates to: NTKSFHNSRFHM*IIYIVQLWEQG
Trigger: TCCTTGTTCCCAAAGCTGCACGATGTAAATAATTCACATGTGAAACCTCGAGTTATGGAAACTCTTGGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525049.5