RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000143850

Ensembl transcript IDs: ENST00000272203.8, ENST00000414478.1, ENST00000485632.1, ENST00000564627.2, ENST00000637508.1, ENST00000672625.1

Found 1126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGCTCCCCACTGTCATCTCAGGCCCTGGCCCAGGACCACGGTGTaGGTAGTGATGGCTCCAGGGCTGGGCATGGTGGGTGTGTGGACA +
Preference number: 1 (lower is better)
Translates to: GAPHCHLRPWPRTTV*VVMAPGLGMVGVWT
Trigger: TGTCCACACACCCACCATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTGAGATGACAGTGGGGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 90 bp GTGGGGAGCCAGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTaGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCTTGCA +
Preference number: 1 (lower is better)
Translates to: VGSQDLRWAEDGFRM*LCGASQHWPQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCTGGCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 90 bp CTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTaGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGCAC +
Preference number: 1 (lower is better)
Translates to: LWEPMASPHLSSPCL*LKQGGQSPPDPSEH
Trigger: GTGCTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 90 bp TGGGTGAGCTCTGGGGACCAGCCCTTTCGTGACTGGGGAATAGGATaGAAGGAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGAC +
Preference number: 1 (lower is better)
Translates to: WVSSGDQPFRDWGIG*KEATVAEGQAQGWD
Trigger: GTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTCCTTCCATCCTATTCCCCAGTCACGAAAGGGCTGGTCCCCAGAGCTCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 90 bp GGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTaGCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCT +
Preference number: 1 (lower is better)
Translates to: GPKADHTLHKTSPSL*PLPQDGEADTRHRP
Trigger: AGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 90 bp ACAAGTCCAAGGAACTTGTATGTGTCTGTGCTACAGGGCCAGGGATaGCCCAGAGGATCCCAAGCCGCCTCCTCTGGGCTTCGCACCGTC +
Preference number: 1 (lower is better)
Translates to: TSPRNLYVSVLQGQG*PRGSQAASSGLRTV
Trigger: GACGGTGCGAAGCCCAGAGGAGGCGGCTTGGGATCCTCTGGGCCATCCCTGGCCCTGTAGCACAGACACATACAAGTTCCTTGGACTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 90 bp GCCTGCTGGGGTAAAGTCCCGGGGGTTTCTTGGGTGAGGTTGAGATaGCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGATTTC +
Preference number: 1 (lower is better)
Translates to: ACWGKVPGVSWVRLR*HLVCRTLLGPEADF
Trigger: GAAATCAGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCAAGAAACCCCCGGGACTTTACCCCAGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 90 bp GGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTCAAGCAGGGTaGTCAGTCTCCACCGGACCCCAGCGAGCACCCATAAGCAAAGCA +
Preference number: 1 (lower is better)
Translates to: GLSPSLITLSLAQAG*SVSTGPQRAPISKA
Trigger: TGCTTTGCTTATGGGTGCTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 90 bp AAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAACATaGCTCTCCCAAAGGCCGGAGAGCAAGTGTGCCACTTGTGCCCTT +
Preference number: 1 (lower is better)
Translates to: KELVPSCRSQPCPRT*LSQRPESKCATCAL
Trigger: AAGGGCACAAGTGGCACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 90 bp TGCTGTTCTCTAGCCACAGCCAGCACTGTTCCCTCTGGGAGCCAATaGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTCAAGCAGG +
Preference number: 1 (lower is better)
Translates to: CCSLATASTVPSGSQ*PLPISHHLVFGSSR
Trigger: CCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAACAGTGCTGGCTGTGGCTAGAGAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR TCA 90 bp CCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTaGGGCAGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGT +
Preference number: 1 (lower is better)
Translates to: PISKALGLCQSPGSS*GSRVGLTRIGMMTS
Trigger: ACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACTGCCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 90 bp GCTGGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATaGAACTGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATA +
Preference number: 1 (lower is better)
Translates to: AGPLHIPGGTGQEIS*NWVGKAPRLTTPYI
Trigger: TATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR TCA 90 bp ACCCTCCTTGGCCCAGAGGCTGATTTCACAGTCTGGATACCAGACTaGGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGTTGCA +
Preference number: 1 (lower is better)
Translates to: TLLGPEADFTVWIPD*GTMPLVQPPERKVA
Trigger: TGCAACCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGACTGTGAAATCAGCCTCTGGGCCAAGGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 90 bp TCCAGCAGGCTGATGAAGAGGGGTAGTCTAGCAGCCCATCTGGGGTaGATGCCTGCATGGGTCTCCTTTGTGCATACAACTGCAAACAGT +
Preference number: 1 (lower is better)
Translates to: SSRLMKRGSLAAHLG*MPAWVSFVHTTANS
Trigger: ACTGTTTGCAGTTGTATGCACAAAGGAGACCCATGCAGGCATGCACCCCAGATGGGCTGCTAGACTACCCCTCTTCATCAGCCTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 90 bp GCACCGTCTCGTACACTGACATCCTTAGTGCTGTTTGGCATAGGCTaGTGTTACGCTGTCTGCTCTTTCCAGCAGGCTGATGAAGAGGGG +
Preference number: 1 (lower is better)
Translates to: APSRTLTSLVLFGIG*CYAVCSFQQADEEG
Trigger: CCCCTCTTCATCAGCCTGCTGGAAAGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTACGAGACGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR TCA 90 bp CATCCTGCCCAAATCCTTGCAAGGCCAGAGACCCTTTCCCCACTTTaGTGGTTGACAAAGGCTAAGCAGCTTGGAAGGCTGAGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: HPAQILARPETLSPL*WLTKAKQLGRLSWL
Trigger: AAGCCAGCTCAGCCTTCCAAGCTGCTTAGCCTTTGTCAACCATCAAAGTGGGGAAAGGGTCTCTGGCCTTGCAAGGATTTGGGCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 90 bp CCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTaGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAA +
Preference number: 1 (lower is better)
Translates to: PLHIPGGTGQEISWN*VGKAPRLTTPYIRQ
Trigger: TTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 90 bp GATTCCCAAGCCCTTGATTTCAGACCTAGACAAAGACTTCCATCCTaGCCAAATCCTTGCAAGGCCAGAGACCCTTTCCCCACTTTGATG +
Preference number: 1 (lower is better)
Translates to: DSQALDFRPRQRLPS*PNPCKARDPFPTLM
Trigger: CATCAAAGTGGGGAAAGGGTCTCTGGCCTTGCAAGGATTTGGGCAGGATGGAAGTCTTTGTCTAGGTCTGAAATCAAGGGCTTGGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 90 bp TCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTaGAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGC +
Preference number: 1 (lower is better)
Translates to: SLLAYEPVTVPAMKE*RGISRCSWDRWKSG
Trigger: GCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 90 bp CTTGATTTCAGACCTAGACAAAGACTTCCATCCTGCCCAAATCCTTaGAAGGCCAGAGACCCTTTCCCCACTTTGATGGTTGACAAAGGC +
Preference number: 1 (lower is better)
Translates to: LDFRPRQRLPSCPNP*KARDPFPTLMVDKG
Trigger: GCCTTTGTCAACCATCAAAGTGGGGAAAGGGTCTCTGGCCTTGCAAGGATTTGGGCAGGATGGAAGTCTTTGTCTAGGTCTGAAATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 90 bp CAGTATTTGACTGCAGCCTCTTGGTTATTGATCATGGAGGTAATGTaGTCATTGAGAAGGCCCTGGATGAATAATCAGAGCTTCCCCAGG +
Preference number: 1 (lower is better)
Translates to: QYLTAASWLLIMEVM*SLRRPWMNNQSFPR
Trigger: CCTGGGGAAGCTCTGATTATTCATCCAGGGCCTTCTCAATGAGCACATTACCTCCATGATCAATAACCAAGAGGCTGCAGTCAAATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 90 bp CAGGGTTGGGACCTAAAGGCAGTTACCCCATCTCCTCACCTCATTTaGCAATTCCATTCAGACATTGCACAATTTGAAAATAGATTTGCT +
Preference number: 1 (lower is better)
Translates to: QGWDLKAVTPSPHLI*QFHSDIAQFENRFA
Trigger: AGCAAATCTATTTTCAAATTGTGCAATGTCTGAATGGAATTGGCAAATGAGGTGAGGAGATGGGGTAACTGCCTTTAGGTCCCAACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCCTGCGGCATTCCCATaGGAGTGCAGGGGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRPAAFP*ECRGRG
Trigger: CCCCCTGCCCCTGCACTCCCATGGGAATGCCGCAGG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGTATCCACGGTCCTCTaGCAGCAGCCCATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHVSTVL*QQPMAP
Trigger: TGGGGCCATGGGCTGCTGCCAGAGGACCGTGGATAC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCCTCTGTCTTCCCCGCTaGCCTCCCGGGGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPLCLPR*PPGAGG
Trigger: TCCACCTGCCCCGGGAGGGCAGCGGGGAAGACAGAG...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCCCCAGGACCACGGTGTaGGTAGTGATGGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: APYPRMARQTPGTDLLTAPRTTV*VVMAPG
Trigger: CCCTGGAGCCATCACTACTCACACCGTGGTCCTGGG...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCATTCCCATGGGAGTaGAGGGGCAGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSAFPWE*RGRGPG
Trigger: CCCTGGCCCCCTGCCCCTGCACTCCCATGGGAATGC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCCTGCGGCATTCCCATaGGAGTGCAGGGGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRPAAFP*ECRGRG
Trigger: CCCCCTGCCCCTGCACTCCCATGGGAATGCCGCAGG...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCCCAGGACCACGGTGTaGGTAGTGATGGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRPRTTV*VVMAPG
Trigger: CCCTGGAGCCATCACTACTCACACCGTGGTCCTGGG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCAGCCAGGACCTCAGGTaGGCAGAGGACGGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: APYPRMARQTPGTDLLTASQDLR*AEDGFR
Trigger: TCTGAAGCCGTCCTCTGCCCACCTGAGGTCCTGGCT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTGTATCCACGGTCCTCTaGCAGCAGCCCATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCVSTVL*QQPMAP
Trigger: TGGGGCCATGGGCTGCTGCCAGAGGACCGTGGATAC...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CAA 90 bp GTGGCAGCCTGCTGGGGTAAAGTCCCGGGGGTTTCTTGGGTGAGGTaGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: VAACWGKVPGVSWVR*RCHLVCRTLLGPEA
Trigger: AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCAAGAAACCCCCGGGACTTTACCCCAGCAGGCTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTCCCTCCTTCCTGCTTaGCTTGCCAATGTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRSLLPA*LANVSC
Trigger: GCAGGACACATTGGCAAGTCAAGCAGGAAGGAGGGA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTGGGGCAGGTGGATCATaGGAGCGCCTAGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRGAGGS*ERLASA
Trigger: GGCTGAGGCTAGGCGCTCTCATGATCCACCTGCCCC...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCTGTCTCTCTCTCTCTaGTACCCTTCCCAACCTGCC +
Preference number: 2 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRLSLSL*YPSQPA
Trigger: GGCAGGTTGGGAAGGGTAGCAGAGAGAGAGAGACAG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATCAGAATGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHQNVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTG...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGTCCTTGGTGTCAGGCTaGCTCCAGAGGCAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: DFRGNALPPARCFLGELWSLVSG*LQRQCP
Trigger: TGGACACTGCCTCTGGAGCCAGCCTGACACCAAGGA...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCATTGGCTCAAGCAGGGTaGTCAGTCTCCACCGGACCC +
Preference number: 2 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPLAQAG*SVSTGP
Trigger: GGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAA...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCCAGCCAGTCCTCGTCTaGGATGCCTGGGATAGGGGG +
Preference number: 2 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTQPVLV*DAWDRG
Trigger: CCCCCTATCCCAGGCATCCCAGACGAGGACTGGCTG...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTCCAAGCCGCCTCCTCTaGGCTTCGCACCGTCTCGTA +
Preference number: 2 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAPSRLL*ASHRLV
Trigger: TACGAGACGGTGCGAAGCCCAGAGGAGGCGGCTTGG...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CAA 90 bp CTGTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTaGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAG +
Preference number: 2 (lower is better)
Translates to: LFPLGANGLSPSLIT*SLAQAGWSVSTGPQ
Trigger: CTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGCATTCCCATGGGAGTaGAGGGGCAGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLAFPWE*RGRGPG
Trigger: CCCTGGCCCCCTGCCCCTGCACTCCCATGGGAATGC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGGCATGGTGGGTGTGTaGACACTGAGGTATCCACGG +
Preference number: 2 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPGMVGV*TLRYPR
Trigger: CCGTGGATACCTCAGTGTCCACACACCCACCATGCC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCAGGGAATGTTCCACTaGAGTCACCACAACCCCAGC +
Preference number: 2 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGQGMFH*SHHNPS
Trigger: GCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGTCCTTGGTGTCAGGCTaGCTCCAGAGGCAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPASLVSG*LQRQCP
Trigger: TGGACACTGCCTCTGGAGCCAGCCTGACACCAAGGA...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTCAGCCAGTCCTCGTCTaGGATGCCTGGGATAGGGGG +
Preference number: 2 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRQPVLV*DAWDRG
Trigger: CCCCCTATCCCAGGCATCCCAGACGAGGACTGGCTG...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTGGGGCAGGTGGATCATaGGAGCGCCTAGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: AEELVGVLGTAGSQAEASGAGGS*ERLASA
Trigger: GGCTGAGGCTAGGCGCTCTCATGATCCACCTGCCCC...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGCTACCCTTCCCAACCTaGCCTCAGACACTGCACAGA +
Preference number: 2 (lower is better)
Translates to: PRMARQTPGTDLLTAISQLPFPT*PQTLHR
Trigger: TCTGTGCAGTGTCTGAGGGCAGGTTGGGAAGGGTAG...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCACAAGTCCTTCTCTCTaGCCCTTACCCCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPTSPSL*PLPQDG
Trigger: GCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGTATCCACGGTCCTCTaGCAGCAGCCCATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRVSTVL*QQPMAP
Trigger: TGGGGCCATGGGCTGCTGCCAGAGGACCGTGGATAC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTCAGGGAATGTTCCACTaGAGTCACCACAACCCCAGC +
Preference number: 2 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCQGMFH*SHHNPS
Trigger: GCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTG...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTCATCACCTTGTCTTTaGCTCAAGCAGGGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRSSPCL*LKQGGQ
Trigger: CTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCCCTCCCGGGGCAGGTaGATCATGAGAGCGCCTAGC +
Preference number: 2 (lower is better)
Translates to: AEELVGVLGTAGSQAEASPSRGR*IMRAPS
Trigger: GCTAGGCGCTCTCATGATCCACCTGCCCCGGGAGGG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCTGGGTGTGTGGACACTaGGGTATCCACGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPWVCGH*GIHGPL
Trigger: CAGAGGACCGTGGATACCTCAGTGTCCACACACCCA...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGACACTGCACAGACCTaGTGTTCTCTAGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: PGTDLLTAISQAVATQPPDTAQT*CSLATA
Trigger: GGCTGTGGCTAGAGAACAGCAGGTCTGTGCAGTGTC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGCCTTCCTGCTTGACTTaGCAATGTGTCCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: DFRGNALPPARCFLGELWPSCLT*QCVLLL
Trigger: AAGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGG...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGTGGGTGTGTGGACACTaGGGTATCCACGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRWVCGH*GIHGPL
Trigger: CAGAGGACCGTGGATACCTCAGTGTCCACACACCCA...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCAGGGATGATGACAAGTaGTGTCCTTGGTGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPRDDDK*CPWCQA
Trigger: AGCCTGACACCAAGGACAGCACTTGTCATCATCCCT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTCTACCCTTCCCAACCTaGCCTCAGACACTGCACAGA +
Preference number: 2 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRLPFPT*PQTLHR
Trigger: TCTGTGCAGTGTCTGAGGGCAGGTTGGGAAGGGTAG...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCAGGGCAGGTTTGGGGTaGTTGAACTGTGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTRAGLG*LNCEDG
Trigger: CCCATCTTCACAGTTCAAGCACCCCAAACCTGCCCT...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCCAGAATGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTQNVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTG...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGAGGCTCCCTGTGACTTaGACATTAATGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGRLPVT*TLMRMV
Trigger: CACCATCCTCATTAATGTCCAAGTCACAGGGAGCCT...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTGGGTGTGTGGACACTaGGGTATCCACGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLWVCGH*GIHGPL
Trigger: CAGAGGACCGTGGATACCTCAGTGTCCACACACCCA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGGCATGGTGGGTGTGTaGACACTGAGGTATCCACGG +
Preference number: 2 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLGMVGV*TLRYPR
Trigger: CCGTGGATACCTCAGTGTCCACACACCCACCATGCC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCGGGCAAGAAATATCATaGAACTGGGTAGGTAAGGCC +
Preference number: 2 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPGQEIS*NWVGKA
Trigger: GGCCTTACCTACCCAGTTCCATGATATTTCTTGCCC...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCCCTCCCGGGGCAGGTaGATCATGAGAGCGCCTAGC +
Preference number: 2 (lower is better)
Translates to: EPVTVPAMKECRGISRCSPSRGR*IMRAPS
Trigger: GCTAGGCGCTCTCATGATCCACCTGCCCCGGGAGGG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTATTAGTAGGTGTTCTTaGGACCGCTGGAAGTCAGGC +
Preference number: 2 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAISRCS*DRWKSG
Trigger: GCCTGACTTCCAGCGGTCCCAAGAACACCTACTAAT...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR GCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGCTACCCTTCCCAACCTaGCCTCAGACACTGCACAGA +
Preference number: 2 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERLPFPT*PQTLHR
Trigger: TCTGTGCAGTGTCTGAGGGCAGGTTGGGAAGGGTAG...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTACTTGCCAATGTGTCCTaGTGCTTCCCCCTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVLANVS*CFPLLP
Trigger: TGGAAGGAGGGGGAAGCAGCAGGACACATTGGCAAG...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCTTGCCAATGTGTCCTaGTGCTTCCCCCTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLLANVS*CFPLLP
Trigger: TGGAAGGAGGGGGAAGCAGCAGGACACATTGGCAAG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGAACAAGTCCTTCTCTCTaGCCCTTACCCCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: TLARSSALDSQALDFRPRTSPSL*PLPQDG
Trigger: GCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGT...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR GCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGAGGAGGAATGCGTTTaGTTTTCTCTGTCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFEEECV*FSLSSP
Trigger: CGGGGAAGACAGAGAAAAGCAAACGCATTCCTCCTC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGACGGCTTCAGAATGTaGCTCTGTGGAGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVDGFRM*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGACGGCTTCAGAATGTaGCTCTGTGGAGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRDGFRM*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCCCCTTACCCCAGGATaGCGAGGCAGACACCAGGCA +
Preference number: 2 (lower is better)
Translates to: EPVTVPAMKECRGISRCSPLTPG*RGRHQA
Trigger: TGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CAA 90 bp CCAGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTaGTATGTGTCTGTGCTACAGGGCCAGGGATGGCCCAGAGGATCC +
Preference number: 2 (lower is better)
Translates to: PERDQVKRSVTSPRN*YVSVLQGQGWPRGS
Trigger: GGATCCTCTGGGCCATCCCTGGCCCTGTAGCACAGACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR TCA 90 bp TACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCCAGAGGATTCACGCCTaGCAACCGCAGAGGGTCATC +
Preference number: 2 (lower is better)
Translates to: YTDILSAVWHRLLLRCLLQRIHA*QPQRVI
Trigger: GATGACCCTCTGCGGTTGTCAGGCGTGAATCCTCTG...GAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCCCCTTACCCCAGGATaGCGAGGCAGACACCAGGCA +
Preference number: 2 (lower is better)
Translates to: YEPVTVPAMKECRGISRCPLTPG*RGRHQA
Trigger: TGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp TACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTCCCTCCTTCCTGCTTaGCTTGCCAATGTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: YTDILSAVWHRLLLRCLLSLLPA*LANVSC
Trigger: GCAGGACACATTGGCAAGTCAAGCAGGAAGGAGGGA...GAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR TCA 90 bp TTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGATTTCACAGTCTGGATACCAGACTaGGGTACCATGCCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: LRCHLVCRTLLGPEADFTVWIPD*GTMPLV
Trigger: TACCAAAGGCATGGTACCTCAGTCTGGTATCCAGAC...TGTGAAATCAGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR GCA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGACAAAGACTTCCATCCTaGCCAAATCCTTGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: TLARSSALDSQALDFRPRQRLPS*PNPCKA
Trigger: GGCCTTGCAAGGATTTGGGCAGGATGGAAGTCTTTG...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTTCCTTGGTGTCAGGCTaGCTCCAGAGGCAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: EPVTVPAMKECRGISRCSSLVSG*LQRQCP
Trigger: TGGACACTGCCTCTGGAGCCAGCCTGACACCAAGGA...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp CCTAAAGGGGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAAGGGCAAGAAATATCATaGAACTGGGTAGGTAAGGCC +
Preference number: 2 (lower is better)
Translates to: PKGERNWFPLAVASPAQEGQEIS*NWVGKA
Trigger: GGCCTTACCTACCCAGTTCCATGATATTTCTTGCCC...TTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTAGGCGTACTCTCAGCTaGCCCACTGCACATTCCAGG +
Preference number: 2 (lower is better)
Translates to: EPVTVPAMKECRGISRCSRRTLS*PTAHSR
Trigger: CCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCT...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp ACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTAGAGAGGAAATGACCTaGGAGCCAATCCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: TLTSLVLFGIGCCYAVCSREEMT*EPIPPA
Trigger: GGCAGGTGGGATTGGCTCCCAGGTCATTTCCTCTCT...AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCCTGCGGCATTCCCATaGGAGTGCAGGGGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAPAAFP*ECRGRG
Trigger: CCCCCTGCCCCTGCACTCCCATGGGAATGCCGCAGG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCAGGCTCCCTGTGACTTaGACATTAATGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLRLPVT*TLMRMV
Trigger: CACCATCCTCATTAATGTCCAAGTCACAGGGAGCCT...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCATGTGCTCCACTGGTaGGTCCTCCTAGGGATGAGG +
Preference number: 2 (lower is better)
Translates to: YEPVTVPAMKECRGISRCHVLHW*VLLGMR
Trigger: CCTCATCCCTAGGAGGACCCACCAGTGGAGCACATG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTGACGGCTTCAGAATGTaGCTCTGTGGAGCTTCACAG +
Preference number: 2 (lower is better)
Translates to: EPVTVPAMKECRGISRCSDGFRM*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTC...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGCATGGTGGGTGTGTaGACACTGAGGTATCCACGG +
Preference number: 2 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRGMVGV*TLRYPR
Trigger: CCGTGGATACCTCAGTGTCCACACACCCACCATGCC...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGACCTGCCCTCAGACACTaGACAGACCTGCTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRPALRH*TDLLFS
Trigger: AGAGAACAGCAGGTCTGTGCAGTGTCTGAGGGCAGG...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGACTGTCTCTCTCTCTCTaGTACCCTTCCCAACCTGCC +
Preference number: 2 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRLSLSL*YPSQPA
Trigger: GGCAGGTTGGGAAGGGTAGCAGAGAGAGAGAGACAG...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCCTTCCTGCTTGACTTaGCAATGTGTCCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: EPVTVPAMKECRGISRCSPSCLT*QCVLLL
Trigger: AAGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR GCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCCTTCCTGCTTGACTTaGCAATGTGTCCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: YEPVTVPAMKECRGISRCPSCLT*QCVLLL
Trigger: AAGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR TCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCCAGGTGGGTGGAGCTaGGGAGGAATGCGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAPGGWS*GGMRLL
Trigger: AAGCAAACGCATTCCTCCTCAGCTCCACCCACCTGG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR-3UTR GCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGAGGAGGAATGCGTTTaGTTTTCTCTGTCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: SSLLAYEPVTVPAMKECREEECV*FSLSSP
Trigger: CGGGGAAGACAGAGAAAAGCAAACGCATTCCTCCTC...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCAGGCGTACTCTCAGCTaGCCCACTGCACATTCCAGG +
Preference number: 2 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPARRTLS*PTAHSR
Trigger: CCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCT...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR-3UTR TCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCCCCTCCTTCCACTCTaGGGATCTCTCTCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAPLLPL*GSLSLS
Trigger: AGAGAGAGAGAGAGATCCTCAGAGTGGAAGGAGGGG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR-3UTR GCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCGACACTGCACAGACCTaGTGTTCTCTAGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPADTAQT*CSLATA
Trigger: GGCTGTGGCTAGAGAACAGCAGGTCTGTGCAGTGTC...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR-3UTR GCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCCTGCCCTCAGACACTaGACAGACCTGCTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAPALRH*TDLLFS
Trigger: AGAGAACAGCAGGTCTGTGCAGTGTCTGAGGGCAGG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAAGGCTCCCTGTGACTTaGACATTAATGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRRLPVT*TLMRMV
Trigger: CACCATCCTCATTAATGTCCAAGTCACAGGGAGCCT...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCTCATCACCTTGTCTTTaGCTCAAGCAGGGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPASSPCL*LKQGGQ
Trigger: CTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR TCA 72 bp TGTCTTCCCCGCTGCCCTCCCGGGGCAGGTGGATCATaGGAGCGCCTAGCCTCAGCCAGTCCTCGTCTGGGA +
Preference number: 3 (lower is better)
Translates to: CLPRCPPGAGGS*ERLASASPRLG
Trigger: TCCCAGACGAGGACTGGCTGAGGCTAGGCGCTCTCATGATCCACCTGCCCCGGGAGGGCAGCGGGGAAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR TCA 72 bp TGGCTCCAGGGCTGGGCATGGTGGGTGTGTGGACACTaGGGTATCCACGGTCCTCTGGCAGCAGCCCATGGC +
Preference number: 3 (lower is better)
Translates to: WLQGWAWWVCGH*GIHGPLAAAHG
Trigger: GCCATGGGCTGCTGCCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR TCA 72 bp CACTGTCATCTCAGGCCCTGGCCCAGGACCACGGTGTaGGTAGTGATGGCTCCAGGGCTGGGCATGGTGGGT +
Preference number: 3 (lower is better)
Translates to: HCHLRPWPRTTV*VVMAPGLGMVG
Trigger: ACCCACCATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTGAGATGACAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp GTAGTGATGGCTCCAGGGCTGGGCATGGTGGGTGTGTaGACACTGAGGTATCCACGGTCCTCTGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: VVMAPGLGMVGV*TLRYPRSSGSS
Trigger: GCTGCTGCCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGAGCCATCACTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp CCACCACGGCATGTCCCCCATCAGGGAATGTTCCACTaGAGTCACCACAACCCCAGCCAGGGCAAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: PPRHVPHQGMFH*SHHNPSQGKAE
Trigger: CTCAGCCTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGACATGCCGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp CTAGGCTGGCGACAGGGTGTCAGTAAATGCCCCAGGTaGGAGGCCAGGCTTCAAACGCTGGCCAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: LGWRQGVSKCPR*EARLQTLARSS
Trigger: AGAGCTCCTGGCCAGCGTTTGAAGCCTGGCCTCCCACCTGGGGCATTTACTGACACCCTGTCGCCAGCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 72 bp GTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAACATaGCTCTCCCAAAGGCCGGAGAGCAAGTGTGCCACT +
Preference number: 3 (lower is better)
Translates to: VPSCRSQPCPRT*LSQRPESKCAT
Trigger: AGTGGCACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 72 bp CAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTaGAGCTTCACAGCATTGGCCTCAGCCAGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: QVGRGRLQNVAL*SFTALASARAC
Trigger: GCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 72 bp GGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTaGCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGC +
Preference number: 3 (lower is better)
Translates to: GKELVPSCRSQP*PRTCLSQRPES
Trigger: GCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 72 bp CAGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTaGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: QDLRWAEDGFRM*LCGASQHWPQP
Trigger: TGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp CCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTaGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCC +
Preference number: 3 (lower is better)
Translates to: PMASPHLSSPCL*LKQGGQSPPDP
Trigger: GGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp GTGGCAGCCTGCTGGGGTAAAGTCCCGGGGGTTTCTTaGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACC +
Preference number: 3 (lower is better)
Translates to: VAACWGKVPGVS*VRLRCHLVCRT
Trigger: GGTCCTACAGACAAGGTGGCATCTCAACCTCACCCAAGAAACCCCCGGGACTTTACCCCAGCAGGCTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 72 bp TGGTTGACAAAGGCTAAGCAGCTTGGAAGGCTGAGCTaGCTTAGTTCGGTGCCCCAGTGGCAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: WLTKAKQLGRLS*LSSVPQWQPAG
Trigger: CCCAGCAGGCTGCCACTGGGGCACCGAACTAAGCCAGCTCAGCCTTCCAAGCTGCTTAGCCTTTGTCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CAA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCCATCTCTCATCACCTaGTCTTTGGCTCAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRPSLIT*SLAQAG
Trigger: CCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CAA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGTCCTTCCTGCTTGACTaGCCAATGTGTCCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: PRMARQTPGTDLLTAISQSFLLD*PMCPAA
Trigger: AGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGGA...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 72 bp ACCCTTCCCAACCTGCCCTCAGACACTGCACAGACCTaGTGTTCTCTAGCCACAGCCAGCACTGTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: TLPNLPSDTAQT*CSLATASTVPS
Trigger: AGAGGGAACAGTGCTGGCTGTGGCTAGAGAACAGCAGGTCTGTGCAGTGTCTGAGGGCAGGTTGGGAAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 72 bp GCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTaGCCCTTACCCCAGGATGGCGAGGCAGACACCAGG +
Preference number: 3 (lower is better)
Translates to: ADHTLHKTSPSL*PLPQDGEADTR
Trigger: CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 72 bp GGTAAAGTCCCGGGGGTTTCTTGGGTGAGGTTGAGATaGCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GKVPGVSWVRLR*HLVCRTLLGPE
Trigger: CTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCAAGAAACCCCCGGGACTTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CAA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGAGGCTCCCTGTGACTaGGACATTAATGAGGATGGT +
Preference number: 3 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPEAPCD*DINEDG
Trigger: ACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CAA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGCTCCCTGTGACTaGGACATTAATGAGGATGGT +
Preference number: 3 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSEAPCD*DINEDG
Trigger: ACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCCATCTCTCATCACCTaGTCTTTGGCTCAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFPSLIT*SLAQAG
Trigger: CCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGG...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp TCACAGTCTGGATACCAGACTGAGGTACCATGCCTTTaGTACAGCCCCCAGAGAGAAAGGTTGCAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: SQSGYQTEVPCL*YSPQRERLQRG
Trigger: CCCCCTCTGCAACCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGACTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 72 bp ATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTaGGTAGGTAAGGCCCCAAGGCTGACCACACCCTAC +
Preference number: 3 (lower is better)
Translates to: IPGGTGQEISWN*VGKAPRLTTPY
Trigger: GTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp CTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATaGAACTGGGTAGGTAAGGCCCCAAGGCTGACCACA +
Preference number: 3 (lower is better)
Translates to: LHIPGGTGQEIS*NWVGKAPRLTT
Trigger: TGTGGTCAGCCTTGGGGCCTTACCTACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CCA 72 bp GGTAGTCTAGCAGCCCATCTGGGGTGCATGCCTGCATaGGTCTCCTTTGTGCATACAACTGCAAACAGTTCC +
Preference number: 3 (lower is better)
Translates to: GSLAAHLGCMPA*VSFVHTTANSS
Trigger: GGAACTGTTTGCAGTTGTATGCACAAAGGAGACCCATGCAGGCATGCACCCCAGATGGGCTGCTAGACTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CAA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTATCCTTCCTGCTTGACTaGCCAATGTGTCCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVSFLLD*PMCPAA
Trigger: AGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGGA...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR TCA 72 bp ACAACTGCAAACAGTTCCTTCCAGAGGATTCACGCCTaGCAACCGCAGAGGGTCATCAGGAGCAGACAGTGT +
Preference number: 3 (lower is better)
Translates to: TTANSSFQRIHA*QPQRVIRSRQC
Trigger: ACACTGTCTGCTCCTGATGACCCTCTGCGGTTGTCAGGCGTGAATCCTCTGGAAGGAACTGTTTGCAGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CCA 72 bp CGCACCGTCTCGTACACTGACATCCTTAGTGCTGTTTaGCATAGGCTGCTGTTACGCTGTCTGCTCTTTCCA +
Preference number: 3 (lower is better)
Translates to: RTVSYTDILSAV*HRLLLRCLLFP
