RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000052126

Ensembl transcript IDs: ENST00000299275.10, ENST00000424268.5, ENST00000429027.7, ENST00000510738.2, ENST00000534979.1, ENST00000535357.5, ENST00000536974.5, ENST00000537027.1, ENST00000538034.5, ENST00000538068.1, ENST00000538305.5, ENST00000538677.1, ENST00000538714.5, ENST00000538972.1, ENST00000539256.5, ENST00000540972.5

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATAATGGACTTTGGAGACTCAGAAGGGAGAGGGTGGAAGGTCGGTaGAGGATTGGGTACAACATACACTACTCGGGTAATGGGTGCACT +
Preference number: 1 (lower is better)
Translates to: YNGLWRLRRERVEGR*RIGYNIHYSGNGCT
Trigger: AGTGCACCCATTACCCGAGTAGTGTATGTTGTACCCAATCCTTCACCGACCTTCCACCCTCTCCCTTCTGAGTCTCCAAAGTCCATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR CCA 90 bp CTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGTaGTATAATGGACTTTGGAGACTCAGAAGGGAGAGGGTGGAAGGT +
Preference number: 1 (lower is better)
Translates to: LISWSYTMGMQRHTV*YNGLWRLRRERVEG
Trigger: ACCTTCCACCCTCTCCCTTCTGAGTCTCCAAAGTCCATTATACCACACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR CCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATaGAACCAACCTAAGAGTCCACCAACCAAGGAGTGGATAAAGAAA +
Preference number: 1 (lower is better)
Translates to: CTCMFIAAQFATPRV*NQPKSPPTKEWIKK
Trigger: TTTCTTTATCCACTCCTTGGTTGGTGGACTCTTAGGTTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR CCA 90 bp ACTCCAAGGGTATGGAACCAACCTAAGAGTCCACCAACCAAGGAGTaGATAAAGAAAATGTGGTTTATATACACCATGGAATACTACTCA +
Preference number: 1 (lower is better)
Translates to: TPRVWNQPKSPPTKE*IKKMWFIYTMEYYS
Trigger: TGAGTAGTATTCCATGGTGTATATAAACCACATTTTCTTTATCCACTCCTTGGTTGGTGGACTCTTAGGTTGGTTCCATACCCTTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR TCA 90 bp TCTACTAGGAATGAGGAAAAGAGGAGTGAGACAAGCATTCTGAGGTaGGTAATCAAAGATTTGGAACATTTGTTATGGAGAATAGGAAAG +
Preference number: 1 (lower is better)
Translates to: STRNEEKRSETSILR*VIKDLEHLLWRIGK
Trigger: CTTTCCTATTCTCCATAACAAATGTTCCAAATCTTTGATTACTCACCTCAGAATGCTTGTCTCACTCCTCTTTTCCTCATTCCTAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR-3UTR CCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGAAGAATGGCCATAATTaGCCGGGTGCAGTGGGTCAC +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWKNGHN*PGAVGH
Trigger: GTGACCCACTGCACCCGGCCAATTATGGCCATTCTT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGAGTGGGAGGGTAGCTTaGATTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWSGRVA*IQEFET
Trigger: GGTCTCAAACTCCTGAATTCAAGCTACCCTCCCACT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGGAAGGTACACAACAATaGGATGCCTCCTTATTCCTG +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWEGTQQ*DASLFL
Trigger: CAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTC...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGAGGCTTAAACACAAGTaGCAAAGGCAGAACACAGGT +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWRLKHK*QRQNTG
Trigger: ACCTGTGTTCTGCCTTTGTCACTTGTGTTTAAGCCT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTGCACAGATACCAACTaGCAAAAACAGAAGCCTCTT +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWCTDTN*QKQKPL
Trigger: AAGAGGCTTCTGTTTTTGTCAGTTGGTATCTGTGCA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTATAGCAGCACAATTTaGAACTCCAAGGGTATGGAA +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWYSSTI*NSKGME
Trigger: TTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGCTACGGAAAACAGTGTaGAGATTCCTTAAAGAACTA +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWLRKTV*RFLKEL
Trigger: TAGTTCTTTAAGGAATCTCCACACTGTTTTCCGTAG...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGACACTTTTACACTGCTaGTGGGAATGTAAACTAGTA +
Preference number: 2 (lower is better)
Translates to: WEIEAGRALELRSLRPAWTLLHC*WECKLV
Trigger: TACTAGTTTACATTCCCACCAGCAGTGTAAAAGTGT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATTGGCCGGGTGCAGTaGGTCACGCCAGCACTTTGG +
Preference number: 2 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAIGRVQ*VTPALW
Trigger: CCAAAGTGCTGGCGTGACCCACTGCACCCGGCCAAT...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGAGGTGGGCGGATCATaGGGTCAAGAGATCGAGACC +
Preference number: 2 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAEVGGS*GQEIET
Trigger: GGTCTCGATCTCTTGACCTCATGATCCGCCCACCTC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCTTGAGCTCAGGAGCTTaGGATCAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: LKRRYTTMRCLLIPARMALSSGA*DQPGQH
Trigger: ATGTTGCCCAGGCTGATCTCAAGCTCCTGAGCTCAA...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTGCACTCCAGCCTGCTaGCAGAGCGAGACTCCATCT +
Preference number: 2 (lower is better)
Translates to: RRYTTMRCLLIPARMAIICTPAC*QSETPS
Trigger: AGATGGAGTCTCGCTCTGTCAGCAGGCTGGAGTGCA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTAGGAGGAGGTTGCAGTaGGCCAAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIRRRLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGCAACCTCCTCCT...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTGGCAGGAGAATCACTTaGACCCTGGAGGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIGRRIT*TLEEEV
Trigger: AACCTCCTCCTCCAGGGTTCAAGTGATTCTCCTGCC...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR GCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCCGAGTGTGGTGGCGTaGACTTGTGATCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: TKTNNPIKKWANDANRHFPSVVA*TCDPSY
Trigger: GTAGCTGGGATCACAAGTGCACGCCACCACACTCGG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR GCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCCTGGAGGAGGAGGTTaGAGTGAGCCAAGATCACGC +
Preference number: 2 (lower is better)
Translates to: TKTNNPIKKWANDANRHFPGGGG*SEPRSR
Trigger: GCGTGATCTTGGCTCACTGCAACCTCCTCCTCCAGG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATTCAGAAGGGAGAGGGTaGAAGGTCGGTGAAGGATTG +
Preference number: 2 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNSEGRG*KVGEGL
Trigger: CAATCCTTCACCGACCTTCCACCCTCTCCCTTCTGA...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGGGCTGCAGTGAGCTGTaGTTATGCCACTACACTCCA +
Preference number: 2 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVGCSEL*LCHYTP
Trigger: TGGAGTGTAGTGGCATAATCACAGCTCACTGCAGCC...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR GCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGCTACACTATGGGTATaGAAAGGCATACAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAATLWV*KGIQCG
Trigger: ACCACACTGTATGCCTTTGCATACCCATAGTGTAGC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTCAGTGGCTCATGCAGTaGGAGGGTAGCTTGAATTCA +
Preference number: 2 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIQWLMQ*EGSLNS
Trigger: TGAATTCAAGCTACCCTCCCACTGCATGAGCCACTG...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGTTGGAGCTACACTATaGGTATGCAAAGGCATACAG +
Preference number: 2 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAVGATL*VCKGIQ
Trigger: CTGTATGCCTTTGCATACCCATAGTGTAGCTCCAAC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCCTTCAGTGAGCCATTaGGCCATGATCTTGCACCAC +
Preference number: 2 (lower is better)
Translates to: TKTNNPIKKWANDANRHFPSVSH*AMILHH
Trigger: GTGGTGCAAGATCATGGCTCAATGGCTCACTGAAGG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTTGAATTCAGGAGTTTaGGACCAGCGTGGACAACTT +
Preference number: 2 (lower is better)
Translates to: RRYTTMRCLLIPARMAIILNSGV*DQRGQL
Trigger: AAGTTGTCCACGCTGGTCTCAAACTCCTGAATTCAA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCATTAGCCTGGCATGGTaGCATACACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: TKTNNPIKKWANDANRHFISLAW*HTPVVP
Trigger: TGGGACTACAGGTGTATGCCACCATGCCAGGCTAAT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCCAAAGGCATACAGTGTaGTATAATGGACTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAQRHTV*YNGLWR
Trigger: TCTCCAAAGTCCATTATACCACACTGTATGCCTTTG...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR GCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATATGCCTCCTTATTCCTaGAAGAATGGCCATAATTGG +
Preference number: 2 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNMPPYS*KNGHNW
Trigger: CCAATTATGGCCATTCTTGCAGGAATAAGGAGGCAT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR GCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCAAAGATACATGCACATaGATGTTTATAGCAGCACAA +
Preference number: 2 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAKDTCT*MFIAAQ
Trigger: TTGTGCTGCTATAAACATGCATGTGCATGTATCTTT...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATTTGGTATGGATGTGGTaGGAAGAAAACACTTTTACA +
Preference number: 2 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNLVWMW*EENTFT
Trigger: TGTAAAAGTGTTTTCTTCTCACCACATCCATACCAA...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATAAAAACAACAGATGTTaGTATGGATGTGGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNKNNRC*YGCGEK
Trigger: CTTCTCACCACATCCATACCAACATCTGTTGTTTTT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR CAA 90 bp GAAAGCTACTGGATAACGAAGACAATCAGTTTAGAATATGCTGTTTaGTCAACTAGTATTAGTCACCAAGAAGTGAAGCTAGTCATAGGC +
Preference number: 2 (lower is better)
Translates to: ESYWITKTISLEYAV*STSISHQEVKLVIG
Trigger: GCCTATGACTAGCTTCACTTCTTGGTGACTAATACTAGTTGACAAAACAGCATATTCTAAACTGATTGTCTTCGTTATCCAGTAGCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATCTTCTTACACTGCTaGAGGTCCATGTCTTTAGCT +
Preference number: 2 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKIFLHC*RSMSLA
Trigger: AGCTAAAGACATGGACCTTCAGCAGTGTAAGAAGAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
3UTR-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCAGAAGTGATAAAATaGTGCTCTGTGACCAAAAGC +
Preference number: 2 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPEVIK*CSVTKS
Trigger: GCTTTTGGTCACAGAGCATCATTTTATCACTTCTGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
3UTR-3UTR TCA 90 bp TGCAGTGTAATTCACATTTCATTAAACCCACCTATGGTTAAGTGTACAGTTCAGTTCTTCTCCAAGGTATaGTCTACTAGGAATGAGGAA +
Preference number: 2 (lower is better)
Translates to: CSVIHISLNPPMVKCTVQFFSKV*STRNEE
Trigger: TTCCTCATTCCTAGTAGATCATACCTTGGAGAAGAA...CTGAACTGTACACTTAACCATAGGTGGGTTTAATGAAATGTGAATTACACTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCCACCAACCAAGGAGTaGATAAAGAAAATGTGGTTT +
Preference number: 2 (lower is better)
Translates to: TKTNNPIKKWANDANRHFPPTKE*IKKMWF
Trigger: AAACCACATTTTCTTTATCCACTCCTTGGTTGGTGG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CCA 90 bp CATTTGTTATGGAGAATAGGAAAGCTACTGGATAACGAAGACAATCAGTTTAGACCTGCATACAGATACTaGAACTTCCATTACATCTTC +
Preference number: 2 (lower is better)
Translates to: HLLWRIGKLLDNEDNQFRPAYRY*NFHYIF
Trigger: GAAGATGTAATGGAAGTTCCAGTATCTGTATGCAGG...TCTAAACTGATTGTCTTCGTTATCCAGTAGCTTTCCTATTCTCCATAACAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR CAA 90 bp TTTGACAAATATGTGATTTGCCTGTACTTTCTCCCAGTCTGTGACTaGTCTTTTCATTCTCTTCAGTATCCTACACAGATAAAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: FDKYVICLYFLPVCD*SFHSLQYPTQIKQN
Trigger: ATTTTGCTTTATCTGTGTAGGATACTGAAGAGAATGAAAAGACAAGTCACAGACTGGGAGAAAGTACAGGCAAATCACATATTTGTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR-3UTR CAA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGCTTGAATTCAGGAGTTaGAGACCAGCGTGGACAACT +
Preference number: 3 (lower is better)
Translates to: WEIEAGRALELRSLRPAWLEFRS*RPAWTT
Trigger: AGTTGTCCACGCTGGTCTCAAACTCCTGAATTCAAG...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR TCA 72 bp CTTTGGAGACTCAGAAGGGAGAGGGTGGAAGGTCGGTaGAGGATTGGGTACAACATACACTACTCGGGTAAT +
Preference number: 3 (lower is better)
Translates to: LWRLRRERVEGR*RIGYNIHYSGN
Trigger: ATTACCCGAGTAGTGTATGTTGTACCCAATCCTTCACCGACCTTCCACCCTCTCCCTTCTGAGTCTCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR TCA 72 bp CTCATGCAGTGGGAGGGTAGCTTGAATTCAGGAGTTTaGGACCAGCGTGGACAACTTAGTAAGACTGTCTCT +
Preference number: 3 (lower is better)
Translates to: LMQWEGSLNSGV*DQRGQLSKTVS
Trigger: AGAGACAGTCTTACTAAGTTGTCCACGCTGGTCTCAAACTCCTGAATTCAAGCTACCCTCCCACTGCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CAA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTCTTGAGCTCAGGAGCTaGAGATCAGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: RRYTTMRCLLIPARMAIILELRS*RSAWAT
Trigger: TGTTGCCCAGGCTGATCTCAAGCTCCTGAGCTCAAG...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR CCA 72 bp ATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATaGAACCAACCTAAGAGTCCACCAACCAAGGAGTGG +
Preference number: 3 (lower is better)
Translates to: MFIAAQFATPRV*NQPKSPPTKEW
Trigger: CCACTCCTTGGTTGGTGGACTCTTAGGTTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCAGGCAGGAGAATCACTaGAACCCTGGAGGAGGAGGT +
Preference number: 3 (lower is better)
Translates to: TKTNNPIKKWANDANRHFRQENH*NPGGGG
Trigger: ACCTCCTCCTCCAGGGTTCAAGTGATTCTCCTGCCT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR-3UTR CAA 90 bp TCTGTGTCTGGCTCTTTTAGGCAGCATCAAGGTTTTAAAGTTCAGTCATCGTATCTCCCAGTCTGTGACTaGTCTTTTCATTCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: SVSGSFRQHQGFKVQSSYLPVCD*SFHSLQ
Trigger: CTGAAGAGAATGAAAAGACAAGTCACAGACTGGGAG...ATACGATGACTGAACTTTAAAACCTTGATGCTGCCTAAAAGAGCCAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR CCA 72 bp AGAAGTGAAGCTAGTCATAGGCCTGCATACAGATACTaGAACTTCCATTACATCTTCTATTCCCAGGAAGAA +
Preference number: 3 (lower is better)
Translates to: RSEASHRPAYRY*NFHYIFYSQEE
Trigger: TTCTTCCTGGGAATAGAAGATGTAATGGAAGTTCCAGTATCTGTATGCAGGCCTATGACTAGCTTCACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR-3UTR CAA 90 bp TGTAGTCTGTGTCTGGCTCTTTTAGGCAGCATCAAGGTTTTAAAGTTCAGTCATATTCCTTCCTTGGTTTaGGAAAGCAGAAATAGCAAG +
Preference number: 3 (lower is better)
Translates to: CSLCLALLGSIKVLKFSHIPSLV*ESRNSK
Trigger: CTTGCTATTTCTGCTTTCCAAAACCAAGGAAGGAAT...ATGACTGAACTTTAAAACCTTGATGCTGCCTAAAAGAGCCAGACACAGACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR-3UTR CAA 90 bp TGTGTGCACACGTTTTCATTCTTAACATACTTACGTAGTAAAATTGCTTGGTCACCCCCAGTGAATTCCTaGGGTACCTCTGTCAAAATT +
Preference number: 3 (lower is better)
Translates to: CVHTFSFLTYLRSKIAWSPPVNS*GTSVKI
Trigger: AATTTTGACAGAGGTACCCAAGGAATTCACTGGGGG...TGACCAAGCAATTTTACTACGTAAGTATGTTAAGAATGAAAACGTGTGCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR GCA 72 bp TACCTTCATCTTGTGACAGACAATATAGACTTATCTTaGTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGG +
Preference number: 3 (lower is better)
Translates to: YLHLVTDNIDLS*SSVLRIAGTVG
Trigger: CCCAACTGTACCAGCAATTCTTAAGACAGAAGAGCAAGATAAGTCTATATTGTCTGTCACAAGATGAAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538677.1
3UTR-3UTR CAA 90 bp TGCAGTGTAATTCACATTTCATTAAACCCACCTATGGTTAAGTGTACAGTTCAGGTCAAAATTCCTTCCTaGGTTTTGGAAAGCAGAAAT +
Preference number: 3 (lower is better)
Translates to: CSVIHISLNPPMVKCTVQVKIPS*VLESRN
Trigger: ATTTCTGCTTTCCAAAACCAAGGAAGGAATTTTGAC...CTGAACTGTACACTTAACCATAGGTGGGTTTAATGAAATGTGAATTACACTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
3UTR TCA 72 bp TCATTAAACCCACCTATGGTTAAGTGTACAGTTCAGTaGCTTTTAGTGAATTTACAGAGTTGTGCAACTATT +
Preference number: 3 (lower is better)
Translates to: SLNPPMVKCTVQ*LLVNLQSCATI
Trigger: AATAGTTGCACAACTCTGTAAATTCACTAAAAGTCACTGAACTGTACACTTAACCATAGGTGGGTTTAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTTGCCCAGGCTGGAGTaGAATGGCACGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWLPRLE*NGTTSA
Trigger: AGCCGAGGTCGTGCCATTGCACTCCAGCCTGGGCAA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGCCGAGTGTGGTGGCGTaGACTTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWPSVVA*TCDPSY
