RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000116095

Ensembl transcript IDs: ENST00000234453.10, ENST00000461474.1

Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGCTCCTTCTTTAGTACCAGATGCATCATAAAAATGTGCCACTaGGGCCAGGATCCTGACACTGGGAGGCCAAGGCAGGCAGATCAC +
Preference number: 1 (lower is better)
Translates to: ASSFFSTRCIIKMCH*GQDPDTGRPRQADH
Trigger: GTGATCTGCCTGCCTTGGCCTCCCAGTGTCAGGATCCTGGCCCCAGTGGCACATTTTTATGATGCATCTGGTACTAAAGAAGGAGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 90 bp GGTATAGGGCTGAAATCAGGACTAGAAGTCTGTATAAAGAGCAACTaGAACCCAGGTCCTCTCCCCTACTCTCCACAGCCAGCCTACGCC +
Preference number: 1 (lower is better)
Translates to: GIGLKSGLEVCIKSN*NPGPLPYSPQPAYA
Trigger: GGCGTAGGCTGGCTGTGGAGAGTAGGGGAGAGGACCTGGGTTCCAGTTGCTCTTTATACAGACTTCTAGTCCTGATTTCAGCCCTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 90 bp CATAAAGCCAGCTCCTTCTTTAGTACCAGATGCATCATAAAAATGTaGCACTGGGGCCAGGATCCTGACACTGGGAGGCCAAGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: HKASSFFSTRCIIKM*HWGQDPDTGRPRQA
Trigger: TGCCTGCCTTGGCCTCCCAGTGTCAGGATCCTGGCCCCAGTGGCACATTTTTATGATGCATCTGGTACTAAAGAAGGAGCTGGCTTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 90 bp TACCCGCCAGGGTTATTAAAAGACAGACCTCCTCAAAGGAACTCCTaGAGCCTAATCTGGCTTTCTTTCAGGCCAGGACACTCCCTCTGT +
Preference number: 1 (lower is better)
Translates to: YPPGLLKDRPPQRNS*SLIWLSFRPGHSLC
Trigger: ACAGAGGGAGTGTCCTGGCCTGAAAGAAAGCCAGATTAGGCTGCAGGAGTTCCTTTGAGGAGGTCTGTCTTTTAATAACCCTGGCGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 90 bp GCCTGTAATCCGAGAATTTTGGAAAGTCAAGGCAGGCAGATCCCTTaGGCCCAGGAGTTTGAGATCAGTCTGAACAGCATGGCAAAACCC +
Preference number: 1 (lower is better)
Translates to: ACNPRILESQGRQIP*AQEFEISLNSMAKP
Trigger: GGGTTTTGCCATGCTGTTCAGACTGATCTCAAACTCCTGGGCTCAAGGGATCTGCCTGCCTTGACTTTCCAAAATTCTCGGATTACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 90 bp TCCCTCCTTCGAGTATGCGGCTCTGTAGCCGTAGAAAGAGTAGTATaGTTACCTACTCCCACTTCCCCTCTAGAAGAGAATCTCATTATC +
Preference number: 1 (lower is better)
Translates to: SLLRVCGSVAVERVV*LPTPTSPLEENLII
Trigger: GATAATGAGATTCTCTTCTAGAGGGGAAGTGGGAGTAGGTAACCATACTACTCTTTCTACGGCTACAGAGCCGCATACTCGAAGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 90 bp TACTCAAGTAAAGGTCATAAAGCCAGCTCCTTCTTTAGTACCAGATaGATCATAAAAATGTGCCACTGGGGCCAGGATCCTGACACTGGG +
Preference number: 1 (lower is better)
Translates to: YSSKGHKASSFFSTR*IIKMCHWGQDPDTG
Trigger: CCCAGTGTCAGGATCCTGGCCCCAGTGGCACATTTTTATGATGCATCTGGTACTAAAGAAGGAGCTGGCTTTATGACCTTTACTTGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 90 bp GTTAGAATATACCCATTGCCCTATATTCTCGATGATAGTTACCCCTaGCACCATTCCCCACACCCTCTTAGTAAGCCCATGCAGACATCA +
Preference number: 1 (lower is better)
Translates to: VRIYPLPYILDDSYP*HHSPHPLSKPMQTS
Trigger: TGATGTCTGCATGGGCTTACTAAGAGGGTGTGGGGAATGGTGGCAGGGGTAACTATCATCGAGAATATAGGGCAATGGGTATATTCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 90 bp AAGTCCAGAGTGCTGGGAGAAAAAGATGGCAGCACTGAGCGGGACTaGAAAGTTTTCCTAGAACATCTCCTTTCATTACATGACTCACCA +
Preference number: 1 (lower is better)
Translates to: KSRVLGEKDGSTERD*KVFLEHLLSLHDSP
Trigger: TGGTGAGTCATGTAATGAAAGGAGATGTTCTAGGAAAACTTTTCAGTCCCGCTCAGTGCTGCCATCTTTTTCTCCCAGCACTCTGGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 90 bp ACACACACACACACACACACACACACACACACACACACCCAGAACTaGAGCAGACAAATCTCTAAATTGAAAGATTCCACCAAGTCAAGT +
Preference number: 1 (lower is better)
Translates to: THTHTHTHTHTHTQN*SRQISKLKDSTKSS
Trigger: ACTTGACTTGGTGGAATCTTTCAATTTAGAGATTTGTCTGCTTCAGTTCTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 90 bp AACCATAGAACAGGCCTGGAGGGCAACAGTACAAATGGCAGAAGATaGAGGACTGTGGAAGAAATGTCCCTAAAGGATGACAAAATATTT +
Preference number: 1 (lower is better)
Translates to: NHRTGLEGNSTNGRR*RTVEEMSLKDDKIF
Trigger: AAATATTTTGTCATCCTTTAGGGACATTTCTTCCACAGTCCTTCATCTTCTGCCATTTGTACTGTTGCCCTCCAGGCCTGTTCTATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 90 bp ATAATACAAATGTCCTTACAAATAAAAATCTCCCTCCTTCGAGTATaGGGCTCTGTAGCCGTAGAAAGAGTAGTATGGTTACCTACTCCC +
Preference number: 1 (lower is better)
Translates to: IIQMSLQIKISLLRV*GSVAVERVVWLPTP
Trigger: GGGAGTAGGTAACCATACTACTCTTTCTACGGCTACAGAGCCGCATACTCGAAGGAGGGAGATTTTTATTTGTAAGGACATTTGTATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 90 bp ACTTGCAAAAGCACAGAGATTATCAACAGCACCCTCCTCCCACCTTaGCAGAGTAAAAGTGAAGAAGGAATTCATTATAGTCATACATTT +
Preference number: 1 (lower is better)
Translates to: TCKSTEIINSTLLPP*QSKSEEGIHYSHTF
Trigger: AAATGTATGACTATAATGAATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAATCTCTGTGCTTTTGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 90 bp GGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTCTGCCTTaGAATTTAAGTTTAAGCAATAGCATCCATTTCTGGATTTTTCCT +
Preference number: 1 (lower is better)
Translates to: GSRASVEMKILYLLP*NLSLSNSIHFWIFP
Trigger: AGGAAAAATCCAGAAATGGATGCTATTGCTTAAACTTAAATTCCAAGGCAGAAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 90 bp GGAAGAGGAACATATTATGGGACAGAAAGGGCAAATTCTATCCTATaGAAATATACTAGATTAGTTACTGTATTTGGAGAAGAGGCAGCA +