Trigger: TGGAAAGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTACGAGACGGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR TCA 72 bp CAAATCCTTGCAAGGCCAGAGACCCTTTCCCCACTTTaGTGGTTGACAAAGGCTAAGCAGCTTGGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: QILARPETLSPL*WLTKAKQLGRL
Trigger: CAGCCTTCCAAGCTGCTTAGCCTTTGTCAACCATCAAAGTGGGGAAAGGGTCTCTGGCCTTGCAAGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 72 bp GCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTaGAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGG +
Preference number: 3 (lower is better)
Translates to: AYEPVTVPAMKE*RGISRCSWDRW
Trigger: CCAGCGGTCCCAAGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR GCA 72 bp CTGATTTCACAGTCTGGATACCAGACTGAGGTACCATaGCTTTGGTACAGCCCCCAGAGAGAAAGGTTGCAG +
Preference number: 3 (lower is better)
Translates to: LISQSGYQTEVP*LWYSPQRERLQ
Trigger: CTGCAACCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGACTGTGAAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR-3UTR CAA 90 bp AGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTTGTATGTGTCGAGGCTCCCTGTGACTaGGACATTAATGAGGATGGT +
Preference number: 3 (lower is better)
Translates to: REGSSEKECDKSKELVCVEAPCD*DINEDG
Trigger: ACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTC...GACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR TCA 72 bp AAAGATGCTAAGGGGATGCTACAGCTGTTTGTCCCCTaGCAGAGATTCCATCTATCTAACCTTCACCCTTCT +
Preference number: 3 (lower is better)
Translates to: KDAKGMLQLFVP*QRFHLSNLHPS
Trigger: AGAAGGGTGAAGGTTAGATAGATGGAATCTCTGTCAGGGGACAAACAGCTGTAGCATCCCCTTAGCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 72 bp GACCTAAAGGCAGTTACCCCATCTCCTCACCTCATTTaGCAATTCCATTCAGACATTGCACAATTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: DLKAVTPSPHLI*QFHSDIAQFEN
Trigger: ATTTTCAAATTGTGCAATGTCTGAATGGAATTGGCAAATGAGGTGAGGAGATGGGGTAACTGCCTTTAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR GCA 72 bp TGTCTAATACTAGCAAATCAAATTGGCCCCAATATGTaGATAAATAGATATACGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: CLILANQIGPNM*INRYTCVCVCV
Trigger: CACACACACACACACACACGTATATCTATTTATGCACATATTGGGGCCAATTTGATTTGCTAGTATTAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGGCGGGCTGTGCGAGTTaGCCGGACGCTGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRAGCAS*PDAGPL
Trigger: GAGCGGCCCAGCGTCCGGGCAACTCGCACAGCCCGC...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGAGGGCTGCCCGGCTCTaGGGCTGGCTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWRAARL*GWLRSS
Trigger: GCTGGACCGGAGCCAGCCTCAGAGCCGGGCAGCCCT...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGGGGCCCAGGGCGGGCTaGTCCGATCATAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRGPRAG*SDHRPA
Trigger: TGCCGGCCTATGATCGGATCAGCCCGCCCTGGGCCC...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGGCGGGCTGTGCGAGTTaGCCGGACGCTGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWAGCAS*PDAGPL
Trigger: GAGCGGCCCAGCGTCCGGGCAACTCGCACAGCCCGC...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGCCAGGAAGGGGAGCTaGGGTAGGGCCAGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHARKGS*GRARSG
Trigger: GCCGCTTCTGGCCCTACCCCAGCTCCCCTTCCTGGC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGGGGCCCAGGGCGGGCTaGTCCGATCATAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWGPRAG*SDHRPA
Trigger: TGCCGGCCTATGATCGGATCAGCCCGCCCTGGGCCC...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGGGGCAGGTGGATCATaGGAGCGCCTAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHGAGGS*ERLASA
Trigger: GGCTGAGGCTAGGCGCTCTCATGATCCACCTGCCCC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATTCAGCTCGGAGCTGCTaGACCAGCCGGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHSARSC*TSRSCS
Trigger: GGAGCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGA...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCCCCGCCAGGCTCCTCTaGCCGCAGGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPPARLL*PQGCLQ
Trigger: CTGGAGGCAGCCCTGCGGGCAGAGGAGCCTGGCGGG...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCTGTTCCCCACCCCCTaGCACTCTTGGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRLFPTP*HSWALG
Trigger: CCCGAGGGCCCAAGAGTGCCAGGGGGTGGGGAACAG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGGCCGGCTTGGGGAGTaGTACTGCCAGCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHGRLGE*YCQPLG
Trigger: GCCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCCTGCCGCCCGTAGCTaGCGGGCTCCTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRPAARS*RAPSTL
Trigger: GAGAGTGGAAGGAGCCCGCCAGCTACGGGCGGCAGG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATCTGCCGGGAGGGGCTTaGGATCCAGACGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHLPGGA*DPDGGI
Trigger: GATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAG...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGGAGCCAGGCTTGGTaGGGGACCCCTGAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRWSQAW*GTPESP
Trigger: CGGGCTCTCAGGGGTCCCCCACCAAGCCTGGCTCCA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATCGACAGGGGGTTTGCTaGAGGAGCCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHRQGVC*RSRGSR
Trigger: CCTGCTTCCCCGGCTCCTCCAGCAAACCCCCTGTCG...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGCGGCTTCTGAGGTGTaGTCCCCGCGCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHAASEV*SPRWKA
Trigger: AGCTTTCCAGCGCGGGGATCACACCTCAGAAGCCGC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR TCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCAGGGCTGCCCGGCTCTaGGGCTGGCTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGRAARL*GWLRSS
Trigger: GCTGGACCGGAGCCAGCCTCAGAGCCGGGCAGCCCT...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCAGGGCCGTGGTCGCCTaGGACAGCTCCACGCGGATG +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTARAVVA*DSSTRM
Trigger: CATCCGCGTGGAGCTGTCTCAGGCGACCACGGCCCT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATTGGATCCAGGCCTCTTaGTCCTCGGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHWIQAS*SSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCA...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGGCATTCCCATGGGAGTaGAGGGGCAGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWAFPWE*RGRGPG
Trigger: CCCTGGCCCCCTGCCCCTGCACTCCCATGGGAATGC...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGCAGCCCATCTGGGGTaGATGCCTGCATGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHAAHLG*MPAWVS
Trigger: GGAGACCCATGCAGGCATGCACCCCAGATGGGCTGC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGGACGCTGGGCCGCTCTaGAGGGACCTCGGACACCAT +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRDAGPL*RDLGHH
Trigger: ATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAGCGTC...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATTCCGCTTCTCCCTCATaGAGCCACTCTGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHSASPS*SHSGAA
Trigger: GGCGGCACCAGAGTGGCTCCATGAGGGAGAAGCGGA...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGGCTGTCGGCGCCCCGTaGGGATTCAGACGACAGGGG +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWAVGAP*GFRRQG
Trigger: CCCCTGTCGTCTGAATCCCCACGGGGCGCCGACAGC...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGCCTGCGGCATTCCCATaGGAGTGCAGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWPAAFP*ECRGRG
Trigger: CCCCCTGCCCCTGCACTCCCATGGGAATGCCGCAGG...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATCAGCCAGTCCTCGTCTaGGATGCCTGGGATAGGGGG +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHQPVLV*DAWDRG
Trigger: CCCCCTATCCCAGGCATCCCAGACGAGGACTGGCTG...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCGGAGCTGGCCTGTTTaGAGAGCCAGCCCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGRSWPV*RASPPW
Trigger: CCAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTCCG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACCC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTARGSRH*RSRCGP
Trigger: GGGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCG...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCAGGGCTGCCCGGCTCTaGGGCTGGCTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPRAARL*GWLRSS
Trigger: GCTGGACCGGAGCCAGCCTCAGAGCCGGGCAGCCCT...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCACGGCTTTGCGGGCTGTaGGAGTTGCCCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPRLCGL*ELPGRW
Trigger: CCAGCGTCCGGGCAACTCGCACAGCCCGCAAAGCCG...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGTCAGCTCGGAGCTGCTaGACCAGCCGGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWSARSC*TSRSCS
Trigger: GGAGCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGA...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGGGCTGGCCGGGAGCTaGAGGCTCCTCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRGLAGS*RLLRFS
Trigger: GGAGAAGCGGAGGAGCCTGCAGCTCCCGGCCAGCCC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCTCTGCCCGCAGGGCTaGCTCCAGGTTGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRLCPQG*LQVGDV
Trigger: GACATCTCCAACCTGGAGGCAGCCCTGCGGGCAGAG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCCCCGCCAGGCTCCTCTaGCCGCAGGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPPARLL*PQGCLQ
Trigger: CTGGAGGCAGCCCTGCGGGCAGAGGAGCCTGGCGGG...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGGCATTCCCATGGGAGTaGAGGGGCAGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAAFPWE*RGRGPG
Trigger: CCCTGGCCCCCTGCCCCTGCACTCCCATGGGAATGC...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGCATTCCCATGGGAGTaGAGGGGCAGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQAFPWE*RGRGPG
Trigger: CCCTGGCCCCCTGCCCCTGCACTCCCATGGGAATGC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGGCCTCCCCCATGGCCTaGATCCAGGCCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWASPMA*IQASCS
Trigger: GGAGCAAGAGGCCTGGATCCAGGCCATGGGGGAGGC...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGTGGTGCTTGCTGGGTaGGACGTTCTCCGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHVVLAG*DVLRVW
Trigger: CCAGACTCGGAGAACGTCCCACCCAGCAAGCACCAC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGCTCCCTGGCCGGCTTaGGGAGTGGTACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPAPWPA*GVVLPA
Trigger: GGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGCTCCCTGGCCGGCTTaGGGAGTGGTACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKAPWPA*GVVLPA
Trigger: GGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGAGGGTTGGTGCGTGGTaGGAAACTCCGCCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRRVGAW*ETPPVS
Trigger: GGACACCGGCGGAGTTTCCCACCACGCACCAACCCT...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCCATTGCGGAAGGCATaGCGCTTGTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRPLRKA*RLSSRA
Trigger: GGCCCTGGAGGACAAGCGCCATGCCTTCCGCAATGG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGTCCTCCTCTGTGCTTaGCGGTGTCCGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQVLLCA*RCPCPG
Trigger: CCCGGGGCACGGACACCGCCAAGCACAGAGGAGGAC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGTCCTCCTCTGTGCTTaGCGGTGTCCGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPVLLCA*RCPCPG
Trigger: CCCGGGGCACGGACACCGCCAAGCACAGAGGAGGAC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGTGGAGCCAGGCTTGGTaGGGGACCCCTGAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKWSQAW*GTPESP
Trigger: CGGGCTCTCAGGGGTCCCCCACCAAGCCTGGCTCCA...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATAGCCAGGACCTCAGGTaGGCAGAGGACGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHSQDLR*AEDGFR
Trigger: TCTGAAGCCGTCCTCTGCCCACCTGAGGTCCTGGCT...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCTACAGGGCCAGGGATaGCCCAGAGGATCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRLQGQG*PRGSQA
Trigger: GGCTTGGGATCCTCTGGGCCATCCCTGGCCCTGTAG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCGCCAGCCCGCCTTGGTaGCAGGTGCATTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPASPPW*QVHWGS
Trigger: GGAACCCCAATGCACCTGTCACCAAGGCGGGCTGGC...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCCCGGCTGATGTTGTCTaGGGGCTGCACTGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTAPADVV*GLHCGY
Trigger: GTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGG...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCCGGAGGCTCTTTCTTaGCTTCTGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRPEALS*LLASQA
Trigger: GGCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTGCCACGGAGCTGTAGGTGGCTaGGGGGCCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PALPKNMPLPKAGEQVCHGAVGG*GAKSSS
Trigger: AGAGGAGGACTTGGCCCCTCAGCCACCTACAGCTCC...GTGGCACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGGTGGGCACAAGGCTaGTGTCTCTGGGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRWWAQG*CLWGCP
Trigger: TGGACACCCCCAGAGACATCAGCCTTGTGCCCACCA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCCGGCTTTGCGGGCTGTaGGAGTTGCCCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGRLCGL*ELPGRW
Trigger: CCAGCGTCCGGGCAACTCGCACAGCCCGCAAAGCCG...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGAGACGGGAAAGCTGTaGTCCCTGGCCGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKETGKL*SLAGLG
Trigger: CCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCAGCTCGGAGCTGCTaGACCAGCCGGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPSARSC*TSRSCS
Trigger: GGAGCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGCTTGGCGGTGTCCGTaGCCCGGGAGGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEAWRCP*PGRGCS
Trigger: AGAACAACCCCTCCCGGGGCACGGACACCGCCAAGC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGGGCTGGCCGGGAGCTaGAGGCTCCTCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFGLAGS*RLLRFS
Trigger: GGAGAAGCGGAGGAGCCTGCAGCTCCCGGCCAGCCC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCGGGCTGGCCGGGAGCTaGAGGCTCCTCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGGLAGS*RLLRFS
Trigger: GGAGAAGCGGAGGAGCCTGCAGCTCCCGGCCAGCCC...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACAGCATGCGGCCCCTaGGGGAGGCCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPTACGP*GRPRSP
Trigger: TGGCGACCGAGGCCTCCCGCAGGGGCCGCATGCTGT...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCCCGCATGGTATAGCTaGTGTCGGCGCCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHPAWYS*CRRPVG
Trigger: CCCCACGGGGCGCCGACAGCAGCTATACCATGCGGG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGTGGCTGTCTCGCCACTaGGGTGCCAGGAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQWLSRH*GARKGS
Trigger: GCTCCCCTTCCTGGCACCGCAGTGGCGAGACAGCCA...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCGGCTGGCAGGTCCCTaGCGCAGGGAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSRLAGP*RRERML
Trigger: CAGCATCCTCTCCCTGCGCCAGGGACCTGCCAGCCG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGAGTCATCTCTCCGGCTaGCAGGTCCCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKSHLSG*QVPGAG
Trigger: CCCTGCGCCAGGGACCTGCCAGCCGGAGAGATGACT...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGCCAGCTCAGGCCAGCTaGGGTCCTCCTCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRPAQAS*GPPPPP
Trigger: GGGCGGGGGAGGAGGACCCCAGCTGGCCTGAGCTGG...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGAGTTGCCCGGACGCTaGGCCGCTCTGGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRELPGR*AALEGP
Trigger: AGGTCCCTCCAGAGCGGCCCAGCGTCCGGGCAACTC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGAGTTGCCCGGACGCTaGGCCGCTCTGGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPELPGR*AALEGP
Trigger: AGGTCCCTCCAGAGCGGCCCAGCGTCCGGGCAACTC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGTGGGGTGGCTGCTGGTaGTGCTTGCTGGGTGGGACG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKWGGCW*CLLGGT
Trigger: CGTCCCACCCAGCAAGCACCACCAGCAGCCACCCCA...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAACCCCCTGGCACTCTTaGGCCCTCGGGGTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPTPWHS*ALGVRA
Trigger: AGCCCTTACCCCGAGGGCCCAAGAGTGCCAGGGGGT...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCTGTTCCCCACCCCCTaGCACTCTTGGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRLFPTP*HSWALG
Trigger: CCCGAGGGCCCAAGAGTGCCAGGGGGTGGGGAACAG...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCTGTTCCCCACCCCCTaGCACTCTTGGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHLFPTP*HSWALG
Trigger: CCCGAGGGCCCAAGAGTGCCAGGGGGTGGGGAACAG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGGAAAGCTGTGCTCCCTaGCCGGCTTGGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRESCAP*PAWGVV
Trigger: TACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTC...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGGTCAGGGTTGGTGCGTaGTGGGAAACTCCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWVRVGA*WETPPV
Trigger: CACCGGCGGAGTTTCCCACCACGCACCAACCCTGAC...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGATCATAGGCCGGCATaGAACAGATGCTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHDHRPA*NRCSPA
Trigger: GGCCGGAGAGCATCTGTTCCATGCCGGCCTATGATC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCTTGGGATCCAGACGGTaGCATCCTGCCGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTALGSRR*HPAARS
Trigger: GCTACGGGCGGCAGGATGCCACCGTCTGGATCCCAA...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGGCTGGCCGGGCTGTTaGAGCTGTAGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKGWPGC*SCRWLR
Trigger: CCTCAGCCACCTACAGCTCCAACAGCCCGGCCAGCC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGCACCACTTTGTAGGCTaGCCGGGGACTGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQHHFVG*PGTGVG
Trigger: CCCGACCCCAGTCCCCGGCCAGCCTACAAAGTGGTG...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCACGACAGGGGGTTTGCTaGAGGAGCCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPRQGVC*RSRGSR
Trigger: CCTGCTTCCCCGGCTCCTCCAGCAAACCCCCTGTCG...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGGCATGGTGGGTGTGTaGACACTGAGGTATCCACGG +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHGMVGV*TLRYPR
Trigger: CCGTGGATACCTCAGTGTCCACACACCCACCATGCC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCCCCTTACCCCAGGATaGCGAGGCAGACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGPLTPG*RGRHQA
Trigger: TGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGCCAGCCCGCCTTGGTaGCAGGTGCATTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAASPPW*QVHWGS
Trigger: GGAACCCCAATGCACCTGTCACCAAGGCGGGCTGGC...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCGGAGCTGGCCTGTTTaGAGAGCCAGCCCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHRSWPV*RASPPW
Trigger: CCAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTCCG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCACAGCTTGGGGCACTaGCTTCTGGGCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGHSLGH*LLGWRD
Trigger: ATCCCTCCAGCCCAGAAGTCAGTGCCCCAAGCTGTG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGCCGGAGGCTCTTTCTTaGCTTCTGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWPEALS*LLASQA
Trigger: GGCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGG...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGGAGCTGTAGGTGGCTaGGGGGCCAAGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQGAVGG*GAKSSS
Trigger: AGAGGAGGACTTGGCCCCTCAGCCACCTACAGCTCC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTGCCACCCTCCACGCTCATCTTaGCCTTCCCCTCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PALPKNMPLPKAGEQVCHPPRSS*PSPRQE
Trigger: TTCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGG...GTGGCACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGATGGAGGGACTTGCATaGAGAGTTGGGACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRMEGLA*RVGTWG
Trigger: CCCCCAGGTCCCAACTCTTCATGCAAGTCCCTCCAT...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR GCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCAGCGCTTGTTCCACTaGTTAACCCCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGQRLFH*LTPELA
Trigger: GGCCAGCTCCGGGGTTAAGCAGTGGAACAAGCGCTG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGCAGCGCTTGTTCCACTaGTTAACCCCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWQRLFH*LTPELA
Trigger: GGCCAGCTCCGGGGTTAAGCAGTGGAACAAGCGCTG...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGGCTGCTGGTGGTGCTTaGTGGGTGGGACGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAAAGGA*WVGRSP
Trigger: CGGAGAACGTCCCACCCAGCAAGCACCACCAGCAGC...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCTGTTGTGGGGTGGCTaGTGGTGGTGCTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGLLWGG*WWCLLG
Trigger: ACCCAGCAAGCACCACCAGCAGCCACCCCACAACAG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGAGACGGGAAAGCTGTaGTCCCTGGCCGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRETGKL*SLAGLG
Trigger: CCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGCCGGCATGGAACAGATaGTCTCCGGCCGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKPAWNR*SPAALL
Trigger: CAGGAGTGCGGCCGGAGAGCATCTGTTCCATGCCGG...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCAGGGCCACCCCCATTaGGGAAGGCATGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRQGHPH*GRHGAC
Trigger: ACAAGCGCCATGCCTTCCGCAATGGGGGTGGCCCTG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCAGGGCCACCCCCATTaGGGAAGGCATGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAQGHPH*GRHGAC
Trigger: ACAAGCGCCATGCCTTCCGCAATGGGGGTGGCCCTG...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGCCAAGTCCTCCTCTGTaGTTGGCGGTGTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQPSPPL*LAVSVP
Trigger: GGGCACGGACACCGCCAAGCACAGAGGAGGACTTGG...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGATTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQIAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAAT...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGAGACGACAGGGGGTTTaGTGGAGGAGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRRRQGV*WRSRGS
Trigger: GCTTCCCCGGCTCCTCCAGCAAACCCCCTGTCGTCT...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGAGACGACAGGGGGTTTaGTGGAGGAGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQRRQGV*WRSRGS
Trigger: GCTTCCCCGGCTCCTCCAGCAAACCCCCTGTCGTCT...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTCCCGCATGGTATAGCTaGTGTCGGCGCCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRPAWYS*CRRPVG
Trigger: CCCCACGGGGCGCCGACAGCAGCTATACCATGCGGG...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGCCTCAGCCAGGGCTTaGAGTCAGAGCTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQASARA*SQSSDP
Trigger: CGGGTCTGAGCTCTGACTGCAAGCCCTGGCTGAGGC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGACACTGCACAGACCTaGTGTTCTCTAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHDTAQT*CSLATA
Trigger: GGCTGTGGCTAGAGAACAGCAGGTCTGTGCAGTGTC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACTCTGTCTTCCCCGCTaGCCTCCCGGGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASLCLPR*PPGAGG
Trigger: TCCACCTGCCCCGGGAGGGCAGCGGGGAAGACAGAG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTCTCTGTCTTCCCCGCTaGCCTCCCGGGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRLCLPR*PPGAGG
Trigger: TCCACCTGCCCCGGGAGGGCAGCGGGGAAGACAGAG...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCTGCCCCCGGCAAGATaGTTTCTGGGTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGLPPAR*FLGELW
Trigger: CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGCTGGCTTAGTTCGGTaGCCCAGTGGCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEAGLVR*PSGSLL
Trigger: CAGCAGGCTGCCACTGGGGCACCGAACTAAGCCAGC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGGCTGGCCAGGAGCTCTaGTCTAGATTCCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRAGQEL*SRFPSP
Trigger: AGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGC...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTAGTCATCTCTCCGGCTaGCAGGTCCCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPSHLSG*QVPGAG
Trigger: CCCTGCGCCAGGGACCTGCCAGCCGGAGAGATGACT...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTACCAGCTCAGGCCAGCTaGGGTCCTCCTCCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVPAQAS*GPPPPP
Trigger: GGGCGGGGGAGGAGGACCCCAGCTGGCCTGAGCTGG...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGCCTCCCCCATGGCCTaGATCCAGGCCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRASPMA*IQASCS
Trigger: GGAGCAAGAGGCCTGGATCCAGGCCATGGGGGAGGC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTGCCAGCCATTGGGCTaGGCAGGCTGTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSCQPLG*AGCSPP
Trigger: GGGTGGGGAACAGCCTGCCCAGCCCAATGGCTGGCA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGGTACTGCCAGCCATTaGGCTGGGCAGGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKGTASH*AGQAVP
Trigger: GGGAACAGCCTGCCCAGCCCAATGGCTGGCAGTACC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGTCCTCACTGCGAGGTaGCAGCCGCTCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKVLTAR*QPLKTG
Trigger: GCCCGTTTTGAGCGGCTGCCACCTCGCAGTGAGGAC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGTCCTCACTGCGAGGTaGCAGCCGCTCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQVLTAR*QPLKTG
Trigger: GCCCGTTTTGAGCGGCTGCCACCTCGCAGTGAGGAC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATAACATCTCCAGCTCCTaGTGGGTCCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHNISSS*WVPIKA
Trigger: TGCCTTGATGGGGACCCACCAGGAGCTGGAGATGTT...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGGTGTCGCAGCTTTTCTaGGTAGGCGGGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGVSQLF*VGGLAS
Trigger: GGAAGCCAGCCCGCCTACCCAGAAAAGCTGCGACAC...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCGTTGGAGCCAGGCTTaGTGGGGGACCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSRWSQA*WGTPES
Trigger: GCTCTCAGGGGTCCCCCACCAAGCCTGGCTCCAACG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACCACTTTGTAGGCTaGCCGGGGACTGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRHHFVG*PGTGVG
Trigger: CCCGACCCCAGTCCCCGGCCAGCCTACAAAGTGGTG...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGGAGATGTCTACCTCATaGATGCTGCGGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWEMSTS*MLRWRR
Trigger: GCGCCGCCACCGCAGCATCCATGAGGTAGACATCTC...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGAGTCCCCCTCGCCGATaGGCACCACGTTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGSPPRR*APRSAY
Trigger: GTATGCAGAACGTGGTGCCCATCGGCGAGGGGGACT...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCTGTCGGCGCCCCGTaGGGATTCAGACGACAGGGG +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASAVGAP*GFRRQG
Trigger: CCCCTGTCGTCTGAATCCCCACGGGGCGCCGACAGC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGGTATCCACGGTCCTCTaGCAGCAGCCCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAVSTVL*QQPMAP
Trigger: TGGGGCCATGGGCTGCTGCCAGAGGACCGTGGATAC...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATCAGGGAATGTTCCACTaGAGTCACCACAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHQGMFH*SHHNPS
Trigger: GCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTG...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACGAGTGGAGGGACGGCTaGAGGAGACTCCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHEWRDG*RRLQGD
Trigger: GTCCCCCTGGAGTCTCCTCCAGCCGTCCCTCCACTC...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCTTGGGCTGCCCCCTaGCTGTCTCGCCACTGCGGT +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQPWAAP*LSRHCG
Trigger: ACCGCAGTGGCGAGACAGCCAGGGGGCAGCCCAAGG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTCATTGTGGCGGCTTCTaGGGTGTGATCCCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAHCGGF*GVIPAL
Trigger: CAGCGCGGGGATCACACCTCAGAAGCCGCCACAATG...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCACCGCTTCATGGAGTGTaGGCGCTTGCCAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPPLHGV*ALAKGD
Trigger: GTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGG...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCCGGCTGATGTTGTCTaGGGGCTGCACTGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSPADVV*GLHCGY
Trigger: GTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACCC +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRRGSRH*RSRCGP
Trigger: GGGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCG...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGCCAGTCTCTCCATCCTaGGACGGGAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWPVSPS*DGKAVL
Trigger: GAGCACAGCTTTCCCGTCTCAGGATGGAGAGACTGG...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCAGGGCCGTGGTCGCCTaGGACAGCTCCACGCGGATG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVRAVVA*DSSTRM
Trigger: CATCCGCGTGGAGCTGTCTCAGGCGACCACGGCCCT...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTTGGTGGGGGACCCCTaGGAGCCCGACACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHLVGDP*EPDTSE
Trigger: TTCACTGGTGTCGGGCTCTCAGGGGTCCCCCACCAA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCCCCAGGACCACGGTGTaGGTAGTGATGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTPRTTV*VVMAPG
Trigger: CCCTGGAGCCATCACTACTCACACCGTGGTCCTGGG...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATCATACTTGGGGGAGCTaGTGGATCGCCTCATCACAT +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHHTWGS*WIASSH
Trigger: ATGTGATGAGGCGATCCATCAGCTCCCCCAAGTATG...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR GCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTCAAAGGCGACGGCTTTaGGGGCTGTGCGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPQRRRL*GLCELP
Trigger: GGGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTG...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGTGGAGTGTGAGCGCTTaGCAAAGGCGACGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWWSVSA*QRRRLC
Trigger: GCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCA...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGGCTTCTCATGGCTGTaGCGCACAGCTTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQGFSWL*RTAWGT
Trigger: AGTGCCCCAAGCTGTGCGGCACAGCCATGAGAAGCC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGGCTTCTCATGGCTGTaGCGCACAGCTTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKGFSWL*RTAWGT
Trigger: AGTGCCCCAAGCTGTGCGGCACAGCCATGAGAAGCC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGCTGCTGGTGGTGCTTaGTGGGTGGGACGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRAAGGA*WVGRSP
Trigger: CGGAGAACGTCCCACCCAGCAAGCACCACCAGCAGC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCCGGCATGGAACAGATaGTCTCCGGCCGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSPAWNR*SPAALL
Trigger: CAGGAGTGCGGCCGGAGAGCATCTGTTCCATGCCGG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCGGACAGGGGAGTAAATaGGGGCACGGCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPGQGSK*GHGCRS
Trigger: GCTCCTACAGCCGTGCCCGCATTTACTCCCCTGTCC...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCTTCTCAGCTCGGAGCTaGTGCACCAGCCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGFSARS*CTSRSC
Trigger: GCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGAGAA...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCGCTTGGCGGTGTCCGTaGCCCGGGAGGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPAWRCP*PGRGCS
Trigger: AGAACAACCCCTCCCGGGGCACGGACACCGCCAAGC...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGATGGAGCCACTCTGGTaGCGCCGCATTCGGTCAATC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWMEPLW*RRIRSI
Trigger: GATTGACCGAATGCGGCGGCACCAGAGTGGCTCCAT...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGCTACCTCATGGATGCTaGGGTGGCGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQLPHGC*GGGAPL
Trigger: AAGTGGTGCGCCGCCACCGCAGCATCCATGAGGTAG...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCACTACCTCATGGATGCTaGGGTGGCGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPLPHGC*GGGAPL
Trigger: AAGTGGTGCGCCGCCACCGCAGCATCCATGAGGTAG...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTACAGCATGCGGCCCCTaGGGGAGGCCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASTACGP*GRPRSP
Trigger: TGGCGACCGAGGCCTCCCGCAGGGGCCGCATGCTGT...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCACAGCATGCGGCCCCTaGGGGAGGCCTCGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLTACGP*GRPRSP
Trigger: TGGCGACCGAGGCCTCCCGCAGGGGCCGCATGCTGT...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCAGACGACAGGGGGTTTaGTGGAGGAGCCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGRRQGV*WRSRGS
Trigger: GCTTCCCCGGCTCCTCCAGCAAACCCCCTGTCGTCT...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCCTCAGCCAGGGCTTaGAGTCAGAGCTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSASARA*SQSSDP
Trigger: CGGGTCTGAGCTCTGACTGCAAGCCCTGGCTGAGGC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGGGTATGGAGGGACTTaGATGAAGAGTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHGYGGT*MKSWDL
Trigger: CAGGTCCCAACTCTTCATGCAAGTCCCTCCATACCC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTCTGTGCCGCACAGCTTaGGGCACTGACTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCLCRTA*GTDFWA
Trigger: AGCCCAGAAGTCAGTGCCCCAAGCTGTGCGGCACAG...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCACTGTGCCGCACAGCTTaGGGCACTGACTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPLCRTA*GTDFWA
Trigger: AGCCCAGAAGTCAGTGCCCCAAGCTGTGCGGCACAG...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGCTGGTGGTGCTTGCTaGGTGGGACGTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKAGGAC*VGRSPS