Trigger: GTAGCTGGGATCACAAGTGCACGCCACCACACTCGG...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGACGACCTCGGCTCACTaGAACCACTGCCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWTTSAH*NHCLWV
Trigger: AACCCAGAGGCAGTGGTTGCAGTGAGCCGAGGTCGT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGAATGTGATCCTTCTGTaGGCTGCGGCTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWNVILL*AAAEWM
Trigger: CATCCACTCAGCCGCAGCTCACAGAAGGATCACATT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGGATGGGCCCTGTGTCTaGGGTCTATTGTCACATCTC +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWDGPCV*GLLSHL
Trigger: GAGATGTGACAATAGACCGCAGACACAGGGCCCATC...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGGTGATGGTTGTCCTGTaGCTGGATGTTTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWVMVVL*LDVCRS
Trigger: TGACCTGCAAACATCCAGTCACAGGACAACCATCAC...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGCACTGTCTGAATGGCTaGTGGGTTATCTGCATGCAT +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWHCLNG*WVICMH
Trigger: ATGCATGCAGATAACCCAGCAGCCATTCAGACAGTG...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCCTCGGCCGCCCCTGGTaGTCCCGTAAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMALGRPW*SRKSRT
Trigger: GGTCCTGGACTTACGGGATCACCAGGGGCGGCCGAG...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCCACCGCCTCGCCGGTaGCGGGGTGCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVPPPRR*RGAARW
Trigger: CCACCTGGCTGCACCCCGTCACCGGCGAGGCGGTGG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTCCTCTCTGAATTGGTaGAGACACTTCCGATCTGTA +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWSSLNW*RHFRSV
Trigger: TACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTTTCAGGCCTTGTCTTaGTGTTTCTTGGGAGTGTTC +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWFQALS*CFLGVF
Trigger: GAACACTCCCAAGAAACAGCAAGACAAGGCCTGAAA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGCTTTGTAAGGGTGACTaGTCTGAAGCACCGATAACA +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWLCKGD*SEAPIT
Trigger: TGTTATCGGTGCTTCAGACCAGTCACCCTTACAAAG...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp TGTAGTCTGTGTCTGGCTCTTTTAGGCAGCATCAAGGTTTTAAAGTTCAGTCATATCCGCCGCCATGTCTaGTCCCTAGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSLCLALLGSIKVLKFSHIRRHV*SLAAAA
Trigger: GGCGGCGGCGGCTAGGGATCAGACATGGCGGCGGAT...ATGACTGAACTTTAAAACCTTGATGCTGCCTAAAAGAGCCAGACACAGACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGATGCCTCCTTATTCCTaGAAGAATGGCCATAATTGG +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWMPPYS*KNGHNW
Trigger: CCAATTATGGCCATTCTTGCAGGAATAAGGAGGCAT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTTTCTATCTCTTGGCTaGCTGATAGCAAAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWFLSLG*LIAKLA
Trigger: AGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGTCACGCCAGCACTTTaGGAGGCCGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAVTPAL*EAEVGG
Trigger: TCCGCCCACCTCGGCCTCCCAAAGTGCTGGCGTGAC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCACCGCCTCGCCGGTaGCGGGGTGCAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPPPRR*RGAARW
Trigger: CCACCTGGCTGCACCCCGTCACCGGCGAGGCGGTGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299275.10
ENST00000429027.7
CDS-3UTR TCA 90 bp TTGCTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCCAGGCCAGCTGGCACTaGCCTTCTGTCAGGCACATA +
Preference number: 4 (lower is better)
Translates to: LLFCLKNCWYSWGLSAEFQASWH*PSVRHI
Trigger: TATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTG...GAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR TCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTCTACCTTCATCTTGTaGCAGCTGATGATCCAAATA +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWSTFIL*QLMIQI
Trigger: TATTTGGATCATCAGCTGTCACAAGATGAAGGTAGA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTCTGTAGTACCTCTTTaGTGCTTATGTTTACTCAGC +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWSVVPL*CLCLLS
Trigger: GCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATTGGTCAGGAGCCAGGTaGTCTGCCTGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNWSGAR*SACLGL
Trigger: GAGGCCGAGGCAGGCAGATCACCTGGCTCCTGACCA...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAAGGCAAATCTGTGCTCTaGCGCCGGTGTCCGGTGACC +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQGKSVL*RRCPVT
Trigger: GGTCACCGGACACCGGCGGCAGAGCACAGATTTGCC...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TCTTGCTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTCAGCGTAAGCTCCTCTaGCGTTTTCCCTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SCSSVLRIAGTVGVLAPSQRKLL*RFPLEA
Trigger: AGCCTCCAAGGGAAAACGCCAGAGGAGCTTACGCTG...ACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATCCGCCGCCATGTCTaGTCCCTAGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKIRRHV*SLAAAA
Trigger: GGCGGCGGCGGCTAGGGATCAGACATGGCGGCGGAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR GCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTCGCCGGTGACGGGGTaGAGCCAGGTGGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVSPVTG*SQVVLL
Trigger: CAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTGTATTTGTATAATGTaGCTCTACCTTCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWCICIM*LYLHLV
Trigger: CACAAGATGAAGGTAGAGGCACATTATACAAATACA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGAAAGATACATGCACATaGATGTTTATAGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: WEIEAGRALELRSLRPAWKDTCT*MFIAAQ
Trigger: TTGTGCTGCTATAAACATGCATGTGCATGTATCTTT...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTCGGCCGCCCCTGGTaGTCCCGTAAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLGRPW*SRKSRT
Trigger: GGTCCTGGACTTACGGGATCACCAGGGGCGGCCGAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299275.10
ENST00000429027.7
CDS-3UTR TCA 90 bp CATTTGTTATGGAGAATAGGAAAGCTACTGGATAACGAAGACAATCAGTTTAGACTCGGCCGCCCCTGGTaGTCCCGTAAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: HLLWRIGKLLDNEDNQFRLGRPW*SRKSRT
Trigger: GGTCCTGGACTTACGGGATCACCAGGGGCGGCCGAG...TCTAAACTGATTGTCTTCGTTATCCAGTAGCTTTCCTATTCTCCATAACAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATGCACTCCAGTGTGGGTaGCAGGGTGAGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNALQCG*QGETWS
Trigger: AGACCAGGTCTCACCCTGTCACCCACACTGGAGTGC...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGCAGTGTAATTCACATTTCATTAAACCCACCTATGGTTAAGTGTACAGTTCAGTCGCCGGTGACGGGGTaGAGCCAGGTGGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSVIHISLNPPMVKCTVQSPVTG*SQVVLL
Trigger: CAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGA...CTGAACTGTACACTTAACCATAGGTGGGTTTAATGAAATGTGAATTACACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp GTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATTGGATGGGCCCTGTGTCTaGGGTCTATTGTCACATCTC +
Preference number: 4 (lower is better)
Translates to: VLRIAGTVGVLAPSSQSLDGPCV*GLLSHL
Trigger: GAGATGTGACAATAGACCGCAGACACAGGGCCCATC...CAATGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR GCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAACCTGGAGGAGGAGGTTaGAGTGAGCCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQPGGGG*SEPRSR
Trigger: GCGTGATCTTGGCTCACTGCAACCTCCTCCTCCAGG...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATTCACCCAGGCCGGAGTaGGATGGTGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNSPRPE*DGVISA
Trigger: AGCCGAGATCACACCATCGCACTCCGGCCTGGGTGA...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATCTGGCGTTTTCCCTTaGAGGCTCTGGGGACTAACA +
Preference number: 4 (lower is better)
Translates to: SVLRIAGTVGVLAPSSQSSGVFP*RLWGLT
Trigger: TGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCCAGA...TGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGATTGGCCGGGTGCAGTaGGTCACGCCAGCACTTTGG +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVIGRVQ*VTPALW
Trigger: CCAAAGTGCTGGCGTGACCCACTGCACCCGGCCAAT...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTGTGGTCCCAGCTACTTaGGAGGCTGTCGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIVVPAT*EAVVGG
Trigger: TCCTCCCACGACAGCCTCCCAAGTAGCTGGGACCAC...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTATCAGCCAGGCTTGGTaGCACAGGCGTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIISQAW*HRRVVP
Trigger: TGGGACCACACGCCTGTGCCACCAAGCCTGGCTGAT...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCAAAATCAGCCAGGCTTaGTGGCACAGGCGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAKISQA*WHRRVV
Trigger: GACCACACGCCTGTGCCACCAAGCCTGGCTGATTTT...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTCAGGCCAGCTGGCACTaGCCTTCTGTCAGGCACATA +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIQASWH*PSVRHI
Trigger: TATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTG...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCACAAGCTTTAGCTGCATaGGCTGTGCTAACGTATGCT +
Preference number: 4 (lower is better)
Translates to: LFCLKNCWYSWGLSAEFSQALAA*AVLTYA
Trigger: AGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTG...TGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR TCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGTGCACTCCAGCCTGCTaGCAGAGCGAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVCTPAC*QSETPS
Trigger: AGATGGAGTCTCGCTCTGTCAGCAGGCTGGAGTGCA...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATGAGGTGGGCGGATCATaGGGTCAAGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNEVGGS*GQEIET
Trigger: GGTCTCGATCTCTTGACCTCATGATCCGCCCACCTC...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCGCCGGTGACGGGGTaGAGCCAGGTGGTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSPVTG*SQVVLL
Trigger: CAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299275.10
ENST00000429027.7
CDS-3UTR GCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTGGATGGAACTGGCGATaGCGAGGACTCAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIGWNWR*RGLRRW
Trigger: CCATCTCCTGAGTCCTCGGCATCGCCAGTTCCATCC...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TCTTGCTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTCTACTCAGTTCGGCTTaGTGCCGTCTCAGCTTTATT +
Preference number: 4 (lower is better)
Translates to: SCSSVLRIAGTVGVLAPSLLSSA*CRLSFI
Trigger: AATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAG...ACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR GCA 90 bp CTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAAGCTGTGCTAACGTATaGTCCCGGATACTACTCAGT +
Preference number: 4 (lower is better)
Translates to: LFCLKNCWYSWGLSAEFSSCANV*SRILLS
Trigger: ACTGAGTAGTATCCGGGAGCATACGTTAGCACAGCT...TGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR GCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCCTGGCCTCCCAAAGTaGTGGCATTACCGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVPGLPK*WHYRTW
Trigger: CCAGGTGCGGTAATGCCAGCACTTTGGGAGGCCAGG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TTGCTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTTCCCTTGGAGGCTCTaGGGACTAACAGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLFCLKNCWYSWGLSAEFFPWRL*GLTDCK
Trigger: TTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAA...GAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCTGAGTGGATGGAACTaGCGATGCCGAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVLSGWN*RCRGLR
Trigger: CCTGAGTCCTCGGCATCGCCAGTTCCATCCACTCAG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCTGCGGCTGAGTGGATaGAACTGGCGATGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLRLSG*NWRCRG
Trigger: TCCTCGGCATCGCCAGTTCCATCCACTCAGCCGCAG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCATCCTCTCTGAATTGGTaGAGACACTTCCGATCTGTA +
Preference number: 4 (lower is better)
Translates to: LFCLKNCWYSWGLSAEFSSSLNW*RHFRSV
Trigger: TACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGA...TGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR TCA 90 bp TCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCAGTCACATCTCCTCTCTaGATTGGTGAAGACACTTCC +
Preference number: 4 (lower is better)
Translates to: SVLRIAGTVGVLAPSSQSVTSPL*IGEDTS
Trigger: GGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGAC...TGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCAGATTCGGGTGTTGGTaGTTTTGCTCTTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMARFGCW*FCSWRD
Trigger: GTCCCTCCAAGAGCAAAATCACCAACACCCGAATCT...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATTGAGCTCAGGAGCTTaGGATCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQLSSGA*DQPGQH
Trigger: ATGTTGCCCAGGCTGATCTCAAGCTCCTGAGCTCAA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGGGCAGGAGAATCACTTaGACCCTGGAGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVGRRIT*TLEEEV
Trigger: AACCTCCTCCTCCAGGGTTCAAGTGATTCTCCTGCC...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGGCAAATCTGTGCTCTaGCGCCGGTGTCCGGTGACC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKGKSVL*RRCPVT
Trigger: GGTCACCGGACACCGGCGGCAGAGCACAGATTTGCC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299275.10
ENST00000429027.7
CDS-3UTR GCA 90 bp TGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATTCTCAGTTCGGCTTGCTaGCGTCTCAGCTTTATTAGC +
Preference number: 4 (lower is better)
Translates to: CLKNCWYSWGLSAEFSIILSSAC*RLSFIS
Trigger: GCTAATAAAGCTGAGACGGCAGCAAGCCGAACTGAG...AATGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR GCA 90 bp GTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATTGGCCTCAAGCTTTAGCTaGATGAGCTGTGCTAACGTA +
Preference number: 4 (lower is better)
Translates to: VLRIAGTVGVLAPSSQSLASSFS*MSCANV
Trigger: TACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGC...CAATGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAACGAGGACTCAGGAGATaGGGACAGACTTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQRGLRR*GQTFHC
Trigger: GCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCTCG...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATTAATTGCTGGTACAGTTaGGGTCTTAGCGCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: CLKNCWYSWGLSAEFSIINCWYS*GLSAEF
Trigger: GAACTCGGCGCTAAGACCCCAACTGTACCAGCAATT...AATGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATCAGAAGGGAGAGGGTaGAAGGTCGGTGAAGGATTG +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQSEGRG*KVGEGL
Trigger: CAATCCTTCACCGACCTTCCACCCTCTCCCTTCTGA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTGGGTTTCTCCATGTTaGTCACGCTGGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIWVSPC*SRWSGA
Trigger: GGCTCCTGACCAGCGTGACCAACATGGAGAAACCCA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCTCTGTGAGCTGCGGCTaGGTGGATGGAACTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFSVSCG*VDGTGD
Trigger: ATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGA...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATGGCTGCAGTGAGCTGTaGTTATGCCACTACACTCCA +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNGCSEL*LCHYTP
Trigger: TGGAGTGTAGTGGCATAATCACAGCTCACTGCAGCC...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCCTTCAGTGAGCCATTaGGCCATGATCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVPSVSH*AMILHH
Trigger: GTGGTGCAAGATCATGGCTCAATGGCTCACTGAAGG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCAGCTGTGCTAACGTATaGTCCCGGATACTACTCAGT +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMASCANV*SRILLS
Trigger: ACTGAGTAGTATCCGGGAGCATACGTTAGCACAGCT...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCTTCCCTTGGAGGCTCTaGGGACTAACAGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAFPWRL*GLTDCK