Preference number: 1 (lower is better)
Translates to: GRGTYYGTERANSIL*KYTRLVTVFGEEAA
Trigger: TGCTGCCTCTTCTCCAAATACAGTAACTAATCTAGTATATTTTCATAGGATAGAATTTGCCCTTTCTGTCCCATAATATGTTCCTCTTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 90 bp CCCATGCTGCCAGATCTGGCAATATACTTTATATTGAGATTTAAGTaGGTAAAAGTCTTTGTGCCAAACTTGCAAAAGCACAGAGATTAT +
Preference number: 1 (lower is better)
Translates to: PMLPDLAIYFILRFK*VKVFVPNLQKHRDY
Trigger: ATAATCTCTGTGCTTTTGCAAGTTTGGCACAAAGACTTTTACTCACTTAAATCTCAATATAAAGTATATTGCCAGATCTGGCAGCATGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 90 bp CAACTAGAGAGAAAAAGCTTTTTAAATTTAGAGGCGGTCCAACTCTaGGAGGTCCAACATTCAAATAACAGAAATTCTAGAAAGATAGAA +
Preference number: 1 (lower is better)
Translates to: QLERKSFLNLEAVQL*EVQHSNNRNSRKIE
Trigger: TTCTATCTTTCTAGAATTTCTGTTATTTGAATGTTGGACCTCCCAGAGTTGGACCGCCTCTAAATTTAAAAAGCTTTTTCTCTCTAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTCCAAGATCGCGCCACTaGACTCCGGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIPRSRH*TPAWAT
Trigger: TGTCGCCCAGGCCGGAGTGCAGTGGCGCGATCTTGG...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAGCCAGAGGAGGATTTaGGGGGTGGGGCCGGATGGG +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLSQRRI*GVGPDG
Trigger: CCCATCCGGCCCCACCCCCCAAATCCTCCTCTGGCT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTACACTGCACTCCGGCCTaGGCGACAGAGACTGTCCAA +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLHCTPA*ATETVQ
Trigger: TTGGACAGTCTCTGTCGCCCAGGCCGGAGTGCAGTG...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAGGGGCCGGATGGGCATaGGAGAGGATGAAGATAGAG +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLGAGWA*ERMKIE
Trigger: CTCTATCTTCATCCTCTCTCATGCCCATCCGGCCCC...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CAA 90 bp CTAAATGAGAGCTGTGTTCTAAAGCCTCCCCAAGATGAGGCACCATaGCAAGAGGCTATGGACAATCACCCGAGGATGCCAATTCTGAAG +
Preference number: 2 (lower is better)
Translates to: LNESCVLKPPQDEAP*QEAMDNHPRMPILK
Trigger: CTTCAGAATTGGCATCCTCGGGTGATTGTCCATAGCCTCTTGCAATGGTGCCTCATCTTGGGGAGGCTTTAGAACACAGCTCTCATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTTCCCTCCTTCGAGTATaGGGCTCTGTAGCCGTAGAA +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGISLLRV*GSVAVE
Trigger: TTCTACGGCTACAGAGCCGCATACTCGAAGGAGGGA...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTGGTAAAAGGATCATTTaGGCCTGGGAGGTCGAGACT +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIGKRII*AWEVET
Trigger: AGTCTCGACCTCCCAGGCTCAAATGATCCTTTTACC...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTGCTGTGCATCTTGGCTaGACTGGTAGTCCTGTACTT +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIAVHLG*TGSPVL
Trigger: AAGTACAGGACTACCAGTGCAGCCAAGATGCACAGC...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAAGGCCAACTCTACCTaGTGGCCCTTTAGACAACTT +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIKANST*WPFRQL
Trigger: AAGTTGTCTAAAGGGCCATCAGGTAGAGTTGGCCTT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTGGGCATCTGTGGAAATaGAGATACTCTATCTTCTGC +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIGHLWK*RYSIFC
Trigger: GCAGAAGATAGAGTATCTTCATTTCCACAGATGCCC...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAGTTTGAGATCAGTCTaGACAGCATGGCAAAACCCT +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGISLRSV*TAWQNP
Trigger: AGGGTTTTGCCATGCTGTTCAGACTGATCTCAAACT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTACTGAGACAAGAGAATTaGTTGAACCCAGGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLLRQEN*LNPGSG
Trigger: TCCACTTCCTGGGTTCAAGCAATTCTCTTGTCTCAG...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAGTTTGAGACCACCCTaGCCAACATGTATTTGGAGA +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLSLRPP*PTCIWR
Trigger: TCTCCAAATACATGTTGGCCAGGGTGGTCTCAAACT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAATAGCTCCTGATGGCTaGTTCTATTCTCTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLIAPDG*FYSLSF
Trigger: AAAGGAGAGAGAATAGAATCAGCCATCAGGAGCTAT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTATCTAGGACTGTCTTTTaGAAGAAAATGGCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLSRTVF*KKMASF
Trigger: GAACGAGGCCATTTTCTTTCAAAAGACAGTCCTAGA...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTCCAAGTGTTTGTCTTTaGAATGCTAAACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIPSVCL*NAKLGK
Trigger: CTTCCCCAGTTTAGCATTCCAAAGACAAACACTTGG...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTATGGATTTTTCCTGACTaGAGATCATGCAATAATCCC +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLWIFPD*RSCNNP
Trigger: GGGATTATTGCATGATCTTCAGTCAGGAAAAATCCA...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTATCTCCTTTCATTACATaGCTCACCATTGTTCACTCA +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLSPFIT*LTIVHS
Trigger: TGAGTGAACAATGGTGAGTCATGTAATGAAAGGAGA...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAAGGACTCCTCAAAATaGAAGGTTCCCTTAAGCTTT +
Preference number: 2 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLKDSSK*KVPLSF