Trigger: ACTCGGAGAACGTCCCACCCAGCAAGCACCACCAGC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGCTGGTGGTGCTTGCTaGGTGGGACGTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPAGGAC*VGRSPS
Trigger: ACTCGGAGAACGTCCCACCCAGCAAGCACCACCAGC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTGGCTCCGGTCCAGCTaGGAGGCCATTGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPWLRSS*EAIGFH
Trigger: GTGAAAGCCAATGGCCTCCCAGCTGGACCGGAGCCA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGACCCCCTGGCACTCTTaGGCCCTCGGGGTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQTPWHS*ALGVRA
Trigger: AGCCCTTACCCCGAGGGCCCAAGAGTGCCAGGGGGT...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGTGCCAGCCATTGGGCTaGGCAGGCTGTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQCQPLG*AGCSPP
Trigger: GGGTGGGGAACAGCCTGCCCAGCCCAATGGCTGGCA...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCTGCCAGCCATTGGGCTaGGCAGGCTGTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPCQPLG*AGCSPP
Trigger: GGGTGGGGAACAGCCTGCCCAGCCCAATGGCTGGCA...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGGTACTGCCAGCCATTaGGCTGGGCAGGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPGTASH*AGQAVP
Trigger: GGGAACAGCCTGCCCAGCCCAATGGCTGGCAGTACC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGGCCGGCTTGGGGAGTaGTACTGCCAGCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQGRLGE*YCQPLG
Trigger: GCCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCC...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGCTCCCTGGCCGGCTTaGGGAGTGGTACTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPAPWPA*GVVLPA
Trigger: GGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTAGGGTTGGTGCGTGGTaGGAAACTCCGCCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEARVGAW*ETPPVS
Trigger: GGACACCGGCGGAGTTTCCCACCACGCACCAACCCT...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCCATTGCGGAAGGCATaGCGCTTGTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRPLRKA*RLSSRA
Trigger: GGCCCTGGAGGACAAGCGCCATGCCTTCCGCAATGG...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCCATTGCGGAAGGCATaGCGCTTGTCCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSPLRKA*RLSSRA
Trigger: GGCCCTGGAGGACAAGCGCCATGCCTTCCGCAATGG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCTGCCGGGAGGGGCTTaGGATCCAGACGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGLPGGA*DPDGGI
Trigger: GATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGGCTCAAAACGGGCACTaGGTGAGCGGACAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAAQNGH*VSGQGS
Trigger: ACTCCCCTGTCCGCTCACCCAGTGCCCGTTTTGAGC...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCGTCCTCCTCTGTGCTTaGCGGTGTCCGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAVLLCA*RCPCPG
Trigger: CCCGGGGCACGGACACCGCCAAGCACAGAGGAGGAC...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGGCTGGCCGGGCTGTTaGAGCTGTAGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQGWPGC*SCRWLR
Trigger: CCTCAGCCACCTACAGCTCCAACAGCCCGGCCAGCC...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCCTCTTGGGGCGTTCCTaGGAGGAGAGTCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTALLGRS*EESPLV
Trigger: CACCAATGGACTCTCCTCCCAGGAACGCCCCAAGAG...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCACCACTTTGTAGGCTaGCCGGGGACTGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFHHFVG*PGTGVG
Trigger: CCCGACCCCAGTCCCCGGCCAGCCTACAAAGTGGTG...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGAGATGTCTACCTCATaGATGCTGCGGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQEMSTS*MLRWRR
Trigger: GCGCCGCCACCGCAGCATCCATGAGGTAGACATCTC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCAGTCCCCCTCGCCGATaGGCACCACGTTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPSPPRR*APRSAY
Trigger: GTATGCAGAACGTGGTGCCCATCGGCGAGGGGGACT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTGGCTCTCTGAGTCCTaGGGCACGTCCACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPWLSES*GTSTES
Trigger: GGACTCTGTGGACGTGCCCCAGGACTCAGAGAGCCA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCATGGCTCTCTGAGTCCTaGGGCACGTCCACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPWLSES*GTSTES
Trigger: GGACTCTGTGGACGTGCCCCAGGACTCAGAGAGCCA...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGAGCCAGGACCTCAGGTaGGCAGAGGACGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRSQDLR*AEDGFR
Trigger: TCTGAAGCCGTCCTCTGCCCACCTGAGGTCCTGGCT...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGTATCCACGGTCCTCTaGCAGCAGCCCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSVSTVL*QQPMAP
Trigger: TGGGGCCATGGGCTGCTGCCAGAGGACCGTGGATAC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCTCCTTGGTGTCAGGCTaGCTCCAGAGGCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTASLVSG*LQRQCP
Trigger: TGGACACTGCCTCTGGAGCCAGCCTGACACCAAGGA...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGTTGGCTCAAGCAGGGTaGTCAGTCTCCACCGGACCC +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSELAQAG*SVSTGP
Trigger: GGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAA...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGTTGGCTCAAGCAGGGTaGTCAGTCTCCACCGGACCC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRLAQAG*SVSTGP
Trigger: GGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAA...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCAGCCAGTCCTCGTCTaGGATGCCTGGGATAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSQPVLV*DAWDRG
Trigger: CCCCCTATCCCAGGCATCCCAGACGAGGACTGGCTG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCCCCTCCCGGGGCAGGTaGATCATGAGAGCGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPPSRGR*IMRAPS
Trigger: GCTAGGCGCTCTCATGATCCACCTGCCCCGGGAGGG...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGGCAGCGTGTGGAGCTaGCCTCGGCCTCATCCACCC +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVGSVWS*PRPHPP
Trigger: GGGTGGATGAGGCCGAGGCCAGCTCCACACGCTGCC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS-3UTR CCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCGCTCTCGCTAGGGAGTaGAGGGACGGCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGALARE*RDGWRR
Trigger: TCTCCTCCAGCCGTCCCTCCACTCCCTAGCGAGAGC...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCGCGGCTTCTGAGGTGTaGTCCCCGCGCTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPAASEV*SPRWKA
Trigger: AGCTTTCCAGCGCGGGGATCACACCTCAGAAGCCGC...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR TCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCCCGGCTGATGTTGTCTaGGGGCTGCACTGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPPADVV*GLHCGY
Trigger: GTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGG...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCCACAGCTTGGGGCACTaGCTTCTGGGCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTHSLGH*LLGWRD
Trigger: ATCCCTCCAGCCCAGAAGTCAGTGCCCCAAGCTGTG...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTCACAGCTTGGGGCACTaGCTTCTGGGCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPHSLGH*LLGWRD
Trigger: ATCCCTCCAGCCCAGAAGTCAGTGCCCCAAGCTGTG...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCCAGTCTCTCCATCCTaGGACGGGAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRPVSPS*DGKAVL
Trigger: GAGCACAGCTTTCCCGTCTCAGGATGGAGAGACTGG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCAAAACGGGCACTGGGTaGGCGGACAGGGGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTAKTGTG*ADRGVN
Trigger: ATTTACTCCCCTGTCCGCTCACCCAGTGCCCGTTTT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTCTGGGTGTCCAAATTaGGCTGCTCCCAGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRSGCPN*AAPRGH
Trigger: ATGACCTCTGGGAGCAGCTCAATTTGGACACCCAGA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCAGAGCCCGACACCAGTaGAAAGGGGCTCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFRARHQ*KGAQGA
Trigger: AGCCCCCTGAGCCCCTTTTCACTGGTGTCGGGCTCT...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCAGAGCCCGACACCAGTaGAAAGGGGCTCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGRARHQ*KGAQGA
Trigger: AGCCCCCTGAGCCCCTTTTCACTGGTGTCGGGCTCT...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCTTGGTGGGGGACCCCTaGGAGCCCGACACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPLVGDP*EPDTSE
Trigger: TTCACTGGTGTCGGGCTCTCAGGGGTCCCCCACCAA...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCAACGCCAACTTTGTTaGGAGCTGCCTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRQRQLC*ELPASL
Trigger: CAGAGAAGCAGGCAGCTCTCAACAAAGTTGGCGTTG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGAGGAGAGTCCATTGGTaGGCCCACTGGCATTCCTTC +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGRRVHW*AHWHSF
Trigger: GAAGGAATGCCAGTGGGCTCACCAATGGACTCTCCT...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGTGGGTGTGTGGACACTaGGGTATCCACGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQWVCGH*GIHGPL
Trigger: CAGAGGACCGTGGATACCTCAGTGTCCACACACCCA...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCCAGGACCACGGTGTaGGTAGTGATGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQPRTTV*VVMAPG
Trigger: CCCTGGAGCCATCACTACTCACACCGTGGTCCTGGG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCCCCTCCTTCCACTCTaGGGATCTCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGPLLPL*GSLSLS
Trigger: AGAGAGAGAGAGAGATCCTCAGAGTGGAAGGAGGGG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGGGGCAGGTGGATCATaGGAGCGCCTAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPGAGGS*ERLASA
Trigger: GGCTGAGGCTAGGCGCTCTCATGATCCACCTGCCCC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGGGGCAGGTGGATCATaGGAGCGCCTAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRGAGGS*ERLASA
Trigger: GGCTGAGGCTAGGCGCTCTCATGATCCACCTGCCCC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGCCAGGTGGGTGGAGCTaGGGAGGAATGCGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKPGGWS*GGMRLL
Trigger: AAGCAAACGCATTCCTCCTCAGCTCCACCCACCTGG...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGCGGCTTTGCGGGCTGTaGGAGTTGCCCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERRLCGL*ELPGRW
Trigger: CCAGCGTCCGGGCAACTCGCACAGCCCGCAAAGCCG...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTGGAGTGTGAGCGCTTaGCAAAGGCGACGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPWSVSA*QRRRLC
Trigger: GCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCGCCTTGGTGACAGGTaGATTGGGGTTCCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGRLGDR*IGVPLH
Trigger: ATGAAGCGGAACCCCAATGCACCTGTCACCAAGGCG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCAGCGCTTGTTCCACTaGTTAACCCCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHQRLFH*LTPELA
Trigger: GGCCAGCTCCGGGGTTAAGCAGTGGAACAAGCGCTG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGTCAGGAGGGGGATGCTaGCCAGGATACTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWSGGGC*PGYSLP
Trigger: AGGAAGAGAGTATCCTGGGCAGCATCCCCCTCCTGA...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGATGTTGTCTGAGGGCTaGACTGCGGCTACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAMLSEG*TAATRK
Trigger: CTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACAT...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGTGCGGACCCCGGCATaGTCAGCCTTAAACGTGTGT +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKVRTPA*SALNVC
Trigger: ACACACGTTTAAGGCTGAGCATGCCGGGGTCCGCAC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGGCTTCTCATGGCTGTaGCGCACAGCTTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAGFSWL*RTAWGT
Trigger: AGTGCCCCAAGCTGTGCGGCACAGCCATGAGAAGCC...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGAGACGGGAAAGCTGTaGTCCCTGGCCGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVETGKL*SLAGLG
Trigger: CCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCGGCATGGAACAGATaGTCTCCGGCCGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQPAWNR*SPAALL
Trigger: CAGGAGTGCGGCCGGAGAGCATCTGTTCCATGCCGG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCAGGGCCACCCCCATTaGGGAAGGCATGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFQGHPH*GRHGAC
Trigger: ACAAGCGCCATGCCTTCCGCAATGGGGGTGGCCCTG...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTGCACCAGCCGGTCCTaGTCCCTCACCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSCTSRS*SLTTLF
Trigger: GAACAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCCCAAGTCCTCCTCTGTaGTTGGCGGTGTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPPSPPL*LAVSVP
Trigger: GGGCACGGACACCGCCAAGCACAGAGGAGGACTTGG...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACTCTGCCCGCAGGGCTaGCTCCAGGTTGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASLCPQG*LQVGDV
Trigger: GACATCTCCAACCTGGAGGCAGCCCTGCGGGCAGAG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGCTCTAGCTCCATTTTaGGAAGCCGGGCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHALAPF*EAGQFP
Trigger: AGGAAATTGCCCGGCTTCGCAAAATGGAGCTAGAGC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCGACACTGCACAGACCTaGTGTTCTCTAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTADTAQT*CSLATA
Trigger: GGCTGTGGCTAGAGAACAGCAGGTCTGTGCAGTGTC...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCTTGCCAATGTGTCCTaGTGCTTCCCCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGLANVS*CFPLLP
Trigger: TGGAAGGAGGGGGAAGCAGCAGGACACATTGGCAAG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGACAAGTCCTTCTCTCTaGCCCTTACCCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGTSPSL*PLPQDG
Trigger: GCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGT...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGGAGCCAATCCCACCTaGCAGTCTGCAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQGANPT*QSAGEK
Trigger: TTTCTCCCCTGCAGACTGGCAGGTGGGATTGGCTCC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTGCCCCAGTGGCAGCCTaGTGGGGTAAAGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASAPVAA*WGKVPG
Trigger: CCCCGGGACTTTACCCCAGCAGGCTGCCACTGGGGC...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCCCTGCCCAAGAACATaGCTCTCCCAAAGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHPCPRT*LSQRPE
Trigger: CTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGTAGGGGAACAGTCCTaGAGGGACTGGCCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASVGEQS*RDWPPV
Trigger: GACAGGCGGCCAGTCCCTGCAGGACTGTTCCCCTAC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTGTCTCGCCACTGCGGTaGCAGGAAGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASVSPLR*QEGELG
Trigger: CCCCAGCTCCCCTTCCTGGCACCGCAGTGGCGAGAC...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGACGGCTGGCAGGTCCCTaGCGCAGGGAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TLARSSALDSQALDFRPRRLAGP*RRERML
Trigger: CAGCATCCTCTCCCTGCGCCAGGGACCTGCCAGCCG...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCGACGCTGGGCCGCTCTaGAGGGACCTCGGACACCAT +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSADAGPL*RDLGHH
Trigger: ATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAGCGTC...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCTGGTGGTGCTTGCTaGGTGGGACGTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSAGGAC*VGRSPS
Trigger: ACTCGGAGAACGTCCCACCCAGCAAGCACCACCAGC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCTGGGGTGGCTGCTGGTaGTGCTTGCTGGGTGGGACG +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAWGGCW*CLLGGT
Trigger: CGTCCCACCCAGCAAGCACCACCAGCAGCCACCCCA...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCTGGGGTGGCTGCTGGTaGTGCTTGCTGGGTGGGACG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVWGGCW*CLLGGT
Trigger: CGTCCCACCCAGCAAGCACCACCAGCAGCCACCCCA...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCGAGTCTTGGCCTCTaGCTCAGGCTTAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPSSLGL*LRLREA
Trigger: AGCCTCCCTAAGCCTGAGCCAGAGGCCAAGACTCGA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGCAGCTGGGAGGCCATTaGCTTTCACCGGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKQLGGH*LSPEAL
Trigger: AAGAGCCTCCGGTGAAAGCCAATGGCCTCCCAGCTG...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTGGCTCCGGTCCAGCTaGGAGGCCATTGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSWLRSS*EAIGFH
Trigger: GTGAAAGCCAATGGCCTCCCAGCTGGACCGGAGCCA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGGTACTGCCAGCCATTaGGCTGGGCAGGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFGTASH*AGQAVP
Trigger: GGGAACAGCCTGCCCAGCCCAATGGCTGGCAGTACC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACGAAAGCTGTGCTCCCTaGCCGGCTTGGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHESCAP*PAWGVV
Trigger: TACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTC...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCAGGGTTGGTGCGTGGTaGGAAACTCCGCCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPRVGAW*ETPPVS
Trigger: GGACACCGGCGGAGTTTCCCACCACGCACCAACCCT...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCTCCGGCCGCACTCCTaGCGGGTAGTACTGATAATC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRLRPHS*RVVLII
Trigger: GATTATCAGTACTACCCGCCAGGAGTGCGGCCGGAG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGCTCCGGCCGCACTCCTaGCGGGTAGTACTGATAATC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQLRPHS*RVVLII
Trigger: GATTATCAGTACTACCCGCCAGGAGTGCGGCCGGAG...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCCCTCCATCACGTCCTaGATCCTCCAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRPSITS*ILQISF
Trigger: AAAGGAGATCTGGAGGATCCAGGACGTGATGGAGGG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCATGTTGGAGCTGTAGGTaGCTGAGGGGCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPCWSCR*LRGQVL
Trigger: GAGGACTTGGCCCCTCAGCCACCTACAGCTCCAACA...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGGCTGGCCGGGCTGTTaGAGCTGTAGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPGWPGC*SCRWLR
Trigger: CCTCAGCCACCTACAGCTCCAACAGCCCGGCCAGCC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCGTTGGAGCCAGGCTTaGTGGGGGACCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSARWSQA*WGTPES
Trigger: GCTCTCAGGGGTCCCCCACCAAGCCTGGCTCCAACG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGGAAACACAGCACTCTTaGGGCGTTCCTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWETQHS*GVPGRR
Trigger: TCTCCTCCCAGGAACGCCCCAAGAGTGCTGTGTTTC...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTCTCATGGAGCCACTCTaGTGCCGCCGCATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPLMEPL*CRRIRS
Trigger: TGACCGAATGCGGCGGCACCAGAGTGGCTCCATGAG...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCTCATGGAGCCACTCTaGTGCCGCCGCATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHLMEPL*CRRIRS
Trigger: TGACCGAATGCGGCGGCACCAGAGTGGCTCCATGAG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGAGATGTCTACCTCATaGATGCTGCGGTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTREMSTS*MLRWRR
Trigger: GCGCCGCCACCGCAGCATCCATGAGGTAGACATCTC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGTATCCACGGTCCTCTaGCAGCAGCCCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQVSTVL*QQPMAP
Trigger: TGGGGCCATGGGCTGCTGCCAGAGGACCGTGGATAC...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCCAGGGAATGTTCCACTaGAGTCACCACAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTAQGMFH*SHHNPS
Trigger: GCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTG...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCCCCTTACCCCAGGATaGCGAGGCAGACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGPLTPG*RGRHQA
Trigger: TGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCCCCTCCCGGGGCAGGTaGATCATGAGAGCGCCTAGC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPPSRGR*IMRAPS
Trigger: GCTAGGCGCTCTCATGATCCACCTGCCCCGGGAGGG...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCAGAGAGGAAATGACCTaGGAGCCAATCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTAREEMT*EPIPPA
Trigger: GGCAGGTGGGATTGGCTCCCAGGTCATTTCCTCTCT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGTCCCGGGGGTTTCTTaGGTGAGGTTGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQVPGVS*VRLRCH
Trigger: GTGGCATCTCAACCTCACCCAAGAAACCCCCGGGAC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACCAGTGGCAGCCTGCTaGGGTAAAGTCCCGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASPVAAC*GKVPGV
Trigger: AACCCCCGGGACTTTACCCCAGCAGGCTGCCACTGG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCAGTTCGGTGCCCCAGTaGCAGCCTGCTGGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGSSVPQ*QPAGVK
Trigger: CTTTACCCCAGCAGGCTGCCACTGGGGCACCGAACT...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCTAAAGGGGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAAGGCCATCCCTCCTCCTaGGGAGGGGGCTCATTGGCT +
Preference number: 4 (lower is better)
Translates to: PKGERNWFPLAVASPAQEGHPSS*GGGSLA
Trigger: AGCCAATGAGCCCCCTCCCCAGGAGGAGGGATGGCC...TTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTATGTCAGGACCCAGCTaGGAGACGCAGACTGCCGAC +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPMSGPS*ETQTAD
Trigger: GTCGGCAGTCTGCGTCTCCCAGCTGGGTCCTGACAT...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGACGTGTGTTTCCGGCTaGTGTTGTCTGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPATCVSG*CCLRAA
Trigger: TGCAGCCCTCAGACAACATCAGCCGGAAACACACGT...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGACGTGTGTTTCCGGCTaGTGTTGTCTGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRTCVSG*CCLRAA
Trigger: TGCAGCCCTCAGACAACATCAGCCGGAAACACACGT...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCCAGTCTCTCCATCCTaGGACGGGAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRPVSPS*DGKAVL
Trigger: GAGCACAGCTTTCCCGTCTCAGGATGGAGAGACTGG...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGGACCTTGGGGGAGCTaGTGGATCGCCTCATCACAT +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRGPWGS*WIASSH
Trigger: ATGTGATGAGGCGATCCATCAGCTCCCCCAAGGTCC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR TCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCCCTCCACGCTCATCTTaGCCTTCCCCTCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPPPRSS*PSPRQE
Trigger: TTCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGG...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTCCTCCACGCTCATCTTaGCCTTCCCCTCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRPPRSS*PSPRQE
Trigger: TTCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGG...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGTGTACCGTTCAGGGATaGGGACTTTGTCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWCTVQG*GLCLEW
Trigger: CCACTCCAGACAAAGTCCTCATCCCTGAACGGTACA...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCTGTACCGTTCAGGGATaGGGACTTTGTCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTACTVQG*GLCLEW
Trigger: CCACTCCAGACAAAGTCCTCATCCCTGAACGGTACA...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTGGGTGTGTGGACACTaGGGTATCCACGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHWVCGH*GIHGPL
Trigger: CAGAGGACCGTGGATACCTCAGTGTCCACACACCCA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGTCCCTCCTTCCTGCTTaGCTTGCCAATGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRSLLPA*LANVSC
Trigger: GCAGGACACATTGGCAAGTCAAGCAGGAAGGAGGGA...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGAGAGAGAGAGGAAATaGCCTGGGAGCCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQERERK*PGSQSH
Trigger: GTGGGATTGGCTCCCAGGTCATTTCCTCTCTCTCTC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR TCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCAGAGGATTCACGCCTaGCAACCGCAGAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSQRIHA*QPQRVI
Trigger: GATGACCCTCTGCGGTTGTCAGGCGTGAATCCTCTG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCAGCAGCTTGGAAGGCTaGGCTGGCTTAGTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSSSLEG*AGLVRC
Trigger: GCACCGAACTAAGCCAGCTCAGCCTTCCAAGCTGCT...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGGCGCAGGGAGAGGATaGTGTTGTGGTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPGAGRG*CCGYCR
Trigger: CCTGCAGTAACCACAACAGCATCCTCTCCCTGCGCC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR GCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGGCGCAGGGAGAGGATaGTGTTGTGGTTACTGCAGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRGAGRG*CCGYCR
Trigger: CCTGCAGTAACCACAACAGCATCCTCTCCCTGCGCC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR GCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGCAAAGGCGACGGCTTTaGGGGCTGTGCGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRQRRRL*GLCELP
Trigger: GGGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTG...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTGGAGTGTGAGCGCTTaGCAAAGGCGACGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHWSVSA*QRRRLC
Trigger: GCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGTGCGGACCCCGGCATaGTCAGCCTTAAACGTGTGT +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRVRTPA*SALNVC
Trigger: ACACACGTTTAAGGCTGAGCATGCCGGGGTCCGCAC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGACAGGGGAGTAAATaGGGGCACGGCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASGQGSK*GHGCRS
Trigger: GCTCCTACAGCCGTGCCCGCATTTACTCCCCTGTCC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTGGACAGGGGAGTAAATaGGGGCACGGCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRGQGSK*GHGCRS
Trigger: GCTCCTACAGCCGTGCCCGCATTTACTCCCCTGTCC...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCATAGATGTCCTCACTaGGAGGTGGCAGCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRHRCPH*EVAAAQ
Trigger: TTGAGCGGCTGCCACCTCGCAGTGAGGACATCTATG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCATGCACCAGCCGGTCCTaGTCCCTCACCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASCTSRS*SLTTLF
Trigger: GAACAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCA...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTTGCACCAGCCGGTCCTaGTCCCTCACCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRCTSRS*SLTTLF
Trigger: GAACAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCA...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGACCTCAGACTCGAGGTaGTCATACTCTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRTSDSR*SYSMVL
Trigger: CAGCACCATAGAGTATGAGCACCTCGAGTCTGAGGT...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTCCCAGAGGTCATCGTaGAGGGCAGAGACCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSSQRSS*RAETSD
Trigger: GTCTGAGGTCTCTGCCCTGCACGATGACCTCTGGGA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCTCCCAGAGGTCATCGTaGAGGGCAGAGACCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGSQRSS*RAETSD
Trigger: GTCTGAGGTCTCTGCCCTGCACGATGACCTCTGGGA...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGCTTGGCGGTGTCCGTaGCCCGGGAGGGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLAWRCP*PGRGCS
Trigger: AGAACAACCCCTCCCGGGGCACGGACACCGCCAAGC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCCAAGTCCTCCTCTGTaGTTGGCGGTGTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAPSPPL*LAVSVP
Trigger: GGGCACGGACACCGCCAAGCACAGAGGAGGACTTGG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCTGCCTCTACCTCTTaGCTGGTGGGCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPSASTS*LVGTRL
Trigger: CAGCCTTGTGCCCACCAGGCAAGAGGTAGAGGCAGA...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTCTGCCTCTACCTCTTaGCTGGTGGGCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSSASTS*LVGTRL
Trigger: CAGCCTTGTGCCCACCAGGCAAGAGGTAGAGGCAGA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCCGCATTCGGTCAATCTaGTCCTCCACGCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTARIRSI*SSTLIL
Trigger: CAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCG...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCATGGAGCCACTCTGGTaGCGCCGCATTCGGTCAATC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSMEPLW*RRIRSI
Trigger: GATTGACCGAATGCGGCGGCACCAGAGTGGCTCCAT...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTACCTCATGGATGCTaGGGTGGCGGCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFLPHGC*GGGAPL
Trigger: AAGTGGTGCGCCGCCACCGCAGCATCCATGAGGTAG...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTGTCTACCTCATGGATaGTGCGGTGGCGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGCLPHG*CGGGAP
Trigger: TGGTGCGCCGCCACCGCAGCATCCATGAGGTAGACA...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGCTCTGCCCGCAGGGCTaGCTCCAGGTTGGAGATGTC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRLCPQG*LQVGDV
Trigger: GACATCTCCAACCTGGAGGCAGCCCTGCGGGCAGAG...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGTCAATCCGCTTCTCCTaGTCCTGCAGCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPASIRFS*SCSWLS
Trigger: AGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTGA...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGCCTGCCCTCAGACACTaGACAGACCTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKPALRH*TDLLFS
Trigger: AGAGAACAGCAGGTCTGTGCAGTGTCTGAGGGCAGG...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTACAAGTCCTTCTCTCTaGCCCTTACCCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCTSPSL*PLPQDG
Trigger: GCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGT...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCTGGGGTGCATGCCTaGATGGGTCTCCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPSGVHA*MGLLCA
Trigger: TGCACAAAGGAGACCCATGCAGGCATGCACCCCAGA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGTCCTGCCCAAATCCTTaGAAGGCCAGAGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWSCPNP*KARDPF
Trigger: GAAAGGGTCTCTGGCCTTGCAAGGATTTGGGCAGGA...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGTGGGGTTCCGCTTCATaGAGTGTGAGCGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRWGSAS*SVSACQ
Trigger: TTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCA...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGCCTCCCCCATGGCCTaGATCCAGGCCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLASPMA*IQASCS
Trigger: GGAGCAAGAGGCCTGGATCCAGGCCATGGGGGAGGC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTGGGGCACTGACTTCTaGGCTGGAGGGATCTGTACT +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPWGTDF*AGGICT
Trigger: AGTACAGATCCCTCCAGCCCAGAAGTCAGTGCCCCA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCTCGAGTCTTGGCCTCTaGCTCAGGCTTAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTSSLGL*LRLREA
Trigger: AGCCTCCCTAAGCCTGAGCCAGAGGCCAAGACTCGA...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTCAGCTGGGAGGCCATTaGCTTTCACCGGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPQLGGH*LSPEAL
Trigger: AAGAGCCTCCGGTGAAAGCCAATGGCCTCCCAGCTG...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGTGGCTCCGGTCCAGCTaGGAGGCCATTGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQWLRSS*EAIGFH
Trigger: GTGAAAGCCAATGGCCTCCCAGCTGGACCGGAGCCA...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTACCCCCTGGCACTCTTaGGCCCTCGGGGTAAGGGCT +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASTPWHS*ALGVRA
Trigger: AGCCCTTACCCCGAGGGCCCAAGAGTGCCAGGGGGT...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAGGCCGGCTTGGGGAGTaGTACTGCCAGCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVGRLGE*YCQPLG
Trigger: GCCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCC...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCTAAAGGGGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAAGTCAGGGTTGGTGCGTaGTGGGAAACTCCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: PKGERNWFPLAVASPAQEVRVGA*WETPPV
Trigger: CACCGGCGGAGTTTCCCACCACGCACCAACCCTGAC...TTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGTCAGGGTTGGTGCGTaGTGGGAAACTCCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVVRVGA*WETPPV
Trigger: CACCGGCGGAGTTTCCCACCACGCACCAACCCTGAC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGCTGAAGCTGGTTCATaGAGCTCTTGCGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPAEAGS*SSCAGQ
Trigger: TTGCCCAGCGCAAGAGCTCCATGAACCAGCTTCAGC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCTAAAGGGGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAATTGGGATCCAGACGGTaGCATCCTGCCGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: PKGERNWFPLAVASPAQELGSRR*HPAARS
Trigger: GCTACGGGCGGCAGGATGCCACCGTCTGGATCCCAA...TTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGACTGCCGGGAGGGGCTTaGGATCCAGACGGTGGCATC +
Preference number: 4 (lower is better)
Translates to: TLARSSALDSQALDFRPRLPGGA*DPDGGI
Trigger: GATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAG...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGCTCAAAACGGGCACTaGGTGAGCGGACAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQAQNGH*VSGQGS
Trigger: ACTCCCCTGTCCGCTCACCCAGTGCCCGTTTTGAGC...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTGTTTGTCAGGGCCGTaGTCGCCTGAGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSCLSGP*SPETAP
Trigger: TGGAGCTGTCTCAGGCGACCACGGCCCTGACAAACA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTGTTGGAGCTGTAGGTaGCTGAGGGGCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPCWSCR*LRGQVL
Trigger: GAGGACTTGGCCCCTCAGCCACCTACAGCTCCAACA...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTGTTGGAGCTGTAGGTaGCTGAGGGGCCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHCWSCR*LRGQVL
Trigger: GAGGACTTGGCCCCTCAGCCACCTACAGCTCCAACA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCGTTGGAGCCAGGCTTaGTGGGGGACCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLRWSQA*WGTPES