Trigger: TTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAA...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTGCGGCTGAGTGGATaGAACTGGCGATGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLRLSG*NWRCRG
Trigger: TCCTCGGCATCGCCAGTTCCATCCACTCAGCCGCAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp CTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAAAGAATTTCATTCTTTaGGCTGTGGGCCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LFCLKNCWYSWGLSAEFSKNFIL*AVGLKL
Trigger: AAGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTT...TGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGTGCAACCACTGCCTCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVCNHCL*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGAGGCAGTGGTTGCA...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCTGAGCAGGGCATGCTaGCCCACTCTCATATTCAGA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLSRAC*PTLIFR
Trigger: TCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACAGGCCAGCTGGCACTaGCCTTCTGTCAGGCACATA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKQASWH*PSVRHI
Trigger: TATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATCCTTGTGGAGTTGCTaGAGTTTCTCTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQSLWSC*SFSSRA
Trigger: TGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTACGCTGAATTCCTGCTaGTTCCGTCTGAACTTCACC +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIITLNSC*FRLNFT
Trigger: GGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGT...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGTCTGTGTTTCATCTTaGGGGCTGAATGTAACATCC +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAVCVSS*GLNVTS
Trigger: GGATGTTACATTCAGCCCTCAAGATGAAACACAGAC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTGTGAGCTGCGGCTaGGTGGATGGAACTGGCGAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSVSCG*VDGTGD
Trigger: ATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAACAAGCTTTAGCTGCATaGGCTGTGCTAACGTATGCT +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQQALAA*AVLTYA
Trigger: AGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTG...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCTTGAATTCAGGAGTTTaGGACCAGCGTGGACAACTT +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMALNSGV*DQRGQL
Trigger: AAGTTGTCCACGCTGGTCTCAAACTCCTGAATTCAA...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATAGTGGGAGGGTAGCTTaGATTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNSGRVA*IQEFET
Trigger: GGTCTCAAACTCCTGAATTCAAGCTACCCTCCCACT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGAAGGTACACAACAATaGGATGCCTCCTTATTCCTG +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAEGTQQ*DASLFL
Trigger: CAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATGGAAGGGGTTACACTaGAGATACTTTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQWKGLH*RYFQAL
Trigger: CAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGGATGGAACTGGCGATaGCGAGGACTCAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKGWNWR*RGLRRW
Trigger: CCATCTCCTGAGTCCTCGGCATCGCCAGTTCCATCC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCTCAGTTCGGCTTGCTaGCGTCTCAGCTTTATTAGC +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVLSSAC*RLSFIS
Trigger: GCTAATAAAGCTGAGACGGCAGCAAGCCGAACTGAG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCATTCTGTCTTAAGAATTaGTGGTACAGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LFCLKNCWYSWGLSAEFSFCLKN*WYSWGL
Trigger: AAGACCCCAACTGTACCAGCAATTCTTAAGACAGAA...TGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAAGGGCAGCATCTAACATaGCTTTCATCCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQGQHLT*LSSTTP
Trigger: TGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCC...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGGTTCCAATTCGGCAGTaGCTCGAGAAAGTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVVPIRQ*LEKVLD
Trigger: GTCGAGAACTTTCTCGAGCCACTGCCGAATTGGAAC...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTGAGTGGATGGAACTaGCGATGCCGAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLSGWN*RCRGLR
Trigger: CCTGAGTCCTCGGCATCGCCAGTTCCATCCACTCAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTCTGGCGTTTTCCCTTaGAGGCTCTGGGGACTAACA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVSGVFP*RLWGLT
Trigger: TGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCCAGA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCAGCGTAAGCTCCTCTaGCGTTTTCCCTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFQRKLL*RFPLEA
Trigger: AGCCTCCAAGGGAAAACGCCAGAGGAGCTTACGCTG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCAGTGGCTCATGCAGTaGGAGGGTAGCTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVQWLMQ*EGSLNS
Trigger: TGAATTCAAGCTACCCTCCCACTGCATGAGCCACTG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGAAGAATGGCCATAATTaGCCGGGTGCAGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVKNGHN*PGAVGH
Trigger: GTGACCCACTGCACCCGGCCAATTATGGCCATTCTT...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATGTAATCTCAGCACTTTaGGAGATTGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNVISAL*EIEAGR
Trigger: TCTGCCCGCCTCAATCTCCCAAAGTGCTGAGATTAC...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCTGAACTGCTCAAGTTaGTTGGTCTGTAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVLNCSS*LVCSAQ
Trigger: CTGTGCACTACAGACCAATCAACTTGAGCAGTTCAG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATCTGGGCTCTGTaGCTTGGCATATTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAIIWAL*LGIFLG
Trigger: ACCAAGAAATATGCCAAGTCACAGAGCCCAGATTAT...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTGTCACATCTCCTCTCTaGATTGGTGAAGACACTTCC +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIVTSPL*IGEDTS
Trigger: GGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGAC...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGTGTAACACCACTGTCTaGATGGCTGCTGGGTTATCT +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVCNTTV*MAAGLS
Trigger: AGATAACCCAGCAGCCATTCAGACAGTGGTGTTACA...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGTACTCAGCCCTTCCATaGCATCCTGAATTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVYSALP*HPEFAK
Trigger: TTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTA...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCTGCACAGATACCAACTaGCAAAAACAGAAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMACTDTN*QKQKPL
Trigger: AAGAGGCTTCTGTTTTTGTCAGTTGGTATCTGTGCA...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGACAGAGCTGTTCCACTaGACTTCTTGGTCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVTELFH*TSWSFR
Trigger: ACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGT...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATCTACTCAGTTCGGCTTaGTGCCGTCTCAGCTTTATT +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNLLSSA*CRLSFI
Trigger: AATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAG...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGGCCTCAAGCTTTAGCTaGATGAGCTGTGCTAACGTA +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVASSFS*MSCANV
Trigger: TACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGC...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGGCAGCTATTGACCCGTaGGAAGGTGATGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVAAIDP*EGDVGI
Trigger: TATTCCCACATCACCTTCCCACGGGTCAATAGCTGC...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTACACCACTGTCTGAATaGCTGCTGGGTTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIITPLSE*LLGYLH
Trigger: ATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGT...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACAGCGTAAGCTCCTCTaGCGTTTTCCCTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKQRKLL*RFPLEA
Trigger: AGCCTCCAAGGGAAAACGCCAGAGGAGCTTACGCTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp TGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATTTGTCTTAAGAATTGCTaGTACAGTTGGGGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: CLKNCWYSWGLSAEFSIICLKNC*YSWGLS
Trigger: GCTAAGACCCCAACTGTACCAGCAATTCTTAAGACA...AATGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGATTAGCCTGGCATGGTaGCATACACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVISLAW*HTPVVP
Trigger: TGGGACTACAGGTGTATGCCACCATGCCAGGCTAAT...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAAGTTGGAGCTACACTATaGGTATGCAAAGGCATACAG +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQVGATL*VCKGIQ
Trigger: CTGTATGCCTTTGCATACCCATAGTGTAGCTCCAAC...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTGAGCAGGGCATGCTaGCCCACTCTCATATTCAGA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLSRAC*PTLIFR
Trigger: TCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATAATTTGTTCTCTGTATaGCTCGATCGGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNNLFSV*LDRPLC
Trigger: ACACAGAGGCCGATCGAGTCATACAGAGAACAAATT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCCTAATGTCTTGTCATaGGTGGAAGGGGTTACACTG +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVPNVLS*VEGVTL
Trigger: CAGTGTAACCCCTTCCACTCATGACAAGACATTAGG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAATGTGATCCTTCTGTaGGCTGCGGCTGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKNVILL*AAAEWM
Trigger: CATCCACTCAGCCGCAGCTCACAGAAGGATCACATT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGATGGGCCCTGTGTCTaGGGTCTATTGTCACATCTC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKDGPCV*GLLSHL
Trigger: GAGATGTGACAATAGACCGCAGACACAGGGCCCATC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTGCTGATAGCAAAGCTTaGTCAAGCGTGTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIADSKA*SSVYFS
Trigger: GGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGC...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGGACAGACTTTTCACTaGCATTGTTTGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAGQTFH*HCLISS
Trigger: AGAGGAAATCAAACAATGGCAGTGAAAAGTCTGTCC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGATGAACTGGGCCCCTaGTATAACAGAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKDELGP*YNRARS
Trigger: GCTCCTTGCTCTGTTATAGCAGGGGCCCAGTTCATC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATGCTACACTATGGGTATaGAAAGGCATACAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNATLWV*KGIQCG
Trigger: ACCACACTGTATGCCTTTGCATACCCATAGTGTAGC...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTGTCCGCATGTTTGGATaGGCTGCCTTAAAAGCATAT +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIVRMFG*AALKAY
Trigger: ATATGCTTTTAAGGCAGCCCATCCAAACATGCGGAC...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGACAGCGTTTTCCCTTaGAGGCTCTGGGGACTAACA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKDSVFP*RLWGLT
Trigger: TGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCTGTC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299275.10
CDS-3UTR CCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATTGTCTGAATGGCTGCTaGGTTATCTGCATGCATTTC +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNCLNGC*VICMHF
Trigger: GAAATGCATGCAGATAACCCAGCAGCCATTCAGACA...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTAGCTGCTCTTGCATCTaGTTCCTGGTAACAGTTACA +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIISCSCI*FLVTVT
Trigger: TGTAACTGTTACCAGGAACCAGATGCAAGAGCAGCT...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGTTCCACAGTCATCCTTaGTCGAGTACTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVFHSHP*SSTFSQ
Trigger: TTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAA...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGTTGCAGGAGTTTCATaGTCTGGCTTTACATCATTT +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAVAGVS*SGFTSF
Trigger: AAATGATGTAAAGCCAGACCATGAAACTCCTGCAAC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACGAGGACTCAGGAGATaGGGACAGACTTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRGLRR*GQTFHC
Trigger: GCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCTCG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTGGCGTTTTCCCTTaGAGGCTCTGGGGACTAACA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSGVFP*RLWGLT
Trigger: TGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCCAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAAGTGGAGGACGAGGTaGGACTACTTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKKWRTR*DYFLFL
Trigger: GAGGAAGAGGAAGTAGTCCCACCTCGTCCTCCACTT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGTTGCTGGTACAGTTaGGGTCTTAGCGCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSCWYS*GLSAEF
Trigger: GAACTCGGCGCTAAGACCCCAACTGTACCAGCAACT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424268.5
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTGGCATTACCGCACCTaGCCTCAACAGTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVWHYRT*PQQSFL
Trigger: TAGAAATGACTGTTGAGGCCAGGTGCGGTAATGCCA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTGATGGTTGTCCTGTaGCTGGATGTTTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVMVVL*LDVCRS
Trigger: TGACCTGCAAACATCCAGTCACAGGACAACCATCAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCGTAAGCAAAGCTATCTaGAAACTAGGTAACAGTATG +
Preference number: 4 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAVSKAI*KLGNSM
Trigger: CATACTGTTACCTAGTTTTCAGATAGCTTTGCTTAC...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAAGACTATTTTGTTCTCTaGACTGCTCAAGTTGATTGG +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQDYFVL*TAQVDW
Trigger: CCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTC...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACGCTGAATTCCTGCTaGTTCCGTCTGAACTTCACC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTLNSC*FRLNFT
Trigger: GGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGATTCGGGTGTTGGTaGTTTTGCTCTTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRFGCW*FCSWRD
Trigger: GTCCCTCCAAGAGCAAAATCACCAACACCCGAATCT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCTCAGGCACGCTTGTTaGTGTCTTCTTATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLRHAC*CLLILS
Trigger: GGAAAGAATAAGAAGACATCAACAAGCGTGCCTGAG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGTGGCAGTAACTGCTaGCATTGCAATCTGACCGAG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCGSNC*HCNLTE
Trigger: CTCGGTCAGATTGCAATGTCAGCAGTTACTGCCACA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATCCTACAATAAGGTGTaGAAGGAAGTAGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQSYNKV*KEVDSR
Trigger: TCTGGAATCTACTTCCTTTCACACCTTATTGTAGGA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCAAGCTCGTGAAGTTCTaGCTACAGGGCTCATTGGAT +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFKLVKF*LQGSLD
Trigger: ATCCAATGAGCCCTGTAGGCAGAACTTCACGAGCTT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATCGTCTGACAACCGGTaGATTAGGATTCCTTTTAAT +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQSSDNR*IRIPFN
Trigger: ATTAAAAGGAATCCTAATGCACCGGTTGTCAGACGA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTCATGTTTGGATGGGCTaGCTTAAAAGCATATTTGCG +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIHVWMG*LKSIFA
Trigger: CGCAAATATGCTTTTAAGGCAGCCCATCCAAACATG...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATCCTTTCCTGTATCAGTaGAGAAATAATAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNPFLYQ*RNNRSA
Trigger: TGCGGACCTATTATTTCTGCACTGATACAGGAAAGG...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTGTGTCGAGGGAGGGTaGTCTGTTTGTTATAAAACT +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIICVEGG*SVCYKT