Trigger: AAAGCTTAAGGGAACCTTGCATTTTGAGGAGTCCTT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAAAACAAGAAAAACCTaGTTACCTGCTCAACGTCAT +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIKTRKT*LPAQRH
Trigger: ATGACGTTGAGCAGGTAATCAGGTTTTTCTTGTTTT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTCATGTGGTACATCAGTaGACTACATTTATGTCTATC +
Preference number: 2 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIHVVHQ*TTFMSI
Trigger: GATAGACATAAATGTAGTTCACTGATGTACCACATG...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGATCCTGCAGCCTAATCTaGCTTTCTTTCAGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: KILKACYFPDSKLPIKSRSCSLI*LSFRPG
Trigger: TCCTGGCCTGAAAGAAAGCCAGATTAGGCTGCAGGA...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTAGATCACTGATAGGCTaGCAAGAGAACCTCCAAATT +
Preference number: 2 (lower is better)
Translates to: QFKVKGSRASVEMKILYLRSLIG*QENLQI
Trigger: AATTTGGAGGTTCTCTTGGCAGCCTATCAGTGATCT...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAATGAAGTACAACTTATaGGCAGGCAAAGACTCCACT +
Preference number: 2 (lower is better)
Translates to: KILKACYFPDSKLPIKSRMKYNL*AGKDST
Trigger: AGTGGAGTCTTTGCCTGCTCATAAGTTGTACTTCAT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAAGGCAACAAAAATTATaGTTCATTTGTGTCTTCACC +
Preference number: 2 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSRQQKL*FICVFT
Trigger: GGTGAAGACACAAATGAAGCATAATTTTTGTTGCCT...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGACATGAATTCAAAGAGTaGATTGGGGAGACAGAAAGA +
Preference number: 2 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGHEFKE*IGETER
Trigger: TCTTTCTGTCTCCCCAATCCACTCTTTGAATTCATG...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CAA 90 bp TTGGTTTATTCATACTGTCTAAATGATTGCTTAATAACTCAGGTATaGCTTTCAAAAAGTAAGAGGAAGGGTGGGAAATACCCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: LVYSYCLNDCLITQV*LSKSKRKGGKYPVL
Trigger: GAGAACAGGGTATTTCCCACCCTTCCTCTTACTTTTTGAAAGCAATACCTGAGTTATTAAGCAATCATTTAGACAGTATGAATAAACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR TCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGACCCAAAATTTGGTATTaGCAAATCAGTAGTGTCAAC +
Preference number: 2 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGPKIWY*QISSVN
Trigger: GTTGACACTACTGATTTGTCAATACCAAATTTTGGG...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR GCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAATGAAAAACAAGCACTaGTTTTGCTTAGAAGATCAC +
Preference number: 2 (lower is better)
Translates to: KILKACYFPDSKLPIKSRMKNKH*FCLEDH
Trigger: GTGATCTTCTAAGCAAAAGCAGTGCTTGTTTTTCAT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 72 bp TCCACAGCCAGCCTACGCCCCACCCTCAACCTCCACTaGCAGGAAAAACTGAACCTGAGGGTCAGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: STASLRPTLNLH*QEKLNLRVSSQ
Trigger: CTGGCTGCTGACCCTCAGGTTCAGTTTTTCCTGTCAGTGGAGGTTGAGGGTGGGGCGTAGGCTGGCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 72 bp TGTAGAGCACTACGTCCTTTGGAAGGGAGAGACATTTaGCAGAAGAGCAGGAGAGTGTTCACCCACGCCCAC +
Preference number: 3 (lower is better)
Translates to: CRALRPLEGRDI*QKSRRVFTHAH
Trigger: GTGGGCGTGGGTGAACACTCTCCTGCTCTTCTGCCAAATGTCTCTCCCTTCCAAAGGACGTAGTGCTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp AGCTCCTTCTTTAGTACCAGATGCATCATAAAAATGTaGCACTGGGGCCAGGATCCTGACACTGGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: SSFFSTRCIIKM*HWGQDPDTGRP
Trigger: TGGCCTCCCAGTGTCAGGATCCTGGCCCCAGTGGCACATTTTTATGATGCATCTGGTACTAAAGAAGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp AAACACCTCCTGGTAGGCCCCACCTCCCAACACTGTTaGACTGGGAATGAAGGGAATCTACTATTTCTGTAC +
Preference number: 3 (lower is better)
Translates to: KHLLVGPTSQHC*TGNEGNLLFLY
Trigger: GTACAGAAATAGTAGATTCCCTTCATTCCCAGTGCAACAGTGTTGGGAGGTGGGGCCTACCAGGAGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp TACCCATTGCCCTATATTCTCGATGATAGTTACCCCTaGCACCATTCCCCACACCCTCTTAGTAAGCCCATG +
Preference number: 3 (lower is better)
Translates to: YPLPYILDDSYP*HHSPHPLSKPM
Trigger: CATGGGCTTACTAAGAGGGTGTGGGGAATGGTGGCAGGGGTAACTATCATCGAGAATATAGGGCAATGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTACCTGAGCTTAGGAGTTaGAGACCACCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLPELRS*RPPWPT
Trigger: TGTTGGCCAGGGTGGTCTCAAACTCCTAAGCTCAGG...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp GGGTTATTAAAAGACAGACCTCCTCAAAGGAACTCCTaGAGCCTAATCTGGCTTTCTTTCAGGCCAGGACAC +
Preference number: 3 (lower is better)
Translates to: GLLKDRPPQRNS*SLIWLSFRPGH
Trigger: GTGTCCTGGCCTGAAAGAAAGCCAGATTAGGCTGCAGGAGTTCCTTTGAGGAGGTCTGTCTTTTAATAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp CATTCTAATCAGTCTCATGAGTTAATCCTGGTGCTGTaGATCTTGGCTGCACTGGTAGTCCTGTACTTCCGC +
Preference number: 3 (lower is better)
Translates to: HSNQSHELILVL*ILAALVVLYFR
Trigger: GCGGAAGTACAGGACTACCAGTGCAGCCAAGATGCACAGCACCAGGATTAACTCATGAGACTGATTAGAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 72 bp ACAGTTTTGGAGGCTGAGAAATCCAAGATAAGGCACTaGCATGTTAGGGCTCAGTCTCTCGCTTCCAACACT +
Preference number: 3 (lower is better)
Translates to: TVLEAEKSKIRH*HVRAQSLASNT