Trigger: GCTCTCAGGGGTCCCCCACCAAGCCTGGCTCCAACG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCGGGCTGCCTCCAGGTTaGAGATGTCTACCTCATGGA +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPGLPPG*RCLPHG
Trigger: TCCATGAGGTAGACATCTCCAACCTGGAGGCAGCCC...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCTGGCTCTCTGAGTCCTaGGGCACGTCCACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPWLSES*GTSTES
Trigger: GGACTCTGTGGACGTGCCCCAGGACTCAGAGAGCCA...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTGGGAGGGCTTGGGGTaGCACATTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSWEGLG*HIAQTA
Trigger: TGCTGTCTGTGCAATGTGCCACCCCAAGCCCTCCCA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGCGACAGGGGGTTTGCTaGAGGAGCCGGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERRQGVC*RSRGSR
Trigger: CCTGCTTCCCCGGCTCCTCCAGCAAACCCCCTGTCG...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGGCTGTCGGCGCCCCGTaGGGATTCAGACGACAGGGG +
Preference number: 4 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGAVGAP*GFRRQG
Trigger: CCCCTGTCGTCTGAATCCCCACGGGGCGCCGACAGC...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGAGCTCAGACCCGCATaGTATAGCTGCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFELRPA*YSCCRR
Trigger: GCGCCGACAGCAGCTATACCATGCGGGTCTGAGCTC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCTTGGCTCAAGCAGGGTaGTCAGTCTCCACCGGACCC +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFLAQAG*SVSTGP
Trigger: GGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAA...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCAGGCGTACTCTCAGCTaGCCCACTGCACATTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSRRTLS*PTAHSR
Trigger: CCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCT...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGATTAGTAGGTGTTCTTaGGACCGCTGGAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRISRCS*DRWKSG
Trigger: GCCTGACTTCCAGCGGTCCCAAGAACACCTACTAAT...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGAGTAAATGCCCCAGGTaGGAGGCCAGGCTTCAAACG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQSKCPR*EARLQT
Trigger: CGTTTGAAGCCTGGCCTCCCACCTGGGGCATTTACT...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCAGTCCTGCAGGGACTaGCCGCCTGTCTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVQSCRD*PPVSQV
Trigger: TACCTGGGAGACAGGCGGCCAGTCCCTGCAGGACTG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAGGCCAGGTTCCTCGTTaGAGCCAGGCTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVGQVPR*SQAWWG
Trigger: CCCCCACCAAGCCTGGCTCCAACGAGGAACCTGGCC...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTGGGCCCAGGGCGGGCTaGTCCGATCATAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSGPRAG*SDHRPA
Trigger: TGCCGGCCTATGATCGGATCAGCCCGCCCTGGGCCC...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGTCTGGGTGTCCAAATTaGGCTGCTCCCAGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSESGCPN*AAPRGH
Trigger: ATGACCTCTGGGAGCAGCTCAATTTGGACACCCAGA...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGCAACGCCAACTTTGTTaGGAGCTGCCTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKQRQLC*ELPASL
Trigger: CAGAGAAGCAGGCAGCTCTCAACAAAGTTGGCGTTG...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGGAGAGTCCATTGGTaGGCCCACTGGCATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHRRVHW*AHWHSF
Trigger: GAAGGAATGCCAGTGGGCTCACCAATGGACTCTCCT...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCCCAGGACCACGGTGTaGGTAGTGATGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASPRTTV*VVMAPG
Trigger: CCCTGGAGCCATCACTACTCACACCGTGGTCCTGGG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCCCCCTCCTTCCACTCTaGGGATCTCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGPLLPL*GSLSLS
Trigger: AGAGAGAGAGAGAGATCCTCAGAGTGGAAGGAGGGG...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCCCCTCCTTCCACTCTaGGGATCTCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSPLLPL*GSLSLS
Trigger: AGAGAGAGAGAGAGATCCTCAGAGTGGAAGGAGGGG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCCCAGGTGGGTGGAGCTaGGGAGGAATGCGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPPGGWS*GGMRLL
Trigger: AAGCAAACGCATTCCTCCTCAGCTCCACCCACCTGG...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGGACCAGCCCTTTCGTaGCTGGGGAATAGGATGGAA +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRGPALS*LGNRME
Trigger: TTCCATCCTATTCCCCAGTCACGAAAGGGCTGGTCC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCCTTGGCCCAGAGGCTaGTTTCACAGTCTGGATACC +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHPWPRG*FHSLDT
Trigger: GGTATCCAGACTGTGAAATCAGCCTCTGGGCCAAGG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTACAAAGGCGACGGCTTTaGGGGCTGTGCGAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVQRRRL*GLCELP
Trigger: GGGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTG...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCCGCCTTGGTGACAGGTaGATTGGGGTTCCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGRLGDR*IGVPLH
Trigger: ATGAAGCGGAACCCCAATGCACCTGTCACCAAGGCG...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCGCCTTGGTGACAGGTaGATTGGGGTTCCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHRLGDR*IGVPLH
Trigger: ATGAAGCGGAACCCCAATGCACCTGTCACCAAGGCG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCAGCTCAGGAGGGGGATaGTGCCCAGGATACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSSSGGG*CPGYSL
Trigger: AAGAGAGTATCCTGGGCAGCATCCCCCTCCTGAGCT...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAATGTTGTCTGAGGGCTaGACTGCGGCTACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASMLSEG*TAATRK
Trigger: CTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACAT...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAGCTGCTGGTGGTGCTTaGTGGGTGGGACGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVAAGGA*WVGRSP
Trigger: CGGAGAACGTCCCACCCAGCAAGCACCACCAGCAGC...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGCTGTTGTGGGGTGGCTaGTGGTGGTGCTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRLLWGG*WWCLLG
Trigger: ACCCAGCAAGCACCACCAGCAGCCACCCCACAACAG...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTATTCTCAGCTCGGAGCTaGTGCACCAGCCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVFSARS*CTSRSC
Trigger: GCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGAGAA...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTGCTCATACTCTATGGTaGTGTTTGTCAGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCAHTLW*CLSGPW
Trigger: CCACGGCCCTGACAAACAGCACCATAGAGTATGAGC...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCACCTCAGACTCGAGGTaGTCATACTCTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTATSDSR*SYSMVL
Trigger: CAGCACCATAGAGTATGAGCACCTCGAGTCTGAGGT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGTGTCCAAATTGAGCTaGTCCCAGAGGTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEVSKLS*SQRSSC
Trigger: GCACGATGACCTCTGGGAGCAGCTCAATTTGGACAC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCCCGCCAGGCTCCTCTaGCCGCAGGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCPARLL*PQGCLQ
Trigger: CTGGAGGCAGCCCTGCGGGCAGAGGAGCCTGGCGGG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTCAATCCGCTTCTCCTaGTCCTGCAGCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHSIRFS*SCSWLS
Trigger: AGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTGA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTATTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASIAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAAT...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAATTGCACAGACAGCATaGGGCCCCTGCGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVIAQTA*GPCGRP
Trigger: AGGCCTCCCGCAGGGGCCGCATGCTGTCTGTGCAAT...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCTTGGGGTGGCACATTaGACAGACAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVLGVAH*TDSMRP
Trigger: GGGCCGCATGCTGTCTGTGCAATGTGCCACCCCAAG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCAGGGATGATGACAAGTaGTGTCCTTGGTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTARDDDK*CPWCQA
Trigger: AGCCTGACACCAAGGACAGCACTTGTCATCATCCCT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCTACCCTTCCCAACCTaGCCTCAGACACTGCACAGA +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSLPFPT*PQTLHR
Trigger: TCTGTGCAGTGTCTGAGGGCAGGTTGGGAAGGGTAG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCTGTCTCTCTCTCTCTaGTACCCTTCCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSLSLSL*YPSQPA
Trigger: GGCAGGTTGGGAAGGGTAGCAGAGAGAGAGAGACAG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTCTCAGCTGGCCCACTaGACATTCCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGSQLAH*TFQGEQ
Trigger: CTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGA...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGTCTCAGCTGGCCCACTaGACATTCCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQSQLAH*TFQGEQ
Trigger: CTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGA...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGAGGGCAGGTTTGGGGTaGTTGAACTGTGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQRAGLG*LNCEDG
Trigger: CCCATCTTCACAGTTCAAGCACCCCAAACCTGCCCT...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGAGGGCAGGTTTGGGGTaGTTGAACTGTGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSERAGLG*LNCEDG
Trigger: CCCATCTTCACAGTTCAAGCACCCCAAACCTGCCCT...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCACTTGTATGTGTCTGTaGTACAGGGCCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPTCMCL*YRARDG
Trigger: GCCATCCCTGGCCCTGTAGCACAGACACATACAAGT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGAATTGGTTCCCTCTTaGCGTAGCCAGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFELVPS*RSQPCP
Trigger: TGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCTTTGTTCATAGTTTaGCTTGGGCTGCCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSALFIV*LGLPPG
Trigger: GCCAGGGGGCAGCCCAAGGCAAACTATGAACAAAGC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp ACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTGAGTTGCCCGGACGCTaGGCCGCTCTGGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: TLTSLVLFGIGCCYAVCSELPGR*AALEGP
Trigger: AGGTCCCTCCAGAGCGGCCCAGCGTCCGGGCAACTC...AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCTGGGGTTCCGCTTCATaGAGTGTGAGCGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSWGSAS*SVSACQ
Trigger: TTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCA...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTGGGGCACTGACTTCTaGGCTGGAGGGATCTGTACT +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHWGTDF*AGGICT
Trigger: AGTACAGATCCCTCCAGCCCAGAAGTCAGTGCCCCA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGTGGTGCTTGCTGGGTaGGACGTTCTCCGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPVVLAG*DVLRVW
Trigger: CCAGACTCGGAGAACGTCCCACCCAGCAAGCACCAC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGTGGTGCTTGCTGGGTaGGACGTTCTCCGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRVVLAG*DVLRVW
Trigger: CCAGACTCGGAGAACGTCCCACCCAGCAAGCACCAC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACGCTGAAGCTGGTTCATaGAGCTCTTGCGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHAEAGS*SSCAGQ
Trigger: TTGCCCAGCGCAAGAGCTCCATGAACCAGCTTCAGC...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGCTGAAGCTGGTTCATaGAGCTCTTGCGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRAEAGS*SSCAGQ
Trigger: TTGCCCAGCGCAAGAGCTCCATGAACCAGCTTCAGC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCCCTGCCGCCCGTAGCTaGCGGGCTCCTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: YTDILSAVWHRLLLRCLLPAARS*RAPSTL
Trigger: GAGAGTGGAAGGAGCCCGCCAGCTACGGGCGGCAGG...GAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTTGGGATCCAGACGGTaGCATCCTGCCGCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLLGSRR*HPAARS
Trigger: GCTACGGGCGGCAGGATGCCACCGTCTGGATCCCAA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCTCATCATAATAGACTaGCTGCCGGGAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRLIIID*LPGGAW
Trigger: CCAAGCCCCTCCCGGCAGCCAGTCTATTATGATGAG...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGCTCAAAACGGGCACTaGGTGAGCGGACAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPAQNGH*VSGQGS
Trigger: ACTCCCCTGTCCGCTCACCCAGTGCCCGTTTTGAGC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTGTCCTCACTGCGAGGTaGCAGCCGCTCAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASVLTAR*QPLKTG
Trigger: GCCCGTTTTGAGCGGCTGCCACCTCGCAGTGAGGAC...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGTGTCGCAGCTTTTCTaGGTAGGCGGGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPVSQLF*VGGLAS
Trigger: GGAAGCCAGCCCGCCTACCCAGAAAAGCTGCGACAC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGTGTCGCAGCTTTTCTaGGTAGGCGGGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRVSQLF*VGGLAS
Trigger: GGAAGCCAGCCCGCCTACCCAGAAAAGCTGCGACAC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCTGTTTGTCAGGGCCGTaGTCGCCTGAGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFCLSGP*SPETAP
Trigger: TGGAGCTGTCTCAGGCGACCACGGCCCTGACAAACA...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTTTGCCTTGGGCTCGTTaGAGCCAGGCTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASLPWAR*SQAWWG
Trigger: CCCCCACCAAGCCTGGCTCCAACGAGCCCAAGGCAA...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGAGGGGCAATGTCTGGTaGGGGTCTTTCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWRGNVW*GSFLLC
Trigger: ACAAAGCAAGAAAGACCCCCACCAGACATTGCCCCT...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGTCCAGGGGCAATGTCTaGTGGGGGTCTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRSRGNV*WGSFLL
Trigger: AAGCAAGAAAGACCCCCACCAGACATTGCCCCTGGA...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGTCACCTCATCATCAGTaGGCGATTTTGTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQSPHHQ*AILSEG
Trigger: CCCCTCGGACAAAATCGCCCACTGATGATGAGGTGA...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGTCACCTCATCATCAGTaGGCGATTTTGTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRSPHHQ*AILSEG
Trigger: CCCCTCGGACAAAATCGCCCACTGATGATGAGGTGA...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCGAAACACAGCACTCTTaGGGCGTTCCTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGETQHS*GVPGRR
Trigger: TCTCCTCCCAGGAACGCCCCAAGAGTGCTGTGTTTC...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAAACACAGCACTCTTaGGGCGTTCCTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSETQHS*GVPGRR
Trigger: TCTCCTCCCAGGAACGCCCCAAGAGTGCTGTGTTTC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCTCATGGAGCCACTCTaGTGCCGCCGCATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSALMEPL*CRRIRS
Trigger: TGACCGAATGCGGCGGCACCAGAGTGGCTCCATGAG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCCGCTTCTCCCTCATaGAGCCACTCTGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLSASPS*SHSGAA
Trigger: GGCGGCACCAGAGTGGCTCCATGAGGGAGAAGCGGA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGAGCTCAGACCCGCATaGTATAGCTGCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRELRPA*YSCCRR
Trigger: GCGCCGACAGCAGCTATACCATGCGGGTCTGAGCTC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGGAGCTTCACAGCATTaGCCTCAGCCAGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQGASQH*PQPGLA
Trigger: TGCAAGCCCTGGCTGAGGCCAATGCTGTGAAGCTCC...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCAGAATGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRQNVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGGACGGCTTCAGAATGTaGCTCTGTGGAGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRDGFRM*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTC...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGACGGCTTCAGAATGTaGCTCTGTGGAGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPDGFRM*LCGASQ
Trigger: CTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGGCATGGTGGGTGTGTaGACACTGAGGTATCCACGG +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFGMVGV*TLRYPR
Trigger: CCGTGGATACCTCAGTGTCCACACACCCACCATGCC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTGGCATGGTGGGTGTGTaGACACTGAGGTATCCACGG +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRGMVGV*TLRYPR
Trigger: CCGTGGATACCTCAGTGTCCACACACCCACCATGCC...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCATCCTTGGTGTCAGGCTaGCTCCAGAGGCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASSLVSG*LQRQCP
Trigger: TGGACACTGCCTCTGGAGCCAGCCTGACACCAAGGA...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGTCATCACCTTGTCTTTaGCTCAAGCAGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGSSPCL*LKQGGQ
Trigger: CTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCTCATCACCTTGTCTTTaGCTCAAGCAGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTASSPCL*LKQGGQ
Trigger: CTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCATGTGCTCCACTGGTaGGTCCTCCTAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGHVLHW*VLLGMR
Trigger: CCTCATCCCTAGGAGGACCCACCAGTGGAGCACATG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCCCCTTACCCCAGGATaGCGAGGCAGACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASPLTPG*RGRHQA
Trigger: TGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTAGGCGTACTCTCAGCTaGCCCACTGCACATTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRRRTLS*PTAHSR
Trigger: CCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCT...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGCCAAGCCGCCTCCTCTaGGCTTCGCACCGTCTCGTA +
Preference number: 4 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERPSRLL*ASHRLV
Trigger: TACGAGACGGTGCGAAGCCCAGAGGAGGCGGCTTGG...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGAGGTACCATGCCTTTaGTACAGCCCCCAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPEVPCL*YSPQRE
Trigger: TTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGAAAGGGGAAAGGAATTaGTTCCCTCTTGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWKGERN*FPLAVA
Trigger: GGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTT...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCTTATCGTGGACCGTaGGGGATGGTGGGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPSYRGP*GMVGSC
Trigger: ACAACTACCCACCATCCCCCACGGTCCACGATAAGA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTCATCCATCTTATCGTaGACCGTGGGGGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHSSILS*TVGDGG
Trigger: CCCACCATCCCCCACGGTCCACGATAAGATGGATGA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637508.1
3UTR CAA 72 bp CTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTaGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGANGLSPSLIT*SLAQAGWSVST
Trigger: GGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
3UTR CAA 72 bp TGCTGGGGTAAAGTCCCGGGGGTTTCTTGGGTGAGGTaGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: CWGKVPGVSWVR*RCHLVCRTLLG
Trigger: GCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCAAGAAACCCCCGGGACTTTACCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGCCGCTTCATGGAGTGTaGGCGCTTGCCAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERPLHGV*ALAKGD
Trigger: GTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGG...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCCGGAGGCTCTTTCTTaGCTTCTGGCCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLPEALS*LLASQA
Trigger: GGCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTGGTGGGCACAAGGCTaGTGTCTCTGGGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLWWAQG*CLWGCP
Trigger: TGGACACCCCCAGAGACATCAGCCTTGTGCCCACCA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGGAGAGCTCCTTATTaGTGTCCACGTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRWRAPY*CPRHNA
Trigger: AGCATTATGACGTGGACATCAATAAGGAGCTCTCCA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCTGGGTGTGTGGACACTaGGGTATCCACGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVWVCGH*GIHGPL
Trigger: CAGAGGACCGTGGATACCTCAGTGTCCACACACCCA...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGAGAGAGAGAGGAAATaGCCTGGGAGCCAATCCCAC +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQERERK*PGSQSH
Trigger: GTGGGATTGGCTCCCAGGTCATTTCCTCTCTCTCTC...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCATCAGGAGGGGGATGCTaGCCAGGATACTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASSGGGC*PGYSLP
Trigger: AGGAAGAGAGTATCCTGGGCAGCATCCCCCTCCTGA...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCATGTTGTCTGAGGGCTaGACTGCGGCTACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVMLSEG*TAATRK
Trigger: CTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACAT...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTTTTTGTCAGGGTTGGTaGGTGGTGGGAAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRFCQGW*VVGNSA
Trigger: GGCGGAGTTTCCCACCACGCACCAACCCTGACAAAA...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGGGTTCATGGAGCTCTTaGGCTGGGCAATTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRGSWSS*AGQFCQ
Trigger: CTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACC...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGGTTCATGGAGCTCTTaGGCTGGGCAATTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKGSWSS*AGQFCQ
Trigger: CTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCATAGATGTCCTCACTaGGAGGTGGCAGCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGHRCPH*EVAAAQ
Trigger: TTGAGCGGCTGCCACCTCGCAGTGAGGACATCTATG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCTCATACTCTATGGTaGTGTTTGTCAGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSAHTLW*CLSGPW
Trigger: CCACGGCCCTGACAAACAGCACCATAGAGTATGAGC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCTCCCAGAGGTCATCGTaGAGGGCAGAGACCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSASQRSS*RAETSD
Trigger: GTCTGAGGTCTCTGCCCTGCACGATGACCTCTGGGA...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTTGTTGAGAGCTGCCTaGTTCTCTGCCTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPLLRAA*FSASTS
Trigger: AGAGGTAGAGGCAGAGAAGCAGGCAGCTCTCAACAA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTATGTCTACCTCATGGATaGTGCGGTGGCGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVCLPHG*CGGGAP
Trigger: TGGTGCGCCGCCACCGCAGCATCCATGAGGTAGACA...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTGTCTACCTCATGGATaGTGCGGTGGCGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLCLPHG*CGGGAP
Trigger: TGGTGCGCCGCCACCGCAGCATCCATGAGGTAGACA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTACTTGGGGTGGCACATTaGACAGACAGCATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVLGVAH*TDSMRP
Trigger: GGGCCGCATGCTGTCTGTGCAATGTGCCACCCCAAG...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGGATGATGACAAGTaGTGTCCTTGGTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPARDDDK*CPWCQA
Trigger: AGCCTGACACCAAGGACAGCACTTGTCATCATCCCT...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGACACTGCACAGACCTaGTGTTCTCTAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASDTAQT*CSLATA
Trigger: GGCTGTGGCTAGAGAACAGCAGGTCTGTGCAGTGTC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCTGCCCTCAGACACTaGACAGACCTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQPALRH*TDLLFS
Trigger: AGAGAACAGCAGGTCTGTGCAGTGTCTGAGGGCAGG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCCTGCCCTCAGACACTaGACAGACCTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGPALRH*TDLLFS
Trigger: AGAGAACAGCAGGTCTGTGCAGTGTCTGAGGGCAGG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCTTGCCAATGTGTCCTaGTGCTTCCCCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQLANVS*CFPLLP
Trigger: TGGAAGGAGGGGGAAGCAGCAGGACACATTGGCAAG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGCCTTCCTGCTTGACTTaGCAATGTGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEPSCLT*QCVLLL
Trigger: AAGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGG...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCTCTGTCTTCCCCGCTaGCCTCCCGGGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSLCLPR*PPGAGG
Trigger: TCCACCTGCCCCGGGAGGGCAGCGGGGAAGACAGAG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGAGGAGGAATGCGTTTaGTTTTCTCTGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEEEECV*FSLSSP
Trigger: CGGGGAAGACAGAGAAAAGCAAACGCATTCCTCCTC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGGAGCCAATCCCACCTaGCAGTCTGCAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVGANPT*QSAGEK
Trigger: TTTCTCCCCTGCAGACTGGCAGGTGGGATTGGCTCC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTATGCCGTAGCCAGCCCTaGCCAAGAACATGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVCRSQP*PRTCLS
Trigger: GGAGAGGCATGTTCTTGGGCAGGGCTGGCTACGGCA...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp CCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTGCCACAAGATGCTAAGGGGATaGTACAGCTGTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PALPKNMPLPKAGEQVCHKMLRG*YSCLSP
Trigger: AGGGGACAAACAGCTGTAGCATCCCCTTAGCATCTT...GTGGCACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGTCGGACACCATGTTGTaGTTGGGTATGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGSDTML*LGMSLL
Trigger: CAACAGTGACATACCCAACCACAACATGGTGTCCGA...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCATGGGGTTCCGCTTCATaGAGTGTGAGCGCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASWGSAS*SVSACQ
Trigger: TTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCA...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGTCGAGTCTTGGCCTCTaGCTCAGGCTTAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRSSLGL*LRLREA
Trigger: AGCCTCCCTAAGCCTGAGCCAGAGGCCAAGACTCGA...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCTAAAGGGGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAACAGCTGGGAGGCCATTaGCTTTCACCGGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PKGERNWFPLAVASPAQEQLGGH*LSPEAL
Trigger: AAGAGCCTCCGGTGAAAGCCAATGGCCTCCCAGCTG...TTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCGATCATAGGCCGGCATaGAACAGATGCTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSADHRPA*NRCSPA
Trigger: GGCCGGAGAGCATCTGTTCCATGCCGGCCTATGATC...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAAACATCTCCAGCTCCTaGTGGGTCCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASNISSS*WVPIKA
Trigger: TGCCTTGATGGGGACCCACCAGGAGCTGGAGATGTT...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGGTGCTCATACTCTATaGTGCTGTTTGTCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAGAHTL*CCLSGP
Trigger: CGGCCCTGACAAACAGCACCATAGAGTATGAGCACC...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGTTCAGCACCTCATTCTaGGTGTCCAAATTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGFSTSF*VSKLSC
Trigger: GCAGCTCAATTTGGACACCCAGAATGAGGTGCTGAA...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCTCCAGATCTCCTTTTaGATTTGCCGGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRLQISF*ICRFST
Trigger: GGTGCTGAACCGGCAAATCCAAAAGGAGATCTGGAG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTCCCTCCATCACGTCCTaGATCCTCCAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPPSITS*ILQISF
Trigger: AAAGGAGATCTGGAGGATCCAGGACGTGATGGAGGG...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCAGGGGCAATGTCTGGTaGGGGTCTTTCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPRGNVW*GSFLLC
Trigger: ACAAAGCAAGAAAGACCCCCACCAGACATTGCCCCT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGTCCAGGGGCAATGTCTaGTGGGGGTCTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRSRGNV*WGSFLL
Trigger: AAGCAAGAAAGACCCCCACCAGACATTGCCCCTGGA...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCTCCAGGGGCAATGTCTaGTGGGGGTCTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGSRGNV*WGSFLL
Trigger: AAGCAAGAAAGACCCCCACCAGACATTGCCCCTGGA...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCTCACCTCATCATCAGTaGGCGATTTTGTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTSPHHQ*AILSEG
Trigger: CCCCTCGGACAAAATCGCCCACTGATGATGAGGTGA...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCGGGCTGCCTCCAGGTTaGAGATGTCTACCTCATGGA +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPGLPPG*RCLPHG
Trigger: TCCATGAGGTAGACATCTCCAACCTGGAGGCAGCCC...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCAGTCCCCCTCGCCGATaGGCACCACGTTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLSPPRR*APRSAY
Trigger: GTATGCAGAACGTGGTGCCCATCGGCGAGGGGGACT...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAGAGCTCAGACCCGCATaGTATAGCTGCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVELRPA*YSCCRR
Trigger: GCGCCGACAGCAGCTATACCATGCGGGTCTGAGCTC...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCCAGGGAATGTTCCACTaGAGTCACCACAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPQGMFH*SHHNPS
Trigger: GCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTG...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCATGTGCTCCACTGGTaGGTCCTCCTAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAHVLHW*VLLGMR
Trigger: CCTCATCCCTAGGAGGACCCACCAGTGGAGCACATG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp ACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTCCCTCCCGGGGCAGGTaGATCATGAGAGCGCCTAGC +
Preference number: 4 (lower is better)
Translates to: TLTSLVLFGIGCCYAVCSPSRGR*IMRAPS
Trigger: GCTAGGCGCTCTCATGATCCACCTGCCCCGGGAGGG...AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGATTAGTAGGTGTTCTTaGGACCGCTGGAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQISRCS*DRWKSG
Trigger: GCCTGACTTCCAGCGGTCCCAAGAACACCTACTAAT...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCGGACAGGCACAGGGTTaGGACCTAAAGGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPGQAQG*DLKAVT
Trigger: GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCC...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGCAGGATGTTCTAGGCTaGCGACAGGGTGTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKQDVLG*RQGVSK
Trigger: TTTACTGACACCCTGTCGCCAGCCTAGAACATCCTG...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGACCGTGGGGGATGGTaGGTAGTTGTAGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRDRGGW*VVVGEQ
Trigger: CTGTTCCCCTACAACTACCCACCATCCCCCACGGTC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGTGGACCGTGGGGGATaGTGGGTAGTTGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRVDRGG*WVVVGE
Trigger: TTCCCCTACAACTACCCACCATCCCCCACGGTCCAC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGTCCCGGAACACTTCTaGGTATGGAGGGACTTGCAT +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSVPEHF*VWRDLH
Trigger: ATGCAAGTCCCTCCATACCCAGAAGTGTTCCGGGAC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCGCTCCGGATCTAATCTaGTCTAATCAGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTAAPDLI*SNQSSL
Trigger: GAGAGATGACTGATTAGATCAGATTAGATCCGGAGC...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR TCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCGGAGCTGGCCTGTTTaGAGAGCCAGCCCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSRSWPV*RASPPW
Trigger: CCAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTCCG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTAGATTCACCCACTGCTaGAGCTGGTTCATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRRFTHC*SWFMEL
Trigger: GAGCTCCATGAACCAGCTTCAGCAGTGGGTGAATCT...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGAAAACGGGCACTGGGTaGGCGGACAGGGGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRKTGTG*ADRGVN
Trigger: ATTTACTCCCCTGTCCGCTCACCCAGTGCCCGTTTT...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGGACCTTGGGGGAGCTaGTGGATCGCCTCATCACAT +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLGPWGS*WIASSH
Trigger: ATGTGATGAGGCGATCCATCAGCTCCCCCAAGGTCC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR TCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTAGGGCCGTGGTCGCCTaGGACAGCTCCACGCGGATG +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCRAVVA*DSSTRM
Trigger: CATCCGCGTGGAGCTGTCTCAGGCGACCACGGCCCT...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCAACGCCAACTTTGTTaGGAGCTGCCTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGQRQLC*ELPASL
Trigger: CAGAGAAGCAGGCAGCTCTCAACAAAGTTGGCGTTG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACCTTCTTACCACTGCTaGTGGGGTCACCTCATCATC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASPSYHC*WGHLII
Trigger: GATGATGAGGTGACCCCATCAGCAGTGGTAAGAAGG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCCTTCTTACCACTGCTaGTGGGGTCACCTCATCATC +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFPSYHC*WGHLII
Trigger: GATGATGAGGTGACCCCATCAGCAGTGGTAAGAAGG...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCTCCCTCCTTCCTGCTTaGCTTGCCAATGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPSLLPA*LANVSC
Trigger: GCAGGACACATTGGCAAGTCAAGCAGGAAGGAGGGA...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp ACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTTGGATCCAGGCCTCTTaGTCCTCGGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: TLTSLVLFGIGCCYAVCSWIQAS*SSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCA...AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGGTTCATGGAGCTCTTaGGCTGGGCAATTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPGSWSS*AGQFCQ
Trigger: CTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCAGTACTCAGGGACCCTaGGAGACACAGGATAGAACC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPSTQGP*ETQDRT