Trigger: AGTTTTATAACAAACAGAGCACCCTCCCTCGACACA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTATCATATTCTCTCCATaGTCGTTCCAATTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIIIFSP*SFQFGS
Trigger: ACTGCCGAATTGGAACGAGCATGGAGAGAATATGAT...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATTGAACAATTTCTGTTaGAGGAGTTTCATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQLNNFC*RSFMVW
Trigger: CCAGACCATGAAACTCCTGCAACAGAAATTGTTCAA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTCAGTTCGGCTTGCTaGCGTCTCAGCTTTATTAGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLSSAC*RLSFIS
Trigger: GCTAATAAAGCTGAGACGGCAGCAAGCCGAACTGAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGCAGCTATTGACCCGTaGGAAGGTGATGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKAAIDP*EGDVGI
Trigger: TATTCCCACATCACCTTCCCACGGGTCAATAGCTGC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTTCCAATTCGGCAGTaGCTCGAGAAAGTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVPIRQ*LEKVLD
Trigger: GTCGAGAACTTTCTCGAGCCACTGCCGAATTGGAAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATTTCAGGATGCTCTTCTaGTTTATGATTTGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNFRMLF*FMICGL
Trigger: CAGACCGCAAATCATAAACCAGAAGAGCATCCTGAA...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp TCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCAGATGATCCAAATATATaGTGTTCCTTTGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SVLRIAGTVGVLAPSSQSDDPNI*CSFGDD
Trigger: ATCATCTCCAAAGGAACACCATATATTTGGATCATC...TGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAATTGCTGGTACAGTTaGGGTCTTAGCGCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKNCWYS*GLSAEF
Trigger: GAACTCGGCGCTAAGACCCCAACTGTACCAGCAATT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCAGGCAGATGAACTaGGCCCCTGCTATAACAGAG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFRQMN*APAITE
Trigger: CTCTGTTATAGCAGGGGCCCAGTTCATCTGCCTGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCTTGCAGCAACTTGGATaGAGCTGGAGGCCATTATTC +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFLQQLG*SWRPLF
Trigger: GAATAATGGCCTCCAGCTCCATCCAAGTTGCTGCAA...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCAATACAATTGTCCTGTaGTGGTTGTCCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFNTIVL*WLSCDW
Trigger: CCAGTCACAGGACAACCATCACAGGACAATTGTATT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTGAACTGCTCAAGTTaGTTGGTCTGTAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLNCSS*LVCSAQ
Trigger: CTGTGCACTACAGACCAATCAACTTGAGCAGTTCAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTTCCAACTGCTGCATTaGATTTGTTCTCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIFQLLH*ICSLYD
Trigger: GTCATACAGAGAACAAATTCAATGCAGCAGTTGGAA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCTAATGTCTTGTCATaGGTGGAAGGGGTTACACTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPNVLS*VEGVTL
Trigger: CAGTGTAACCCCTTCCACTCATGACAAGACATTAGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTCACATCTCCTCTCTaGATTGGTGAAGACACTTCC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVTSPL*IGEDTS
Trigger: GGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCCTTGTGGAGTTGCTaGAGTTTCTCTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSLWSC*SFSSRA
Trigger: TGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGTAACACCACTGTCTaGATGGCTGCTGGGTTATCT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCNTTV*MAAGLS
Trigger: AGATAACCCAGCAGCCATTCAGACAGTGGTGTTACA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATACTCAGCCCTTCCATaGCATCCTGAATTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKYSALP*HPEFAK
Trigger: TTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTTCACTGCCATTGTTTaGTTTCCTCTAGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIFTAIV*FPLETS
Trigger: TGAGGTTTCTAGAGGAAATCAAACAATGGCAGTGAA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACAAGCTTTAGCTGCATaGGCTGTGCTAACGTATGCT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKQALAA*AVLTYA
Trigger: AGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR TCA 90 bp CATTTGTTATGGAGAATAGGAAAGCTACTGGATAACGAAGACAATCAGTTTAGATTCATTTTCCCCCAGTaGATTCCTTGGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: HLLWRIGKLLDNEDNQFRFIFPQ*IPWVPL
Trigger: CAGAGGTACCCAAGGAATTCACTGGGGGAAAATGAA...TCTAAACTGATTGTCTTCGTTATCCAGTAGCTTTCCTATTCTCCATAACAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTTCAGATGTCATGGTTaGAACAGTCTGTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIFRCHG*NSLFIH
Trigger: GTGAATGAACAGACTGTTGCAACCATGACATCTGAA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAAGCTCGTGAAGTTCTaGCTACAGGGCTCATTGGAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKKLVKF*LQGSLD
Trigger: ATCCAATGAGCCCTGTAGGCAGAACTTCACGAGCTT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCACTGTTCCAACTGCTaGATTGAATTTGTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVHCSNC*IEFVLC
Trigger: ACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGGAAGGGGTTACACTaGAGATACTTTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKWKGLH*RYFQAL
Trigger: CAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGTTCTCTTCCAGAGCATaGACCACTTTATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVFSSRA*TTLSCS
Trigger: TGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAA...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACACTGTCTGAATGGCTaGTGGGTTATCTGCATGCAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKHCLNG*WVICMH
Trigger: ATGCATGCAGATAACCCAGCAGCCATTCAGACAGTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACAGAGCTGTTCCACTaGACTTCTTGGTCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTELFH*TSWSFR
Trigger: ACGGAAAGACCAAGAAGTGCAGTGGAACAGCTCTGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTACTCAGTTCGGCTTaGTGCCGTCTCAGCTTTATT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLLSSA*CRLSFI
Trigger: AATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGCTGTGCTAACGTATaGTCCCGGATACTACTCAGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSCANV*SRILLS
Trigger: ACTGAGTAGTATCCGGGAGCATACGTTAGCACAGCT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGCCTCAAGCTTTAGCTaGATGAGCTGTGCTAACGTA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKASSFS*MSCANV
Trigger: TACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATAGGTCCGCATGTTTaGATGGGCTGCCTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKIGPHV*MGCLKS
Trigger: GCTTTTAAGGCAGCCCATCCAAACATGCGGACCTAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGGGCAGCATCTAACATaGCTTTCATCCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKGQHLT*LSSTTP
Trigger: TGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCACTGCTCAAGTTGATTaGTCTGTAGTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFTAQVD*SVVHSL
Trigger: CAGACTGTGCACTACAGACCAATCAACTTGAGCAGT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGAAGAAATTACTCCCCTaGTTTCTTCTTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVKKLLP*FLLHDP
Trigger: GGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTT...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCCCTTGGAGGCTCTaGGGACTAACAGACTGTAAA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFPWRL*GLTDCK
Trigger: TTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACACCACTGTCTGAATaGCTGCTGGGTTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTPLSE*LLGYLH
Trigger: ATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGAAGAATTTCATTCTTTaGGCTGTGGGCCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVKNFIL*AVGLKL
Trigger: AAGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTT...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCATCGTTTTCCCTTaGAGGCTCTGGGGACTAACA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFIVFP*RLWGLT
Trigger: TGTTAGTCCCCAGAGCCTCCAAGGGAAAACGATGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424268.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTTGTGACAGTTGCTaGTACAGTTGGGGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSCDSC*YSWGLS
Trigger: GCTAAGACCCCAACTGTACCAGCAACTGTCACAAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424268.5
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCCACCAACCAAGGAGTaGATAAAGAAAATGTGGTTT +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVPPTKE*IKKMWF
Trigger: AAACCACATTTTCTTTATCCACTCCTTGGTTGGTGG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAATACAATTGTCCTGTaGTGGTTGTCCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKNTIVL*WLSCDW
Trigger: CCAGTCACAGGACAACCATCACAGGACAATTGTATT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATATGCACTGCATAATCTaGAGTCACGTTATAGTTAGA +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNMHCII*SHVIVR
Trigger: TCTAACTATAACGTGACTTCAGATTATGCAGTGCAT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAATTTGTTCTCTGTATaGCTCGATCGGCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKNLFSV*LDRPLC
Trigger: ACACAGAGGCCGATCGAGTCATACAGAGAACAAATT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCCTCTCTGAATTGGTaGAGACACTTCCGATCTGTA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSSLNW*RHFRSV
Trigger: TACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTCAGGCACGCTTGTTaGTGTCTTCTTATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLRHAC*CLLILS
Trigger: GGAAAGAATAAGAAGACATCAACAAGCGTGCCTGAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTCTGTGTTTCATCTTaGGGGCTGAATGTAACATCC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVCVSS*GLNVTS
Trigger: GGATGTTACATTCAGCCCTCAAGATGAAACACAGAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCTGCTCTTCTGGTTTATaGTTTGCGGTCTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFCSSGL*FAVCVS
Trigger: TGAAACACAGACCGCAAATCATAAACCAGAAGAGCA...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFTFKSI*FFPASR
Trigger: CCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCTCCACCTCTAAGATCTaGCAGGCTAACATTGACTAT +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFSTSKI*QANIDY
Trigger: ATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGA...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTTCAGGCCTTGTCTTaGTGTTTCTTGGGAGTGTTC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFQALS*CFLGVF
Trigger: GAACACTCCCAAGAAACAGCAAGACAAGGCCTGAAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGCTGATAGCAAAGCTTaGTCAAGCGTGTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKADSKA*SSVYFS
Trigger: GGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCGTAGTACCTCTTTGCTaGTTATGTTTACTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFVVPLC*LCLLSP
Trigger: AGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTAC...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTTTCTGGTTTATGATTTaGGGTCTGTGTTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIFWFMI*GLCFIL
Trigger: CAAGATGAAACACAGACCGCAAATCATAAACCAGAA...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTATAGCAGCACAATTTaGAACTCCAAGGGTATGGAA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVYSSTI*NSKGME
Trigger: TTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTCCGCATGTTTGGATaGGCTGCCTTAAAAGCATAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVRMFG*AALKAY
Trigger: ATATGCTTTTAAGGCAGCCCATCCAAACATGCGGAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATTAGCACTCTATGGTTaGGAATGTTATTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQLALYG*ECYWFL
Trigger: AAGAAACCAATAACATTCCCAACCATAGAGTGCTAA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACTGCTCAAGTTGATTaGTCTGTAGTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTAQVD*SVVHSL
Trigger: CAGACTGTGCACTACAGACCAATCAACTTGAGCAGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGTCTGAATGGCTGCTaGGTTATCTGCATGCATTTC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCLNGC*VICMHF
Trigger: GAAATGCATGCAGATAACCCAGCAGCCATTCAGACA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGCTGCTCTTGCATCTaGTTCCTGGTAACAGTTACA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSCSCI*FLVTVT
Trigger: TGTAACTGTTACCAGGAACCAGATGCAAGAGCAGCT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCCACAGTCATCCTTaGTCGAGTACTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFHSHP*SSTFSQ
Trigger: TTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTTTGTAAGGGTGACTaGTCTGAAGCACCGATAACA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLCKGD*SEAPIT
Trigger: TGTTATCGGTGCTTCAGACCAGTCACCCTTACAAAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGAGGAGTTTCATGGTCTaGCTTTACATCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVRSFMV*LYIIFS
Trigger: AGAGAAAATGATGTAAAGCCAGACCATGAAACTCCT...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCAATCCCATCAAAAAGTaGGCAAATGACGCGAATAGG +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFNPIKK*ANDANR
Trigger: CCTATTCGCGTCATTTGCCCACTTTTTGATGGGATT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000538714.5
3UTR CAA 72 bp CTACCTTCATCTTGTGACAGACAATATAGACTTATCTaGCTCTTCTGTCTTAAGAATTGCTGGTACAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPSSCDRQYRLI*LFCLKNCWYSW
Trigger: CCAACTGTACCAGCAATTCTTAAGACAGAAGAGCAAGATAAGTCTATATTGTCTGTCACAAGATGAAGGTAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATAATCTGGGCTCTGTaGCTTGGCATATTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKIIWAL*LGIFLG
Trigger: ACCAAGAAATATGCCAAGTCACAGAGCCCAGATTAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGCTCTTCTGGTTTATaGTTTGCGGTCTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCSSGL*FAVCVS
Trigger: TGAAACACAGACCGCAAATCATAAACCAGAAGAGCA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGCTGACATTGCAATCTaGCCGAGAAAGAATTATAGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKADIAI*PRKNYS
Trigger: GCTATAATTCTTTCTCGGTCAGATTGCAATGTCAGC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAAATTACATGCTTCCTaGCAGAACGATGACAAAGGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKKLHAS*QNDDKG
Trigger: CCCTTTGTCATCGTTCTGTCAGGAAGCATGTAATTT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424268.5
CDS-3UTR TCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTTGGTATGGATGTGGTaGGAAGAAAACACTTTTACA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLVWMW*EENTFT
Trigger: TGTAAAAGTGTTTTCTTCTCACCACATCCATACCAA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTFKSI*FFPASR
Trigger: CCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299275.10
ENST00000429027.7
CDS-3UTR GCA 90 bp CATTTGTTATGGAGAATAGGAAAGCTACTGGATAACGAAGACAATCAGTTTAGAACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HLLWRIGKLLDNEDNQFRTFKSI*FFPASR
Trigger: CCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGT...TCTAAACTGATTGTCTTCGTTATCCAGTAGCTTTCCTATTCTCCATAACAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACATGTTTGGATGGGCTaGCTTAAAAGCATATTTGCG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKHVWMG*LKSIFA
Trigger: CGCAAATATGCTTTTAAGGCAGCCCATCCAAACATG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCTTTCCTGTATCAGTaGAGAAATAATAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPFLYQ*RNNRSA
Trigger: TGCGGACCTATTATTTCTGCACTGATACAGGAAAGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCCACCTCTAAGATCTaGCAGGCTAACATTGACTAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSTSKI*QANIDY
Trigger: ATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGTGTCGAGGGAGGGTaGTCTGTTTGTTATAAAACT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCVEGG*SVCYKT
Trigger: AGTTTTATAACAAACAGAGCACCCTCCCTCGACACA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATCATATTCTCTCCATaGTCGTTCCAATTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKIIFSP*SFQFGS