Trigger: AGTGTTGGAAGCGAGAGACTGAGCCCTAACATGCCAGTGCCTTATCTTGGATTTCTCAGCCTCCAAAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 72 bp CGAGTATGCGGCTCTGTAGCCGTAGAAAGAGTAGTATaGTTACCTACTCCCACTTCCCCTCTAGAAGAGAAT +
Preference number: 3 (lower is better)
Translates to: RVCGSVAVERVV*LPTPTSPLEEN
Trigger: ATTCTCTTCTAGAGGGGAAGTGGGAGTAGGTAACCATACTACTCTTTCTACGGCTACAGAGCCGCATACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAGGAAGGGAGAGACATTaGGCAGAAGAGCAGGAGAGT +
Preference number: 3 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLGRERH*AEEQES
Trigger: ACTCTCCTGCTCTTCTGCCAAATGTCTCTCCCTTCC...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAGAGCACTACGTCCTTaGGAAGGGAGAGACATTTGG +
Preference number: 3 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLRALRP*EGRDIW
Trigger: CCAAATGTCTCTCCCTTCCAAAGGACGTAGTGCTCT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 72 bp AGCTTCCTCACTCAAGTCACCTTCAAGGACCCTGCGTaGACATGGCCTGATTCACAAAAGCAGGAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: SFLTQVTFKDPA*TWPDSQKQERK
Trigger: TTTTCTTTCCTGCTTTTGTGAATCAGGCCATGTTCACGCAGGGTCCTTGAAGGTGACTTGAGTGAGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp AAAGGTCATAAAGCCAGCTCCTTCTTTAGTACCAGATaGATCATAAAAATGTGCCACTGGGGCCAGGATCCT +
Preference number: 3 (lower is better)
Translates to: KGHKASSFFSTR*IIKMCHWGQDP
Trigger: AGGATCCTGGCCCCAGTGGCACATTTTTATGATGCATCTGGTACTAAAGAAGGAGCTGGCTTTATGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 72 bp AAACCAGGAGGAAGTGCAATACCTAACCTAGCAGAGTaGAGGAAGTTAAAGCCTAAGTACCCAAAAGGGAGA +
Preference number: 3 (lower is better)
Translates to: KPGGSAIPNLAE*RKLKPKYPKGR
Trigger: TCTCCCTTTTGGGTACTTAGGCTTTAACTTCCTCCACTCTGCTAGGTTAGGTATTGCACTTCCTCCTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 72 bp CACACACACACACACACACACACACACACCCAGAACTaGAGCAGACAAATCTCTAAATTGAAAGATTCCACC +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHTQN*SRQISKLKDST
Trigger: GGTGGAATCTTTCAATTTAGAGATTTGTCTGCTTCAGTTCTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 72 bp GTGCTGGGAGAAAAAGATGGCAGCACTGAGCGGGACTaGAAAGTTTTCCTAGAACATCTCCTTTCATTACAT +
Preference number: 3 (lower is better)
Translates to: VLGEKDGSTERD*KVFLEHLLSLH
Trigger: ATGTAATGAAAGGAGATGTTCTAGGAAAACTTTTCAGTCCCGCTCAGTGCTGCCATCTTTTTCTCCCAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTTCAGCATTTAAGCCTTaGGATAGTCATTGTGACAGG +
Preference number: 3 (lower is better)
Translates to: IINSTLLPPCQSKSEEGISAFKP*DSHCDR
Trigger: CCTGTCACAATGACTATCCAAAGGCTTAAATGCTGA...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp AGCACAGAGATTATCAACAGCACCCTCCTCCCACCTTaGCAGAGTAAAAGTGAAGAAGGAATTCATTATAGT +
Preference number: 3 (lower is better)
Translates to: STEIINSTLLPP*QSKSEEGIHYS
Trigger: ACTATAATGAATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAATCTCTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 72 bp AAAGTTGCAATCTGTGCCTTTTCCCCTCAAAGGTCATaGCCTAGATTAACCAAATATGGCAAGGAGAATGGA +
Preference number: 3 (lower is better)
Translates to: KVAICAFSPQRS*PRLTKYGKENG
Trigger: TCCATTCTCCTTGCCATATTTGGTTAATCTAGGCCATGACCTTTGAGGGGAAAAGGCACAGATTGCAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAAAAGTCAGGCACACTaGAAAATAAAGGACTCCTCA +
Preference number: 3 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLKSQAH*KIKDSS
Trigger: TGAGGAGTCCTTTATTTTCAAGTGTGCCTGACTTTT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTAAAATTATGCTTCATTaGTGTCTTCACCAGCAGGCC +
Preference number: 3 (lower is better)
Translates to: QFKVKGSRASVEMKILYLKIMLH*CLHQQA
Trigger: GGCCTGCTGGTGAAGACACAAATGAAGCATAATTTT...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 72 bp ACACTACGTGCCCAGCACTTTTCTAACTGCTTTTTATaGATTGATTCTTCTAATCCTCACAACCCTATGAGG +
Preference number: 3 (lower is better)
Translates to: TLRAQHFSNCFL*IDSSNPHNPMR
Trigger: CCTCATAGGGTTGTGAGGATTAGAAGAATCAATTCATAAAAAGCAGTTAGAAAAGTGCTGGGCACGTAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR GCA 72 bp AAGAATTGTATCAAAATCCCTTTAGTCATGGAGGCCTaGGATTCCCAAAGAATAGTGAGCAAGCACTTGAAA +
Preference number: 3 (lower is better)
Translates to: KNCIKIPLVMEA*DSQRIVSKHLK
Trigger: TTTCAAGTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTTGATACAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGACACGAACCCATCTATTaGGGTAAAGCAATAGAAAAT +
Preference number: 3 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGHEPIY*GKAIEN
Trigger: ATTTTCTATTGCTTTACCCAAATAGATGGGTTCGTG...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR-3UTR CAA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAAAACAAGCACTGCTTTaGCTTAGAAGATCACTGATA +
Preference number: 3 (lower is better)
Translates to: KILKACYFPDSKLPIKSRKQALL*LRRSLI
Trigger: TATCAGTGATCTTCTAAGCAAAAGCAGTGCTTGTTT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CCA 72 bp AGAAAAAGCTTTTTAAATTTAGAGGCGGTCCAACTCTaGGAGGTCCAACATTCAAATAACAGAAATTCTAGA +
Preference number: 3 (lower is better)
Translates to: RKSFLNLEAVQL*EVQHSNNRNSR