Trigger: GGTTCTATCCTGTGTCTCGCAGGGTCCCTGAGTACT...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATTTGATGAGCTGGTTCTaGAGTGAATCCTTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHLMSWF*SESFLC
Trigger: ACACAAAAAGGATTCACTGCAGAACCAGCTCATCAA...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGCTCTAGCTCCATTTTaGGAAGCCGGGCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAALAPF*EAGQFP
Trigger: AGGAAATTGCCCGGCTTCGCAAAATGGAGCTAGAGC...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCTCTAGCTCCATTTTaGGAAGCCGGGCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSALAPF*EAGQFP
Trigger: AGGAAATTGCCCGGCTTCGCAAAATGGAGCTAGAGC...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCCTGTCTCTCTCTCTCTaGTACCCTTCCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPLSLSL*YPSQPA
Trigger: GGCAGGTTGGGAAGGGTAGCAGAGAGAGAGAGACAG...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCTGTCTCTCTCTCTCTaGTACCCTTCCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVLSLSL*YPSQPA
Trigger: GGCAGGTTGGGAAGGGTAGCAGAGAGAGAGAGACAG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCTTGCCAATGTGTCCTaGTGCTTCCCCCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVLANVS*CFPLLP
Trigger: TGGAAGGAGGGGGAAGCAGCAGGACACATTGGCAAG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCACAAGTCCTTCTCTCTaGCCCTTACCCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPTSPSL*PLPQDG
Trigger: GCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGT...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTTCTCAGCTGGCCCACTaGACATTCCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASSQLAH*TFQGEQ
Trigger: CTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGA...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGAGGAGGAATGCGTTTaGTTTTCTCTGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAEEECV*FSLSSP
Trigger: CGGGGAAGACAGAGAAAAGCAAACGCATTCCTCCTC...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGCCAGCCATGAAGGAGTaGAGAGGAATTAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQPAMKE*RGISRC
Trigger: ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGG...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGTCCGAGGGAATGCCCTaGCCCCGGCAAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGSEGMP*PRQDAF
Trigger: GAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGA...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCGGACTTCCGAGGGAATaGCCTGCCCCCGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: YTDILSAVWHRLLLRCLLGLPRE*PAPGKM
Trigger: CATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTCC...GAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCCTGTTTGGCATAGGCTaGTGTTACGCTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TASECGSVELHSIGLSQGLFGIG*CYAVCS
Trigger: AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAG...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGAGAGGATGCTGTTGTaGTTACTGCAGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPERMLL*LLQDPA
Trigger: TGCTGGATCCTGCAGTAACCACAACAGCATCCTCTC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCTCTTTCTTGACTTCTaGCCTCTCAGGCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRLFLDF*PLRPSL
Trigger: GAGAGAAGGCCTGAGAGGCCAGAAGTCAAGAAAGAG...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCCTGCCGCCCGTAGCTaGCGGGCTCCTTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCPAARS*RAPSTL
Trigger: GAGAGTGGAAGGAGCCCGCCAGCTACGGGCGGCAGG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTATGTTTGTCAGGGCCGTaGTCGCCTGAGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVCLSGP*SPETAP
Trigger: TGGAGCTGTCTCAGGCGACCACGGCCCTGACAAACA...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGGTGCTCATACTCTATaGTGCTGTTTGTCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFGAHTL*CCLSGP
Trigger: CGGCCCTGACAAACAGCACCATAGAGTATGAGCACC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCTCTTGGGGCGTTCCTaGGAGGAGAGTCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLLLGRS*EESPLV
Trigger: CACCAATGGACTCTCCTCCCAGGAACGCCCCAAGAG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTGGGAGGGCTTGGGGTaGCACATTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLWEGLG*HIAQTA
Trigger: TGCTGTCTGTGCAATGTGCCACCCCAAGCCCTCCCA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACAGAATGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASQNVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCAGAATGTGGCTCTGTaGAGCTTCACAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQQNVAL*SFTALA
Trigger: GGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCCTGCGGCATTCCCATaGGAGTGCAGGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCPAAFP*ECRGRG
Trigger: CCCCCTGCCCCTGCACTCCCATGGGAATGCCGCAGG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTACATGTGCTCCACTGGTaGGTCCTCCTAGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVHVLHW*VLLGMR
Trigger: CCTCATCCCTAGGAGGACCCACCAGTGGAGCACATG...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGAAATATCATGGAACTaGGTAGGTAAGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQEISWN*VGKAPR
Trigger: CCTTGGGGCCTTACCTACCCAGTTCCATGATATTTC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGGGGCAAGAAATATCATaGAACTGGGTAGGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRGQEIS*NWVGKA
Trigger: GGCCTTACCTACCCAGTTCCATGATATTTCTTGCCC...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAAGGCGTACTCTCAGCTaGCCCACTGCACATTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVRRTLS*PTAHSR
Trigger: CCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCT...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCTTGGAAGGCTGAGCTaGCTTAGTTCGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASLGRLS*LSSVPQ
Trigger: CTGGGGCACCGAACTAAGCCAGCTCAGCCTTCCAAG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAGAACACTTCTGGGTATaGAGGGACTTGCATGAAGAG +
Preference number: 4 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPEHFWV*RDLHEE
Trigger: CTCTTCATGCAAGTCCCTCCATACCCAGAAGTGTTC...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGTTCATAGTTTGCCTTaGGCTGCCCCCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPVHSLP*AAPWLS
Trigger: AGACAGCCAGGGGGCAGCCCAAGGCAAACTATGAAC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTGCCAGCCCGCCTTGGTaGCAGGTGCATTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCASPPW*QVHWGS
Trigger: GGAACCCCAATGCACCTGTCACCAAGGCGGGCTGGC...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGAACGTGTGTTTCCGGCTaGTGTTGTCTGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLARSSALDSQALDFRPRTCVSG*CCLRAA
Trigger: TGCAGCCCTCAGACAACATCAGCCGGAAACACACGT...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGATTTCACATCAGGAGGGGGATGCTaGCCAGGATACTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRCHLVCRTLLGPEADFTSGGGC*PGYSLP
Trigger: AGGAAGAGAGTATCCTGGGCAGCATCCCCCTCCTGA...TGTGAAATCAGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTTTTTGTCAGGGTTGGTaGGTGGTGGGAAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASFCQGW*VVGNSA
Trigger: GGCGGAGTTTCCCACCACGCACCAACCCTGACAAAA...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCAGTACTCAGGGACCCTaGGAGACACAGGATAGAACC +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVSTQGP*ETQDRT
Trigger: GGTTCTATCCTGTGTCTCGCAGGGTCCCTGAGTACT...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGAGTACTCAGGGACCCTaGGAGACACAGGATAGAACC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRSTQGP*ETQDRT
Trigger: GGTTCTATCCTGTGTCTCGCAGGGTCCCTGAGTACT...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGTGTCCAAATTGAGCTaGTCCCAGAGGTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRVSKLS*SQRSSC
Trigger: GCACGATGACCTCTGGGAGCAGCTCAATTTGGACAC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCATCTCCTTTTGGATTTaGCGGTTCAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPISFWI*RFSTSF
Trigger: GAATGAGGTGCTGAACCGGCAAATCCAAAAGGAGAT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGGTGGGGGTCTTTCTTaGTTTGTTCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PRMARQTPGTDLLTAISQGGGLS*FVHSLP
Trigger: AGGCAAACTATGAACAAAGCAAGAAAGACCCCCACC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGATGGAGCCACTCTGGTaGCGCCGCATTCGGTCAATC +
Preference number: 4 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGMEPLW*RRIRSI
Trigger: GATTGACCGAATGCGGCGGCACCAGAGTGGCTCCAT...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTTCAATCCGCTTCTCCTaGTCCTGCAGCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASSIRFS*SCSWLS
Trigger: AGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTGA...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTTGTATGTGTCCCCGCATGGTATAGCTaGTGTCGGCGCCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: REGSSEKECDKSKELVCVPAWYS*CRRPVG
Trigger: CCCCACGGGGCGCCGACAGCAGCTATACCATGCGGG...GACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGAGGAGGAATGCGTTTaGTTTTCTCTGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASEEECV*FSLSSP
Trigger: CGGGGAAGACAGAGAAAAGCAAACGCATTCCTCCTC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCCAGCCATGAAGGAGTaGAGAGGAATTAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHPAMKE*RGISRC
Trigger: ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTCCAGCCATGAAGGAGTaGAGAGGAATTAGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPPAMKE*RGISRC
Trigger: ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGG...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGCAGACTGAGGTACCATaGCTTTGGTACAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERQTEVP*LWYSPQ
Trigger: CTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTG...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGTGCGGACCCCGGCATaGTCAGCCTGTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRVRTPA*SACGER
Trigger: CCTCTCCCCACAGGCTGAGCATGCCGGGGTCCGCAC...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACAATTTTGTCAGGGTTaGTGCGTGGTGGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASQFCQG*CVVGNS
Trigger: GGAGTTTCCCACCACGCACCAACCCTGACAAAATTG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCATGGAGCTCTTGCGCTaGGCAATTTTGTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFMELLR*AILSGL
Trigger: CAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCAT...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCTCATCATAATAGACTaGCTGCCGGGAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASLIIID*LPGGAW
Trigger: CCAAGCCCCTCCCGGCAGCCAGTCTATTATGATGAG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGGTGCTCATACTCTATaGTGCTGTTTGTCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVGAHTL*CCLSGP
Trigger: CGGCCCTGACAAACAGCACCATAGAGTATGAGCACC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTTTCAGCACCTCATTCTaGGTGTCCAAATTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAFSTSF*VSKLSC
Trigger: GCAGCTCAATTTGGACACCCAGAATGAGGTGCTGAA...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTTCAGCACCTCATTCTaGGTGTCCAAATTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHFSTSF*VSKLSC
Trigger: GCAGCTCAATTTGGACACCCAGAATGAGGTGCTGAA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCTCCAGATCTCCTTTTaGATTTGCCGGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGLQISF*ICRFST
Trigger: GGTGCTGAACCGGCAAATCCAAAAGGAGATCTGGAG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAAGGGGCAATGTCTGGTaGGGGTCTTTCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASRGNVW*GSFLLC
Trigger: ACAAAGCAAGAAAGACCCCCACCAGACATTGCCCCT...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCGATGAGGACTTTGTCTaGAGTGGAGAGCTCCTTATT +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPDEDFV*SGELLI
Trigger: AATAAGGAGCTCTCCACTCCAGACAAAGTCCTCATC...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTCATCACCTTGTCTTTaGCTCAAGCAGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGSSPCL*LKQGGQ
Trigger: CTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCAGCCAGTCCTCGTCTaGGATGCCTGGGATAGGGGG +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSQPVLV*DAWDRG
Trigger: CCCCCTATCCCAGGCATCCCAGACGAGGACTGGCTG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCAGAGAGGAAATGACCTaGGAGCCAATCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLREEMT*EPIPPA
Trigger: GGCAGGTGGGATTGGCTCCCAGGTCATTTCCTCTCT...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGTTCCGTCTTTCATTGTaGCTTCCATGCCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEFRLSL*LPCQMS
Trigger: TGACATCTGGCATGGAAGCCACAATGAAAGACGGAA...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGCTCCGGATCTAATCTaGTCTAATCAGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPAPDLI*SNQSSL
Trigger: GAGAGATGACTGATTAGATCAGATTAGATCCGGAGC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR TCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCCGCTTCATGGAGTGTaGGCGCTTGCCAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSPLHGV*ALAKGD
Trigger: GTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTTGTATGTGTCCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACCC +
Preference number: 4 (lower is better)
Translates to: REGSSEKECDKSKELVCVRGSRH*RSRCGP
Trigger: GGGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCG...GACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTAGATTCACCCACTGCTaGAGCTGGTTCATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASRFTHC*SWFMEL
Trigger: GAGCTCCATGAACCAGCTTCAGCAGTGGGTGAATCT...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCAGATTCACCCACTGCTaGAGCTGGTTCATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLRFTHC*SWFMEL
Trigger: GAGCTCCATGAACCAGCTTCAGCAGTGGGTGAATCT...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGGGTGTCCAAATTaGGCTGCTCCCAGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLSGCPN*AAPRGH
Trigger: ATGACCTCTGGGAGCAGCTCAATTTGGACACCCAGA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTTGTACCGTTCAGGGATaGGGACTTTGTCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASCTVQG*GLCLEW
Trigger: CCACTCCAGACAAAGTCCTCATCCCTGAACGGTACA...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGATCTTTACTTGCATATaGACCAGTAACTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKIFTCI*TSNCPS
Trigger: GCTGGGACAGTTACTGGTTCATATGCAAGTAAAGAT...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCATCTTTACTTGCATATaGACCAGTAACTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPIFTCI*TSNCPS
Trigger: GCTGGGACAGTTACTGGTTCATATGCAAGTAAAGAT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTTCTCAGCTCGGAGCTaGTGCACCAGCCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCFSARS*CTSRSC
Trigger: GCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGAGAA...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAGCTCATACTCTATGGTaGTGTTTGTCAGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVAHTLW*CLSGPW
Trigger: CCACGGCCCTGACAAACAGCACCATAGAGTATGAGC...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGGTGTCCAAATTGAGCTaGTCCCAGAGGTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERVSKLS*SQRSSC
Trigger: GCACGATGACCTCTGGGAGCAGCTCAATTTGGACAC...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGGTGGGGGTCTTTCTTaGTTTGTTCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGTDLLTAISQAVATQPPGGGLS*FVHSLP
Trigger: AGGCAAACTATGAACAAAGCAAGAAAGACCCCCACC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCTAAAGGGGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAATTGTTGAGAGCTGCCTaGTTCTCTGCCTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: PKGERNWFPLAVASPAQELLRAA*FSASTS
Trigger: AGAGGTAGAGGCAGAGAAGCAGGCAGCTCTCAACAA...TTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCAGGGATGATGACAAGTaGTGTCCTTGGTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVRDDDK*CPWCQA
Trigger: AGCCTGACACCAAGGACAGCACTTGTCATCATCCCT...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCCTTCCTGCTTGACTTaGCAATGTGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVPSCLT*QCVLLL
Trigger: AAGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGCCTTCCTGCTTGACTTaGCAATGTGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRPSCLT*QCVLLL
Trigger: AAGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGG...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCTGCTGTTACGCTGTCTaGTCTTTCCAGCAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPCCYAV*SFQQAD
Trigger: ATCAGCCTGCTGGAAAGAGCAGACAGCGTAACAGCA...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCATCATGGAGGTAATGTaGTCATTGAGAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGIMEVM*SLRRPW
Trigger: CCAGGGCCTTCTCAATGAGCACATTACCTCCATGAT...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGTCCCACCTGTTTTATTaGACATGTCCAAGGTCGATA +
Preference number: 4 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPASHLFY*TCPRSI
Trigger: TATCGACCTTGGACATGTCCAATAAAACAGGTGGGA...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCTCGGACACCATGTTGTaGTTGGGTATGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPSDTML*LGMSLL
Trigger: CAACAGTGACATACCCAACCACAACATGGTGTCCGA...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCCTCTTTCTTGACTTCTaGCCTCTCAGGCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPLFLDF*PLRPSL
Trigger: GAGAGAAGGCCTGAGAGGCCAGAAGTCAAGAAAGAG...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGCTCTTTCTTGACTTCTaGCCTCTCAGGCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRLFLDF*PLRPSL
Trigger: GAGAGAAGGCCTGAGAGGCCAGAAGTCAAGAAAGAG...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCATGGAGCTCTTGCGCTaGGCAATTTTGTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVMELLR*AILSGL
Trigger: CAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCAT...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGGGGCTGCCTCCAGGTTaGAGATGTCTACCTCATGGA +
Preference number: 4 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGGLPPG*RCLPHG
Trigger: TCCATGAGGTAGACATCTCCAACCTGGAGGCAGCCC...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAAAATCTGTTTCCTGTaGAGGGAGAAAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RTSGGQRTASECGSVELHKICFL*REKGLG
Trigger: TCCCAAGCCTTTCTCCCTCCACAGGAAACAGATTTT...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCAAAATCTGTTTCCTGTaGAGGGAGAAAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSKICFL*REKGLG
Trigger: TCCCAAGCCTTTCTCCCTCCACAGGAAACAGATTTT...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCAGCCCTTTCGTGACTaGGGAATAGGATGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAQPFRD*GIGWKE
Trigger: TTCCTTCCATCCTATTCCCCAGTCACGAAAGGGCTG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTTTGACTGCAGCCTCTTaGTTATTGATCATGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCLTAAS*LLIMEV
Trigger: TACCTCCATGATCAATAACCAAGAGGCTGCAGTCAA...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGGAGAGGCAGCGTGTaGAGCTGGCCTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRGRGSV*SWPRPH
Trigger: ATGAGGCCGAGGCCAGCTCCACACGCTGCCTCTCCC...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS-3UTR TCA 90 bp ACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTAAAACGGGCACTGGGTaGGCGGACAGGGGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: TLTSLVLFGIGCCYAVCSKTGTG*ADRGVN
Trigger: ATTTACTCCCCTGTCCGCTCACCCAGTGCCCGTTTT...AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAAGAGCCCGACACCAGTaGAAAGGGGCTCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRRARHQ*KGAQGA
Trigger: AGCCCCCTGAGCCCCTTTTCACTGGTGTCGGGCTCT...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGATTGGTGGGGGACCCCTaGGAGCCCGACACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRLVGDP*EPDTSE
Trigger: TTCACTGGTGTCGGGCTCTCAGGGGTCCCCCACCAA...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGTGGAGAGCTCCTTATTaGTGTCCACGTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQWRAPY*CPRHNA
Trigger: AGCATTATGACGTGGACATCAATAAGGAGCTCTCCA...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGATCTTTACTTGCATATaGACCAGTAACTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRIFTCI*TSNCPS
Trigger: GCTGGGACAGTTACTGGTTCATATGCAAGTAAAGAT...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCCCCACTTTGATGGTTaGCAAAGGCTAAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASPHFDG*QRLSSL
Trigger: CAAGCTGCTTAGCCTTTGTCAACCATCAAAGTGGGG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCAGGTTTCTTTGCAACTaGAGATCTAAAAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: APYPRMARQTPGTDLLTARFLCN*RSKSSS
Trigger: GGATGAACTTTTAGATCTTCAGTTGCAAAGAAACCT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR GCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCATCTCCTTTTGGATTTaGCGGTTCAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFISFWI*RFSTSF
Trigger: GAATGAGGTGCTGAACCGGCAAATCCAAAAGGAGAT...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCATCTCCTTTTGGATTTaGCGGTTCAGCACCTCATTC +
Preference number: 4 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPISFWI*RFSTSF
Trigger: GAATGAGGTGCTGAACCGGCAAATCCAAAAGGAGAT...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGGCTTTGTTCATAGTTTaGCTTGGGCTCGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERALFIV*LGLVGA
Trigger: GGCTCCAACGAGCCCAAGGCAAACTATGAACAAAGC...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGCTTTGTTCATAGTTTaGCTTGGGCTCGTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLALFIV*LGLVGA
Trigger: GGCTCCAACGAGCCCAAGGCAAACTATGAACAAAGC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR GCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCCCATCTGGGGTGCATaGCTGCATGGGTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSPIWGA*LHGSPL
Trigger: CAAAGGAGACCCATGCAGGCATGCACCCCAGATGGG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGATTTCACACAAAGACTTCCATCCTaGCCAAATCCTTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LRCHLVCRTLLGPEADFTQRLPS*PNPCKA
Trigger: GGCCTTGCAAGGATTTGGGCAGGATGGAAGTCTTTG...TGTGAAATCAGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGCTTGCAAGATACAAATaGAGAACTCACTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSELARYK*RTHWDS
Trigger: AGAATCCCAGTGAGTTCTGCATTTGTATCTTGCAAG...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCACACCATGTTGTGGTTaGGTATGTCACTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPTPCCG*VCHCWW
Trigger: CCACCAACAGTGACATACCCAACCACAACATGGTGT...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCTCGGACACCATGTTGTaGTTGGGTATGTCACTGTTG +
Preference number: 4 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPSDTML*LGMSLL
Trigger: CAACAGTGACATACCCAACCACAACATGGTGTCCGA...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCGGATGTTGATGAGCTaGTTCTGCAGTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQRMLMS*FCSESF
Trigger: AAAGGATTCACTGCAGAACCAGCTCATCAACATCCG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCTCCAGATCTCCTTTTaGATTTGCCGGTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLLQISF*ICRFST
Trigger: GGTGCTGAACCGGCAAATCCAAAAGGAGATCTGGAG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGATCCGCTTCTCCCTCATaGAGCCACTCTGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRSASPS*SHSGAA
Trigger: GGCGGCACCAGAGTGGCTCCATGAGGGAGAAGCGGA...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGGAAATATCATGGAACTaGGTAGGTAAGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: STHKQSTGFVSKPWVQLREISWN*VGKAPR
Trigger: CCTTGGGGCCTTACCTACCCAGTTCCATGATATTTC...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGAGAGAAAAACAGGCCTaGGCAGGAACTGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQREKQA*AGTVGK
Trigger: TTTTCCTACAGTTCCTGCCCAGGCCTGTTTTTCTCT...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTGGAAGGAAGCCACTGTaGCAGAGGGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCGRKPL*QRDRHR
Trigger: CCTGTGCCTGTCCCTCTGCCACAGTGGCTTCCTTCC...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCACTTGCATGAAGAGTTaGGACCTGGGGGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLTCMKS*DLGEEF
Trigger: AAACTCCTCCCCCAGGTCCCAACTCTTCATGCAAGT...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR TCA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGGTCTGGATACCAGACTaGGGTACCATGCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGVWIPD*GTMPLV
Trigger: TACCAAAGGCATGGTACCTCAGTCTGGTATCCAGAC...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCAGCTGTTTGTCCCCTaGCAGAGATTCCATCTATCT +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLQLFVP*QRFHLS
Trigger: AGATAGATGGAATCTCTGTCAGGGGACAAACAGCTG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTAGCTCAGGAGGGGGATaGTGCCCAGGATACTCTCTT +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSSSGGG*CPGYSL
Trigger: AAGAGAGTATCCTGGGCAGCATCCCCCTCCTGAGCT...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTTTTTGTCAGGGTTGGTaGGTGGTGGGAAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSFCQGW*VVGNSA
Trigger: GGCGGAGTTTCCCACCACGCACCAACCCTGACAAAA...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGCTGCCAGGTAGAGGGTaGCTAAAGGGGAAAGGAATT +
Preference number: 4 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGLPGRG*LKGKGI
Trigger: AATTCCTTTCCCCTTTAGGCACCCTCTACCTGGCAG...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGATTGGCCCCAATATGTaGATAAATAGATATACGTGT +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWIGPNM*INRYTC
Trigger: ACACGTATATCTATTTATGCACATATTGGGGCCAAT...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGGGGTTTATACAAACTTaGAAGATACAAATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWGFIQT*KIQMQN
Trigger: GTTCTGCATTTGTATCTTGCAAGTTTGTATAAACCC...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTTCCCACCTGTTTTATTaGACATGTCCAAGGTCGATA +
Preference number: 4 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRSHLFY*TCPRSI
Trigger: TATCGACCTTGGACATGTCCAATAAAACAGGTGGGA...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTGATTTCACAACACCATGTTGTGGTTaGGTATGTCACTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRCHLVCRTLLGPEADFTTPCCG*VCHCWW
Trigger: CCACCAACAGTGACATACCCAACCACAACATGGTGT...TGTGAAATCAGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTTGGGGCACTGACTTCTaGGCTGGAGGGATCTGTACT +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSWGTDF*AGGICT
Trigger: AGTACAGATCCCTCCAGCCCAGAAGTCAGTGCCCCA...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGACTGTGCCGCACAGCTTaGGGCACTGACTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRLCRTA*GTDFWA
Trigger: AGCCCAGAAGTCAGTGCCCCAAGCTGTGCGGCACAG...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGAAAGCTGTGCTCCCTaGCCGGCTTGGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRESCAP*PAWGVV
Trigger: TACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTC...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTGATCATAGGCCGGCATaGAACAGATGCTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCDHRPA*NRCSPA
Trigger: GGCCGGAGAGCATCTGTTCCATGCCGGCCTATGATC...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTTGTATGTGTCAGCCAGGACCTCAGGTaGGCAGAGGACGGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: REGSSEKECDKSKELVCVSQDLR*AEDGFR
Trigger: TCTGAAGCCGTCCTCTGCCCACCTGAGGTCCTGGCT...GACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTAGGCTCCCTGTGACTTaGACATTAATGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASRLPVT*TLMRMV
Trigger: CACCATCCTCATTAATGTCCAAGTCACAGGGAGCCT...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGACTAGCAAATCAAATTaGCCCCAATATGTGCATAAA +
Preference number: 4 (lower is better)
Translates to: DFRGNALPPARCFLGELWTSKSN*PQYVHK
Trigger: TTTATGCACATATTGGGGCCAATTTGATTTGCTAGT...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CAA 72 bp GATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTaGTATGTGTCTGTGCTACAGGGCCAGGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: DQVKRSVTSPRN*YVSVLQGQGWP
Trigger: GGGCCATCCCTGGCCCTGTAGCACAGACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTGGAGAGCTCCTTATTaGTGTCCACGTCATAATGCT +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLWRAPY*CPRHNA
Trigger: AGCATTATGACGTGGACATCAATAAGGAGCTCTCCA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCCCTCCTTCCTGCTTaGCTTGCCAATGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCSLLPA*LANVSC
Trigger: GCAGGACACATTGGCAAGTCAAGCAGGAAGGAGGGA...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR TCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCTCTCACTCATCTGCTaGTCCAAATACTCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSALSLIC*SKYSRF
Trigger: AAACCTAGAGTATTTGGATCAGCAGATGAGTGAGAG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR GCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTAGCTCAGGAGGGGGATaGTGCCCAGGATACTCTCTT +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCSSGGG*CPGYSL
Trigger: AAGAGAGTATCCTGGGCAGCATCCCCCTCCTGAGCT...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCATTGATGAGCTGGTTCTaGAGTGAATCCTTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GRGRLQNVALWSFTALASLMSWF*SESFLC
Trigger: ACACAAAAAGGATTCACTGCAGAACCAGCTCATCAA...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCTTGATGAGCTGGTTCTaGAGTGAATCCTTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFLMSWF*SESFLC
Trigger: ACACAAAAAGGATTCACTGCAGAACCAGCTCATCAA...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTCTCCTCACCTCATTTaGCAATTCCATTCAGACATT +
Preference number: 4 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGSPHLI*QFHSDI
Trigger: AATGTCTGAATGGAATTGGCAAATGAGGTGAGGAGA...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCTCCCACCTGTTTTATTaGACATGTCCAAGGTCGATA +
Preference number: 4 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSASHLFY*TCPRSI
Trigger: TATCGACCTTGGACATGTCCAATAAAACAGGTGGGA...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTAACATCTCCAGCTCCTaGTGGGTCCCCATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCNISSS*WVPIKA
Trigger: TGCCTTGATGGGGACCCACCAGGAGCTGGAGATGTT...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCGGATGTTGATGAGCTaGTTCTGCAGTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASRMLMS*FCSESF
Trigger: AAAGGATTCACTGCAGAACCAGCTCATCAACATCCG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGATGAGGACTTTGTCTaGAGTGGAGAGCTCCTTATT +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLDEDFV*SGELLI
Trigger: AATAAGGAGCTCTCCACTCCAGACAAAGTCCTCATC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGATGGGAGGGCTTGGGGTaGCACATTGCACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRWEGLG*HIAQTA
Trigger: TGCTGTCTGTGCAATGTGCCACCCCAAGCCCTCCCA...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCTGGATCCAGGCCTCTTaGTCCTCGGGGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAWIQAS*SSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCA...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTACCTCAGACTCGAGGTaGTCATACTCTATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSTSDSR*SYSMVL
Trigger: CAGCACCATAGAGTATGAGCACCTCGAGTCTGAGGT...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCGCATTCGGTCAATCTaGTCCTCCACGCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCRIRSI*SSTLIL
Trigger: CAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCGCCTCAGCCAGGGCTTaGAGTCAGAGCTCAGACCCG +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAASARA*SQSSDP
Trigger: CGGGTCTGAGCTCTGACTGCAAGCCCTGGCTGAGGC...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR GCA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCTTTGTGCATACAACTaGAAACAGTTCCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLLCAYN*KQFLPE
Trigger: CTCTGGAAGGAACTGTTTGCAGTTGTATGCACAAAG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCATGGGTCTCCTTTGTaGATACAACTGCAAACAGTT +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASHGSPL*IQLQTV
Trigger: AACTGTTTGCAGTTGTATGCACAAAGGAGACCCATG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGACTCATCATAATAGACTaGCTGCCGGGAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRLIIID*LPGGAW
Trigger: CCAAGCCCCTCCCGGCAGCCAGTCTATTATGATGAG...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCTTGCCTTGGGCTCGTTaGAGCCAGGCTTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPALPWAR*SQAWWG
Trigger: CCCCCACCAAGCCTGGCTCCAACGAGCCCAAGGCAA...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp ACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTAGGCTCCCTGTGACTTaGACATTAATGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TLTSLVLFGIGCCYAVCSRLPVT*TLMRMV
Trigger: CACCATCCTCATTAATGTCCAAGTCACAGGGAGCCT...AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGATCATTGAGAAGGCCCTaGATGAATAATCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLARSSALDSQALDFRPRSLRRP*MNNQSF
Trigger: GAAGCTCTGATTATTCATCCAGGGCCTTCTCAATGA...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTTGCTGTTGTGGTTACTaGAGGATCCAGCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSCCCGY*RIQHLS
Trigger: GGAAAGATGCTGGATCCTGCAGTAACCACAACAGCA...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTTGTTGAGAGCTGCCTaGTTCTCTGCCTCTACCTCT +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCLLRAA*FSASTS
Trigger: AGAGGTAGAGGCAGAGAAGCAGGCAGCTCTCAACAA...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTATGGGCACCACGTTCTaGATACTGGATTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSMGTTF*ILDLAM
Trigger: CATTGCCAAATCCAGTATGCAGAACGTGGTGCCCAT...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp AGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTTGTATGTGTCTGGGTGAGGTTGAGATaGCACCTTGTCTGTAGGACC +