Trigger: ACTGCCGAATTGGAACGAGCATGGAGAGAATATGAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTAGTACCTCTTTGCTaGTTATGTTTACTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVVPLC*LCLLSP
Trigger: AGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCGGATTTGGAAACCTaGTTATTGCTGTACACATGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPDLET*LLLYTC
Trigger: ACATGTGTACAGCAATAAGCAGGTTTCCAAATCCGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp TGCAGTGTAATTCACATTTCATTAAACCCACCTATGGTTAAGTGTACAGTTCAGGACAAATATGTGATTTaGCTGTACTTTCTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: CSVIHISLNPPMVKCTVQDKYVI*LYFLPV
Trigger: GACTGGGAGAAAGTACAGGCAAATCACATATTTGTC...CTGAACTGTACACTTAACCATAGGTGGGTTTAATGAAATGTGAATTACACTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGAAAACACTTTTACACTaGTGGTGGGAATGTAAACTA +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVKTLLH*WWECKL
Trigger: TAGTTTACATTCCCACCAGCAGTGTAAAAGTGTTTT...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR GCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATATGGGAGGAAATATTTaGAAACTATGCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNMGGNI*KLCIQQ
Trigger: TTGTTGGATGCATAGTTTGCAAATATTTCCTCCCAT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAAGAAATTACTCCCCTaGTTTCTTCTTCATGACCCC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKKKLLP*FLLHDP
Trigger: GGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGATAGAGTGCATTGTCTaGTCAGAAATATTTACCATG +
Preference number: 4 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVIECIV*SEIFTM
Trigger: CATGGTAAATATTTCTGACCAGACAATGCACTCTAT...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTTCTATCTCTTGGCTaGCTGATAGCAAAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFLSLG*LIAKLA
Trigger: AGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCACTCCAACAGGAAAGTaGGAACCTTTAACAACTGAA +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFTPTGK*EPLTTE
Trigger: TTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCAGGATGCTCTTCTaGTTTATGATTTGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFRMLF*FMICGL
Trigger: CAGACCGCAAATCATAAACCAGAAGAGCATCCTGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAAGAATTTCATTCTTTaGGCTGTGGGCCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKKNFIL*AVGLKL
Trigger: AAGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATGATGATCCAAATATATaGTGTTCCTTTGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNDDPNI*CSFGDD
Trigger: ATCATCTCCAAAGGAACACCATATATTTGGATCATC...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGTCTTAAGAATTGCTaGTACAGTTGGGGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCLKNC*YSWGLS
Trigger: GCTAAGACCCCAACTGTACCAGCAATTCTTAAGACA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp TGCAGTGTAATTCACATTTCATTAAACCCACCTATGGTTAAGTGTACAGTTCAGCCTGCATACAGATACTaGAACTTCCATTACATCTTC +
Preference number: 4 (lower is better)
Translates to: CSVIHISLNPPMVKCTVQPAYRY*NFHYIF
Trigger: GAAGATGTAATGGAAGTTCCAGTATCTGTATGCAGG...CTGAACTGTACACTTAACCATAGGTGGGTTTAATGAAATGTGAATTACACTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCTACGGAAAACAGTGTaGAGATTCCTTAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLRKTV*RFLKEL
Trigger: TAGTTCTTTAAGGAATCTCCACACTGTTTTCCGTAG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGACTATTTTGTTCTCTaGACTGCTCAAGTTGATTGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKDYFVL*TAQVDW
Trigger: CCAATCAACTTGAGCAGTTCAGAGAACAAAATAGTC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCCAACTGCTGCATTaGATTTGTTCTCTGTATGAC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFQLLH*ICSLYD
Trigger: GTCATACAGAGAACAAATTCAATGCAGCAGTTGGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCAGAAACCTCAGGAGTTaGTTCGTAAGAAATAACAGT +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFRNLRS*FVRNNS
Trigger: ACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCACTGCCATTGTTTaGTTTCCTCTAGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFTAIV*FPLETS
Trigger: TGAGGTTTCTAGAGGAAATCAAACAATGGCAGTGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp TGTGTGCACACGTTTTCATTCTTAACATACTTACGTAGTAAAATTGCTTGGTCATTCTTCTCCAAGGTATaGTCTACTAGGAATGAGGAA +
Preference number: 4 (lower is better)
Translates to: CVHTFSFLTYLRSKIAWSFFSKV*STRNEE
Trigger: TTCCTCATTCCTAGTAGATCATACCTTGGAGAAGAA...TGACCAAGCAATTTTACTACGTAAGTATGTTAAGAATGAAAACGTGTGCACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR TCA 90 bp CATTTGTTATGGAGAATAGGAAAGCTACTGGATAACGAAGACAATCAGTTTAGATCCATTCACAGTAGTTaGCAGACATTTGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: HLLWRIGKLLDNEDNQFRSIHSS*QTFALL
Trigger: TAACAGTGCAAATGTCTGTCAACTACTGTGAATGGA...TCTAAACTGATTGTCTTCGTTATCCAGTAGCTTTCCTATTCTCCATAACAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCAGATGTCATGGTTaGAACAGTCTGTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFRCHG*NSLFIH
Trigger: GTGAATGAACAGACTGTTGCAACCATGACATCTGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCGTCTGACAACCGGTaGATTAGGATTCCTTTTAAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSSDNR*IRIPFN
Trigger: ATTAAAAGGAATCCTAATGCACCGGTTGTCAGACGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACACTGTTCCAACTGCTaGATTGAATTTGTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKHCSNC*IEFVLC
Trigger: ACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCTCTTCCAGAGCATaGACCACTTTATCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFSSRA*TTLSCS
Trigger: TGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTGTAGTACCTCTTTaGTGCTTATGTTTACTCAGC +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSVVPL*CLCLLS
Trigger: GCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTGAACAATTTCTGTTaGAGGAGTTTCATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLNNFC*RSFMVW
Trigger: CCAGACCATGAAACTCCTGCAACAGAAATTGTTCAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGGACAGACTTTTCACTaGCATTGTTTGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKGQTFH*HCLISS
Trigger: AGAGGAAATCAAACAATGGCAGTGAAAAGTCTGTCC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGCACCTTTACTTATGTaGTCTGAAATCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKAPLLM*SEIIAA
Trigger: TGCTGCTATGATTTCAGAGCACATAAGTAAAGGTGC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCTGTCTTAAGAATTaGTGGTACAGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFCLKN*WYSWGL
Trigger: AAGACCCCAACTGTACCAGCAATTCTTAAGACAGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCTTTCTTCAGATGTCATaGTTGCAACAGTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFFLQMS*LQQSVH
Trigger: ATGAACAGACTGTTGCAACCATGACATCTGAAGAAA...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGGTAGAGTCTATAATCTaGACCCTCATTTTTGTACTT +
Preference number: 4 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVVESII*TLIFVL
Trigger: AAGTACAAAAATGAGGGTCCAGATTATAGACTCTAC...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACTCCAACAGGAAAGTaGGAACCTTTAACAACTGAA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTPTGK*EPLTTE
Trigger: TTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTTGCAGGAGTTTCATaGTCTGGCTTTACATCATTT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVAGVS*SGFTSF
Trigger: AAATGATGTAAAGCCAGACCATGAAACTCCTGCAAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTAGAGTCTATAATCTaGACCACAGTGAGATCCATT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVESII*TTVRSI
Trigger: AATGGATCTCACTGTGGTCCAGATTATAGACTCTAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACTCCAACAGGAAAGTaGGAACCTATTTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTPTGK*EPISVV
Trigger: TACTACAGAAATAGGTTCCCACTTTCCTGTTGGAGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538972.1
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATGCACTGCATAATCTaGAGTCACGTTATAGTTAGA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKMHCII*SHVIVR
Trigger: TCTAACTATAACGTGACTTCAGATTATGCAGTGCAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTAAGCAAAGCTATCTaGAAACTAGGTAACAGTATG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVSKAI*KLGNSM
Trigger: CATACTGTTACCTAGTTTTCAGATAGCTTTGCTTAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR TCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGAAACCTCAGGAGTTaGTTCGTAAGAAATAACAGT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRNLRS*FVRNNS
Trigger: ACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR TCA 90 bp TGTGTGCACACGTTTTCATTCTTAACATACTTACGTAGTAAAATTGCTTGGTCAACAAGCATTCTGAGGTaGGTAATCAAAGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: CVHTFSFLTYLRSKIAWSTSILR*VIKDLE
Trigger: TTCCAAATCTTTGATTACTCACCTCAGAATGCTTGT...TGACCAAGCAATTTTACTACGTAAGTATGTTAAGAATGAAAACGTGTGCACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCTGGTTTATGATTTaGGGTCTGTGTTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFWFMI*GLCFIL
Trigger: CAAGATGAAACACAGACCGCAAATCATAAACCAGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTTCTTCAGATGTCATaGTTGCAACAGTCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFLQMS*LQQSVH
Trigger: ATGAACAGACTGTTGCAACCATGACATCTGAAGAAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCAGAAATATTTACCATaGTTTTGGGACTACTCAAAG +
Preference number: 4 (lower is better)
Translates to: TKTNNPIKKWANDANRHFQKYLP*FWDYSK
Trigger: CTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGGAGTTTCATGGTCTaGCTTTACATCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRSFMV*LYIIFS
Trigger: AGAGAAAATGATGTAAAGCCAGACCATGAAACTCCT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATACGAAGTGTACATATaGGCCATTAAAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKYEVYI*AIKAVL
Trigger: CAAAACAGCTTTAATGGCCCATATGTACACTTCGTA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CCA 90 bp TGCAGTGTAATTCACATTTCATTAAACCCACCTATGGTTAAGTGTACAGTTCAGTTTTCATGTGCTCACTaGCTATTTGAGTATATTCTC +
Preference number: 4 (lower is better)
Translates to: CSVIHISLNPPMVKCTVQFSCAH*LFEYIL
Trigger: GAGAATATACTCAAATAGCCAGTGAGCACATGAAAA...CTGAACTGTACACTTAACCATAGGTGGGTTTAATGAAATGTGAATTACACTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR GCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGTATTTGTATAATGTaGCTCTACCTTCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCICIM*LYLHLV
Trigger: CACAAGATGAAGGTAGAGGCACATTATACAAATACA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTAGCACTCTATGGTTaGGAATGTTATTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLALYG*ECYWFL
Trigger: AAGAAACCAATAACATTCCCAACCATAGAGTGCTAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACAGAAATATTTACCATaGTTTTGGGACTACTCAAAG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKQKYLP*FWDYSK
Trigger: CTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATAGAGTGCATTGTCTaGTCAGAAATATTTACCATG +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKIECIV*SEIFTM
Trigger: CATGGTAAATATTTCTGACCAGACAATGCACTCTAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTAGAGTCTATAATCTaGACCCTCATTTTTGTACTT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVESII*TLIFVL
Trigger: AAGTACAAAAATGAGGGTCCAGATTATAGACTCTAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299275.10
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGATGATCCAAATATATaGTGTTCCTTTGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKDDPNI*CSFGDD
Trigger: ATCATCTCCAAAGGAACACCATATATTTGGATCATC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CCA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTGAGATCCATTTCTTaGATATCCTTGAACTTGATA +
Preference number: 4 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVRSIS*ISLNLI
Trigger: TATCAAGTTCAAGGATATCCAAGAAATGGATCTCAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424268.5
ENST00000429027.7
CDS GCA 90 bp GGATCGCCAGCAACTGAGGCTGCGAACGCCTCCTCCGGCTCCGGCTaGTCCTCCCGTGGCAGGAGGGAACGCGCCAAGCGTTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: GSPATEAANASSGSG*SSRGRRERAKRFPS
Trigger: GCTCGGGAAACGCTTGGCGCGTTCCCTCCTGCCACGGGAGGAGCAGCCGGAGCCGGAGGAGGCGTTCGCAGCCTCAGTTGCTGGCGATCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538034.5
CDS GCA 90 bp CTCTGCCGCCGGTGTCCGGTGACCACCGCCTCGCCGGTGACGGGGTaGAGCCAGGTGGTGCTCTTGGCCTCCTCGTTGATGAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: LCRRCPVTTASPVTG*SQVVLLASSLMKKT
Trigger: AGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGAGGCGGTGGTCACCGGACACCGGCGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299275.10
ENST00000429027.7
ENST00000538714.5
ENST00000539256.5
ENST00000540972.5
CDS-3UTR CAA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGCAGCACTTTGGGAGATaGAGGCGGGCAGAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: WEIEAGRALELRSLRPAWQHFGR*RRAERL
Trigger: CAAGCGCTCTGCCCGCCTCAATCTCCCAAAGTGCTG...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGCCTGATAAGCAGCTATaGACCCGTGGGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: WEIEAGRALELRSLRPAWPDKQL*TRGKVM
Trigger: CATCACCTTCCCACGGGTCAATAGCTGCTTATCAGG...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS GCA 90 bp AGCTGTGCTAACGTATGCTCCCGGATACTACTCAGTTCGGCTTGCTaGCGTCTCAGCTTTATTAGCAGCAGCGTAAGCTCCTCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: SCANVCSRILLSSAC*RLSFISSSVSSSGV
Trigger: AACGCCAGAGGAGCTTACGCTGCTGCTAATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAGTATCCGGGAGCATACGTTAGCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429027.7
ENST00000538677.1
ENST00000538714.5
CDS-3UTR CAA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTTACATAGGAAGCTATaGTCGAAGATTCGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: WEIEAGRALELRSLRPAWLHRKL*SKIRVL
Trigger: CAACACCCGAATCTTCGACAATAGCTTCCTATGTAA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGGGTCACGCCAGCACTTaGGGAGGCCGAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVGHAST*GGRGGR
Trigger: CCGCCCACCTCGGCCTCCCAAAGTGCTGGCGTGACC...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS TCA 90 bp ATGGACCTCCGTTTCTCCTCCGCTCCGGGTCCTAATGTCTTGTCATaGGTGGAAGGGGTTACACTGCAGATACTTTCAGGCCTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: MDLRFSSAPGPNVLS*VEGVTLQILSGLVL
Trigger: CAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGAGGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CCA 90 bp ACCTCCGTTTCTCCTCCGCTCCGGGTCCTAATGTCTTGTCATGAGTaGAAGGGGTTACACTGCAGATACTTTCAGGCCTTGTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: TSVSPPLRVLMSCHE*KGLHCRYFQALSCC
Trigger: ACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS-3UTR CAA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTGGTTGGGAATGTTATaGGTTTCTTTAGTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: WEIEAGRALELRSLRPAWWLGML*VSLVGA
Trigger: TGCACCAACTAAAGAAACCAATAACATTCCCAACCA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TGGGAGATTGAGGCGGGCAGAGCGCTTGAGCTCAGGAGTTTGAGACCAGCCTGGTCTTATTCTTTCCATTaGCTCTTCCACAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: WEIEAGRALELRSLRPAWSYSFH*LFHSHP
Trigger: AGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGA...CCAGGCTGGTCTCAAACTCCTGAGCTCAAGCGCTCTGCCCGCCTCAATCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS TCA 90 bp GGCCCTGTGTCTGCGGTCTATTGTCACATCTCCTCTCTGAATTGGTaGAGACACTTCCGATCTGTAAGTTCGTTGAGGGGAGTATCCCTG +
Preference number: 5 (lower is better)
Translates to: GPVSAVYCHISSLNW*RHFRSVSSLRGVSL
Trigger: CAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538677.1
ENST00000538714.5
ENST00000539256.5