Trigger: TCTAGAATTTCTGTTATTTGAATGTTGGACCTCCCAGAGTTGGACCGCCTCTAAATTTAAAAAGCTTTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR TCA 72 bp CCAGATCTGGCAATATACTTTATATTGAGATTTAAGTaGGTAAAAGTCTTTGTGCCAAACTTGCAAAAGCAC +
Preference number: 3 (lower is better)
Translates to: PDLAIYFILRFK*VKVFVPNLQKH
Trigger: GTGCTTTTGCAAGTTTGGCACAAAGACTTTTACTCACTTAAATCTCAATATAAAGTATATTGCCAGATCTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAGCCAGAGGAGGATTTaGGGGGTGGGGCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGISQRRI*GVGPDG
Trigger: CCCATCCGGCCCCACCCCCCAAATCCTCCTCTGGCT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CAA 72 bp AGCTGTGTTCTAAAGCCTCCCCAAGATGAGGCACCATaGCAAGAGGCTATGGACAATCACCCGAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SCVLKPPQDEAP*QEAMDNHPRMP
Trigger: TGGCATCCTCGGGTGATTGTCCATAGCCTCTTGCAATGGTGCCTCATCTTGGGGAGGCTTTAGAACACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTCCGAGATCGCGCCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIPRSRH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGGCGCGATCTCGG...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CAA 72 bp CCCGAGGATGCCAATTCTGAAGGCATGCTGAATCACTaGGATAACCCAGCAACCCCTAGCGACCACAAATAC +
Preference number: 4 (lower is better)
Translates to: PEDANSEGMLNH*DNPATPSDHKY
Trigger: GTATTTGTGGTCGCTAGGGGTTGCTGGGTTATCCAAGTGATTCAGCATGCCTTCAGAATTGGCATCCTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACAAGCAAAGGTTGCAGTaGGCCGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHKQRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCGGCTCACTGCAACCTTTGCTT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACCTGGAAAGCAAAGGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHLESKG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACCTTTGCTTTCCAG...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACAACATCAGCTGGGCATaGTGGTGCGTGCCTACAGTC +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHNISWA*WCVPTV
Trigger: GACTGTAGGCACGCACCACCATGCCCAGCTGATGTT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAAGTGGAAGTTGCAGTaGGCCAAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLKWKLQ*AKIAPL
Trigger: CAGTGGCGCGATCTTGGCTCACTGCAACTTCCACTT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTGCCAAGGCAGGTAGATaGCCTGAGGTCAGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIAKAGR*PEVRSS
Trigger: TGAACTCCTGACCTCAGGTCATCTACCTGCCTTGGC...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAGGTGGAGGTTGCAGTaGGCCAAGATCGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIRWRLQ*AKIVSL
Trigger: CAGTGACACGATCTTGGCTCACTGCAACCTCCACCT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACGATGATAGTTACCCCTaGCACCATTCCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHDDSYP*HHSPHP
Trigger: AGGGTGTGGGGAATGGTGGCAGGGGTAACTATCATC...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAGGGGCCGGATGGGCATaGGAGAGGATGAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSGAGWA*ERMKIE
Trigger: CTCTATCTTCATCCTCTCTCATGCCCATCCGGCCCC...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACATACAAAACATCAGCTaGGCATGGTGGTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHIQNIS*AWWCVP
Trigger: AGGCACGCACCACCATGCCCAGCTGATGTTTTGTAT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACAAGGCCAACTCTACCTaGTGGCCCTTTAGACAACTT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHKANST*WPFRQL
Trigger: AAGTTGTCTAAAGGGCCATCAGGTAGAGTTGGCCTT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACAGAGAAGACCTCCACTaGAATTTAGGGGACCTCAAC +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHREDLH*NLGDLN
Trigger: GTTGAGGTCCCCTAAATTTCAGTGGAGGTCTTCTCT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTATTCAAGGACCCTGCGTaGACATGGCCTGATTCACAA +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLFKDPA*TWPDSQ
Trigger: TTGTGAATCAGGCCATGTTCACGCAGGGTCCTTGAA...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACACCTCCCAACACTGTTaGACTGGGAATGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHTSQHC*TGNEGN
Trigger: ATTCCCTTCATTCCCAGTGCAACAGTGTTGGGAGGT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACACCCTCCTCCCACCTTaGCAGAGTAAAAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHTLLPP*QSKSEE
Trigger: TTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACTGCATCATAAAAATGTaGCACTGGGGCCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHCIIKM*HWGQDP
Trigger: AGGATCCTGGCCCCAGTGGCACATTTTTATGATGCA...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACACCATAGAACAGGCCTaGAGGGCAACAGTACAAATG +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHTIEQA*RATVQM
Trigger: CATTTGTACTGTTGCCCTCCAGGCCTGTTCTATGGT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTATGTATAAAGAGCAACTaGAACCCAGGTCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLCIKSN*NPGPLP
Trigger: GGGGAGAGGACCTGGGTTCCAGTTGCTCTTTATACA...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTGAAGGGAGAGACATTTaGCAGAAGAGCAGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIEGRDI*QKSRRV
Trigger: CACTCTCCTGCTCTTCTGCCAAATGTCTCTCCCTTC...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACATAAAAATGTGCCACTaGGGCCAGGATCCTGACACT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHIKMCH*GQDPDT