Preference number: 4 (lower is better)
Translates to: REGSSEKECDKSKELVCVWVRLR*HLVCRT
Trigger: GGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA...GACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTGTAGCAGTATTTGACTaGAGCCTCTTGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: AEELVGVLGTAGSQAEASVAVFD*SLLVID
Trigger: ATCAATAACCAAGAGGCTGCAGTCAAATACTGCTAC...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCAATTTTGTCAGGGTTaGTGCGTGGTGGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCQFCQG*CVVGNS
Trigger: GGAGTTTCCCACCACGCACCAACCCTGACAAAATTG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCAAATGCAGAACTCACTaGGATTCTTCAGTACCTAAA +
Preference number: 4 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVKCRTH*DSSVPK
Trigger: TTTAGGTACTGAAGAATCCCAGTGAGTTCTGCATTT...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGACAATTTTGTCAGGGTTaGTGCGTGGTGGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRQFCQG*CVVGNS
Trigger: GGAGTTTCCCACCACGCACCAACCCTGACAAAATTG...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCGGATGTTGATGAGCTaGTTCTGCAGTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: EPVTVPAMKECRGISRCSRMLMS*FCSESF
Trigger: AAAGGATTCACTGCAGAACCAGCTCATCAACATCCG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCTCTTGGGGCGTTCCTaGGAGGAGAGTCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPALLGRS*EESPLV
Trigger: CACCAATGGACTCTCCTCCCAGGAACGCCCCAAGAG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CCA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTGAAATATCATGGAACTaGGTAGGTAAGGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: YEPVTVPAMKECRGISRCEISWN*VGKAPR
Trigger: CCTTGGGGCCTTACCTACCCAGTTCCATGATATTTC...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR GCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCATAGATGTCCTCACTaGGAGGTGGCAGCCGCTCAA +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAHRCPH*EVAAAQ
Trigger: TTGAGCGGCTGCCACCTCGCAGTGAGGACATCTATG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAATCCTTAGTGCTGTTTaGCATAGGCTGCTGTTACGC +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRILSAV*HRLLLR
Trigger: GCGTAACAGCAGCCTATGCCAAACAGCACTAAGGAT...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
3UTR CAA 72 bp TTGGCTAGAAAGATGCTAAGGGGATGCTACAGCTGTTaGTCCCCTGACAGAGATTCCATCTATCTAACCTTC +
Preference number: 4 (lower is better)
Translates to: LARKMLRGCYSC*SPDRDSIYLTF
Trigger: GAAGGTTAGATAGATGGAATCTCTGTCAGGGGACAAACAGCTGTAGCATCCCCTTAGCATCTTTCTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR TCA 90 bp AGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTTGTATGTGTCCAAGGGGTATGGTCTTaGTATGCTAGGAATGATGTG +
Preference number: 4 (lower is better)
Translates to: REGSSEKECDKSKELVCVQGVWS*YARNDV
Trigger: CACATCATTCCTAGCATATCAAGACCATACCCCTTG...GACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR GCA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGTGGGGGTCTTTCTTaGTTTGTTCATAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRGGGLS*FVHSLP
Trigger: AGGCAAACTATGAACAAAGCAAGAAAGACCCCCACC...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCGACTGGGGAATAGGATaGAAGGAAGCCACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPADWGIG*KEATVA
Trigger: TGCCACAGTGGCTTCCTTCCATCCTATTCCCCAGTC...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCACACCATGTTGTGGTTaGGTATGTCACTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPATPCCG*VCHCWW
Trigger: CCACCAACAGTGACATACCCAACCACAACATGGTGT...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
3UTR CAA 72 bp TTCAAAGTGACAGTAGCAGTATTTGACTGCAGCCTCTaGGTTATTGATCATGGAGGTAATGTGCTCATTGAG +
Preference number: 4 (lower is better)
Translates to: FKVTVAVFDCSL*VIDHGGNVLIE
Trigger: CTCAATGAGCACATTACCTCCATGATCAATAACCAAGAGGCTGCAGTCAAATACTGCTACTGTCACTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CCA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCGATGAGGACTTTGTCTaGAGTGGAGAGCTCCTTATT +
Preference number: 4 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPADEDFV*SGELLI
Trigger: AATAAGGAGCTCTCCACTCCAGACAAAGTCCTCATC...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS TCA 90 bp ACCCCCTGGCACTCTTGGGCCCTCGGGGTAAGGGCTGCCCGGCTCTaGGGCTGGCTCCGGTCCAGCTGGGAGGCCATTGGCTTTCACCGG +
Preference number: 5 (lower is better)
Translates to: TPWHSWALGVRAARL*GWLRSSWEAIGFHR
Trigger: CCGGTGAAAGCCAATGGCCTCCCAGCTGGACCGGAGCCAGCCTCAGAGCCGGGCAGCCCTTACCCCGAGGGCCCAAGAGTGCCAGGGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp GGGTGTCTCGTAGGCATGCCCGCCAGGCTCCTCTGCCCGCAGGGCTaGCTCCAGGTTGGAGATGTCTACCTCATGGATGCTGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: GCLVGMPARLLCPQG*LQVGDVYLMDAAVA
Trigger: CGCCACCGCAGCATCCATGAGGTAGACATCTCCAACCTGGAGGCAGCCCTGCGGGCAGAGGAGCCTGGCGGGCATGCCTACGAGACACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp GGCGGCATCCAGCTCATCATAATAGACTGGCTGCCGGGAGGGGCTTaGGATCCAGACGGTGGCATCCTGCCGCCCGTAGCTGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GGIQLIIIDWLPGGA*DPDGGILPPVAGGL
Trigger: GAGCCCGCCAGCTACGGGCGGCAGGATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAGCCAGTCTATTATGATGAGCTGGATGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp AGGCATGCCCGCCAGGCTCCTCTGCCCGCAGGGCTGCCTCCAGGTTaGAGATGTCTACCTCATGGATGCTGCGGTGGCGGCGCACCACTT +
Preference number: 5 (lower is better)
Translates to: RHARQAPLPAGLPPG*RCLPHGCCGGGAPL
Trigger: AAGTGGTGCGCCGCCACCGCAGCATCCATGAGGTAGACATCTCCAACCTGGAGGCAGCCCTGCGGGCAGAGGAGCCTGGCGGGCATGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS TCA 90 bp GTGCGTGGTGGGAAACTCCGCCGGTGTCCCCCAGTCTCTCCATCCTaGGACGGGAAAGCTGTGCTCCCTGGCCGGCTTGGGGAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: VRGGKLRRCPPVSPS*DGKAVLPGRLGEWY
Trigger: GTACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTCAGGATGGAGAGACTGGGGGACACCGGCGGAGTTTCCCACCACGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS TCA 90 bp CATTGCGGAAGGCATGGCGCTTGTCCTCCAGGGCCCAGGGCGGGCTaGTCCGATCATAGGCCGGCATGGAACAGATGCTCTCCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: HCGRHGACPPGPRAG*SDHRPAWNRCSPAA
Trigger: TGCGGCCGGAGAGCATCTGTTCCATGCCGGCCTATGATCGGATCAGCCCGCCCTGGGCCCTGGAGGACAAGCGCCATGCCTTCCGCAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 90 bp TCCGCCGGTGTCCCCCAGTCTCTCCATCCTGAGACGGGAAAGCTGTaGTCCCTGGCCGGCTTGGGGAGTGGTACTGCCAGCCATTGGGCT +
Preference number: 5 (lower is better)
Translates to: SAGVPQSLHPETGKL*SLAGLGSGTASHWA
Trigger: AGCCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTCAGGATGGAGAGACTGGGGGACACCGGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp GTGTCCCCCAGTCTCTCCATCCTGAGACGGGAAAGCTGTGCTCCCTaGCCGGCTTGGGGAGTGGTACTGCCAGCCATTGGGCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: VSPSLSILRRESCAP*PAWGVVLPAIGLGR
Trigger: CCTGCCCAGCCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTCAGGATGGAGAGACTGGGGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS TCA 90 bp GATGTCCTCACTGCGAGGTGGCAGCCGCTCAAAACGGGCACTGGGTaGGCGGACAGGGGAGTAAATGCGGGCACGGCTGTAGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: DVLTARWQPLKTGTG*ADRGVNAGTAVGAL
Trigger: CAGGGCTCCTACAGCCGTGCCCGCATTTACTCCCCTGTCCGCTCACCCAGTGCCCGTTTTGAGCGGCTGCCACCTCGCAGTGAGGACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp GCCCGGACGCTGGGCCGCTCTGGAGGGACCTCGGACACCATGTTGTaGTTGGGTATGTCACTGTTGGTGGTAGCCGGGCGTTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: ARTLGRSGGTSDTML*LGMSLLVVAGRFPP
Trigger: AGGTGGGAAACGCCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAGCGTCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp CTTCTCACAGCCTCGGCCATCACCCTCCCCTCGAGTCTTGGCCTCTaGCTCAGGCTTAGGGAGGCTGTTGTGGGGTGGCTGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LLTASAITLPSSLGL*LRLREAVVGWLLVV
Trigger: CACCACCAGCAGCCACCCCACAACAGCCTCCCTAAGCCTGAGCCAGAGGCCAAGACTCGAGGGGAGGGTGATGGCCGAGGCTGTGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp AGTCTCTCCATCCTGAGACGGGAAAGCTGTGCTCCCTGGCCGGCTTaGGGAGTGGTACTGCCAGCCATTGGGCTGGGCAGGCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SLSILRRESCAPWPA*GVVLPAIGLGRLFP
Trigger: GGGGAACAGCCTGCCCAGCCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTCAGGATGGAGAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp CATCATAATAGACTGGCTGCCGGGAGGGGCTTGGGATCCAGACGGTaGCATCCTGCCGCCCGTAGCTGGCGGGCTCCTTCCACTCTCGCA +
Preference number: 5 (lower is better)
Translates to: HHNRLAAGRGLGSRR*HPAARSWRAPSTLA
Trigger: TGCGAGAGTGGAAGGAGCCCGCCAGCTACGGGCGGCAGGATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAGCCAGTCTATTATGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp GCCGGGAGCTGCAGGCTCCTCCGCTTCTCCCTCATGGAGCCACTCTaGTGCCGCCGCATTCGGTCAATCTGCTCCTCCACGCTCATCTTG +
Preference number: 5 (lower is better)
Translates to: AGSCRLLRFSLMEPL*CRRIRSICSSTLIL
Trigger: CAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCGGCGGCACCAGAGTGGCTCCATGAGGGAGAAGCGGAGGAGCCTGCAGCTCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGCCCTCCCCTCGAGTCTaGGCCTCTGGCTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRPSPRV*ASGSGL
Trigger: TAAGCCTGAGCCAGAGGCCAAGACTCGAGGGGAGGG...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCCGGAAGGCATGGCGCTaGTCCTCCAGGGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TASECGSVELHSIGLSQGRKAWR*SSRAQG
Trigger: GCCCTGGGCCCTGGAGGACAAGCGCCATGCCTTCCG...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGCTGCCGGGAGGGGCTaGGGATCCAGACGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKAAGRG*GSRRWH
Trigger: ATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAGC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCAAGTCCTCCTCTGTGCTaGGCGGTGTCCGTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPSPPLC*AVSVPR
Trigger: CCGGGGCACGGACACCGCCAAGCACAGAGGAGGACT...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTTTGCCTTGGGCTCGTaGGAGCCAGGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRFALGS*EPGLVG
Trigger: CCCCACCAAGCCTGGCTCCAACGAGCCCAAGGCAAA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATCTCTGCCTCTACCTCTaGCCTGGTGGGCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHLCLYL*PGGHKA
Trigger: AGCCTTGTGCCCACCAGGCAAGAGGTAGAGGCAGAG...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATTCCTCCACGCTCATCTaGACCTTCCCCTCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHSSTLI*TFPSPG
Trigger: TCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGA...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGGGCCAGGTTCCTCGTaGGAGCCAGGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKGPGSS*EPGLVG
Trigger: CCCCACCAAGCCTGGCTCCAACGAGGAACCTGGCCC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS TCA 90 bp GCCCGCCTTGGTGACAGGTGCATTGGGGTTCCGCTTCATGGAGTGTaGGCGCTTGCCAAAGGCGACGGCTTTGCGGGCTGTGCGAGTTGC +
Preference number: 5 (lower is better)
Translates to: ARLGDRCIGVPLHGV*ALAKGDGFAGCASC
Trigger: GCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCAATGCACCTGTCACCAAGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp GGGAGCTGCAGGCTCCTCCGCTTCTCCCTCATGGAGCCACTCTGGTaGCGCCGCATTCGGTCAATCTGCTCCTCCACGCTCATCTTGACC +
Preference number: 5 (lower is better)
Translates to: GSCRLLRFSLMEPLW*RRIRSICSSTLILT
Trigger: GGTCAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCGGCGGCACCAGAGTGGCTCCATGAGGGAGAAGCGGAGGAGCCTGCAGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp TTCTGGGCTGGAGGGATCTGTACTCGAGCAGCCTCCCCCATGGCCTaGATCCAGGCCTCTTGCTCCTCGGGGCTCTCGGCACTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FWAGGICTRAASPMA*IQASCSSGLSALKK
Trigger: CTTCTTCAGTGCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCAGGCCATGGGGGAGGCTGCTCGAGTACAGATCCCTCCAGCCCAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp TCTGGCTTCTCATGGCTGTGCCGCACAGCTTGGGGCACTGACTTCTaGGCTGGAGGGATCTGTACTCGAGCAGCCTCCCCCATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SGFSWLCRTAWGTDF*AGGICTRAASPMAW
Trigger: CCAGGCCATGGGGGAGGCTGCTCGAGTACAGATCCCTCCAGCCCAGAAGTCAGTGCCCCAAGCTGTGCGGCACAGCCATGAGAAGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp GCCTCTGGCTCAGGCTTAGGGAGGCTGTTGTGGGGTGGCTGCTGGTaGTGCTTGCTGGGTGGGACGTTCTCCGAGTCTGGCTTCTCATGG +
Preference number: 5 (lower is better)
Translates to: ASGSGLGRLLWGGCW*CLLGGTFSESGFSW
Trigger: CCATGAGAAGCCAGACTCGGAGAACGTCCCACCCAGCAAGCACCACCAGCAGCCACCCCACAACAGCCTCCCTAAGCCTGAGCCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp TCGAGTCTTGGCCTCTGGCTCAGGCTTAGGGAGGCTGTTGTGGGGTaGCTGCTGGTGGTGCTTGCTGGGTGGGACGTTCTCCGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: SSLGLWLRLREAVVG*LLVVLAGWDVLRVW
Trigger: CCAGACTCGGAGAACGTCCCACCCAGCAAGCACCACCAGCAGCCACCCCACAACAGCCTCCCTAAGCCTGAGCCAGAGGCCAAGACTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS-3UTR CAA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGCCAAAGGCGACGGCTTaGCGGGCTGTGCGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAPKATA*RAVRVA
Trigger: GGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGG...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTCTGGATCCAGGCCTCTaGCTCCTCGGGGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: PGTDLLTAISQAVATQPPLDPGL*LLGALG
Trigger: GCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCAG...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCGGAAGGCATGGCGCTaGTCCTCCAGGGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQRKAWR*SSRAQG
Trigger: GCCCTGGGCCCTGGAGGACAAGCGCCATGCCTTCCG...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACGGAAGGCATGGCGCTaGTCCTCCAGGGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GRGRLQNVALWSFTALASRKAWR*SSRAQG
Trigger: GCCCTGGGCCCTGGAGGACAAGCGCCATGCCTTCCG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCACAGACGACAGGGGGTTaGCTGGAGGAGCCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPQTTGG*LEEPGK
Trigger: CTTCCCCGGCTCCTCCAGCAAACCCCCTGTCGTCTG...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTGGCCTCAGCCAGGGCTaGCAGTCAGAGCTCAGACCC +
Preference number: 5 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCGLSQG*QSELRP
Trigger: GGGTCTGAGCTCTGACTGCAAGCCCTGGCTGAGGCC...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS GCA 90 bp AATTTCCTCCCGGGGTGTCTCGTAGGCATGCCCGCCAGGCTCCTCTaGCCGCAGGGCTGCCTCCAGGTTGGAGATGTCTACCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: NFLPGCLVGMPARLL*PQGCLQVGDVYLMD
Trigger: ATCCATGAGGTAGACATCTCCAACCTGGAGGCAGCCCTGCGGGCAGAGGAGCCTGGCGGGCATGCCTACGAGACACCCCGGGAGGAAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp CATAGATGTCCTCACTGCGAGGTGGCAGCCGCTCAAAACGGGCACTaGGTGAGCGGACAGGGGAGTAAATGCGGGCACGGCTGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: HRCPHCEVAAAQNGH*VSGQGSKCGHGCRS
Trigger: GCTCCTACAGCCGTGCCCGCATTTACTCCCCTGTCCGCTCACCCAGTGCCCGTTTTGAGCGGCTGCCACCTCGCAGTGAGGACATCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATTTGGGTATGTCACTGTaGGTGGTAGCCGGGCGTTTC +
Preference number: 5 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHLGMSL*VVAGRF
Trigger: GAAACGCCCGGCTACCACCAACAGTGACATACCCAA...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACCCGGAGCTGGCCTGTTaGAAGAGCCAGCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: RTSGGQRTASECGSVELHPELAC*KSQPAL
Trigger: CAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTCCGG...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCTGGATCCAGGCCTCTaGCTCCTCGGGGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGLDPGL*LLGALG
Trigger: GCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCAG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCGGCTGCTGGTGGTGCTaGCTGGGTGGGACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TASECGSVELHSIGLSQGGCWWC*LGGTFS
Trigger: GGAGAACGTCCCACCCAGCAAGCACCACCAGCAGCC...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGCCCTCCCCTCGAGTCTaGGCCTCTGGCTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEPSPRV*ASGSGL
Trigger: TAAGCCTGAGCCAGAGGCCAAGACTCGAGGGGAGGG...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGCCAGCTGGGAGGCCATaGGCTTTCACCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKPAGRP*AFTGGS
Trigger: AGAGCCTCCGGTGAAAGCCAATGGCCTCCCAGCTGG...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGCTGCCGGGAGGGGCTaGGGATCCAGACGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFAAGRG*GSRRWH
Trigger: ATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAGC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGCTGCCGGGAGGGGCTaGGGATCCAGACGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQAAGRG*GSRRWH
Trigger: ATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAGC...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCAGTCCTCCTCTGTGCTaGGCGGTGTCCGTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFSPPLC*AVSVPR
Trigger: CCGGGGCACGGACACCGCCAAGCACAGAGGAGGACT...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGCTCTGCCTCTACCTCTaGCCTGGTGGGCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGLCLYL*PGGHKA
Trigger: AGCCTTGTGCCCACCAGGCAAGAGGTAGAGGCAGAG...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS TCA 90 bp CCCGGCATGCTCAGCCTTAAACGTGTGTTTCCGGCTGATGTTGTCTaGGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAGGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: PGMLSLKRVFPADVV*GLHCGYPEAQEGDA
Trigger: AGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGCTGAGCATGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp TGCTCAGCCTTAAACGTGTGTTTCCGGCTGATGTTGTCTGAGGGCTaGACTGCGGCTACCCGGAAGCTCAGGAGGGGGATGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CSALNVCFRLMLSEG*TAATRKLRRGMLPR
Trigger: CCTGGGCAGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp CACCGGAGGCTCTTTCTTGACTTCTGGCCTCTCAGGCCTTCTCTCTaGCTTCTCACAGCCTCGGCCATCACCCTCCCCTCGAGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: HRRLFLDFWPLRPSL*LLTASAITLPSSLG
Trigger: GCCAAGACTCGAGGGGAGGGTGATGGCCGAGGCTGTGAGAAGGCAGAGAGAAGGCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp CAGAGTAGCTGGACGGGTGAAGGAGTCTGGGGCTGCATTCCCATCTaGACGGCTGAAACCCATGCCAGCCCGACCTGTAGGGAGACAGTC +
Preference number: 5 (lower is better)
Translates to: QSSWTGEGVWGCIPI*TAETHASPTCRETV
Trigger: GACTGTCTCCCTACAGGTCGGGCTGGCATGGGTTTCAGCCGTGCAGATGGGAATGCAGCCCCAGACTCCTTCACCCGTCCAGCTACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 90 bp GAGCTAAGGACGCAGAGTAGCTGGACGGGTGAAGGAGTCTGGGGCTaGATTCCCATCTGCACGGCTGAAACCCATGCCAGCCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: ELRTQSSWTGEGVWG*IPICTAETHASPTC
Trigger: ACAGGTCGGGCTGGCATGGGTTTCAGCCGTGCAGATGGGAATGCAGCCCCAGACTCCTTCACCCGTCCAGCTACTCTGCGTCCTTAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 90 bp CATGGAGCTCTTGCGCTGGGCAATTTTGTCAGGGTTGGTGCGTGGTaGGAAACTCCGCCGGTGTCCCCCAGTCTCTCCATCCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: HGALALGNFVRVGAW*ETPPVSPSLSILRR
Trigger: CCGTCTCAGGATGGAGAGACTGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp CCTCCCTGTGTGGCAGTCCTACCGATGAGAAGCAAGTCGACCAGATaGGCGTGGATGCTGTGGAACCAGAGCTGGTGGCTAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: PPCVAVLPMRSKSTR*AWMLWNQSWWLGWG
Trigger: GCCCCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCATCTGGTCGACTTGCTTCTCATCGGTAGGACTGCCACACAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 90 bp CTCAGTGAGCTAAGGACGCAGAGTAGCTGGACGGGTGAAGGAGTCTaGGGCTGCATTCCCATCTGCACGGCTGAAACCCATGCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: LSELRTQSSWTGEGV*GCIPICTAETHASP
Trigger: CGGGCTGGCATGGGTTTCAGCCGTGCAGATGGGAATGCAGCCCCAGACTCCTTCACCCGTCCAGCTACTCTGCGTCCTTAGCTCACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCCGGAGCTGGCCTGTTaGAAGAGCCAGCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFPELAC*KSQPAL
Trigger: CAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTCCGG...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTCCAGCTGGGAGGCCATaGGCTTTCACCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEAPAGRP*AFTGGS
Trigger: AGAGCCTCCGGTGAAAGCCAATGGCCTCCCAGCTGG...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTCACCCCCTGGCACTCTaGGGCCCTCGGGGTAAGGGC +
Preference number: 5 (lower is better)
Translates to: AEELVGVLGTAGSQAEASHPLAL*GPRGKG
Trigger: GCCCTTACCCCGAGGGCCCAAGAGTGCCAGGGGGTG...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCACTCTATGGTGCTGTTaGTCAGGGCCGTGGTCGCCT +
Preference number: 5 (lower is better)
Translates to: APYPRMARQTPGTDLLTATLWCC*SGPWSP
Trigger: AGGCGACCACGGCCCTGACAAACAGCACCATAGAGT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCAGTCCTCCTCTGTGCTaGGCGGTGTCCGTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSASPPLC*AVSVPR
Trigger: CCGGGGCACGGACACCGCCAAGCACAGAGGAGGACT...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGGGAAACACAGCACTCTaGGGGCGTTCCTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRGNTAL*GRSWEE
Trigger: CTCCTCCCAGGAACGCCCCAAGAGTGCTGTGTTTCC...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGGAAACACAGCACTCTaGGGGCGTTCCTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PRMARQTPGTDLLTAISQGNTAL*GRSWEE
Trigger: CTCCTCCCAGGAACGCCCCAAGAGTGCTGTGTTTCC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGCCTCAGCCAGGGCTaGCAGTCAGAGCTCAGACCC +
Preference number: 5 (lower is better)
Translates to: GRGRLQNVALWSFTALASGLSQG*QSELRP
Trigger: GGGTCTGAGCTCTGACTGCAAGCCCTGGCTGAGGCC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATATCCTGCCCAAATCCTaGCAAGGCCAGAGACCCTTT +
Preference number: 5 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHILPKS*QGQRPF
Trigger: AAAGGGTCTCTGGCCTTGCAAGGATTTGGGCAGGAT...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGCTTTGTTCATAGTTaGCCTTGGGCTGCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRCFVHS*PWAAPW
Trigger: CCAGGGGGCAGCCCAAGGCAAACTATGAACAAAGCA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS TCA 90 bp TCTGGTGCCGCCGCATTCGGTCAATCTGCTCCTCCACGCTCATCTTaGCCTTCCCCTCGCCAGGAAACACAGCACTCTTGGGGCGTTCCT +
Preference number: 5 (lower is better)
Translates to: SGAAAFGQSAPPRSS*PSPRQETQHSWGVP
Trigger: AGGAACGCCCCAAGAGTGCTGTGTTTCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCGGCGGCACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 90 bp GCTGGTTCATGGAGCTCTTGCGCTGGGCAATTTTGTCAGGGTTGGTaGGTGGTGGGAAACTCCGCCGGTGTCCCCCAGTCTCTCCATCCT +
Preference number: 5 (lower is better)
Translates to: AGSWSSCAGQFCQGW*VVGNSAGVPQSLHP
Trigger: AGGATGGAGAGACTGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp ATCGCCTCATCACATAGGCAGCAGGGTCAGCATAGATGTCCTCACTaGGAGGTGGCAGCCGCTCAAAACGGGCACTGGGTGAGCGGACAG +
Preference number: 5 (lower is better)
Translates to: IASSHRQQGQHRCPH*EVAAAQNGHWVSGQ
Trigger: CTGTCCGCTCACCCAGTGCCCGTTTTGAGCGGCTGCCACCTCGCAGTGAGGACATCTATGCTGACCCTGCTGCCTATGTGATGAGGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 90 bp ACGCCAACTTTGTTGAGAGCTGCCTGCTTCTCTGCCTCTACCTCTTaGCTGGTGGGCACAAGGCTGATGTCTCTGGGGGTGTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: TPTLLRAACFSASTS*LVGTRLMSLGVSRG
Trigger: GCCCCTGGACACCCCCAGAGACATCAGCCTTGTGCCCACCAGGCAAGAGGTAGAGGCAGAGAAGCAGGCAGCTCTCAACAAAGTTGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 90 bp ACAGTCACCTTAAACGTGTGTTTCCGGCTGATGTTGTCTGAGGGCTaGACTGCGGCTACCCGGAAGCTCAGGAGGGGGATGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TVTLNVCFRLMLSEG*TAATRKLRRGMLPR
Trigger: CCTGGGCAGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGTGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS CCA 90 bp CCGATCATAGGCCGGCATGGAACAGATGCTCTCCGGCCGCACTCCTaGCGGGTAGTACTGATAATCATCGGGGTACTGGGAGGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: PIIGRHGTDALRPHS*RVVLIIIGVLGGVG
Trigger: CCCTACTCCTCCCAGTACCCCGATGATTATCAGTACTACCCGCCAGGAGTGCGGCCGGAGAGCATCTGTTCCATGCCGGCCTATGATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp TCCTTGGGTGGTGGTAGGGGTCGCCTAGGTGCCCTAGTAGGCCTGTaGCTTCCTGGTATTCGGCCAGAATGCTACTGGTCAGAGGACTGG +
Preference number: 5 (lower is better)
Translates to: SLGGGRGRLGALVGL*LPGIRPECYWSEDW
Trigger: CCAGTCCTCTGACCAGTAGCATTCTGGCCGAATACCAGGAAGCCACAGGCCTACTAGGGCACCTAGGCGACCCCTACCACCACCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCCAAAGGCGACGGCTTaGCGGGCTGTGCGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVPKATA*RAVRVA
Trigger: GGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TCTGGATACCAGACTGAGGTACCATGCCTTTGGTACAGCCCCCAGAGAGAAAGGCTGGATCCAGGCCTCTaGCTCCTCGGGGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: SGYQTEVPCLWYSPQRERLDPGL*LLGALG
Trigger: GCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCAG...CCTTTCTCTCTGGGGGCTGTACCAAAGGCATGGTACCTCAGTCTGGTATCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCGGCTGCTGGTGGTGCTaGCTGGGTGGGACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVGCWWC*LGGTFS
Trigger: GGAGAACGTCCCACCCAGCAAGCACCACCAGCAGCC...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGACCGGAGGCTCTTTCTaGACTTCTGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPATGGSF*TSGLSG
Trigger: GCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGGT...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCTCCTCAAGGCGTACTCTCAGCTGGCCCACTGCACATTCCAGGGGGAACAGGGTTGCGCTGGGCAATTTaGTCAGGGTTGGTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: PPQGVLSAGPLHIPGGTGLRWAI*SGLVRG
Trigger: ACCACGCACCAACCCTGACAAAATTGCCCAGCGCAA...CCCTGTTCCCCCTGGAATGTGCAGTGGGCCAGCTGAGAGTACGCCTTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTGGGTATGGAGGGACCTaGGGGGAGCTGATGGATCGC +
Preference number: 5 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRGYGGT*GELMDR
Trigger: GCGATCCATCAGCTCCCCCAAGGTCCCTCCATACCC...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGACTCTATGGTGCTGTTaGTCAGGGCCGTGGTCGCCT +
Preference number: 5 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRTLWCC*SGPWSP
Trigger: AGGCGACCACGGCCCTGACAAACAGCACCATAGAGT...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCGGCACAACGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: APYPRMARQTPGTDLLTAGTTPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCGTTGTGCC...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCATGGGAGGAGAGTCCATaGGTGAGCCCACTGGCATTC +
Preference number: 5 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPWEESP*VSPLAF
Trigger: GAATGCCAGTGGGCTCACCAATGGACTCTCCTCCCA...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGTGGGAGGAGAGTCCATaGGTGAGCCCACTGGCATTC +
Preference number: 5 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAWEESP*VSPLAF
Trigger: GAATGCCAGTGGGCTCACCAATGGACTCTCCTCCCA...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACTCCTCCACGCTCATCTaGACCTTCCCCTCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RTSGGQRTASECGSVELHSSTLI*TFPSPG
Trigger: TCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGA...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGAGGGCTGCCTCCAGGTaGGAGATGTCTACCTCATGG +
Preference number: 5 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKRAASR*EMSTSW
Trigger: CCATGAGGTAGACATCTCCAACCTGGAGGCAGCCCT...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGAGGCTCCCTGTGACTaGGACATTAATGAGGATGGT +
Preference number: 5 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHEAPCD*DINEDG
Trigger: ACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS TCA 90 bp CCAGCACACAGTCACCTTAAACGTGTGTTTCCGGCTGATGTTGTCTaGGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAGGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: PAHSHLKRVFPADVV*GLHCGYPEAQEGDA
Trigger: AGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGTGACTGTGTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS TCA 90 bp GACAGCACGGGGTTGCTTTCCCTCCCTGTGTGGCAGTCCTACCGATaGGAAGCAAGTCGACCAGATGGGCGTGGATGCTGTGGAACCAGA +
Preference number: 5 (lower is better)
Translates to: DSTGLLSLPVWQSYR*EASRPDGRGCCGTR
Trigger: TCTGGTTCCACAGCATCCACGCCCATCTGGTCGACTTGCTTCTCATCGGTAGGACTGCCACACAGGGAGGGAAAGCAACCCCGTGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 90 bp CCCGGCGCAGATTCACCCACTGCTGAAGCTGGTTCATGGAGCTCTTaGGCTGGGCAATTTTGTCAGGGTTGGTGCGTGGTGGGAAACTCC +
Preference number: 5 (lower is better)
Translates to: PGADSPTAEAGSWSS*AGQFCQGWCVVGNS
Trigger: GGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACCAGCTTCAGCAGTGGGTGAATCTGCGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp TTCTCCCTCATGGAGCCACTCTGGTGCCGCCGCATTCGGTCAATCTaGTCCTCCACGCTCATCTTGACCTTCCCCTCGCCAGGAAACACA +
Preference number: 5 (lower is better)
Translates to: FSLMEPLWCRRIRSI*SSTLILTFPSPGNT
Trigger: TGTGTTTCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCGGCGGCACCAGAGTGGCTCCATGAGGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp GAAGCTGGTTCATGGAGCTCTTGCGCTGGGCAATTTTGTCAGGGTTaGTGCGTGGTGGGAAACTCCGCCGGTGTCCCCCAGTCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: EAGSWSSCAGQFCQG*CVVGNSAGVPQSLH
Trigger: ATGGAGAGACTGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 90 bp CCCAGCCCTTGGGCAAACCTGGGCAGGAGGTGTGTCCACTCTGGATaGGTGACTTTGTTCCAGGGTGCACCCAGCTGGTTGACTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PSPWANLGRRCVHSG*VTLFQGAPSWLTFP
Trigger: AGGAAAAGTCAACCAGCTGGGTGCACCCTGGAACAAAGTCACCCATCCAGAGTGGACACACCTCCTGCCCAGGTTTGCCCAAGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564627.2
CDS CCA 90 bp TGTGTGGCAGTCCTACCGATGAGAAGCAAGTCGACCAGATGGGCGTaGATGCTGTGGAACCAGAGCTGGTGGCTAGGATGGGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CVAVLPMRSKSTRWA*MLWNQSWWLGWGCS
Trigger: TGAGCAGCCCCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCATCTGGTCGACTTGCTTCTCATCGGTAGGACTGCCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGAGGGAGAGGATGCTGTaGTGGTTACTGCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: DFRGNALPPARCFLGELWRERML*WLLQDP
Trigger: TGGATCCTGCAGTAACCACAACAGCATCCTCTCCCT...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCGTGTTCCGTCTTTCATaGTGGCGGCTTCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: APYPRMARQTPGTDLLTAVFRLS*WRLLRC
Trigger: ACACCTCAGAAGCCGCCACAATGAAAGACGGAACAC...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp CGTAGCCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTTTGGGTATGTCACTGTaGGTGGTAGCCGGGCGTTTC +
Preference number: 5 (lower is better)
Translates to: RSQPCPRTCLSQRPESKCLGMSL*VVAGRF
Trigger: GAAACGCCCGGCTACCACCAACAGTGACATACCCAA...ACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGGCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCCAAAGGCGACGGCTTaGCGGGCTGTGCGAGTTGCC +
Preference number: 5 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLPKATA*RAVRVA
Trigger: GGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGATGGAGTGTGAGCGCTaGCCAAAGGCGACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRMECER*PKATAL
Trigger: CAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCAT...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCATTGGTGACAGGTGCATaGGGGTTCCGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPLVTGA*GFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTCACCAA...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTACCGGAGCTGGCCTGTTaGAAGAGCCAGCCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVPELAC*KSQPAL
Trigger: CAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTCCGG...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCCCTCCCCTCGAGTCTaGGCCTCTGGCTCAGGCTTA +
Preference number: 5 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAPSPRV*ASGSGL
Trigger: TAAGCCTGAGCCAGAGGCCAAGACTCGAGGGGAGGG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGACCTCAGGTGGGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACACCGGAGGCTCTTTCTaGACTTCTGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RTSGGQRTASECGSVELHTGGSF*TSGLSG
Trigger: GCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGGT...GTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCCCACCTGAGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCCAGCTGGGAGGCCATaGGCTTTCACCGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVPAGRP*AFTGGS
Trigger: AGAGCCTCCGGTGAAAGCCAATGGCCTCCCAGCTGG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCCACCCCCTGGCACTCTaGGGCCCTCGGGGTAAGGGC +
Preference number: 5 (lower is better)
Translates to: YTDILSAVWHRLLLRCLLHPLAL*GPRGKG
Trigger: GCCCTTACCCCGAGGGCCCAAGAGTGCCAGGGGGTG...GAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCGGGTATGGAGGGACCTaGGGGGAGCTGATGGATCGC +
Preference number: 5 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAGYGGT*GELMDR
Trigger: GCGATCCATCAGCTCCCCCAAGGTCCCTCCATACCC...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCAGCTCCACGCGGATGTaGATGAGCTGGTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPSSTRM*MSWFCS
Trigger: ACTGCAGAACCAGCTCATCAACATCCGCGTGGAGCT...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TGGGTGAGGTTGAGATGCCACCTTGTCTGTAGGACCCTCCTTGGCCCAGAGGCTACTCTATGGTGCTGTTaGTCAGGGCCGTGGTCGCCT +
Preference number: 5 (lower is better)
Translates to: WVRLRCHLVCRTLLGPEATLWCC*SGPWSP
Trigger: AGGCGACCACGGCCCTGACAAACAGCACCATAGAGT...AGCCTCTGGGCCAAGGAGGGTCCTACAGACAAGGTGGCATCTCAACCTCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATGATCTCCTTTTGGATTaGCCGGTTCAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHDLLLD*PVQHLI
Trigger: AATGAGGTGCTGAACCGGCAAATCCAAAAGGAGATC...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCCTCTGCCTCTACCTCTaGCCTGGTGGGCACAAGGCT +
Preference number: 5 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGLCLYL*PGGHKA