CDS-3UTR CAA 90 bp GTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATTGCTCTGGCGTTTTCCCTaGGAGGCTCTGGGGACTAAC +
Preference number: 5 (lower is better)
Translates to: VLRIAGTVGVLAPSSQSLLWRFP*EALGTN
Trigger: GTTAGTCCCCAGAGCCTCCAAGGGAAAACGCCAGAG...CAATGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS CCA 90 bp AGGGGTTACACTGCAGATACTTTCAGGCCTTGTCTTGCTGTTTCTTaGGAGTGTTCTATAACCTTCAGGGTAGCGGGCCATAATCTGGGC +
Preference number: 5 (lower is better)
Translates to: RGYTADTFRPCLAVS*ECSITFRVAGHNLG
Trigger: GCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAGGCCTGAAAGTATCTGCAGTGTAACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CCA 90 bp GGGGATTATGGGAGGCTGCTCTGTAAAGTCATAGGACCGAGGAAGTaGAGGACGAGGTGGGACTACTTCCTCTTCCTCATTTTTGTACTT +
Preference number: 5 (lower is better)
Translates to: GDYGRLLCKVIGPRK*RTRWDYFLFLIFVL
Trigger: AAGTACAAAAATGAGGAAGAGGAAGTAGTCCCACCTCGTCCTCCACTTCCTCGGTCCTATGACTTTACAGAGCAGCCTCCCATAATCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS TCA 90 bp GCTCAAGTTGATTGGTCTGTAGTGCACAGTCTGAGCAGGGCATGCTaGCCCACTCTCATATTCAGATGGCAGAGAATTCAGCTTTACACT +
Preference number: 5 (lower is better)
Translates to: AQVDWSVVHSLSRAC*PTLIFRWQRIQLYT
Trigger: AGTGTAAAGCTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATCAACTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS TCA 90 bp CCTCAAGGTTACATAGGAAGCTATTGTCGAAGATTCGGGTGTTGGTaGTTTTGCTCTTGGAGGGACTACTCCAACAGGAAAGTGGGAACC +
Preference number: 5 (lower is better)
Translates to: PQGYIGSYCRRFGCW*FCSWRDYSNRKVGT
Trigger: GGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTAACCTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS TCA 90 bp AAAGAATTTCATTCTTTGGGCTGTGGGCCTCAAGCTTTAGCTGCATaGGCTGTGCTAACGTATGCTCCCGGATACTACTCAGTTCGGCTT +
Preference number: 5 (lower is better)
Translates to: KEFHSLGCGPQALAA*AVLTYAPGYYSVRL
Trigger: AAGCCGAACTGAGTAGTATCCGGGAGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429027.7
ENST00000538677.1
ENST00000538714.5
CDS GCA 90 bp TGTGAAAGAATTTCATTCTTTGGGCTGTGGGCCTCAAGCTTTAGCTaGATGAGCTGTGCTAACGTATGCTCCCGGATACTACTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: CERISFFGLWASSFS*MSCANVCSRILLSS
Trigger: CGAACTGAGTAGTATCCGGGAGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429027.7
ENST00000538677.1
ENST00000538714.5
CDS-3UTR CAA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTCTCTTGGCCTCCTCGTaGATGAAGAAGACTCGGCCG +
Preference number: 5 (lower is better)
Translates to: RRYTTMRCLLIPARMAIILLASS*MKKTRP
Trigger: CGGCCGAGTCTTCTTCATCAACGAGGAGGCCAAGAG...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TCTGTGTCTGGCTCTTTTAGGCAGCATCAAGGTTTTAAAGTTCAGTCATCGTATCTCTTGGCCTCCTCGTaGATGAAGAAGACTCGGCCG +
Preference number: 5 (lower is better)
Translates to: SVSGSFRQHQGFKVQSSYLLASS*MKKTRP
Trigger: CGGCCGAGTCTTCTTCATCAACGAGGAGGCCAAGAG...ATACGATGACTGAACTTTAAAACCTTGATGCTGCCTAAAAGAGCCAGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR CAA 90 bp TCTTGCTCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTCGATCTGTAAGTTCGTaGAGGGGAGTATCCCTGATA +
Preference number: 5 (lower is better)
Translates to: SCSSVLRIAGTVGVLAPSRSVSS*RGVSLI
Trigger: TATCAGGGATACTCCCCTCAACGAACTTACAGATCG...ACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CAA 90 bp TCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAAACTACTCAGTTCGGCTaGCTGCCGTCTCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: SSVLRIAGTVGVLAPSSQTTQFG*LPSQLY
Trigger: ATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAGT...TTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CAA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAAAGGCAGGAGAATCACTaGAACCCTGGAGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQRQENH*NPGGGG
Trigger: ACCTCCTCCTCCAGGGTTCAAGTGATTCTCCTGCCT...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATCTGGGTTTCTCCATGTaGGTCACGCTGGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNLGFSM*VTLVRS
Trigger: GCTCCTGACCAGCGTGACCAACATGGAGAAACCCAG...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS GCA 90 bp TTACCATGGTTTTGGGACTACTCAAAGTACTGTGTCGAGGGAGGGTaGTCTGTTTGTTATAAAACTGACGCTGCTGCCATTCGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: LPWFWDYSKYCVEGG*SVCYKTDAAAIRRA
Trigger: AGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACCCTCCCTCGACACAGTACTTTGAGTAGTCCCAAAACCATGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS GCA 90 bp GAGGTATCTGGGATTTATATAGTATCTTGCACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGGCAAATCTGTGCTCTGCCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: EVSGIYIVSCTFKSI*FFPASRQICALPPV
Trigger: CACCGGCGGCAGAGCACAGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGTGCAAGATACTATATAAATCCCAGATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535357.5
CDS CCA 90 bp TCTGAATGGCTGCTGGGTTATCTGCATGCATTTCTATCTCTTGGCTaGCTGATAGCAAAGCTTGCTCAAGCGTGTATTTCTCCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: SEWLLGYLHAFLSLG*LIAKLAQACISPCG
Trigger: TCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538068.1
ENST00000538714.5
ENST00000539256.5
CDS CCA 90 bp ATATCCTTGAACTTGATACATCTTCTTTTCTTCAGGCAGATGAACTaGGCCCCTGCTATAACAGAGCAAGGAGCTGCTATCACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ISLNLIHLLFFRQMN*APAITEQGAAITGQ
Trigger: CTGCCCAGTGATAGCAGCTCCTTGCTCTGTTATAGCAGGGGCCCAGTTCATCTGCCTGAAGAAAAGAAGATGTATCAAGTTCAAGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS-3UTR CAA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCTGCCTACAGGGCTCATaGGATGCACTGCATAATCTG +
Preference number: 5 (lower is better)
Translates to: LKRRYTTMRCLLIPARMACLQGS*DALHNL
Trigger: CAGATTATGCAGTGCATCCAATGAGCCCTGTAGGCA...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAACGTAGAGCTGCCACATaGTGTCATCTCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQRRAAT*CHLSWT
Trigger: GGTCCATGAGAGATGACACAATGTGGCAGCTCTACG...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCACATCTCCTCTCTGAATaGGTGAAGACACTTCCGATC +
Preference number: 5 (lower is better)
Translates to: SVLRIAGTVGVLAPSSQSHLLSE*VKTLPI
Trigger: GATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATG...TGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CAA 90 bp GTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAATCATTGTGTGTCTGCGGTCTATaGTCACATCTCCTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: VLRIAGTVGVLAPSSQSLCVCGL*SHLLSE
Trigger: TTCAGAGAGGAGATGTGACAATAGACCGCAGACACA...CAATGATTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CAA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATAAAAATCAGCCAGGCTaGGTGGCACAGGCGTGTGGT +
Preference number: 5 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNKNQPG*VAQACG
Trigger: ACCACACGCCTGTGCCACCAAGCCTGGCTGATTTTT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCAGCCAGGTGGTGCTCTaGGCCTCCTCGTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: TKTNNPIKKWANDANRHFSQVVL*ASSLMK
Trigger: CTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCT...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCTGTGTCTGCGGTCTATaGTCACATCTCCTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LKRRYTTMRCLLIPARMACVCGL*SHLLSE
Trigger: TTCAGAGAGGAGATGTGACAATAGACCGCAGACACA...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTCGGGTGTTGGTGATTTaGCTCTTGGAGGGACTACTC +
Preference number: 5 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIRVLVI*LLEGLL
Trigger: GAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCG...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCCTCCCTCAGGCACGCTaGTTGATGTCTTCTTATTCT +
Preference number: 5 (lower is better)
Translates to: LKRRYTTMRCLLIPARMALPQAR*LMSSYS
Trigger: AGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAG...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCTCTGGCGTTTTCCCTaGGAGGCTCTGGGGACTAAC +
Preference number: 5 (lower is better)
Translates to: TKTNNPIKKWANDANRHFLWRFP*EALGTN
Trigger: GTTAGTCCCCAGAGCCTCCAAGGGAAAACGCCAGAG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TCTTCTGTCTTAAGAATTGCTGGTACAGTTGGGGTCTTAGCGCCGAGTTCTCAAAAAGAATTTCATTCTTaGGGCTGTGGGCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: SSVLRIAGTVGVLAPSSQKEFHS*GCGPQA
Trigger: AGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTTT...TTGAGAACTCGGCGCTAAGACCCCAACTGTACCAGCAATTCTTAAGACAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538677.1
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCTTGAGCTCAGGAGCTaGAGATCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLELRS*RSAWAT
Trigger: TGTTGCCCAGGCTGATCTCAAGCTCCTGAGCTCAAG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS GCA 90 bp CCTTTCATTATGGTTTATATAGTATCTTGCACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGGCAAATCTGTGCTCTGCCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: PFIMVYIVSCTFKSI*FFPASRQICALPPV
Trigger: CACCGGCGGCAGAGCACAGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGTGCAAGATACTATATAAACCATAATGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000429027.7
ENST00000538714.5
ENST00000539256.5
CDS CCA 90 bp GCTATTGACCCGTGGGAAGGTGATGTGGGAATAGAGTGCATTGTCTaGTCAGAAATATTTACCATGGTTTTGGGACTACTCAAAGTACTG +
Preference number: 5 (lower is better)
Translates to: AIDPWEGDVGIECIV*SEIFTMVLGLLKVL
Trigger: CAGTACTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTCTTGGCCTCCTCGTaGATGAAGAAGACTCGGCCG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLLASS*MKKTRP
Trigger: CGGCCGAGTCTTCTTCATCAACGAGGAGGCCAAGAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299275.10
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGCCAGGTGGTGCTCTaGGCCTCCTCGTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSQVVL*ASSLMK
Trigger: CTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299275.10
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTCTGGCGTTTTCCCTaGGAGGCTCTGGGGACTAAC +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLWRFP*EALGTN
Trigger: GTTAGTCCCCAGAGCCTCCAAGGGAAAACGCCAGAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS GCA 90 bp GAAATCTATTCAGTTTATATAGTATCTTGCACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGGCAAATCTGTGCTCTGCCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: EIYSVYIVSCTFKSI*FFPASRQICALPPV
Trigger: CACCGGCGGCAGAGCACAGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGTGCAAGATACTATATAAACTGAATAGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS GCA 90 bp CCTTTCATTATGGTTTATATAGTATCTTGCACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGGCAAATCGCCTCCTGGCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PFIMVYIVSCTFKSI*FFPASRQIASWQSV
Trigger: CACAGACTGCCAGGAGGCGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGTGCAAGATACTATATAAACCATAATGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538034.5
CDS-3UTR CAA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCCTGTGACTGGATGTTaGCAGGTCACTTTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVPVTGC*QVTFLS
Trigger: TGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATTCGAAGATTCGGGTGTaGGTGATTTTGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNSKIRV*VILLLE
Trigger: CTCCAAGAGCAAAATCACCAACACCCGAATCTTCGA...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGACTACTCAGTTCGGCTaGCTGCCGTCTCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVTTQFG*LPSQLY
Trigger: ATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAGT...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS GCA 90 bp ACTTGGCATCAATATCTACTTCTTCAGGTCTGTATTTGTATAATGTaGCTCTACCTTCATCTTGTGACAGCGTTTTCCCTTGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: TWHQYLLLQVCICIM*LYLHLVTAFSLGGS
Trigger: AGAGCCTCCAAGGGAAAACGCTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000536974.5
ENST00000539256.5
CDS GCA 90 bp ACTTGGCATCAATATCTACTTCTTCAGGTCTGTATTTGTATAATGTaGCTCTACCTTCATCTTGTGACAGTTGCTGGTACAGTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TWHQYLLLQVCICIM*LYLHLVTVAGTVGV
Trigger: GACCCCAACTGTACCAGCAACTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424268.5
CDS-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCTATAAGGGCCCTGTATaGGGGCGATTTCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: TKTNNPIKKWANDANRHFYKGPV*GRFPPL
Trigger: TAGAGGTGGAAATCGCCCCAATACAGGGCCCTTATA...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTAGATACTTTCAGGCCTaGTCTTGCTGTTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIRYFQA*SCCFLG
Trigger: TCCCAAGAAACAGCAAGACAAGGCCTGAAAGTATCT...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACGTAGAGCTGCCACATaGTGTCATCTCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRRAAT*CHLSWT
Trigger: GGTCCATGAGAGATGACACAATGTGGCAGCTCTACG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCTGATAAGCAGCTATaGACCCGTGGGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPDKQL*TRGKVM
Trigger: CATCACCTTCCCACGGGTCAATAGCTGCTTATCAGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCGATCTGTAAGTTCGTaGAGGGGAGTATCCCTGATA +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVRSVSS*RGVSLI
Trigger: TATCAGGGATACTCCCCTCAACGAACTTACAGATCG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCATAATTCAACTTCTGCCACTGTaGTTAACTCTGGTTCACTCT +
Preference number: 5 (lower is better)
Translates to: RRYTTMRCLLIPARMAIIQLLPL*LTLVHS
Trigger: AGAGTGAACCAGAGTTAACAACAGTGGCAGAAGTTG...AATTATGGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTTGGTGATTTTGCTCTaGGAGGGACTACTCCAACAG +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLVILL*EGLLQQ
Trigger: CTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACGGGTGTTGGTGATTTaGCTCTTGGAGGGACTACTC +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRVLVI*LLEGLL
Trigger: GAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCTTCCACAGTCATCCTaGGTCGAGTACTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: TKTNNPIKKWANDANRHFLPQSS*VEYFQP
Trigger: TGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATCCTCAGGCACGCTTGTaGATGTCTTCTTATTCTTTC +
Preference number: 5 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNPQARL*MSSYSF
Trigger: GAAAGAATAAGAAGACATCAACAAGCGTGCCTGAGG...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CTCAAAAGAAGGTACACAACAATGAGATGCCTCCTTATTCCTGCAAGAATGGCCTTTCACTGCCATTGTTaGATTTCCTCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: LKRRYTTMRCLLIPARMAFHCHC*ISSRNL
Trigger: GAGGTTTCTAGAGGAAATCAAACAATGGCAGTGAAA...GGCCATTCTTGCAGGAATAAGGAGGCATCTCATTGTTGTGTACCTTCTTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TGTAGTCTGTGTCTGGCTCTTTTAGGCAGCATCAAGGTTTTAAAGTTCAGTCATCTCCCAGTCTGTGACTaGTCTTTTCATTCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CSLCLALLGSIKVLKFSHLPVCD*SFHSLQ
Trigger: CTGAAGAGAATGAAAAGACAAGTCACAGACTGGGAG...ATGACTGAACTTTAAAACCTTGATGCTGCCTAAAAGAGCCAGACACAGACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCTTGAATTCAGGAGTTaGAGACCAGCGTGGACAACT +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLEFRS*RPAWTT
Trigger: AGTTGTCCACGCTGGTCTCAAACTCCTGAATTCAAG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS TCA 90 bp GTTCATTCACTACAAAAATACAATTGTCCTGTGATGGTTGTCCTGTaGCTGGATGTTTGCAGGTCACTTTCCTTTCATTATGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: VHSLQKYNCPVMVVL*LDVCRSLSFHYGSL
Trigger: AAGGCTGCCATAATGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGGACAACCATCACAGGACAATTGTATTTTTGTAGTGAATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536974.5
CDS CCA 90 bp CTGTTCGTCAACACTGTTCTTTGTATTTTCTTCAGGATGCTCTTCTaGTTTATGATTTGCGGTCTGTGTTTCATCTTGAGGGCTGAATGT +