Trigger: AGTGTCAGGATCCTGGCCCCAGTGGCACATTTTTAT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACAGTTTGAGATCAGTCTaGACAGCATGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHSLRSV*TAWQNP
Trigger: AGGGTTTTGCCATGCTGTTCAGACTGATCTCAAACT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACGACAAGAGAATTGCTTaGACCCAGGAAGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHDKRIA*TQEVEV
Trigger: AACTTCCACTTCCTGGGTTCAAGCAATTCTCTTGTC...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACGCATTAATCTATTCATaGGGGTGGTACCCACATGAC +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHALIYS*GWYPHD
Trigger: GTCATGTGGGTACCACCCTCATGAATAGATTAATGC...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACAAAAGATGGCAGCACTaGGCGGGACTGAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHKRWQH*AGLKSF
Trigger: AAAACTTTTCAGTCCCGCTCAGTGCTGCCATCTTTT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTACCACCCTGCTATGGATaGGCTAATCCAAACTATTGC +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLPPCYG*ANPNYC
Trigger: GCAATAGTTTGGATTAGCTCATCCATAGCAGGGTGG...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTACGAGGATGCCAATTCTaGAGGCATGCTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLRGCQF*RHAESL
Trigger: AAGTGATTCAGCATGCCTTCAGAATTGGCATCCTCG...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTAAAGCCTCCCCAAGATaGGGCACCATTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLKASPR*GTIARG
Trigger: GCCTCTTGCAATGGTGCCTCATCTTGGGGAGGCTTT...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTCCTCAAAGGAACTCCTaGAGCCTAATCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIPQRNS*SLIWLS
Trigger: AGAAAGCCAGATTAGGCTGCAGGAGTTCCTTTGAGG...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACCTGAGACAAGAGAATTaGTTGAACCCAGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHLRQEN*LNPGSG
Trigger: TCCACTTCCTGGGTTCAAGCAATTCTCTTGTCTCAG...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTTTAATCCTGGTGCTGTaGATCTTGGCTGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGILILVL*ILAALV
Trigger: TACCAGTGCAGCCAAGATGCACAGCACCAGGATTAA...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAATATGGCAAGGAGAATaGAGGGCAACTCATCCCTGT +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLIWQGE*RATHPC
Trigger: ACAGGGATGAGTTGCCCTCCATTCTCCTTGCCATAT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCACCCGTTTGTTTTCATTaGCCCCGACGTCGATTTCAC +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSPVCFH*PRRRFH
Trigger: GTGAAATCGACGTCGGGGTCAATGAAAACAAACGGG...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTATTAGTCATGGAGGCCTaGGATTCCCAAAGAATAGTG +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLLVMEA*DSQRIV
Trigger: CACTATTCTTTGGGAATCGCAGGCCTCCATGACTAA...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAAGATGAGGCACCATTaGAAGAGGCTATGGACAATC +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIKMRHH*KRLWTI
Trigger: GATTGTCCATAGCCTCTTGCAATGGTGCCTCATCTT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCATCCTGCAGCCTAATCTaGCTTTCTTTCAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSSCSLI*LSFRPG
Trigger: TCCTGGCCTGAAAGAAAGCCAGATTAGGCTGCAGGA...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACCCAAGTGTTTGTCTTTaGAATGCTAAACTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHPSVCL*NAKLGK
Trigger: CTTCCCCAGTTTAGCATTCCAAAGACAAACACTTGG...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAGGGGGAAGAAAAATGTaGGAGGTGGAGAGTTTAAGT +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLGGRKM*EVESLS
Trigger: ACTTAAACTCTCCACCTCCCACATTTTTCTTCCCCC...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTGGGCAACAGTACAAATaGCAGAAGATGAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIGQQYK*QKMKDC
Trigger: ACAGTCCTTCATCTTCTGCCATTTGTACTGTTGCCC...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAGTTTGAGACCACCCTaGCCAACATGTATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGISLRPP*PTCIWR
Trigger: TCTCCAAATACATGTTGGCCAGGGTGGTCTCAAACT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAGGAGACAGAAAGACATaGACAAGAAGGCCTACCTAC +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSGDRKT*TRRPTY
Trigger: GTAGGTAGGCCTTCTTGTTCATGTCTTTCTGTCTCC...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTACAAATGGCAGAAGATaGAGGACTGTGGAAGAAATG +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGITNGRR*RTVEEM
Trigger: CATTTCTTCCACAGTCCTTCATCTTCTGCCATTTGT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAGATCACTGATAGGCTaGCAAGAGAACCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLRSLIG*QENLQI
Trigger: AATTTGGAGGTTCTCTTGGCAGCCTATCAGTGATCT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTAGAGAGATAGGAGAGTaGAGTGTGGCTCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLREIGE*SVAHAC
Trigger: ACAGGCATGAGCCACACTGCACTCTCCTATCTCTCT...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACTGTTCACTCATAAAATaGTTCACCGCATCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHCSLIK*FTASKR