Trigger: AGCCTTGTGCCCACCAGGCAAGAGGTAGAGGCAGAG...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCAGGGATGAGGACTTaGTCTGGAGTGGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SGNSSREKAEGPRCLQFPSGMRT*SGVESS
Trigger: GGAGCTCTCCACTCCAGACAAAGTCCTCATCCCTGA...GGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CAGGCCCTGGCCCAGGACCACGGTGTGAGTAGTGATGGCTCCAGGGCTGGGCATTTGGCAATGAGTGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QALAQDHGVSSDGSRAGHLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACACTCATTGCCAA...ATGCCCAGCCCTGGAGCCATCACTACTCACACCGTGGTCCTGGGCCAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCAGACGACAGGGGGTTaGCTGGAGGAGCCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLQTTGG*LEEPGK
Trigger: CTTCCCCGGCTCCTCCAGCAAACCCCCTGTCGTCTG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAGGCCTCAGCCAGGGCTaGCAGTCAGAGCTCAGACCC +
Preference number: 5 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVGLSQG*QSELRP
Trigger: GGGTCTGAGCTCTGACTGCAAGCCCTGGCTGAGGCC...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGGGACAGGCACAGGGTaGGGACCTAAAGGCAGTTAC +
Preference number: 5 (lower is better)
Translates to: PGTDLLTAISQAVATQPPGTGTG*GPKGSY
Trigger: GTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGGTTTCTTGGGTGAGGTaGAGATGCCACCTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRVSWVR*RCHLVC
Trigger: ACAGACAAGGTGGCATCTCAACCTCACCCAAGAAAC...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS GCA 90 bp CGGCTGAAACCCATGCCAGCCCGACCTGTAGGGAGACAGTCCTCCTaGCTCCCCAATTCTCAACCCACAATACAGGCTCCTGAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: RLKPMPARPVGRQSS*LPNSQPTIQAPELK
Trigger: TTTCAGCTCAGGAGCCTGTATTGTGGGTTGAGAATTGGGGAGGCAGGAGGACTGTCTCCCTACAGGTCGGGCTGGCATGGGTTTCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp GCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGATGGAGTGTGAGCGCTaGCCAAAGGCGACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: AEDGFRMWLCGASQHWPQMECER*PKATAL
Trigger: CAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCAT...CTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTTGGTGACAGGTGCATaGGGGTTCCGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: PGTDLLTAISQAVATQPPLVTGA*GFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTCACCAA...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCACCGGAGGCTCTTTCTaGACTTCTGGCCTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFTGGSF*TSGLSG
Trigger: GCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGGT...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTCACCCCCTGGCACTCTaGGGCCCTCGGGGTAAGGGC +
Preference number: 5 (lower is better)
Translates to: EPVTVPAMKECRGISRCSHPLAL*GPRGKG
Trigger: GCCCTTACCCCGAGGGCCCAAGAGTGCCAGGGGGTG...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGGCAATTTTGTCAGGGTaGGTGCGTGGTGGGAAACTC +
Preference number: 5 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKAILSG*VRGGKL
Trigger: GAGTTTCCCACCACGCACCAACCCTGACAAAATTGC...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGGCAATTTTGTCAGGGTaGGTGCGTGGTGGGAAACTC +
Preference number: 5 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRAILSG*VRGGKL
Trigger: GAGTTTCCCACCACGCACCAACCCTGACAAAATTGC...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGCTGAAGCCTCTGAGCGGCAACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGCAGTGAATCCTTTTaGTGTCGCAGCTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RLKPLSGNSSREKAEGPRCSESF*CRSFSG
Trigger: CCCAGAAAAGCTGCGACACAAAAAGGATTCACTGCA...CCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTTGCCGCTCAGAGGCTTCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGGCACAACGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRGTTPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCGTTGTGCC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCCATCAGTGGGCGATTTaGTCCGAGGGGGCACAACGC +
Preference number: 5 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSAHQWAI*SEGAQR
Trigger: GCGTTGTGCCCCCTCGGACAAAATCGCCCACTGATG...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCAGGGCTGCCTCCAGGTaGGAGATGTCTACCTCATGG +
Preference number: 5 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGRAASR*EMSTSW
Trigger: CCATGAGGTAGACATCTCCAACCTGGAGGCAGCCCT...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCGGCTCTAGCTCCATTTaGCGAAGCCGGGCAATTTCC +
Preference number: 5 (lower is better)
Translates to: TASECGSVELHSIGLSQGGSSSI*RSRAIS
Trigger: GGAAATTGCCCGGCTTCGCAAAATGGAGCTAGAGCC...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGGCTCTAGCTCCATTTaGCGAAGCCGGGCAATTTCC +
Preference number: 5 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRGSSSI*RSRAIS
Trigger: GGAAATTGCCCGGCTTCGCAAAATGGAGCTAGAGCC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCGCTTGGGGTGGCACATaGCACAGACAGCATGCGGCC +
Preference number: 5 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLAWGGT*HRQHAA
Trigger: GGCCGCATGCTGTCTGTGCAATGTGCCACCCCAAGC...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGTCCTTCCTGCTTGACTaGCCAATGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKSFLLD*PMCPAA
Trigger: AGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGGA...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGTCCTTCCTGCTTGACTaGCCAATGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRSFLLD*PMCPAA
Trigger: AGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGGA...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGGGAGAAAGGGCAGGTTaGGGGTGCTTGAACTGTGAA +
Preference number: 5 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRGERAG*GCLNCE
Trigger: TTCACAGTTCAAGCACCCCAAACCTGCCCTTTCTCC...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CAA 90 bp GACTTCCGAGGGAATGCCCTGCCCCCGGCAAGATGCTTTCTGGGTGAGCTCTGGTTCCTCTCCCCTTCTTaGGATCAAAAAGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: DFRGNALPPARCFLGELWFLSPS*DQKGKG
Trigger: CCCCTTGCCTTTTTGATCCAAAGAAGGGGAGAGGAA...CCAGAGCTCACCCAGAAAGCATCTTGCCGGGGGCAGGGCATTCCCTCGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS TCA 90 bp CGCCTGAGACAGCTCCACGCGGATGTTGATGAGCTGGTTCTGCAGTaGATCCTTTTTGTGTCGCAGCTTTTCTGGGTAGGCGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RLRQLHADVDELVLQ*ILFVSQLFWVGGLA
Trigger: AGCCAGCCCGCCTACCCAGAAAAGCTGCGACACAAAAAGGATTCACTGCAGAACCAGCTCATCAACATCCGCGTGGAGCTGTCTCAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 90 bp CTGAGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAGGGGGATGCTaGCCAGGATACTCTCTTCCTTCTCATCTTTATAGTAGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: LRAALRLPGSSGGGC*PGYSLPSHLYSRRG
Trigger: GCCTCTTCTACTATAAAGATGAGAAGGAAGAGAGTATCCTGGGCAGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS-3UTR CAA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGACACCATGTTGTGGTaGGGTATGTCACTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEDTMLW*GMSLLV
Trigger: CACCAACAGTGACATACCCAACCACAACATGGTGTC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp ACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGCCAGGGCACCTCGGACACCATGTaGTGGTTGGGTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: TASECGSVELHSIGLSQGTSDTM*WLGMSL
Trigger: CAGTGACATACCCAACCACAACATGGTGTCCGAGGT...GCCCTGGCTGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTTGCGCTGGGCAATTTaGTCAGGGTTGGTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGLRWAI*SGLVRG
Trigger: ACCACGCACCAACCCTGACAAAATTGCCCAGCGCAA...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCTTGCGCTGGGCAATTTaGTCAGGGTTGGTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFLRWAI*SGLVRG
Trigger: ACCACGCACCAACCCTGACAAAATTGCCCAGCGCAA...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCAGCCCTGCCCAAGAACATGCCTCTCCCAAAGGCCGGAGAGCAAGTGTGCCACTGCTCCCTCACCACCTaGTTCTGCTCACACAATTTT +
Preference number: 5 (lower is better)
Translates to: PALPKNMPLPKAGEQVCHCSLTT*FCSHNF
Trigger: AAAATTGTGTGAGCAGAACAAGGTGGTGAGGGAGCA...GTGGCACACTTGCTCTCCGGCCTTTGGGAGAGGCATGTTCTTGGGCAGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGTGCTCCCTCACCACCTaGTTCTGCTCACACAATTTT +
Preference number: 5 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWCSLTT*FCSHNF
Trigger: AAAATTGTGTGAGCAGAACAAGGTGGTGAGGGAGCA...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCAGCTCCACGCGGATGTaGATGAGCTGGTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPSSTRM*MSWFCS
Trigger: ACTGCAGAACCAGCTCATCAACATCCGCGTGGAGCT...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGTTCTGGGTGTCCAAATaGAGCTGCTCCCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRFWVSK*SCSQRS
Trigger: TGACCTCTGGGAGCAGCTCAATTTGGACACCCAGAA...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TCATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCCCTCCAGATCTCCTTTaGGATTTGCCGGTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SSPCLWLKQGGQSPPDPSPPDLL*DLPVQH
Trigger: GTGCTGAACCGGCAAATCCAAAAGGAGATCTGGAGG...GCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GTCCCCCATCAGGGAATGTTCCACTGGAGTCACCACAACCCCAGCCAGGGCAAGTGCTTTGTTCATAGTTaGCCTTGGGCTCGTTGGAGC +
Preference number: 5 (lower is better)
Translates to: VPHQGMFHWSHHNPSQGKCFVHS*PWARWS
Trigger: GCTCCAACGAGCCCAAGGCAAACTATGAACAAAGCA...CTTGCCCTGGCTGGGGTTGTGGTGACTCCAGTGGAACATTCCCTGATGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGGCACAACGCCAACTTaGTTGAGAGCTGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GRGRLQNVALWSFTALASGTTPT*LRAACF
Trigger: GAAGCAGGCAGCTCTCAACAAAGTTGGCGTTGTGCC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCCATCAGTGGGCGATTTaGTCCGAGGGGGCACAACGC +
Preference number: 5 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLHQWAI*SEGAQR
Trigger: GCGTTGTGCCCCCTCGGACAAAATCGCCCACTGATG...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCCTCCACGCTCATCTaGACCTTCCCCTCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLSSTLI*TFPSPG
Trigger: TCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGA...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TCCAGGGCTGGGCATGGTGGGTGTGTGGACACTGAGGTATCCACGGTCCTCTGGTTGGCAATGAGTGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SRAGHGGCVDTEVSTVLWLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACACTCATTGCCAA...CCAGAGGACCGTGGATACCTCAGTGTCCACACACCCACCATGCCCAGCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGAGGCTCCCTGTGACTaGGACATTAATGAGGATGGT +
Preference number: 5 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEEAPCD*DINEDG
Trigger: ACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGGGAGAAAGGGCAGGTTaGGGGTGCTTGAACTGTGAA +
Preference number: 5 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRGERAG*GCLNCE
Trigger: TTCACAGTTCAAGCACCCCAAACCTGCCCTTTCTCC...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CAA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCTCTGTAGGACCCTCCTaGGCCCAGAGGCTGATTTCA +
Preference number: 5 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGSVGPS*AQRLIS
Trigger: TGAAATCAGCCTCTGGGCCAAGGAGGGTCCTACAGA...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGGTGTTCCGTCTTTCATaGTGGCTTCCATGCCAGATG +
Preference number: 5 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAVFRLS*WLPCQM
Trigger: CATCTGGCATGGAAGCCACAATGAAAGACGGAACAC...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS-3UTR CAA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGTGGGTATGGAGGGACTaGCATGAAGAGTTGGGACCT +
Preference number: 5 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRWVWRD*HEELGP
Trigger: AGGTCCCAACTCTTCATGCAAGTCCCTCCATACCCA...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS GCA 90 bp CGGAGCTGCTGCACCAGCCGGTCCTGCTCCCTCACCACCTTGTTCTaGTCACACAATTTTCCCAGCAGCTTATCTGTGTCTTGCTCGTTT +
Preference number: 5 (lower is better)
Translates to: RSCCTSRSCSLTTLF*SHNFPSSLSVSCSF
Trigger: AAACGAGCAAGACACAGATAAGCTGCTGGGAAAATTGTGTGAGCAGAACAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCAGCAGCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 90 bp TGGGCGTGGATGCTGTGGAACCAGAGCTGGTGGCTAGGATGGGGCTaGTCAGGCAATATTAAAGGAGAGCTTCCTCTCAAGGCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: WAWMLWNQSWWLGWG*SGNIKGELPLKACK
Trigger: CTTGCAAGCCTTGAGAGGAAGCTCTCCTTTAATATTGCCTGAGCAGCCCCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 90 bp ACCAGATGGGCGTGGATGCTGTGGAACCAGAGCTGGTGGCTAGGATaGGGCTGCTCAGGCAATATTAAAGGAGAGCTTCCTCTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: TRWAWMLWNQSWWLG*GCSGNIKGELPLKA
Trigger: AGCCTTGAGAGGAAGCTCTCCTTTAATATTGCCTGAGCAGCCCCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCATCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 90 bp AGCAAGTCGACCAGATGGGCGTGGATGCTGTGGAACCAGAGCTGGTaGCTAGGATGGGGCTGCTCAGGCAATATTAAAGGAGAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: SKSTRWAWMLWNQSW*LGWGCSGNIKGELP
Trigger: AGGAAGCTCTCCTTTAATATTGCCTGAGCAGCCCCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCATCTGGTCGACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGTGTTCCGTCTTTCATaGTGGCGGCTTCTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GRGRLQNVALWSFTALASVFRLS*WRLLRC
Trigger: ACACCTCAGAAGCCGCCACAATGAAAGACGGAACAC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp AGCACCCATAAGCAAAGCACTGGGTTTGTGTCAAAGCCCTGGGTCCAGCTGAGGTTGGTGACAGGTGCATaGGGGTTCCGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: STHKQSTGFVSKPWVQLRLVTGA*GFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTCACCAA...CCTCAGCTGGACCCAGGGCTTTGACACAAACCCAGTGCTTTGCTTATGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAAGGACGAACCAGCGCTaGTTCCACTGCTTAACCCCG +
Preference number: 5 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVRTNQR*FHCLTP
Trigger: CGGGGTTAAGCAGTGGAACAAGCGCTGGTTCGTCCT...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTTGTTTCCGGCTGATGTaGTCTGAGGGCTGCACTGCG +
Preference number: 5 (lower is better)
Translates to: AEELVGVLGTAGSQAEASCFRLM*SEGCTA
Trigger: CGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACA...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCGCAATTTTGTCAGGGTaGGTGCGTGGTGGGAAACTC +
Preference number: 5 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFAILSG*VRGGKL
Trigger: GAGTTTCCCACCACGCACCAACCCTGACAAAATTGC...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AAGACAAGTCCTTCTCTCTGCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGTGGTTCATGGAGCTCTaGCGCTGGGCAATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: KTSPSLCPLPQDGEADTRWFMEL*RWAILS
Trigger: TGACAAAATTGCCCAGCGCAAGAGCTCCATGAACCA...CCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGCAGAGAGAAGGACTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGTGCAGTGAATCCTTTTaGTGTCGCAGCTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PRMARQTPGTDLLTAISQCSESF*CRSFSG
Trigger: CCCAGAAAAGCTGCGACACAAAAAGGATTCACTGCA...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGGGCAAGGCTGAGGCTCCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCTTCTGGGTGTCCAAATaGAGCTGCTCCCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: RARLRLPVTWTLMRMVLPFWVSK*SCSQRS
Trigger: TGACCTCTGGGAGCAGCTCAATTTGGACACCCAGAA...GGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTCAGCCTTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCCAGGATCTCCTTTTGGATTaGCCGGTTCAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: PRMARQTPGTDLLTAISQDLLLD*PVQHLI
Trigger: AATGAGGTGCTGAACCGGCAAATCCAAAAGGAGATC...CTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCACCTCCAGATCTCCTTTaGGATTTGCCGGTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: GRGRLQNVALWSFTALASPPDLL*DLPVQH
Trigger: GTGCTGAACCGGCAAATCCAAAAGGAGATCTGGAGG...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGGGGTCTTTCTTGCTTaGTTCATAGTTTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEGVFLA*FIVCLG
Trigger: CCCAAGGCAAACTATGAACAAAGCAAGAAAGACCCC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TGGGTAGGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCAGGGCTGCCTCCAGGTaGGAGATGTCTACCTCATGG +
Preference number: 5 (lower is better)
Translates to: WVGKAPRLTTPYIRQVLLRAASR*EMSTSW
Trigger: CCATGAGGTAGACATCTCCAACCTGGAGGCAGCCCT...GAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCTCAGGGATGAGGACTTaGTCTGGAGTGGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSASGMRT*SGVESS
Trigger: GGAGCTCTCCACTCCAGACAAAGTCCTCATCCCTGA...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCATTGGCAATGAGTGTCTaGATCCTCTCCACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPLAMSV*ILSTFF
Trigger: GAAGAAGGTGGAGAGGATCAAGACACTCATTGCCAA...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAAGCCACTGTGGCAGAGGGACAGGCACAGGGTTGGGACCTAAAGGCAGTTACCGAGGCTCCCTGTGACTaGGACATTAATGAGGATGGT +
Preference number: 5 (lower is better)
Translates to: EATVAEGQAQGWDLKAVTEAPCD*DINEDG
Trigger: ACCATCCTCATTAATGTCCAAGTCACAGGGAGCCTC...GGTAACTGCCTTTAGGTCCCAACCCTGTGCCTGTCCCTCTGCCACAGTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTCCATCTCTCATCACCTaGTCTTTGGCTCAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRPSLIT*SLAQAG
Trigger: CCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGG...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAGCAGAGGAGACAGTCTGGCACTGCACTGGGCACTAACCTAAGGCTCCACCGGCTGCATGGGTCTCCTTaGTGCATACAACTGCAAACA +
Preference number: 5 (lower is better)
Translates to: EQRRQSGTALGTNLRLHRLHGSP*CIQLQT
Trigger: TGTTTGCAGTTGTATGCACAAAGGAGACCCATGCAG...CCGGTGGAGCCTTAGGTTAGTGCCCAGTGCAGTGCCAGACTGTCTCCTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGAAGTCCCGGGGGTTTCTaGGGTGAGGTTGAGATGCCA +
Preference number: 5 (lower is better)
Translates to: TLARSSALDSQALDFRPRSPGGF*GEVEMP
Trigger: TGGCATCTCAACCTCACCCAAGAAACCCCCGGGACT...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp CATCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGGAGGTAATGTGCTCATaGAGAAGGCCCTGGATGAAT +
Preference number: 5 (lower is better)
Translates to: HHLVFGSSRVVSLHRTPAEVMCS*RRPWMN
Trigger: ATTCATCCAGGGCCTTCTCAATGAGCACATTACCTC...CGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp TCACCTTGTCTTTGGCTCAAGCAGGGTGGTCAGTCTCCACCGGACCCCAGCGAGGCAGCCTCTTGGTTATaGATCATGGAGGTAATGTGC +
Preference number: 5 (lower is better)
Translates to: SPCLWLKQGGQSPPDPSEAASWL*IMEVMC
Trigger: GCACATTACCTCCATGATCAATAACCAAGAGGCTGC...CTCGCTGGGGTCCGGTGGAGACTGACCACCCTGCTTGAGCCAAAGACAAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS GCA 90 bp TGTCTGAGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAGGGGGATaGTGCCCAGGATACTCTCTTCCTTCTCATCTTTATAGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: CLRAALRLPGSSGGG*CPGYSLPSHLYSRR
Trigger: TCTTCTACTATAAAGATGAGAAGGAAGAGAGTATCCTGGGCAGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 90 bp ACCTCATTCTGGGTGTCCAAATTGAGCTGCTCCCAGAGGTCATCGTaGAGGGCAGAGACCTCAGACTCGAGGTGCTCATACTCTATGGTG +
Preference number: 5 (lower is better)
Translates to: TSFWVSKLSCSQRSS*RAETSDSRCSYSMV
Trigger: CACCATAGAGTATGAGCACCTCGAGTCTGAGGTCTCTGCCCTGCACGATGACCTCTGGGAGCAGCTCAATTTGGACACCCAGAATGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 90 bp TGTCTTAGGATCCTTGGACTGCAAGGGCCTTCCGAAGGTCATCGCTaGCATCCCCCTGCTTCTAGGCAAGCCTGTTCTCCAATCAATCCT +
Preference number: 5 (lower is better)
Translates to: CLRILGLQGPSEGHR*HPPASRQACSPINP
Trigger: AGGATTGATTGGAGAACAGGCTTGCCTAGAAGCAGGGGGATGGCAGCGATGACCTTCGGAAGGCCCTTGCAGTCCAAGGATCCTAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 90 bp CTAGGTGCCCTAGTAGGCCTGTGGCTTCCTGGTATTCGGCCAGAATaGTACTGGTCAGAGGACTGGAGGCAGAATAAACAAGGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: LGALVGLWLPGIRPE*YWSEDWRQNKQGGD
Trigger: ATCCCCTCCTTGTTTATTCTGCCTCCAGTCCTCTGACCAGTAGCATTCTGGCCGAATACCAGGAAGCCACAGGCCTACTAGGGCACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 90 bp AGAAGCAAGTCGACCAGATGGGCGTGGATGCTGTGGAACCAGAGCTaGTGGCTAGGATGGGGCTGCTCAGGCAATATTAAAGGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: RSKSTRWAWMLWNQS*WLGWGCSGNIKGEL
Trigger: AAGCTCTCCTTTAATATTGCCTGAGCAGCCCCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCATCTGGTCGACTTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCAGACACCATGTTGTGGTaGGGTATGTCACTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GRGRLQNVALWSFTALASDTMLW*GMSLLV
Trigger: CACCAACAGTGACATACCCAACCACAACATGGTGTC...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGATGGAGTGTGAGCGCTaGCCAAAGGCGACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGMECER*PKATAL
Trigger: CAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCAT...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp GCAGAGGAATTAGTAGGTGTTCTTGGGACCGCTGGAAGTCAGGCTGAAGCCTCTAGCTCCACGCGGATGTaGATGAGCTGGTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AEELVGVLGTAGSQAEASSSTRM*MSWFCS
Trigger: ACTGCAGAACCAGCTCATCAACATCCGCGTGGAGCT...AGAGGCTTCAGCCTGACTTCCAGCGGTCCCAAGAACACCTACTAATTCCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTGGGGTCTTTCTTGCTTaGTTCATAGTTTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: PGTDLLTAISQAVATQPPGVFLA*FIVCLG
Trigger: CCCAAGGCAAACTATGAACAAAGCAAGAAAGACCCC...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAGGCTCTAGCTCCATTTaGCGAAGCCGGGCAATTTCC +
Preference number: 5 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVGSSSI*RSRAIS
Trigger: GGAAATTGCCCGGCTTCGCAAAATGGAGCTAGAGCC...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTGCTTGGGGTGGCACATaGCACAGACAGCATGCGGCC +
Preference number: 5 (lower is better)
Translates to: EPVTVPAMKECRGISRCSAWGGT*HRQHAA
Trigger: GGCCGCATGCTGTCTGTGCAATGTGCCACCCCAAGC...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGTAGGGTGGGGCTGACGAGGATAGGGATGATGACAAGTGCTGTCCTTGGTGTCCCATCTCTCATCACCTaGTCTTTGGCTCAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SRVGLTRIGMMTSAVLGVPSLIT*SLAQAG
Trigger: CCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGG...GACACCAAGGACAGCACTTGTCATCATCCCTATCCTCGTCAGCCCCACCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCCCATCTCTCATCACCTaGTCTTTGGCTCAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPPSLIT*SLAQAG
Trigger: CCCTGCTTGAGCCAAAGACAAGGTGATGAGAGATGG...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCTCCTTCCTGCTTGACTaGCCAATGTGTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSASFLLD*PMCPAA
Trigger: AGCAGCAGGACACATTGGCAAGTCAAGCAGGAAGGA...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GCCCCTTACCCCAGGATGGCGAGGCAGACACCAGGCACAGACCTACTAACAGCCATCTCCTCACCTCATTaGCCAATTCCATTCAGACAT +
Preference number: 5 (lower is better)
Translates to: APYPRMARQTPGTDLLTAISSPH*PIPFRH
Trigger: ATGTCTGAATGGAATTGGCAAATGAGGTGAGGAGAT...GGCTGTTAGTAGGTCTGTGCCTGGTGTCTGCCTCGCCATCCTGGGGTAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp CCCTGTGACTTGGACATTAATGAGGATGGTGCTCCCCACTGTCATCTCAGGCCCGGATGCTACAGCTGTTaGTCCCCTGACAGAGATTCC +
Preference number: 5 (lower is better)
Translates to: PCDLDINEDGAPHCHLRPGCYSC*SPDRDS
Trigger: GGAATCTCTGTCAGGGGACAAACAGCTGTAGCATCC...GGGCCTGAGATGACAGTGGGGAGCACCATCCTCATTAATGTCCAAGTCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp GGCCCACTGCACATTCCAGGGGGAACAGGGCAAGAAATATCATGGAACTGGGTAAGGGAGAGGATGCTGTaGTGGTTACTGCAGGATCCA +
Preference number: 5 (lower is better)
Translates to: GPLHIPGGTGQEISWNWVRERML*WLLQDP
Trigger: TGGATCCTGCAGTAACCACAACAGCATCCTCTCCCT...TACCCAGTTCCATGATATTTCTTGCCCTGTTCCCCCTGGAATGTGCAGTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp GGCAGAGGACGGCTTCAGAATGTGGCTCTGTGGAGCTTCACAGCATTGGCCTCATGCTCCCTCACCACCTaGTTCTGCTCACACAATTTT +
Preference number: 5 (lower is better)
Translates to: GRGRLQNVALWSFTALASCSLTT*FCSHNF
Trigger: AAAATTGTGTGAGCAGAACAAGGTGGTGAGGGAGCA...TGAGGCCAATGCTGTGAAGCTCCACAGAGCCACATTCTGAAGCCGTCCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCCTCCTCTCTGGCTACATTCGTGATCTCCTTTTGGATTaGCCGGTTCAGCACCTCATT +
Preference number: 5 (lower is better)
Translates to: EGPRCLQFPSFLLSGYIRDLLLD*PVQHLI
Trigger: AATGAGGTGCTGAACCGGCAAATCCAAAAGGAGATC...ACGAATGTAGCCAGAGAGGAGGAAGGAGGGAAACTGAAGACACCGTGGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTTTGCCTTGGGCTCGTaGGAGCCAGGCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: YEPVTVPAMKECRGISRCFALGS*EPGLVG
Trigger: CCCCACCAAGCCTGGCTCCAACGAGCCCAAGGCAAA...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS-3UTR CAA 90 bp GTTCCCTCTGGGAGCCAATGGCCTCTCCCCATCTCTCATCACCTTGTCTTTGGCGGGGTCTTTCTTGCTTaGTTCATAGTTTGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: VPSGSQWPLPISHHLVFGGVFLA*FIVCLG
Trigger: CCCAAGGCAAACTATGAACAAAGCAAGAAAGACCCC...GCCAAAGACAAGGTGATGAGAGATGGGGAGAGGCCATTGGCTCCCAGAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTGGAAACACAGCACTCTaGGGGCGTTCCTGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: EPVTVPAMKECRGISRCSGNTAL*GRSWEE
Trigger: CTCCTCCCAGGAACGCCCCAAGAGTGCTGTGTTTCC...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTCACCCAGATCCCCACACCATTCTGCATACTGGATTaGGCAATGAGTGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: SHLPGSRYSTPFTQIPTPFCILD*AMSVLI
Trigger: GATCAAGACACTCATTGCCAAATCCAGTATGCAGAA...TGGTGTGGGGATCTGGGTGAAGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 90 bp CTGTGGCTTCCTGGTATTCGGCCAGAATGCTACTGGTCAGAGGACTaGAGGCAGAATAAACAAGGAGGGGATGATATCCTCCCCATTCAG +
Preference number: 5 (lower is better)
Translates to: LWLPGIRPECYWSED*RQNKQGGDDILPIQ
Trigger: CTGAATGGGGAGGATATCATCCCCTCCTTGTTTATTCTGCCTCCAGTCCTCTGACCAGTAGCATTCTGGCCGAATACCAGGAAGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp ACGCTGGCCAGGAGCTCTGCTCTAGATTCCCAAGCCCTTGATTTCAGACCTAGAGACACCATGTTGTGGTaGGGTATGTCACTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TLARSSALDSQALDFRPRDTMLW*GMSLLV
Trigger: CACCAACAGTGACATACCCAACCACAACATGGTGTC...TCTAGGTCTGAAATCAAGGGCTTGGGAATCTAGAGCAGAGCTCCTGGCCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTAGGACGAACCAGCGCTaGTTCCACTGCTTAACCCCG +
Preference number: 5 (lower is better)
Translates to: EPVTVPAMKECRGISRCSRTNQR*FHCLTP
Trigger: CGGGGTTAAGCAGTGGAACAAGCGCTGGTTCGTCCT...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTTGTTTCCGGCTGATGTaGTCTGAGGGCTGCACTGCG +
Preference number: 5 (lower is better)
Translates to: EPVTVPAMKECRGISRCSCFRLM*SEGCTA
Trigger: CGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACA...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGTAAGGCCCCAAGGCTGACCACACCCTACATAAGACAAGTCCTTCTCTCTGCCTGCAGTGAATCCTTTTaGTGTCGCAGCTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GKAPRLTTPYIRQVLLSACSESF*CRSFSG
Trigger: CCCAGAAAAGCTGCGACACAAAAAGGATTCACTGCA...GGCAGAGAGAAGGACTTGTCTTATGTAGGGTGTGGTCAGCCTTGGGGCCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTCATCAGTGGGCGATTTaGTCCGAGGGGGCACAACGC +
Preference number: 5 (lower is better)
Translates to: YEPVTVPAMKECRGISRCHQWAI*SEGAQR
Trigger: GCGTTGTGCCCCCTCGGACAAAATCGCCCACTGATG...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp ACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTTCAGGGATGAGGACTTaGTCTGGAGTGGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TLTSLVLFGIGCCYAVCSSGMRT*SGVESS
Trigger: GGAGCTCTCCACTCCAGACAAAGTCCTCATCCCTGA...AGAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp CCAGGCACAGACCTACTAACAGCCATCTCCCAGGCAGTCGCTACTCAACCCCCTTTCTGCATACTGGATTaGGCAATGAGTGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: PGTDLLTAISQAVATQPPFCILD*AMSVLI
Trigger: GATCAAGACACTCATTGCCAAATCCAGTATGCAGAA...AGGGGGTTGAGTAGCGACTGCCTGGGAGATGGCTGTTAGTAGGTCTGTGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGCTTGGGGTGGCACATaGCACAGACAGCATGCGGCC +
Preference number: 5 (lower is better)
Translates to: SSLLAYEPVTVPAMKECRAWGGT*HRQHAA
Trigger: GGCCGCATGCTGTCTGTGCAATGTGCCACCCCAAGC...TCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp AACTCTAGCAGAGAGAAGGCCGAGGGGCCACGGTGTCTTCAGTTTCCCTCCTTCTTTGACTGCAGCCTCTaGGTTATTGATCATGGAGGT +
Preference number: 5 (lower is better)
Translates to: NSSREKAEGPRCLQFPSFFDCSL*VIDHGG
Trigger: ACCTCCATGATCAATAACCAAGAGGCTGCAGTCAAA...GAAGGAGGGAAACTGAAGACACCGTGGCCCCTCGGCCTTCTCTCTGCTAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS GCA 90 bp GGGCAGGAGGTGTGTCCACTCTGGATGGGTGACTTTGTTCCAGGGTaGACCCAGCTGGTTGACTTTTCCTCATCATTGATGAAGAAGATT +
Preference number: 5 (lower is better)
Translates to: GQEVCPLWMGDFVPG*TQLVDFSSSLMKKI
Trigger: AATCTTCTTCATCAATGATGAGGAAAAGTCAACCAGCTGGGTGCACCCTGGAACAAAGTCACCCATCCAGAGTGGACACACCTCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564627.2
CDS-3UTR CAA 90 bp CCTAAAGGGGAAAGGAATTGGTTCCCTCTTGCCGTAGCCAGCCCTGCCCAAGAATTCCCACCTGTTTTATaGGACATGTCCAAGGTCGAT +
Preference number: 5 (lower is better)
Translates to: PKGERNWFPLAVASPAQEFPPVL*DMSKVD
Trigger: ATCGACCTTGGACATGTCCAATAAAACAGGTGGGAA...TTCTTGGGCAGGGCTGGCTACGGCAAGAGGGAACCAATTCCTTTCCCCTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp TACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCACCTCGGACACCATGTaGTGGTTGGGTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: YTDILSAVWHRLLLRCLLTSDTM*WLGMSL
Trigger: CAGTGACATACCCAACCACAACATGGTGTCCGAGGT...GAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTGTTTCCGGCTGATGTaGTCTGAGGGCTGCACTGCG +
Preference number: 5 (lower is better)
Translates to: YEPVTVPAMKECRGISRCCFRLM*SEGCTA
Trigger: CGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACA...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp GGGTCATCAGGAGCAGACAGTGTAATAAAATCCTTAGGCCAGGACTTCCGAGGGTGGTTCATGGAGCTCTaGCGCTGGGCAATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GSSGADSVIKSLGQDFRGWFMEL*RWAILS
Trigger: TGACAAAATTGCCCAGCGCAAGAGCTCCATGAACCA...CCCTCGGAAGTCCTGGCCTAAGGATTTTATTACACTGTCTGCTCCTGATGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS-3UTR CAA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTTGGGTATGTCACTGTaGGTGGTAGCCGGGCGTTTC +
Preference number: 5 (lower is better)
Translates to: YEPVTVPAMKECRGISRCLGMSL*VVAGRF
Trigger: GAAACGCCCGGCTACCACCAACAGTGACATACCCAA...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCGGCTGCTGGTGGTGCTaGCTGGGTGGGACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAGCWWC*LGGTFS
Trigger: GGAGAACGTCCCACCCAGCAAGCACCACCAGCAGCC...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CAA 90 bp GAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTCTTTCTGGGTGTCCAAATaGAGCTGCTCCCAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: EPVTVPAMKECRGISRCSFWVSK*SCSQRS
Trigger: TGACCTCTGGGAGCAGCTCAATTTGGACACCCAGAA...AGAACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS-3UTR CAA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCAGACGACAGGGGGTTaGCTGGAGGAGCCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAQTTGG*LEEPGK
Trigger: CTTCCCCGGCTCCTCCAGCAAACCCCCTGTCGTCTG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CAA 90 bp TATGAACCAGTAACTGTCCCAGCCATGAAGGAGTGCAGAGGAATTAGTAGGTGTTGGGGAGGGGGCTCATaGGCTAGAAAGATGCTAAGG +
Preference number: 5 (lower is better)
Translates to: YEPVTVPAMKECRGISRCWGGGS*ARKMLR
Trigger: CCTTAGCATCTTTCTAGCCAATGAGCCCCCTCCCCA...ACACCTACTAATTCCTCTGCACTCCTTCATGGCTGGGACAGTTACTGGTTCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS TCA 90 bp ACAGTCCTCCTGCCTCCCCAATTCTCAACCCACAATACAGGCTCCTaGGCTGAAAATCAACTTGCTTCTCAGAGATCCTTCAGATCCTGT +
Preference number: 5 (lower is better)
Translates to: TVLLPPQFSTHNTGS*AENQLASQRSFRSC
Trigger: ACAGGATCTGAAGGATCTCTGAGAAGCAAGTTGATTTTCAGCTCAGGAGCCTGTATTGTGGGTTGAGAATTGGGGAGGCAGGAGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCAGGACGAACCAGCGCTaGTTCCACTGCTTAACCCCG +
Preference number: 5 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPARTNQR*FHCLTP
Trigger: CGGGGTTAAGCAGTGGAACAAGCGCTGGTTCGTCCT...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CAA 90 bp TACACTGACATCCTTAGTGCTGTTTGGCATAGGCTGCTGTTACGCTGTCTGCTCTTCTGCATACTGGATTaGGCAATGAGTGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: YTDILSAVWHRLLLRCLLFCILD*AMSVLI
Trigger: GATCAAGACACTCATTGCCAAATCCAGTATGCAGAA...GAGCAGACAGCGTAACAGCAGCCTATGCCAAACAGCACTAAGGATGTCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS CCA 90 bp TTTATGGCTGAAAATCTTCCCAGACACGAGATGATACATTCCAGCTaGGGACTGTCAGATCTGCTCAGAAGCAAGGAGGTTTGTATCGAT +
Preference number: 5 (lower is better)
Translates to: FMAENLPRHEMIHSS*GLSDLLRSKEVCID
Trigger: ATCGATACAAACCTCCTTGCTTCTGAGCAGATCTGACAGTCCCCAGCTGGAATGTATCATCTCGTGTCTGGGAAGATTTTCAGCCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS-3UTR CAA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCACCTCGGACACCATGTaGTGGTTGGGTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPATSDTM*WLGMSL
Trigger: CAGTGACATACCCAACCACAACATGGTGTCCGAGGT...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CAA 90 bp TTGTTGAGTAAATTGTCATCTTTACTTGCATATGAACCAGTAACTGTCCCAGCCCCTCCAGATCTCCTTTaGGATTTGCCGGTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLSKLSSLLAYEPVTVPAPPDLL*DLPVQH
Trigger: GTGCTGAACCGGCAAATCCAAAAGGAGATCTGGAGG...GGCTGGGACAGTTACTGGTTCATATGCAAGTAAAGATGACAATTTACTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000637508.1
CDS-3UTR CAA 90 bp AGAGAGGGATCAAGTGAAAAGGAGTGTGACAAGTCCAAGGAACTTGTATGTGTCACAAGTCCAAGGAACTaGTATGTGTCTGTGCTACAG +
Preference number: 5 (lower is better)
Translates to: REGSSEKECDKSKELVCVTSPRN*YVSVLQ
Trigger: CTGTAGCACAGACACATACAAGTTCCTTGGACTTGT...GACACATACAAGTTCCTTGGACTTGTCACACTCCTTTTCACTTGATCCCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272203.8
CDS TCA 90 bp AGGCTCCAGACCCACTGCTATCTTATCCTGCCAAGATGTTCTTTTTaGTATCACGTTTCAGTTCCTCTGGCTTTCTATATTATTCCATTT +
Preference number: 5 (lower is better)
Translates to: RLQTHCYLILPRCSF*YHVSVPLAFYIIPF