Preference number: 5 (lower is better)
Translates to: LFVNTVLCIFFRMLF*FMICGLCFILRAEC
Trigger: ACATTCAGCCCTCAAGATGAAACACAGACCGCAAATCATAAACCAGAAGAGCATCCTGAAGAAAATACAAAGAACAGTGTTGACGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGCCTACAGGGCTCATaGGATGCACTGCATAATCTG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCLQGS*DALHNL
Trigger: CAGATTATGCAGTGCATCCAATGAGCCCTGTAGGCA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATCTGCCAGGCTAACATaGACTATTTTGTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQSARLT*TILFSE
Trigger: TTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATATAAGGGCCCTGTATaGGGGCGATTTCCACCTCTA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKYKGPV*GRFPPL
Trigger: TAGAGGTGGAAATCGCCCCAATACAGGGCCCTTATA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTCTGGGCTCTGTGACTaGGCATATTTCTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVSGLCD*AYFLVM
Trigger: CATTACCAAGAAATATGCCAAGTCACAGAGCCCAGA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCTTTCAGGCCTTGTCTaGCTGTTTCTTGGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: TKTNNPIKKWANDANRHFLSGLV*LFLGSV
Trigger: AACACTCCCAAGAAACAGCAAGACAAGGCCTGAAAG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCATCTCCTCTCTGAATaGGTGAAGACACTTCCGATC +
Preference number: 5 (lower is better)
Translates to: TKTNNPIKKWANDANRHFHLLSE*VKTLPI
Trigger: GATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATCTTCAGGTCTGTATTaGTATAATGTGCCTCTACCT +
Preference number: 5 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQSSGLY*YNVPLP
Trigger: AGGTAGAGGCACATTATACAAATACAGACCTGAAGA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGTTTCTCCTTGTGGAGTaGCTGAAGTTTCTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVFLLVE*LKFLFQ
Trigger: CTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAA...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATTCTGTAGTACCTCTTaGCTGCTTATGTTTACTCAG +
Preference number: 5 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQFCSTS*LLMFTQ
Trigger: CTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGGTTCCACTGCACTTCTaGGTCTTTCCGTTCTTAGAT +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVVPLHF*VFPFLD
Trigger: ATCTAAGAACGGAAAGACCAAGAAGTGCAGTGGAAC...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTTCCACAGTCATCCTaGGTCGAGTACTTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLPQSS*VEYFQP
Trigger: TGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAACTACTCAGTTCGGCTaGCTGCCGTCTCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKTTQFG*LPSQLY
Trigger: ATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAGT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGAAAGAATTTCATTCTTaGGGCTGTGGGCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVKEFHS*GCGPQA
Trigger: AGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTTT...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTTCATCGTTTTCCCTaGGAGGCTCTGGGGACTAAC +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFHRFP*EALGTN
Trigger: GTTAGTCCCCAGAGCCTCCAAGGGAAAACGATGAAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424268.5
CDS-3UTR CAA 90 bp TTATTTGACAAATATGTGATTTGCCTGTACTTTCTCCCAGTCTGTGACTTGTCTCCCCCAGTGAATTCCTaGGGTACCTCTGTCAAAATT +
Preference number: 5 (lower is better)
Translates to: LFDKYVICLYFLPVCDLSPPVNS*GTSVKI
Trigger: AATTTTGACAGAGGTACCCAAGGAATTCACTGGGGG...AGACAAGTCACAGACTGGGAGAAAGTACAGGCAAATCACATATTTGTCAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR CAA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATAAAACAGAAGCCTCTTaGAGGTTCCAGGTAGACATA +
Preference number: 5 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNKTEAS*RFQVDI
Trigger: TATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCTGTGACTGGATGTTaGCAGGTCACTTTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPVTGC*QVTFLS
Trigger: TGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTTTCAGGCCTTGTCTaGCTGTTTCTTGGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLSGLV*LFLGSV
Trigger: AACACTCCCAAGAAACAGCAAGACAAGGCCTGAAAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACGATCTGTAAGTTCGTaGAGGGGAGTATCCCTGATA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRSVSS*RGVSLI
Trigger: TATCAGGGATACTCCCCTCAACGAACTTACAGATCG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACATCTCCTCTCTGAATaGGTGAAGACACTTCCGATC +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKHLLSE*VKTLPI
Trigger: GATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGTGTCTGCGGTCTATaGTCACATCTCCTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKCVCGL*SHLLSE
Trigger: TTCAGAGAGGAGATGTGACAATAGACCGCAGACACA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp TGCACATGCATGTTTATAGCAGCACAATTTGCAACTCCAAGGGTATGGAACCAATCTGGACCCTCATTTTaGTACTTAACTGTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: CTCMFIAAQFATPRVWNQSGPSF*YLTVEK
Trigger: TTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGA...TTGGTTCCATACCCTTGGAGTTGCAAATTGTGCTGCTATAAACATGCATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTGGTGATTTTGCTCTaGGAGGGACTACTCCAACAG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLVILL*EGLLQQ
Trigger: CTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCGAAGATTCGGGTGTaGGTGATTTTGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSKIRV*VILLLE
Trigger: CTCCAAGAGCAAAATCACCAACACCCGAATCTTCGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTCCCTCAGGCACGCTaGTTGATGTCTTCTTATTCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLPQAR*LMSSYS
Trigger: AGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp ATGTTCTCACTTATAAGTTGGAGCTACACTATGGGTATGCAAAGGCATACAGTGCGTCAACACTGTTCTTaGTATTTTCTTCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: MFSLISWSYTMGMQRHTVRQHCS*YFLQDA
Trigger: AGCATCCTGAAGAAAATACAAAGAACAGTGTTGACG...CACTGTATGCCTTTGCATACCCATAGTGTAGCTCCAACTTATAAGTGAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp TCTGTGTCTGGCTCTTTTAGGCAGCATCAAGGTTTTAAAGTTCAGTCATCGTATGTGCTCACTGGCTATTaGAGTATATTCTCATGTGAA +
Preference number: 5 (lower is better)
Translates to: SVSGSFRQHQGFKVQSSYVLTGY*SIFSCE
Trigger: TTCACATGAGAATATACTCAAATAGCCAGTGAGCAC...ATACGATGACTGAACTTTAAAACCTTGATGCTGCCTAAAAGAGCCAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR CAA 90 bp CAGATACCAACTGACAAAAACAGAAGCCTCTTTGAGGTTCCAGGTAGACATAATATTAGCACTCTATGGTaGGGAATGTTATTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: QIPTDKNRSLFEVPGRHNISTLW*GMLLVS
Trigger: AGAAACCAATAACATTCCCAACCATAGAGTGCTAAT...ATTATGTCTACCTGGAACCTCAAAGAGGCTTCTGTTTTTGTCAGTTGGTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTGGGCTCTGTGACTaGGCATATTTCTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSGLCD*AYFLVM
Trigger: CATTACCAAGAAATATGCCAAGTCACAGAGCCCAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGATACTTTCAGGCCTaGTCTTGCTGTTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRYFQA*SCCFLG
Trigger: TCCCAAGAAACAGCAAGACAAGGCCTGAAAGTATCT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTTCTCCTTGTGGAGTaGCTGAAGTTTCTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFLLVE*LKFLFQ
Trigger: CTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACAACTTCTGCCACTGTaGTTAACTCTGGTTCACTCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKQLLPL*LTLVHS
Trigger: AGAGTGAACCAGAGTTAACAACAGTGGCAGAAGTTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAGTTCCACTGCACTTCTaGGTCTTTCCGTTCTTAGAT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKVPLHF*VFPFLD
Trigger: ATCTAAGAACGGAAAGACCAAGAAGTGCAGTGGAAC...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACCTCAGGCACGCTTGTaGATGTCTTCTTATTCTTTC +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKPQARL*MSSYSF
Trigger: GAAAGAATAAGAAGACATCAACAAGCGTGCCTGAGG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCAGAATTTACTCCATTaGGCTCAGGTTCAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVQNLLH*AQVQKA
Trigger: TGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGCTTCTGGTTTATGATTaGCGGTCTGTGTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVLLVYD*RSVFHL
Trigger: AAGATGAAACACAGACCGCAAATCATAAACCAGAAG...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAAAGAATTTCATTCTTaGGGCTGTGGGCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKKEFHS*GCGPQA
Trigger: AGCTTGAGGCCCACAGCCCAAAGAATGAAATTCTTT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429027.7
CDS-3UTR CAA 90 bp TCTGTGTCTGGCTCTTTTAGGCAGCATCAAGGTTTTAAAGTTCAGTCATCGTATAGTGAATTTACAGAGTaGTGCAACTATTACCACATC +
Preference number: 5 (lower is better)
Translates to: SVSGSFRQHQGFKVQSSYSEFTE*CNYYHI
Trigger: GATGTGGTAATAGTTGCACAACTCTGTAAATTCACT...ATACGATGACTGAACTTTAAAACCTTGATGCTGCCTAAAAGAGCCAGACACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR CAA 90 bp CAACTTAGTAAGACTGTCTCTATAAGAAAATCGAAATATCAGCCGAGTGTGGTGGTTCTCACTTATAAGTaGGAGCTACACTATGGGTAT +
Preference number: 5 (lower is better)
Translates to: QLSKTVSIRKSKYQPSVVVLTYK*ELHYGY
Trigger: ATACCCATAGTGTAGCTCCAACTTATAAGTGAGAAC...CACCACACTCGGCTGATATTTCGATTTTCTTATAGAGACAGTCTTACTAAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS GCA 90 bp ACTTGGCATCAATATCTACTTCTTCAGGTCTGTATTTGTATAATGTaGCTCTACCTTCATCTTGTGACAGCTGATGATCCAAATATATGG +
Preference number: 5 (lower is better)
Translates to: TWHQYLLLQVCICIM*LYLHLVTADDPNIW
Trigger: CCATATATTTGGATCATCAGCTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTACATAGGAAGCTATaGTCGAAGATTCGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLHRKL*SKIRVL
Trigger: CAACACCCGAATCTTCGACAATAGCTTCCTATGTAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS TCA 90 bp GTTCATTCACTACAAAAATACAATTGTCCTGTGATGGTTGTCCTGTaGCTGGATGTTTGCAGGTCACTTTCCTTTCATTATGGTTTATAT +
Preference number: 5 (lower is better)
Translates to: VHSLQKYNCPVMVVL*LDVCRSLSFHYGLY
Trigger: ATATAAACCATAATGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGGACAACCATCACAGGACAATTGTATTTTTGTAGTGAATGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299275.10
ENST00000429027.7
ENST00000538034.5
ENST00000538714.5
ENST00000539256.5
CDS GCA 90 bp TTCCAGGGTAAGGTTCTGAATAAGATATTAAAGGGCAAGAAGTTCTaGTATGAACAATCCTTTATGGTCTATTATTCCCCAAACGTACTT +
Preference number: 5 (lower is better)
Translates to: FQGKVLNKILKGKKF*YEQSFMVYYSPNVL
Trigger: AAGTACGTTTGGGGAATAATAGACCATAAAGGATTGTTCATAGCAGAACTTCTTGCCCTTTAATATCTTATTCAGAACCTTACCCTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535357.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATGGTTGGGAATGTTATaGGTTTCTTTAGTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKWLGML*VSLVGA
Trigger: TGCACCAACTAAAGAAACCAATAACATTCCCAACCA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTGCCAGGCTAACATaGACTATTTTGTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSARLT*TILFSE
Trigger: TTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTTCAGGTCTGTATTaGTATAATGTGCCTCTACCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSSGLY*YNVPLP
Trigger: AGGTAGAGGCACATTATACAAATACAGACCTGAAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp ACAAAAACAAATAATCCCATCAAAAAGTGGGCAAATGACGCGAATAGGCATTTCCATAATCGGCTTAACTaGGCATCAATATCTACTTCT +
Preference number: 5 (lower is better)
Translates to: TKTNNPIKKWANDANRHFHNRLN*ASISTS
Trigger: AGAAGTAGATATTGATGCCAAGTTAAGCCGATTATG...GAAATGCCTATTCGCGTCATTTGCCCACTTTTTGATGGGATTATTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538714.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTCTGTAGTACCTCTTaGCTGCTTATGTTTACTCAG +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFCSTS*LLMFTQ
Trigger: CTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTTATTCTTTCCATTaGCTCTTCCACAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSYSFH*LFHSHP
Trigger: AGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACAGAATTTACTCCATTaGGCTCAGGTTCAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKQNLLH*AQVQKA
Trigger: TGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACTTCTGGTTTATGATTaGCGGTCTGTGTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKLLVYD*RSVFHL
Trigger: AAGATGAAACACAGACCGCAAATCATAAACCAGAAG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACGTCAACACTGTTCTTaGTATTTTCTTCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKRQHCS*YFLQDA
Trigger: AGCATCCTGAAGAAAATACAAAGAACAGTGTTGACG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATTTCACTGCCATTGTTaGATTTCCTCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKFHCHC*ISSRNL
Trigger: GAGGTTTCTAGAGGAAATCAAACAATGGCAGTGAAA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538972.1
CDS-3UTR CAA 90 bp TGTGTGCACACGTTTTCATTCTTAACATACTTACGTAGTAAAATTGCTTGGTCAATTCCTTCCTTGGTTTaGGAAAGCAGAAATAGCAAG +
Preference number: 5 (lower is better)
Translates to: CVHTFSFLTYLRSKIAWSIPSLV*ESRNSK
Trigger: CTTGCTATTTCTGCTTTCCAAAACCAAGGAAGGAAT...TGACCAAGCAATTTTACTACGTAAGTATGTTAAGAATGAAAACGTGTGCACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAATTAGCACTCTATGGTaGGGAATGTTATTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKISTLW*GMLLVS
Trigger: AGAAACCAATAACATTCCCAACCATAGAGTGCTAAT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAACATAATCGGCTTAACTaGGCATCAATATCTACTTCT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKHNRLN*ASISTS
Trigger: AGAAGTAGATATTGATGCCAAGTTAAGCCGATTATG...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAATCTGGACCCTCATTTTaGTACTTAACTGTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSGPSF*YLTVEK
Trigger: TTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGA...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299275.10
CDS-3UTR CAA 90 bp AACCTTGAGATTACGAAGTGTACATATGGGCCATTAAAGCTGTTTTGGAATAAAAGTGAGATCCATTTCTaGGATATCCTTGAACTTGAT +
Preference number: 5 (lower is better)
Translates to: NLEITKCTYGPLKLFWNKSEIHF*DILELD
Trigger: ATCAAGTTCAAGGATATCCAAGAAATGGATCTCACT...TTTATTCCAAAACAGCTTTAATGGCCCATATGTACACTTCGTAATCTCAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424268.5
ENST00000429027.7
CDS-3UTR CAA 90 bp CATTTGTTATGGAGAATAGGAAAGCTACTGGATAACGAAGACAATCAGTTTAGAGTCAAAATTCCTTCCTaGGTTTTGGAAAGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: HLLWRIGKLLDNEDNQFRVKIPS*VLESRN
Trigger: ATTTCTGCTTTCCAAAACCAAGGAAGGAATTTTGAC...TCTAAACTGATTGTCTTCGTTATCCAGTAGCTTTCCTATTCTCCATAACAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540972.5
CDS GCA 72 bp GCAACTGAGGCTGCGAACGCCTCCTCCGGCTCCGGCTaGTCCTCCCGTGGCAGGAGGGAACGCGCCAAGCGT +
Preference number: 6 (lower is better)
Translates to: ATEAANASSGSG*SSRGRRERAKR
Trigger: ACGCTTGGCGCGTTCCCTCCTGCCACGGGAGGAGCAGCCGGAGCCGGAGGAGGCGTTCGCAGCCTCAGTTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538034.5
CDS GCA 72 bp CGGTGTCCGGTGACCACCGCCTCGCCGGTGACGGGGTaGAGCCAGGTGGTGCTCTTGGCCTCCTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: RCPVTTASPVTG*SQVVLLASSLM
Trigger: CATCAACGAGGAGGCCAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGAGGCGGTGGTCACCGGACACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299275.10
ENST00000429027.7
ENST00000538714.5
ENST00000539256.5
ENST00000540972.5
CDS GCA 72 bp TCCCAGCCAGTAGGCAAATCGCCTCCTGGCAGTCTGTaGAACCTCCGTGCGGCTGGCGGGGACTTTAGATCC +
Preference number: 6 (lower is better)
Translates to: SQPVGKSPPGSL*NLRAAGGDFRS
Trigger: GGATCTAAAGTCCCCGCCAGCCGCACGGAGGTTGCACAGACTGCCAGGAGGCGATTTGCCTACTGGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538034.5
CDS GCA 72 bp TTCTGTGAGCTGCGGCTGAGTGGATGGAACTGGCGATaGCGAGGACTCAGGAGATGGGGACAGACTTTTCAC +
Preference number: 6 (lower is better)
Translates to: FCELRLSGWNWR*RGLRRWGQTFH