Trigger: CCTTTTGGATGCGGTGAAGCATTTTATGAGTGAACA...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACCATGAATTCAAAGAGTaGATTGGGGAGACAGAAAGA +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHHEFKE*IGETER
Trigger: TCTTTCTGTCTCCCCAATCCACTCTTTGAATTCATG...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTTCTCCTTTCATTACATaGCTCACCATTGTTCACTCA +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGISPFIT*LTIVHS
Trigger: TGAGTGAACAATGGTGAGTCATGTAATGAAAGGAGA...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTTGCGTGAACATGGCCTaGTTCACAAAAGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLCVNMA*FTKAGK
Trigger: CTTTCCTGCTTTTGTGAATCAGGCCATGTTCACGCA...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCATTATTTACAGCCATTTaGCACGCCCATGGGACTCTA +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSLFTAI*HAHGTL
Trigger: TAGAGTCCCATGGGCGTGGCAAATGGCTGTAAATAA...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTACAACTAAGAAACTGTaGATACAGATGCATGCACAG +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGITTKKL*IQMHAQ
Trigger: CTGTGCATGCATCTGTATGCACAGTTTCTTAGTTGT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTTCCAAGATAAGGCACTaGCATGTTAGGGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLSKIRH*HVRAQS
Trigger: AGACTGAGCCCTAACATGCCAGTGCCTTATCTTGGA...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAATGAAGTACAACTTATaGGCAGGCAAAGACTCCACT +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSMKYNL*AGKDST
Trigger: AGTGGAGTCTTTGCCTGCTCATAAGTTGTACTTCAT...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAGAAAGGCTTCAGAATaGAAGAGCCCAAAACAAATA +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIRKASE*KSPKQI
Trigger: TATTTGTTTTGGGCTCTTTCATTCTGAAGCCTTTCT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAGGTAAAAGGATCATTTaGGCCTGGGAGGTCGAGACT +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGGKRII*AWEVET
Trigger: AGTCTCGACCTCCCAGGCTCAAATGATCCTTTTACC...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCATGTGGTTATAGCTCCTaGTGGCTGATTCTATTCTCT +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSCGYSS*WLILFS
Trigger: AGAGAATAGAATCAGCCATCAGGAGCTATAACCACA...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTCTGGCCCACAGTAAATaGTCTAAATGTTTTATTACC +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGILAHSK*SKCFIT
Trigger: GGTAATAAAACATTTAGAGCATTTACTGTGGGCCAG...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAGCTGTGCATCTTGGCTaGACTGGTAGTCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGAVHLG*TGSPVL
Trigger: AAGTACAGGACTACCAGTGCAGCCAAGATGCACAGC...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACATTCAACAGAAGAGCTaGAGGATAACAAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHIQQKS*RITKRT
Trigger: TGTTCTTTTTGTTATCCTCCAGCTCTTCTGTTGAAT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAGTAGAAAGAGTAGTATaGTTACCTACTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSVERVV*LPTPTS
Trigger: GGAAGTGGGAGTAGGTAACCATACTACTCTTTCTAC...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTTATACTAGAAAAGAATaGTTACCTCTAGGGGATGGA +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIYTRKE*LPLGDG
Trigger: TCCATCCCCTAGAGGTAACCATTCTTTTCTAGTATA...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTTCTAGGACTGTCTTTTaGAAGAAAATGGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLSRTVF*KKMASF
Trigger: GAACGAGGCCATTTTCTTTCAAAAGACAGTCCTAGA...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAGGCAACAAAAATTATaGTTCATTTGTGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLRQQKL*FICVFT
Trigger: GGTGAAGACACAAATGAAGCATAATTTTTGTTGCCT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAAGTGTGCGTACTTATTaGTACACACTTTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSSVRTY*YTLFSS
Trigger: GCTAGAGAAAAGTGTGTAGCAATAAGTACGCACACT...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTTATCTGACAAAAATCTaGGTGGTTAACCCTTACTAT +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIYLTKI*VVNPYY
Trigger: ATAGTAAGGGTTAACCACCCAGATTTTTGTCAGATA...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTAGAGTTCATCCTAGTTaGATAGTGAAAACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIRVHPS*IVKTEN
Trigger: GTTTTCTGTTTTCACTATCCAACTAGGATGAACTCT...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAGAACGCTTCATCATTTaGACAGGAGAAGGTGACACA +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGERFII*TGEGDT
Trigger: TGTGTCACCTTCTCCTGTTCAAATGATGAAGCGTTC...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAAAAACAAGAAAAACCTaGTTACCTGCTCAACGTCAT +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSKTRKT*LPAQRH
Trigger: ATGACGTTGAGCAGGTAATCAGGTTTTTCTTGTTTT...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGACACAGTTTTGGAGGCTaGGAAATCCAAGATAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGHSFGG*EIQDKA
Trigger: TGCCTTATCTTGGATTTCTCAGCCTCCAAAACTGTG...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAAGCACTGAGCGGGACTaGAAAGTTTTCCTAGAACAT +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGSTERD*KVFLEH