Trigger: AAATGGAATAATATAGAAAGCCAGAGGAACTGAAACGTGATATCAAAAAGAACATCTTGGCAGGATAAGATAGCAGTGGGTCTGGAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 72 bp CCGGGGTGTCTCGTAGGCATGCCCGCCAGGCTCCTCTaGCCGCAGGGCTGCCTCCAGGTTGGAGATGTCTAC +
Preference number: 6 (lower is better)
Translates to: PGCLVGMPARLL*PQGCLQVGDVY
Trigger: GTAGACATCTCCAACCTGGAGGCAGCCCTGCGGGCAGAGGAGCCTGGCGGGCATGCCTACGAGACACCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 72 bp GCCGAGGCGGGCCAGGTTCCTCGTTGGAGCCAGGCTTaGTGGGGGACCCCTGAGAGCCCGACACCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: AEAGQVPRWSQA*WGTPESPTPVK
Trigger: TTTCACTGGTGTCGGGCTCTCAGGGGTCCCCCACCAAGCCTGGCTCCAACGAGGAACCTGGCCCGCCTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS TCA 72 bp GGGAAACTCCGCCGGTGTCCCCCAGTCTCTCCATCCTaGGACGGGAAAGCTGTGCTCCCTGGCCGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GKLRRCPPVSPS*DGKAVLPGRLG
Trigger: CCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTCAGGATGGAGAGACTGGGGGACACCGGCGGAGTTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp TCATGGAGTGTGAGCGCTTGCCAAAGGCGACGGCTTTaGGGGCTGTGCGAGTTGCCCGGACGCTGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: SWSVSACQRRRL*GLCELPGRWAA
Trigger: AGCGGCCCAGCGTCCGGGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GCGGGCTGTGCGAGTTGCCCGGACGCTGGGCCGCTCTaGAGGGACCTCGGACACCATGTTGTGGTTGGGTAT +
Preference number: 6 (lower is better)
Translates to: AGCASCPDAGPL*RDLGHHVVVGY
Trigger: ATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAGCGTCCGGGCAACTCGCACAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GGAGGGATCTGTACTCGAGCAGCCTCCCCCATGGCCTaGATCCAGGCCTCTTGCTCCTCGGGGCTCTCGGCA +
Preference number: 6 (lower is better)
Translates to: GGICTRAASPMA*IQASCSSGLSA
Trigger: TGCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCCAGGCCATGGGGGAGGCTGCTCGAGTACAGATCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000485632.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GCCTCGGCCATCACCCTCCCCTCGAGTCTTGGCCTCTaGCTCAGGCTTAGGGAGGCTGTTGTGGGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: ASAITLPSSLGL*LRLREAVVGWL
Trigger: CAGCCACCCCACAACAGCCTCCCTAAGCCTGAGCCAGAGGCCAAGACTCGAGGGGAGGGTGATGGCCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GACGGGAAAGCTGTGCTCCCTGGCCGGCTTGGGGAGTaGTACTGCCAGCCATTGGGCTGGGCAGGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: DGKAVLPGRLGE*YCQPLGWAGCS
Trigger: GGAACAGCCTGCCCAGCCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp CCTCACTGCGAGGTGGCAGCCGCTCAAAACGGGCACTaGGTGAGCGGACAGGGGAGTAAATGCGGGCACGGC +
Preference number: 6 (lower is better)
Translates to: PHCEVAAAQNGH*VSGQGSKCGHG
Trigger: GCCGTGCCCGCATTTACTCCCCTGTCCGCTCACCCAGTGCCCGTTTTGAGCGGCTGCCACCTCGCAGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CAA 72 bp TTCATGGAGTGTGAGCGCTTGCCAAAGGCGACGGCTTaGCGGGCTGTGCGAGTTGCCCGGACGCTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: FMECERLPKATA*RAVRVARTLGR
Trigger: GCGGCCCAGCGTCCGGGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCATGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS TCA 72 bp GGATCCAGGCCTCTTGCTCCTCGGGGCTCTCGGCACTaGAGAAGTAGGTGCGGACCCCGGCATGCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: GSRPLAPRGSRH*RSRCGPRHAQP
Trigger: AGGCTGAGCATGCCGGGGTCCGCACCTACTTCTTCAGTGCCGAGAGCCCCGAGGAGCAAGAGGCCTGGATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000485632.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GGCCTCTGGCTCAGGCTTAGGGAGGCTGTTGTGGGGTaGCTGCTGGTGGTGCTTGCTGGGTGGGACGTTCTC +
Preference number: 6 (lower is better)
Translates to: GLWLRLREAVVG*LLVVLAGWDVL
Trigger: GAGAACGTCCCACCCAGCAAGCACCACCAGCAGCCACCCCACAACAGCCTCCCTAAGCCTGAGCCAGAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS TCA 72 bp AGGCATGGCGCTTGTCCTCCAGGGCCCAGGGCGGGCTaGTCCGATCATAGGCCGGCATGGAACAGATGCTCT +
Preference number: 6 (lower is better)
Translates to: RHGACPPGPRAG*SDHRPAWNRCS
Trigger: AGAGCATCTGTTCCATGCCGGCCTATGATCGGATCAGCCCGCCCTGGGCCCTGGAGGACAAGCGCCATGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS TCA 72 bp ACTGCGAGGTGGCAGCCGCTCAAAACGGGCACTGGGTaGGCGGACAGGGGAGTAAATGCGGGCACGGCTGTA +
Preference number: 6 (lower is better)
Translates to: TARWQPLKTGTG*ADRGVNAGTAV
Trigger: TACAGCCGTGCCCGCATTTACTCCCCTGTCCGCTCACCCAGTGCCCGTTTTGAGCGGCTGCCACCTCGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp CTGCCTCCAGGTTGGAGATGTCTACCTCATGGATGCTaGGGTGGCGGCGCACCACTTTGTAGGCTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: LPPGWRCLPHGC*GGGAPLCRLAG
Trigger: CCCGGCCAGCCTACAAAGTGGTGCGCCGCCACCGCAGCATCCATGAGGTAGACATCTCCAACCTGGAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp GGGCTGCCTCCAGGTTGGAGATGTCTACCTCATGGATaGTGCGGTGGCGGCGCACCACTTTGTAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: GLPPGWRCLPHG*CGGGAPLCRLA
Trigger: GGCCAGCCTACAAAGTGGTGCGCCGCCACCGCAGCATCCATGAGGTAGACATCTCCAACCTGGAGGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp GGCTTGCAGTCAGAGCTCAGACCCGCATGGTATAGCTaGTGTCGGCGCCCCGTGGGGATTCAGACGACAGGG +
Preference number: 6 (lower is better)
Translates to: GLQSELRPAWYS*CRRPVGIQTTG
Trigger: CCCTGTCGTCTGAATCCCCACGGGGCGCCGACAGCAGCTATACCATGCGGGTCTGAGCTCTGACTGCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 72 bp TCATGGCTGTGCCGCACAGCTTGGGGCACTGACTTCTaGGCTGGAGGGATCTGTACTCGAGCAGCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SWLCRTAWGTDF*AGGICTRAASP
Trigger: GGGGGAGGCTGCTCGAGTACAGATCCCTCCAGCCCAGAAGTCAGTGCCCCAAGCTGTGCGGCACAGCCATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GGAGGCTGTTGTGGGGTGGCTGCTGGTGGTGCTTGCTaGGTGGGACGTTCTCCGAGTCTGGCTTCTCATGGC +
Preference number: 6 (lower is better)
Translates to: GGCCGVAAGGAC*VGRSPSLASHG
Trigger: GCCATGAGAAGCCAGACTCGGAGAACGTCCCACCCAGCAAGCACCACCAGCAGCCACCCCACAACAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp TCAGACCCGCATGGTATAGCTGCTGTCGGCGCCCCGTaGGGATTCAGACGACAGGGGGTTTGCTGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: SDPHGIAAVGAP*GFRRQGVCWRS
Trigger: GCTCCTCCAGCAAACCCCCTGTCGTCTGAATCCCCACGGGGCGCCGACAGCAGCTATACCATGCGGGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CAA 90 bp GTTGCCCGGACGCTGGGCCGCTCTGGAGGGACCTCGGACACCATGTaGTGGTTGGGTATGTCACTGTTGGTGGTAGCCGGGCGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: VARTLGRSGGTSDTM*WLGMSLLVVAGRFP
Trigger: TGGGAAACGCCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAGCGTCCGGGCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp CGGACCCCGGCATGCTCAGCCTTAAACGTGTGTTTCCGGCTGATGTaGTCTGAGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: RTPACSALNVCFRLM*SEGCTAATRKLRRG
Trigger: CCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGCTGAGCATGCCGGGGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp CGGACGCTGGGCCGCTCTGGAGGGACCTCGGACACCATGTTGTGGTaGGGTATGTCACTGTTGGTGGTAGCCGGGCGTTTCCCACCTGTT +
Preference number: 6 (lower is better)
Translates to: RTLGRSGGTSDTMLW*GMSLLVVAGRFPPV
Trigger: AACAGGTGGGAAACGCCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAGCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000564627.2
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp TTGGTGACAGGTGCATTGGGGTTCCGCTTCATGGAGTGTGAGCGCTaGCCAAAGGCGACGGCTTTGCGGGCTGTGCGAGTTGCCCGGACG +
Preference number: 6 (lower is better)
Translates to: LVTGALGFRFMECER*PKATALRAVRVART
Trigger: CGTCCGGGCAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCAATGCACCTGTCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp GCACTTTCCAGGCTCTCCTTCTCAGCTCGGAGCTGCTaGACCAGCCGGTCCTGCTCCCTCACCACCTTGTTC +
Preference number: 6 (lower is better)
Translates to: ALSRLSFSARSC*TSRSCSLTTLF
Trigger: GAACAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGAGAAGGAGAGCCTGGAAAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp AAGGCACTTTCCAGGCTCTCCTTCTCAGCTCGGAGCTaGTGCACCAGCCGGTCCTGCTCCCTCACCACCTTG +
Preference number: 6 (lower is better)
Translates to: KALSRLSFSARS*CTSRSCSLTTL
Trigger: CAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGAGAAGGAGAGCCTGGAAAGTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp GTCCCTCCGACTTGCTCCCCTCAGACAGCACGGGGTTaGTTTCCCTCCCTGTGTGGCAGTCCTACCGATGAG +
Preference number: 6 (lower is better)
Translates to: VPPTCSPQTARG*FPSLCGSPTDE
Trigger: CTCATCGGTAGGACTGCCACACAGGGAGGGAAAGCAACCCCGTGCTGTCTGAGGGGAGCAAGTCGGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 72 bp TGGACGGGTGAAGGAGTCTGGGGCTGCATTCCCATCTaGACGGCTGAAACCCATGCCAGCCCGACCTGTAGG +
Preference number: 6 (lower is better)
Translates to: WTGEGVWGCIPI*TAETHASPTCR
Trigger: CCTACAGGTCGGGCTGGCATGGGTTTCAGCCGTGCAGATGGGAATGCAGCCCCAGACTCCTTCACCCGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp CTGGGCCGCTCTGGAGGGACCTCGGACACCATGTTGTaGTTGGGTATGTCACTGTTGGTGGTAGCCGGGCGT +
Preference number: 6 (lower is better)
Translates to: LGRSGGTSDTML*LGMSLLVVAGR
Trigger: ACGCCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000564627.2
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp AGTCTCTCCATCCTGAGACGGGAAAGCTGTGCTCCCTaGCCGGCTTGGGGAGTGGTACTGCCAGCCATTGGG +
Preference number: 6 (lower is better)
Translates to: SLSILRRESCAP*PAWGVVLPAIG
Trigger: CCCAATGGCTGGCAGTACCACTCCCCAAGCCGGCCAGGGAGCACAGCTTTCCCGTCTCAGGATGGAGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GCTCTTGCGCTGGGCAATTTTGTCAGGGTTGGTGCGTaGTGGGAAACTCCGCCGGTGTCCCCCAGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: ALALGNFVRVGA*WETPPVSPSLS
Trigger: GGAGAGACTGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp CAGCTCATCATAATAGACTGGCTGCCGGGAGGGGCTTaGGATCCAGACGGTGGCATCCTGCCGCCCGTAGCT +
Preference number: 6 (lower is better)
Translates to: QLIIIDWLPGGA*DPDGGILPPVA
Trigger: AGCTACGGGCGGCAGGATGCCACCGTCTGGATCCCAAGCCCCTCCCGGCAGCCAGTCTATTATGATGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 72 bp GGAGCTAGAGGCGGCATCCAGCTCATCATAATAGACTaGCTGCCGGGAGGGGCTTGGGATCCAGACGGTGGC +
Preference number: 6 (lower is better)
Translates to: GARGGIQLIIID*LPGGAWDPDGG
Trigger: GCCACCGTCTGGATCCCAAGCCCCTCCCGGCAGCCAGTCTATTATGATGAGCTGGATGCCGCCTCTAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CAA 72 bp ACGCTGGGCCGCTCTGGAGGGACCTCGGACACCATGTaGTGGTTGGGTATGTCACTGTTGGTGGTAGCCGGG +
Preference number: 6 (lower is better)
Translates to: TLGRSGGTSDTM*WLGMSLLVVAG
Trigger: CCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGAGCGGCCCAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000564627.2
ENST00000637508.1
ENST00000672625.1
CDS CAA 72 bp ACCCCGGAGCTGGCCTGTTTGAAGAGCCAGCCCGCCTaGGTGACAGGTGCATTGGGGTTCCGCTTCATGGAG +
Preference number: 6 (lower is better)
Translates to: TPELACLKSQPA*VTGALGFRFME
Trigger: CTCCATGAAGCGGAACCCCAATGCACCTGTCACCAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTCCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp GAGCTGGCCTGTTTGAAGAGCCAGCCCGCCTTGGTGACAGGTGCATaGGGGTTCCGCTTCATGGAGTGTGAGCGCTTGCCAAAGGCGACG +
Preference number: 6 (lower is better)
Translates to: ELACLKSQPALVTGA*GFRFMECERLPKAT
Trigger: CGTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCAATGCACCTGTCACCAAGGCGGGCTGGCTCTTCAAACAGGCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp CTCTGGTGCCGCCGCATTCGGTCAATCTGCTCCTCCACGCTCATCTaGACCTTCCCCTCGCCAGGAAACACAGCACTCTTGGGGCGTTCC +
Preference number: 6 (lower is better)
Translates to: LWCRRIRSICSSTLI*TFPSPGNTALLGRS
Trigger: GGAACGCCCCAAGAGTGCTGTGTTTCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCGGCGGCACCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS TCA 72 bp GGCCCCCTTCTGCAGAGCGGGGCTCCGGATCTAATCTaGTCTAATCAGTCATCTCTCCGGCTGGCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GPLLQSGAPDLI*SNQSSLRLAGP
Trigger: GGGACCTGCCAGCCGGAGAGATGACTGATTAGATCAGATTAGATCCGGAGCCCCGCTCTGCAGAAGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS TCA 72 bp GGTGACAGGTGCATTGGGGTTCCGCTTCATGGAGTGTaGGCGCTTGCCAAAGGCGACGGCTTTGCGGGCTGT +
Preference number: 6 (lower is better)
Translates to: GDRCIGVPLHGV*ALAKGDGFAGC
Trigger: ACAGCCCGCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCAATGCACCTGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp GTGCATTGGGGTTCCGCTTCATGGAGTGTGAGCGCTTaGCAAAGGCGACGGCTTTGCGGGCTGTGCGAGTTG +
Preference number: 6 (lower is better)
Translates to: VHWGSASWSVSA*QRRRLCGLCEL
Trigger: CAACTCGCACAGCCCGCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCAATGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp TGGAGCTCTTGCGCTGGGCAATTTTGTCAGGGTTGGTaGGTGGTGGGAAACTCCGCCGGTGTCCCCCAGTCT +
Preference number: 6 (lower is better)
Translates to: WSSCAGQFCQGW*VVGNSAGVPQS
Trigger: AGACTGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp ATGGAGCCACTCTGGTGCCGCCGCATTCGGTCAATCTaGTCCTCCACGCTCATCTTGACCTTCCCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: MEPLWCRRIRSI*SSTLILTFPSP
Trigger: TGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCGGCGGCACCAGAGTGGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp ACGCAGAGTAGCTGGACGGGTGAAGGAGTCTGGGGCTaGATTCCCATCTGCACGGCTGAAACCCATGCCAGC +
Preference number: 6 (lower is better)
Translates to: TQSSWTGEGVWG*IPICTAETHAS
Trigger: GCTGGCATGGGTTTCAGCCGTGCAGATGGGAATGCAGCCCCAGACTCCTTCACCCGTCCAGCTACTCTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp CTTGCGCTGGGCAATTTTGTCAGGGTTGGTGCGTGGTaGGAAACTCCGCCGGTGTCCCCCAGTCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: LALGNFVRVGAW*ETPPVSPSLSI
Trigger: GATGGAGAGACTGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp TCATGGAGCTCTTGCGCTGGGCAATTTTGTCAGGGTTaGTGCGTGGTGGGAAACTCCGCCGGTGTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: SWSSCAGQFCQG*CVVGNSAGVPQ
Trigger: CTGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GGCCGGCATGGAACAGATGCTCTCCGGCCGCACTCCTaGCGGGTAGTACTGATAATCATCGGGGTACTGGGA +
Preference number: 6 (lower is better)
Translates to: GRHGTDALRPHS*RVVLIIIGVLG
Trigger: TCCCAGTACCCCGATGATTATCAGTACTACCCGCCAGGAGTGCGGCCGGAGAGCATCTGTTCCATGCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 72 bp CCCTTGGGCAAACCTGGGCAGGAGGTGTGTCCACTCTaGATGGGTGACTTTGTTCCAGGGTGCACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: PLGKPGQEVCPL*MGDFVPGCTQL
Trigger: CAGCTGGGTGCACCCTGGAACAAAGTCACCCATCCAGAGTGGACACACCTCCTGCCCAGGTTTGCCCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564627.2
CDS CAA 72 bp GGCCGCTCTGGAGGGACCTCGGACACCATGTTGTGGTaGGGTATGTCACTGTTGGTGGTAGCCGGGCGTTTC +
Preference number: 6 (lower is better)
Translates to: GRSGGTSDTMLW*GMSLLVVAGRF
Trigger: GAAACGCCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGAGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000564627.2
ENST00000637508.1
ENST00000672625.1
CDS CAA 72 bp GGTGCATTGGGGTTCCGCTTCATGGAGTGTGAGCGCTaGCCAAAGGCGACGGCTTTGCGGGCTGTGCGAGTT +
Preference number: 6 (lower is better)
Translates to: GALGFRFMECER*PKATALRAVRV
Trigger: AACTCGCACAGCCCGCAAAGCCGTCGCCTTTGGCAAGCGCTCACACTCCATGAAGCGGAACCCCAATGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp TCCACCCAGCACACAGTCACCTTAAACGTGTGTTTCCGGCTGATGTaGTCTGAGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: STQHTVTLNVCFRLM*SEGCTAATRKLRRG
Trigger: CCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGTGACTGTGTGCTGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS GCA 72 bp CAGCGATCCACCAGGACGAACCAGCGCTTGTTCCACTaGTTAACCCCGGAGCTGGCCTGTTTGAAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: QRSTRTNQRLFH*LTPELACLKSQ
Trigger: CTGGCTCTTCAAACAGGCCAGCTCCGGGGTTAAGCAGTGGAACAAGCGCTGGTTCGTCCTGGTGGATCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp CGTGGGGGATGGTGGGTAGTTGTAGGGGAACAGTCCTaGAGGGACTGGCCGCCTGTCTCCCAGGTAATCATA +
Preference number: 6 (lower is better)
Translates to: RGGWWVVVGEQS*RDWPPVSQVII
Trigger: TATGATTACCTGGGAGACAGGCGGCCAGTCCCTGCAGGACTGTTCCCCTACAACTACCCACCATCCCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS GCA 72 bp CCCATGCCAGCCCGACCTGTAGGGAGACAGTCCTCCTaGCTCCCCAATTCTCAACCCACAATACAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PMPARPVGRQSS*LPNSQPTIQAP
Trigger: AGGAGCCTGTATTGTGGGTTGAGAATTGGGGAGGCAGGAGGACTGTCTCCCTACAGGTCGGGCTGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp TCCGAGTCTGGCTTCTCATGGCTGTGCCGCACAGCTTaGGGCACTGACTTCTGGGCTGGAGGGATCTGTACT +
Preference number: 6 (lower is better)
Translates to: SESGFSWLCRTA*GTDFWAGGICT
Trigger: AGTACAGATCCCTCCAGCCCAGAAGTCAGTGCCCCAAGCTGTGCGGCACAGCCATGAGAAGCCAGACTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GTTCATAGTTTGCCTTGGGCTCGTTGGAGCCAGGCTTaGTGGGGGACCCCTGAGAGCCCGACACCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: VHSLPWARWSQA*WGTPESPTPVK
Trigger: TTTCACTGGTGTCGGGCTCTCAGGGGTCCCCCACCAAGCCTGGCTCCAACGAGCCCAAGGCAAACTATGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS CCA 72 bp TGGGCAAACCTGGGCAGGAGGTGTGTCCACTCTGGATaGGTGACTTTGTTCCAGGGTGCACCCAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: WANLGRRCVHSG*VTLFQGAPSWL
Trigger: CAACCAGCTGGGTGCACCCTGGAACAAAGTCACCCATCCAGAGTGGACACACCTCCTGCCCAGGTTTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564627.2
CDS CCA 72 bp GGGTCGCCTAGGTGCCCTAGTAGGCCTGTGGCTTCCTaGTATTCGGCCAGAATGCTACTGGTCAGAGGACTG +
Preference number: 6 (lower is better)
Translates to: GSPRCPSRPVAS*YSARMLLVRGL
Trigger: CAGTCCTCTGACCAGTAGCATTCTGGCCGAATACCAGGAAGCCACAGGCCTACTAGGGCACCTAGGCGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp GGTGGTAGGGGTCGCCTAGGTGCCCTAGTAGGCCTGTaGCTTCCTGGTATTCGGCCAGAATGCTACTGGTCA +
Preference number: 6 (lower is better)
Translates to: GGRGRLGALVGL*LPGIRPECYWS
Trigger: TGACCAGTAGCATTCTGGCCGAATACCAGGAAGCCACAGGCCTACTAGGGCACCTAGGCGACCCCTACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 72 bp TTCATGGAGCTCTTGCGCTGGGCAATTTTGTCAGGGTaGGTGCGTGGTGGGAAACTCCGCCGGTGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: FMELLRWAILSG*VRGGKLRRCPP
Trigger: TGGGGGACACCGGCGGAGTTTCCCACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp ATCAGCCCGAAACTTCAACATCTTTTTGGCAGCTCCGTCCCCAGTTaGGCAGCCTCAGAGGACCCGCCGGCCACCCTGATCCTACCATGC +
Preference number: 6 (lower is better)
Translates to: ISPKLQHLFGSSVPS*AASEDPPATLILPC
Trigger: GCATGGTAGGATCAGGGTGGCCGGCGGGTCCTCTGAGGCTGCCAAACTGGGGACGGAGCTGCCAAAAAGATGTTGAAGTTTCGGGCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 90 bp TCATTGTGGCTGACCCGTCGATCAGCCCGAAACTTCAACATCTTTTaGGCAGCTCCGTCCCCAGTTTGGCAGCCTCAGAGGACCCGCCGG +
Preference number: 6 (lower is better)
Translates to: SLWLTRRSARNFNIF*AAPSPVWQPQRTRR
Trigger: CCGGCGGGTCCTCTGAGGCTGCCAAACTGGGGACGGAGCTGCCAAAAAGATGTTGAAGTTTCGGGCTGATCGACGGGTCAGCCACAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS TCA 72 bp CTCAGCCTTAAACGTGTGTTTCCGGCTGATGTTGTCTaGGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: LSLKRVFPADVV*GLHCGYPEAQE
Trigger: CTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000637508.1
ENST00000672625.1
CDS TCA 72 bp GGGTTGCTTTCCCTCCCTGTGTGGCAGTCCTACCGATaGGAAGCAAGTCGACCAGATGGGCGTGGATGCTGT +
Preference number: 6 (lower is better)
Translates to: GLLSLPVWQSYR*EASRPDGRGCC
Trigger: ACAGCATCCACGCCCATCTGGTCGACTTGCTTCTCATCGGTAGGACTGCCACACAGGGAGGGAAAGCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 72 bp TTAAACGTGTGTTTCCGGCTGATGTTGTCTGAGGGCTaGACTGCGGCTACCCGGAAGCTCAGGAGGGGGATG +
Preference number: 6 (lower is better)
Translates to: LNVCFRLMLSEG*TAATRKLRRGM
Trigger: CATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp TTGTTGAGAGCTGCCTGCTTCTCTGCCTCTACCTCTTaGCTGGTGGGCACAAGGCTGATGTCTCTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: LLRAACFSASTS*LVGTRLMSLGV
Trigger: CACCCCCAGAGACATCAGCCTTGTGCCCACCAGGCAAGAGGTAGAGGCAGAGAAGCAGGCAGCTCTCAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp ATCCTTGGACTGCAAGGGCCTTCCGAAGGTCATCGCTaGCATCCCCCTGCTTCTAGGCAAGCCTGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: ILGLQGPSEGHR*HPPASRQACSP
Trigger: TGGAGAACAGGCTTGCCTAGAAGCAGGGGGATGGCAGCGATGACCTTCGGAAGGCCCTTGCAGTCCAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp CCCGGCGCAGATTCACCCACTGCTGAAGCTGGTTCATaGAGCTCTTGCGCTGGGCAATTTTGTCAGGGTTGG +
Preference number: 6 (lower is better)
Translates to: PGADSPTAEAGS*SSCAGQFCQGW
Trigger: CCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACCAGCTTCAGCAGTGGGTGAATCTGCGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CCA 72 bp GGGCAGAGACCTCAGACTCGAGGTGCTCATACTCTATaGTGCTGTTTGTCAGGGCCGTGGTCGCCTGAGACA +
Preference number: 6 (lower is better)
Translates to: GQRPQTRGAHTL*CCLSGPWSPET
Trigger: TGTCTCAGGCGACCACGGCCCTGACAAACAGCACCATAGAGTATGAGCACCTCGAGTCTGAGGTCTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 72 bp TGGTGGGTAGTTGTAGGGGAACAGTCCTGCAGGGACTaGCCGCCTGTCTCCCAGGTAATCATACTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: WWVVVGEQSCRD*PPVSQVIILGG
Trigger: TCCCCCAAGTATGATTACCTGGGAGACAGGCGGCCAGTCCCTGCAGGACTGTTCCCCTACAACTACCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS CCA 72 bp GTCCTACCGATGAGAAGCAAGTCGACCAGATGGGCGTaGATGCTGTGGAACCAGAGCTGGTGGCTAGGATGG +
Preference number: 6 (lower is better)
Translates to: VLPMRSKSTRWA*MLWNQSWWLGW
Trigger: CCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCATCTGGTCGACTTGCTTCTCATCGGTAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp GTGGCAGTCCTACCGATGAGAAGCAAGTCGACCAGATaGGCGTGGATGCTGTGGAACCAGAGCTGGTGGCTA +
Preference number: 6 (lower is better)
Translates to: VAVLPMRSKSTR*AWMLWNQSWWL
Trigger: TAGCCACCAGCTCTGGTTCCACAGCATCCACGCCCATCTGGTCGACTTGCTTCTCATCGGTAGGACTGCCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp CTAAGGACGCAGAGTAGCTGGACGGGTGAAGGAGTCTaGGGCTGCATTCCCATCTGCACGGCTGAAACCCAT +
Preference number: 6 (lower is better)
Translates to: LRTQSSWTGEGV*GCIPICTAETH
Trigger: ATGGGTTTCAGCCGTGCAGATGGGAATGCAGCCCCAGACTCCTTCACCCGTCCAGCTACTCTGCGTCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 72 bp TGTTTGAAGAGCCAGCCCGCCTTGGTGACAGGTGCATaGGGGTTCCGCTTCATGGAGTGTGAGCGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: CLKSQPALVTGA*GFRFMECERLP
Trigger: TGGCAAGCGCTCACACTCCATGAAGCGGAACCCCAATGCACCTGTCACCAAGGCGGGCTGGCTCTTCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CAA 72 bp GCATGCTCAGCCTTAAACGTGTGTTTCCGGCTGATGTaGTCTGAGGGCTGCACTGCGGCTACCCGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: ACSALNVCFRLM*SEGCTAATRKL
Trigger: GAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGCTGAGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000637508.1
ENST00000672625.1
CDS CAA 72 bp GCTGGGAGGCCATTGGCTTTCACCGGAGGCTCTTTCTaGACTTCTGGCCTCTCAGGCCTTCTCTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: AGRPLAFTGGSF*TSGLSGLLSAF
Trigger: GAAGGCAGAGAGAAGGCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGGTGAAAGCCAATGGCCTCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS CAA 72 bp CGCCGCATTCGGTCAATCTGCTCCTCCACGCTCATCTaGACCTTCCCCTCGCCAGGAAACACAGCACTCTTG +
Preference number: 6 (lower is better)
Translates to: RRIRSICSSTLI*TFPSPGNTALL
Trigger: CAAGAGTGCTGTGTTTCCTGGCGAGGGGAAGGTCAAGATGAGCGTGGAGGAGCAGATTGACCGAATGCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CAA 72 bp AAACTTCAACATCTTTTTGGCAGCTCCGTCCCCAGTTaGGCAGCCTCAGAGGACCCGCCGGCCACCCTGATC +
Preference number: 6 (lower is better)
Translates to: KLQHLFGSSVPS*AASEDPPATLI
Trigger: GATCAGGGTGGCCGGCGGGTCCTCTGAGGCTGCCAAACTGGGGACGGAGCTGCCAAAAAGATGTTGAAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 90 bp TCAGCTCGGAGCTGCTGCACCAGCCGGTCCTGCTCCCTCACCACCTaGTTCTGCTCACACAATTTTCCCAGCAGCTTATCTGTGTCTTGC +
Preference number: 6 (lower is better)
Translates to: SARSCCTSRSCSLTT*FCSHNFPSSLSVSC
Trigger: GCAAGACACAGATAAGCTGCTGGGAAAATTGTGTGAGCAGAACAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCAGCAGCTCCGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS TCA 72 bp TGTGTTCCGTCTTTCATTGTGGCGGCTTCTGAGGTGTaGTCCCCGCGCTGGAAAGCTCTAACTCTGCGAGCC +
Preference number: 6 (lower is better)
Translates to: CVPSFIVAASEV*SPRWKALTLRA
Trigger: GGCTCGCAGAGTTAGAGCTTTCCAGCGCGGGGATCACACCTCAGAAGCCGCCACAATGAAAGACGGAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS TCA 72 bp CTGGGAGGCCATTGGCTTTCACCGGAGGCTCTTTCTTaGCTTCTGGCCTCTCAGGCCTTCTCTCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LGGHWLSPEALS*LLASQAFSLPS
Trigger: AGAAGGCAGAGAGAAGGCCTGAGAGGCCAGAAGTCAAGAAAGAGCCTCCGGTGAAAGCCAATGGCCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS TCA 72 bp AGTCACCTTAAACGTGTGTTTCCGGCTGATGTTGTCTaGGGGCTGCACTGCGGCTACCCGGAAGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: SHLKRVFPADVV*GLHCGYPEAQE
Trigger: CTCCTGAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS GCA 72 bp GCTGCACTGCGGCTACCCGGAAGCTCAGGAGGGGGATaGTGCCCAGGATACTCTCTTCCTTCTCATCTTTAT +
Preference number: 6 (lower is better)
Translates to: AALRLPGSSGGG*CPGYSLPSHLY
Trigger: ATAAAGATGAGAAGGAAGAGAGTATCCTGGGCAGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp CAGAGACCTCAGACTCGAGGTGCTCATACTCTATGGTaGTGTTTGTCAGGGCCGTGGTCGCCTGAGACAGCT +
Preference number: 6 (lower is better)
Translates to: QRPQTRGAHTLW*CLSGPWSPETA
Trigger: AGCTGTCTCAGGCGACCACGGCCCTGACAAACAGCACCATAGAGTATGAGCACCTCGAGTCTGAGGTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp AGGTCATCGTGCAGGGCAGAGACCTCAGACTCGAGGTaGTCATACTCTATGGTGCTGTTTGTCAGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: RSSCRAETSDSR*SYSMVLFVRAV
Trigger: CACGGCCCTGACAAACAGCACCATAGAGTATGAGCACCTCGAGTCTGAGGTCTCTGCCCTGCACGATGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp TGGGTGTCCAAATTGAGCTGCTCCCAGAGGTCATCGTaGAGGGCAGAGACCTCAGACTCGAGGTGCTCATAC +
Preference number: 6 (lower is better)
Translates to: WVSKLSCSQRSS*RAETSDSRCSY
Trigger: GTATGAGCACCTCGAGTCTGAGGTCTCTGCCCTGCACGATGACCTCTGGGAGCAGCTCAATTTGGACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp CGGTTCAGCACCTCATTCTGGGTGTCCAAATTGAGCTaGTCCCAGAGGTCATCGTGCAGGGCAGAGACCTCA +
Preference number: 6 (lower is better)
Translates to: RFSTSFWVSKLS*SQRSSCRAETS
Trigger: TGAGGTCTCTGCCCTGCACGATGACCTCTGGGAGCAGCTCAATTTGGACACCCAGAATGAGGTGCTGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CAA 72 bp CACACAGTCACCTTAAACGTGTGTTTCCGGCTGATGTaGTCTGAGGGCTGCACTGCGGCTACCCGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: HTVTLNVCFRLM*SEGCTAATRKL
Trigger: GAGCTTCCGGGTAGCCGCAGTGCAGCCCTCAGACAACATCAGCCGGAAACACACGTTTAAGGTGACTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414478.1
CDS CAA 72 bp CTGACCCGTCGATCAGCCCGAAACTTCAACATCTTTTaGGCAGCTCCGTCCCCAGTTTGGCAGCCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: LTRRSARNFNIF*AAPSPVWQPQR
Trigger: CCTCTGAGGCTGCCAAACTGGGGACGGAGCTGCCAAAAAGATGTTGAAGTTTCGGGCTGATCGACGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 72 bp GCACTGCGGCTACCCGGAAGCTCAGGAGGGGGATGCTaGCCAGGATACTCTCTTCCTTCTCATCTTTATAGT +
Preference number: 6 (lower is better)
Translates to: ALRLPGSSGGGC*PGYSLPSHLYS
Trigger: ACTATAAAGATGAGAAGGAAGAGAGTATCCTGGGCAGCATCCCCCTCCTGAGCTTCCGGGTAGCCGCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp GATTCACCCACTGCTGAAGCTGGTTCATGGAGCTCTTaGGCTGGGCAATTTTGTCAGGGTTGGTGCGTGGTG +
Preference number: 6 (lower is better)
Translates to: DSPTAEAGSWSS*AGQFCQGWCVV
Trigger: CACCACGCACCAACCCTGACAAAATTGCCCAGCGCAAGAGCTCCATGAACCAGCTTCAGCAGTGGGTGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
ENST00000672625.1
CDS GCA 72 bp GGGTGTCCAGGGGCAATGTCTGGTGGGGGTCTTTCTTaGTTTGTTCATAGTTTGCCTTGGGCTCGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: GCPGAMSGGGLS*FVHSLPWARWS
Trigger: GCTCCAACGAGCCCAAGGCAAACTATGAACAAAGCAAGAAAGACCCCCACCAGACATTGCCCCTGGACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000272203.8
ENST00000414478.1
CDS CCA 72 bp AAGTTCATCCATCTTATCGTGGACCGTGGGGGATGGTaGGTAGTTGTAGGGGAACAGTCCTGCAGGGACTGG +
Preference number: 6 (lower is better)
Translates to: KFIHLIVDRGGW*VVVGEQSCRDW
Trigger: CCAGTCCCTGCAGGACTGTTCCCCTACAACTACCCACCATCCCCCACGGTCCACGATAAGATGGATGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637508.1
CDS CCA 72 bp GCGTGGATGCTGTGGAACCAGAGCTGGTGGCTAGGATaGGGCTGCTCAGGCAATATTAAAGGAGAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: AWMLWNQSWWLG*GCSGNIKGELP
Trigger: AGGAAGCTCTCCTTTAATATTGCCTGAGCAGCCCCATCCTAGCCACCAGCTCTGGTTCCACAGCATCCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 72 bp AGCTGCTGCACCAGCCGGTCCTGCTCCCTCACCACCTaGTTCTGCTCACACAATTTTCCCAGCAGCTTATCT +
Preference number: 6 (lower is better)
Translates to: SCCTSRSCSLTT*FCSHNFPSSLS
Trigger: AGATAAGCTGCTGGGAAAATTGTGTGAGCAGAACAAGGTGGTGAGGGAGCAGGACCGGCTGGTGCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CAA 72 bp CCCCTCCATCACGTCCTGGATCCTCCAGATCTCCTTTaGGATTTGCCGGTTCAGCACCTCATTCTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: PLHHVLDPPDLL*DLPVQHLILGV
Trigger: GACACCCAGAATGAGGTGCTGAACCGGCAAATCCAAAAGGAGATCTGGAGGATCCAGGACGTGATGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CAA 90 bp TCTGGAGGGACCTCGGACACCATGTTGTGGTTGGGTATGTCACTGTaGGTGGTAGCCGGGCGTTTCCCACCTGTTTTATTGGACATGTCC +
Preference number: 6 (lower is better)
Translates to: SGGTSDTMLWLGMSL*VVAGRFPPVLLDMS
Trigger: GGACATGTCCAATAAAACAGGTGGGAAACGCCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGTCCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000564627.2
ENST00000637508.1
ENST00000672625.1
CDS CAA 90 bp CCCGATTCATCTGCTGTTATTGCTGCCGCTGCTGAGAAGCTGAGATaGATTGAGCAGTTCTCCCTTCTCTTCGGTCAGCCTGCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: PDSSAVIAAAAEKLR*IEQFSLLFGQPAQP
Trigger: AGGCTGGGCAGGCTGACCGAAGAGAAGGGAGAACTGCTCAATCAATCTCAGCTTCTCAGCAGCGGCAGCAATAACAGCAGATGAATCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 72 bp TTTCCTAATGTCCTTCATGTCTTAGGATCCTTGGACTaGAAGGGCCTTCCGAAGGTCATCGCTGCCATCCCC +
Preference number: 6 (lower is better)
Translates to: FPNVLHVLGSLD*KGLPKVIAAIP
Trigger: GGGGATGGCAGCGATGACCTTCGGAAGGCCCTTGCAGTCCAAGGATCCTAAGACATGAAGGACATTAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS GCA 72 bp AGTCCTCTGGTCCAACTCGTAAGGCTGTGGCAGAGATaGAGAGTGATTGGTGGCAGAGTCTCTAGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: SPLVQLVRLWQR*RVIGGRVSSSS
Trigger: AGAACTGCTAGAGACTCTGCCACCAATCACTCTGCATCTCTGCCACAGCCTTACGAGTTGGACCAGAGGACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 72 bp ACCTCGGACACCATGTTGTGGTTGGGTATGTCACTGTaGGTGGTAGCCGGGCGTTTCCCACCTGTTTTATTG +
Preference number: 6 (lower is better)
Translates to: TSDTMLWLGMSL*VVAGRFPPVLL
Trigger: CAATAAAACAGGTGGGAAACGCCCGGCTACCACCAACAGTGACATACCCAACCACAACATGGTGTCCGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000564627.2
ENST00000637508.1
ENST00000672625.1
CDS CAA 72 bp GGCTCCAGGTCAATGTACCGTTCAGGGATGAGGACTTaGTCTGGAGTGGAGAGCTCCTTATTGATGTCCACG +
Preference number: 6 (lower is better)
Translates to: GSRSMYRSGMRT*SGVESSLLMST
Trigger: CGTGGACATCAATAAGGAGCTCTCCACTCCAGACAAAGTCCTCATCCCTGAACGGTACATTGACCTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS GCA 72 bp CTAGTAGGCCTGTGGCTTCCTGGTATTCGGCCAGAATaGTACTGGTCAGAGGACTGGAGGCAGAATAAACAA +
Preference number: 6 (lower is better)
Translates to: LVGLWLPGIRPE*YWSEDWRQNKQ
Trigger: TTGTTTATTCTGCCTCCAGTCCTCTGACCAGTAGCATTCTGGCCGAATACCAGGAAGCCACAGGCCTACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp CCTGGTATTCGGCCAGAATGCTACTGGTCAGAGGACTaGAGGCAGAATAAACAAGGAGGGGATGATATCCTC +
Preference number: 6 (lower is better)
Translates to: PGIRPECYWSED*RQNKQGGDDIL
Trigger: GAGGATATCATCCCCTCCTTGTTTATTCTGCCTCCAGTCCTCTGACCAGTAGCATTCTGGCCGAATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 72 bp TCTGCTGTTATTGCTGCCGCTGCTGAGAAGCTGAGATaGATTGAGCAGTTCTCCCTTCTCTTCGGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: SAVIAAAAEKLR*IEQFSLLFGQP
Trigger: AGGCTGACCGAAGAGAAGGGAGAACTGCTCAATCAATCTCAGCTTCTCAGCAGCGGCAGCAATAACAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS TCA 72 bp CTGCCTCCCCAATTCTCAACCCACAATACAGGCTCCTaGGCTGAAAATCAACTTGCTTCTCAGAGATCCTTC +
Preference number: 6 (lower is better)
Translates to: LPPQFSTHNTGS*AENQLASQRSF
Trigger: GAAGGATCTCTGAGAAGCAAGTTGATTTTCAGCTCAGGAGCCTGTATTGTGGGTTGAGAATTGGGGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CCA 72 bp CAGGTCAATGTACCGTTCAGGGATGAGGACTTTGTCTaGAGTGGAGAGCTCCTTATTGATGTCCACGTCATA +
Preference number: 6 (lower is better)
Translates to: QVNVPFRDEDFV*SGELLIDVHVI
Trigger: TATGACGTGGACATCAATAAGGAGCTCTCCACTCCAGACAAAGTCCTCATCCCTGAACGGTACATTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000637508.1
CDS CCA 72 bp GAAAATCTTCCCAGACACGAGATGATACATTCCAGCTaGGGACTGTCAGATCTGCTCAGAAGCAAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: ENLPRHEMIHSS*GLSDLLRSKEV
Trigger: AACCTCCTTGCTTCTGAGCAGATCTGACAGTCCCCAGCTGGAATGTATCATCTCGTGTCTGGGAAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS TCA 72 bp GTGTGTTTATGGCTGAAAATCTTCCCAGACACGAGATaGTACATTCCAGCTGGGGACTGTCAGATCTGCTCA +
Preference number: 6 (lower is better)
Translates to: VCLWLKIFPDTR*YIPAGDCQICS
Trigger: TGAGCAGATCTGACAGTCCCCAGCTGGAATGTATCATCTCGTGTCTGGGAAGATTTTCAGCCATAAACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672625.1
CDS CAA 72 bp CTGTTGGTGGTAGCCGGGCGTTTCCCACCTGTTTTATaGGACATGTCCAAGGTCGATATTTTCAAGTCAAAT +
Preference number: 6 (lower is better)
Translates to: LLVVAGRFPPVL*DMSKVDIFKSN
Trigger: ATTTGACTTGAAAATATCGACCTTGGACATGTCCAATAAAACAGGTGGGAAACGCCCGGCTACCACCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272203.8
ENST00000414478.1
ENST00000564627.2
ENST00000637508.1
ENST00000672625.1
CDS TCA 72 bp ACCCACTGCTATCTTATCCTGCCAAGATGTTCTTTTTaGTATCACGTTTCAGTTCCTCTGGCTTTCTATATT +
Preference number: 6 (lower is better)
Translates to: THCYLILPRCSF*YHVSVPLAFYI
Trigger: AATATAGAAAGCCAGAGGAACTGAAACGTGATATCAAAAAGAACATCTTGGCAGGATAAGATAGCAGTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672625.1