Trigger: GTGAAAAGTCTGTCCCCATCTCCTGAGTCCTCGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS CCA 72 bp AGCGTAAGCTCCTCTGGCGTTTTCCCTTGGAGGCTCTaGGGACTAACAGACTGTAAAGTCAGGCCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: SVSSSGVFPWRL*GLTDCKVRPAG
Trigger: GCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCCAGAGGAGCTTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429027.7
ENST00000538677.1
ENST00000538714.5
CDS TCA 72 bp CCTCCTCAGCCTCCCAAAGCTCTGGGATTACTGGCCTaGGCCACCATGTGGGGCCCCTTTCTCTATTTCTTT +
Preference number: 6 (lower is better)
Translates to: PPQPPKALGLLA*ATMWGPFLYFF
Trigger: AAAGAAATAGAGAAAGGGGCCCCACATGGTGGCTCAGGCCAGTAATCCCAGAGCTTTGGGAGGCTGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510738.2
CDS TCA 72 bp ACACACATGAAATGTGATCCTTCTGTGAGCTGCGGCTaGGTGGATGGAACTGGCGATGCCGAGGACTCAGGA +
Preference number: 6 (lower is better)
Translates to: THMKCDPSVSCG*VDGTGDAEDSG
Trigger: TCCTGAGTCCTCGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS CCA 72 bp CCTTCATCTTGTGACAGCGTTTTCCCTTGGAGGCTCTaGGGACTAACAGACTGTAAAGTCAGGCCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: PSSCDSVFPWRL*GLTDCKVRPAG
Trigger: GCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCTGTCACAAGATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299275.10
ENST00000536974.5
ENST00000539256.5
CDS CCA 72 bp GGGAGGCTGCTCTGTAAAGTCATAGGACCGAGGAAGTaGAGGACGAGGTGGGACTACTTCCTCTTCCTCATT +
Preference number: 6 (lower is better)
Translates to: GRLLCKVIGPRK*RTRWDYFLFLI
Trigger: AATGAGGAAGAGGAAGTAGTCCCACCTCGTCCTCCACTTCCTCGGTCCTATGACTTTACAGAGCAGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS TCA 72 bp CGTTTCTCCTCCGCTCCGGGTCCTAATGTCTTGTCATaGGTGGAAGGGGTTACACTGCAGATACTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: RFSSAPGPNVLS*VEGVTLQILSG
Trigger: GCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS GCA 72 bp AACGTATGCTCCCGGATACTACTCAGTTCGGCTTGCTaGCGTCTCAGCTTTATTAGCAGCAGCGTAAGCTCC +
Preference number: 6 (lower is better)
Translates to: NVCSRILLSSAC*RLSFISSSVSS
Trigger: GGAGCTTACGCTGCTGCTAATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAGTATCCGGGAGCATACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429027.7
ENST00000538677.1
ENST00000538714.5
CDS CCA 72 bp TCTCCTCCGCTCCGGGTCCTAATGTCTTGTCATGAGTaGAAGGGGTTACACTGCAGATACTTTCAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SPPLRVLMSCHE*KGLHCRYFQAL
Trigger: CAAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CAA 72 bp ATGACTCGATCGGCCTCTGTGTATAAGGGCCCTGTATaGGGGCGATTTCCACCTCTAAGATCTGCCAGGCTA +
Preference number: 6 (lower is better)
Translates to: MTRSASVYKGPV*GRFPPLRSARL
Trigger: TAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS TCA 72 bp CATTCTTTGGGCTGTGGGCCTCAAGCTTTAGCTGCATaGGCTGTGCTAACGTATGCTCCCGGATACTACTCA +
Preference number: 6 (lower is better)
Translates to: HSLGCGPQALAA*AVLTYAPGYYS
Trigger: TGAGTAGTATCCGGGAGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGCCCACAGCCCAAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429027.7
ENST00000538677.1
ENST00000538714.5
CDS CCA 72 bp AGTGGATGGAACTGGCGATGCCGAGGACTCAGGAGATaGGGACAGACTTTTCACTGCCATTGTTTGATTTCC +
Preference number: 6 (lower is better)
Translates to: SGWNWRCRGLRR*GQTFHCHCLIS
Trigger: GGAAATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCTCGGCATCGCCAGTTCCATCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS CAA 90 bp GTTCTCTGTATGACTCGATCGGCCTCTGTGTATAAGGGCCCTGTATaGGGGCGATTTCCACCTCTAAGATCTGCCAGGCTAACATTGACT +
Preference number: 6 (lower is better)
Translates to: VLCMTRSASVYKGPV*GRFPPLRSARLTLT
Trigger: AGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CAA 90 bp GATGGGCCCTGTGTCTGCGGTCTATTGTCACATCTCCTCTCTGAATaGGTGAAGACACTTCCGATCTGTAAGTTCGTTGAGGGGAGTATC +
Preference number: 6 (lower is better)
Translates to: DGPCVCGLLSHLLSE*VKTLPICKFVEGSI
Trigger: GATACTCCCCTCAACGAACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538677.1
ENST00000538714.5
ENST00000539256.5
CDS TCA 72 bp GATTGGTCTGTAGTGCACAGTCTGAGCAGGGCATGCTaGCCCACTCTCATATTCAGATGGCAGAGAATTCAG +
Preference number: 6 (lower is better)
Translates to: DWSVVHSLSRAC*PTLIFRWQRIQ
Trigger: CTGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS GCA 72 bp ATTTCATTCTTTGGGCTGTGGGCCTCAAGCTTTAGCTaGATGAGCTGTGCTAACGTATGCTCCCGGATACTA +
Preference number: 6 (lower is better)
Translates to: ISFFGLWASSFS*MSCANVCSRIL
Trigger: TAGTATCCGGGAGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGCCCACAGCCCAAAGAATGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429027.7
ENST00000538677.1
ENST00000538714.5
CDS CAA 72 bp AGGAAGCTATTGTCGAAGATTCGGGTGTTGGTGATTTaGCTCTTGGAGGGACTACTCCAACAGGAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: RKLLSKIRVLVI*LLEGLLQQESG
Trigger: CCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS TCA 72 bp TCTGCGGTCTATTGTCACATCTCCTCTCTGAATTGGTaGAGACACTTCCGATCTGTAAGTTCGTTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: SAVYCHISSLNW*RHFRSVSSLRG
Trigger: TCCCCTCAACGAACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538677.1
ENST00000538714.5
ENST00000539256.5
CDS TCA 72 bp AGAAGTCATACTCCAAGTAGGAGTGCCTCCAAGGCTTaGGCTGCTTTCCTTTTCAGATCCCAACCTTTCAAC +
Preference number: 6 (lower is better)
Translates to: RSHTPSRSASKA*AAFLFRSQPFN
Trigger: GTTGAAAGGTTGGGATCTGAAAAGGAAAGCAGCTCAAGCCTTGGAGGCACTCCTACTTGGAGTATGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534979.1
CDS CAA 72 bp CTATTGTCGAAGATTCGGGTGTTGGTGATTTTGCTCTaGGAGGGACTACTCCAACAGGAAAGTGGGAACCTT +
Preference number: 6 (lower is better)
Translates to: LLSKIRVLVILL*EGLLQQESGNL
Trigger: AAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CAA 72 bp CTATTGTCGAAGATTCGGGTGTTGGTGATTTTGCTCTaGGAGGGACTACTCCAACAGGAAAGTGGGAACCTA +
Preference number: 6 (lower is better)
Translates to: LLSKIRVLVILL*EGLLQQESGNL
Trigger: TAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538972.1
CDS CAA 90 bp GTGGGAATAGAGTGCATTGTCTGGTCAGAAATATTTACCATGGTTTaGGGACTACTCAAAGTACTGTGTCGAGGGAGGGTGCTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: VGIECIVWSEIFTMV*GLLKVLCRGRVLCL
Trigger: CAAACAGAGCACCCTCCCTCGACACAGTACTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATTCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CAA 90 bp CTTCTCCCTCAGGCACGCTTGTTGATGTCTTCTTATTCTTTCCATTaGCTCTTCCACAGTCATCCTTGGTCGAGTACTTTCAGCCAAACA +
Preference number: 6 (lower is better)
Translates to: LLPQARLLMSSYSFH*LFHSHPWSSTFSQT
Trigger: TGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS TCA 72 bp ACTGTTCCAACTGCTGCATTGAATTTGTTCTCTGTATaGCTCGATCGGCCTCTGTGTATAAGGGCCCTGTAT +
Preference number: 6 (lower is better)
Translates to: TVPTAALNLFSV*LDRPLCIRALY
Trigger: ATACAGGGCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS TCA 72 bp GCTTGCTCAAGCGTGTATTTCTCCTTGTGGAGTTGCTaGAGTTTCTCTTCCAGAGCATGCACCACTTTATCT +
Preference number: 6 (lower is better)
Translates to: ACSSVYFSLWSC*SFSSRACTTLS
Trigger: AGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACGCTTGAGCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538068.1
ENST00000538714.5
ENST00000539256.5
CDS GCA 72 bp CTCCCCTTCTGGATTTTAATCCACTGTTCCAACTGCTaGATTGAATTTGTTCTCTGTATGACTCGATCGGCC +
Preference number: 6 (lower is better)
Translates to: LPFWILIHCSNC*IEFVLCMTRSA
Trigger: GGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTAAAATCCAGAAGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS GCA 72 bp TTTTGGGACTACTCAAAGTACTGTGTCGAGGGAGGGTaGTCTGTTTGTTATAAAACTGACGCTGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: FWDYSKYCVEGG*SVCYKTDAAAI
Trigger: AATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACCCTCCCTCGACACAGTACTTTGAGTAGTCCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CCA 72 bp CTGCTGGGTTATCTGCATGCATTTCTATCTCTTGGCTaGCTGATAGCAAAGCTTGCTCAAGCGTGTATTTCT +
Preference number: 6 (lower is better)
Translates to: LLGYLHAFLSLG*LIAKLAQACIS
Trigger: AGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538068.1
ENST00000538714.5
ENST00000539256.5
CDS CCA 72 bp AACTTGATACATCTTCTTTTCTTCAGGCAGATGAACTaGGCCCCTGCTATAACAGAGCAAGGAGCTGCTATC +
Preference number: 6 (lower is better)
Translates to: NLIHLLFFRQMN*APAITEQGAAI
Trigger: GATAGCAGCTCCTTGCTCTGTTATAGCAGGGGCCCAGTTCATCTGCCTGAAGAAAAGAAGATGTATCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS CAA 72 bp TGTGTCTGCGGTCTATTGTCACATCTCCTCTCTGAATaGGTGAAGACACTTCCGATCTGTAAGTTCGTTGAG +
Preference number: 6 (lower is better)
Translates to: CVCGLLSHLLSE*VKTLPICKFVE
Trigger: CTCAACGAACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538677.1
ENST00000538714.5
ENST00000539256.5
CDS CAA 90 bp AGGTTACATAGGAAGCTATTGTCGAAGATTCGGGTGTTGGTGATTTaGCTCTTGGAGGGACTACTCCAACAGGAAAGTGGGAACCTATTT +
Preference number: 6 (lower is better)
Translates to: RLHRKLLSKIRVLVI*LLEGLLQQESGNLF
Trigger: AAATAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538972.1
CDS TCA 72 bp TACATAGGAAGCTATTGTCGAAGATTCGGGTGTTGGTaGTTTTGCTCTTGGAGGGACTACTCCAACAGGAAA +
Preference number: 6 (lower is better)
Translates to: YIGSYCRRFGCW*FCSWRDYSNRK
Trigger: TTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAGCTTCCTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS GCA 72 bp GCTATTGACCCGTGGGAAGGTGATGTGGGAATAGAGTaGATTGTCTGGTCAGAAATATTTACCATGGTTTTG +
Preference number: 6 (lower is better)
Translates to: AIDPWEGDVGIE*IVWSEIFTMVL
Trigger: CAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS GCA 72 bp ACAGGAAAGTGGGAACCTATTTCTGTAGTACCTCTTTaGTGCTTATGTTTACTCAGCCCTTCCATGACATCC +
Preference number: 6 (lower is better)
Translates to: TGKWEPISVVPL*CLCLLSPSMTS
Trigger: GGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAGGTTCCCACTTTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538972.1
CDS CCA 72 bp TCACAGGTTCTGTCTGTACTAGGGCAGCATCTAACATaGCTTTCATCCACAACTCCATTTCCTTTCCTGTAT +
Preference number: 6 (lower is better)
Translates to: SQVLSVLGQHLT*LSSTTPFPFLY
Trigger: ATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGACAGAACCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS CAA 90 bp ATAATCTGGACCACAGTGAGATCCATTTCTTGGATATCCTTGAACTaGATACATCTTCTTTTCTTCAGGCAGATGAACTGGGCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: IIWTTVRSISWISLN*IHLLFFRQMNWAPA
Trigger: AGCAGGGGCCCAGTTCATCTGCCTGAAGAAAAGAAGATGTATCAAGTTCAAGGATATCCAAGAAATGGATCTCACTGTGGTCCAGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS GCA 72 bp ATGGTTTATATAGTATCTTGCACCTTCAAAAGTATATaGTTCTTCCCAGCCAGTAGGCAAATCGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: MVYIVSCTFKSI*FFPASRQIASW
Trigger: CCAGGAGGCGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGTGCAAGATACTATATAAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538034.5
CDS CAA 72 bp TTTTTGAAGCTCGTGAAGTTCTGCCTACAGGGCTCATaGGATGCACTGCATAATCTGAAGTCACGTTATAGT +
Preference number: 6 (lower is better)
Translates to: FLKLVKFCLQGS*DALHNLKSRYS
Trigger: ACTATAACGTGACTTCAGATTATGCAGTGCATCCAATGAGCCCTGTAGGCAGAACTTCACGAGCTTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538305.5
ENST00000538714.5
ENST00000539256.5
CDS CAA 72 bp AACAGGAAAGTGGGAACCTATTTCTGTAGTACCTCTTaGCTGCTTATGTTTACTCAGCCCTTCCATGACATC +
Preference number: 6 (lower is better)
Translates to: NRKVGTYFCSTS*LLMFTQPFHDI
Trigger: GATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAGGTTCCCACTTTCCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538972.1
CDS CAA 90 bp GAGTCTATAATCTGGACCACAGTGAGATCCATTTCTTGGATATCCTaGAACTTGATACATCTTCTTTTCTTCAGGCAGATGAACTGGGCC +
Preference number: 6 (lower is better)
Translates to: ESIIWTTVRSISWIS*NLIHLLFFRQMNWA
Trigger: GGCCCAGTTCATCTGCCTGAAGAAAAGAAGATGTATCAAGTTCAAGGATATCCAAGAAATGGATCTCACTGTGGTCCAGATTATAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS TCA 72 bp TACCTCTTTGCTGCTTATGTTTACTCAGCCCTTCCATaGCATCCTGAATTCGCCAAAGTTCTTTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: YLFAAYVYSALP*HPEFAKVLSES
Trigger: AGATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538714.5
ENST00000538972.1
ENST00000539256.5
CDS TCA 72 bp TCTGCCTACAGGGCTCATTGGATGCACTGCATAATCTaGAGTCACGTTATAGTTAGAAGCTTCATTTATCAT +
Preference number: 6 (lower is better)
Translates to: SAYRAHWMHCII*SHVIVRSFIYH
Trigger: ATGATAAATGAAGCTTCTAACTATAACGTGACTTCAGATTATGCAGTGCATCCAATGAGCCCTGTAGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538034.5
ENST00000538305.5
ENST00000538714.5
ENST00000539256.5
CDS TCA 72 bp CACGTAATGGCCTTGACAATCCTCACAGAGCCCATTTaGGGTAGGTGTTATTATTTGCAGTTTATGAATACA +
Preference number: 6 (lower is better)
Translates to: HVMALTILTEPI*GRCYYLQFMNT
Trigger: TGTATTCATAAACTGCAAATAATAACACCTACCTCAAATGGGCTCTGTGAGGATTGTCAAGGCCATTACGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534979.1
CDS GCA 72 bp TTTGATCCTATCATACCTATTTCTGTAGTACCTCTTTaGTGCTTATGTTTACTCAGCCCTTCCATGACATCC +
Preference number: 6 (lower is better)
Translates to: FDPIIPISVVPL*CLCLLSPSMTS
Trigger: GGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAGGTATGATAGGATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5
CDS TCA 72 bp CTACAAAAATACAATTGTCCTGTGATGGTTGTCCTGTaGCTGGATGTTTGCAGGTCACTTTCCTTTCATTAT +
Preference number: 6 (lower is better)
Translates to: LQKYNCPVMVVL*LDVCRSLSFHY
Trigger: ATAATGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGGACAACCATCACAGGACAATTGTATTTTTGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
ENST00000538034.5
ENST00000538305.5
ENST00000538714.5
ENST00000539256.5
CDS CCA 72 bp GAGTCTATAATCTGGACCACAGTGAGATCCATTTCTTaGATATCCTTGAACTTGATACATCTTCTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: ESIIWTTVRSIS*ISLNLIHLLFF
Trigger: GAAGAAAAGAAGATGTATCAAGTTCAAGGATATCCAAGAAATGGATCTCACTGTGGTCCAGATTATAGACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS TCA 72 bp AGCCCATTTGAGGTAGGTGTTATTATTTGCAGTTTATaGATACATAAACCGAGGCTCATAGCATTTAGAAAG +
Preference number: 6 (lower is better)
Translates to: SPFEVGVIICSL*IHKPRLIAFRK
Trigger: CTTTCTAAATGCTATGAGCCTCGGTTTATGTATTCATAAACTGCAAATAATAACACCTACCTCAAATGGGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534979.1
CDS CAA 72 bp AGAGTCTATAATCTGGACCACAGTGAGATCCATTTCTaGGATATCCTTGAACTTGATACATCTTCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: RVYNLDHSEIHF*DILELDTSSFL
Trigger: AAGAAAAGAAGATGTATCAAGTTCAAGGATATCCAAGAAATGGATCTCACTGTGGTCCAGATTATAGACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424268.5
ENST00000429027.7
ENST00000536974.5
CDS CAA 72 bp ATACTTACATCAATATCTACTTCTTCAGGTCTGTATTaGTATAATGTGCCTCTACCTTCATCTTGTGACAGC +
Preference number: 6 (lower is better)
Translates to: ILTSISTSSGLY*YNVPLPSSCDS
Trigger: GCTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGTAAGTAT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537027.1
CDS GCA 72 bp AAGGTTCTGAATAAGATATTAAAGGGCAAGAAGTTCTaGTATGAACAATCCTTTATGGTCTATTATTCCCCA +
Preference number: 6 (lower is better)
Translates to: KVLNKILKGKKF*YEQSFMVYYSP
Trigger: TGGGGAATAATAGACCATAAAGGATTGTTCATAGCAGAACTTCTTGCCCTTTAATATCTTATTCAGAACCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535357.5
CDS CAA 72 bp TTGTTTTGGATCTCTGGTTTAATTAGCACTCTATGGTaGGGAATGTTATTGGTTTCTTTAGTTGGTGCATTT +
Preference number: 6 (lower is better)
Translates to: LFWISGLISTLW*GMLLVSLVGAF
Trigger: AAATGCACCAACTAAAGAAACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGATCCAAAACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299275.10
ENST00000424268.5
ENST00000429027.7
ENST00000510738.2
ENST00000536974.5
ENST00000538714.5
ENST00000539256.5