Trigger: ATGTTCTAGGAAAACTTTTCAGTCCCGCTCAGTGCT...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAATTCTGAAGGCATGCTaGATCACTTGGATAACCCAG +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGILKAC*ITWITQ
Trigger: CTGGGTTATCCAAGTGATTCAGCATGCCTTCAGAAT...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAATCCAAAAGGAGTTCTaGCTACTAATACCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSIQKEF*LLIPEK
Trigger: CTTTTCTGGTATTAGTAGGCAGAACTCCTTTTGGAT...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGACCTAACCTAGCAGAGTaGAGGAAGTTAAAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGPNLAE*RKLKPK
Trigger: CTTAGGCTTTAACTTCCTCCACTCTGCTAGGTTAGG...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAAAAATTAGCCAGGCATaGTGGTGCTCGCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRKISQA*WCSPVI
Trigger: AATTACAGGCGAGCACCACCATGCCTGGCTAATTTT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234453.10
3UTR CAA 72 bp TTCCTAGAACATCTCCTTTCATTACATGACTCACCATaGTTCACTCATAAAATGCTTCACCGCATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: FLEHLLSLHDSP*FTHKMLHRIQK
Trigger: CTTTTGGATGCGGTGAAGCATTTTATGAGTGAACAATGGTGAGTCATGTAATGAAAGGAGATGTTCTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTCATGTGGTACATCAGTaGACTACATTTATGTCTATC +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLHVVHQ*TTFMSI
Trigger: GATAGACATAAATGTAGTTCACTGATGTACCACATG...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAACACACACCCAGAACTaGAGCAGACAAATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRTHTQN*SRQISK
Trigger: TTTAGAGATTTGTCTGCTTCAGTTCTGGGTGTGTGT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTAGGTTATGGATACAGTaGTGGGAATTTACCATAAAG +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLRLWIQ*WEFTIK
Trigger: CTTTATGGTAAATTCCCATCACTGTATCCATAACCT...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAATAGCTCCTGATGGCTaGTTCTATTCTCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRIAPDG*FYSLSF
Trigger: AAAGGAGAGAGAATAGAATCAGCCATCAGGAGCTAT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR GCA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTTCTTTGTGCCAAACTTaGAAAAGCACAGAGATTATC +
Preference number: 4 (lower is better)
Translates to: QFKVKGSRASVEMKILYLSLCQT*KSTEII
Trigger: GATAATCTCTGTGCTTTTGCAAGTTTGGCACAAAGA...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGATTTGGAATGCTAAACTaGGGAAGAGGGAACTACACT +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRFGMLN*GRGNYT
Trigger: AGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAA...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAGTAATCCGAGAATTTTaGAAAGTCAAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGVIREF*KVKAGR
Trigger: TCTGCCTGCCTTGACTTTCCAAAATTCTCGGATTAC...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGATGTGACAAGGGTCTTTaGATTCATGAAGGCACTATT +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRCDKGL*IHEGTI
Trigger: AATAGTGCCTTCATGAATTCAAAGACCCTTGTCACA...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGACAGCATTTAAGCCTTTaGATAGTCATTGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGQHLSL*IVIVTG
Trigger: ACCTGTCACAATGACTATCCAAAGGCTTAAATGCTG...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGACCCAAAATTTGGTATTaGCAAATCAGTAGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRPKIWY*QISSVN
Trigger: GTTGACACTACTGATTTGTCAATACCAAATTTTGGG...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGATACAAACCAACCACATaGATTTATTTCCTCTACCTC +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRYKPTT*IYFLYL
Trigger: GAGGTAGAGGAAATAAATTCATGTGGTTGGTTTGTA...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAGTAACTAAGCAAAACTaGATCCACCCTGTCATATAT +
Preference number: 4 (lower is better)
Translates to: KILKACYFPDSKLPIKSRVTKQN*IHPVIY
Trigger: ATATATGACAGGGTGGATTCAGTTTTGCTTAGTTAC...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR TCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAGATGGAGTGTCAAGGTaGATTTTGGTTTATTCATAC +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGDGVSR*ILVYSY
Trigger: GTATGAATAAACCAAAATTCACCTTGACACTCCATC...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CCA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAATTAGTTACTGTATTTaGAGAAGAGGCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGISYCI*RRGSIR
Trigger: CCTTATGCTGCCTCTTCTCCAAATACAGTAACTAAT...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAGTTGAGTCACGAGAATaGCTTGAGCCCCGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLVESRE*LEPRRW
Trigger: CCACCTCCGGGGCTCAAGCAATTCTCGTGACTCAAC...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTACTGGTGCTGTGCATCTaGGCTGCACTGGTAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLLVLCI*AALVVL
Trigger: CAGGACTACCAGTGCAGCCAAGATGCACAGCACCAG...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS CCA 90 bp CAAACCAACGAGGCTGCCAGCCTGCACATTTTGCACAAGATCAGGTaGACACAAGTCGAGAGTACCACACAATTACTGAGGGATGTGATA +
Preference number: 5 (lower is better)
Translates to: QTNEAASLHILHKIR*TQVESTTQLLRDVI
Trigger: TATCACATCCCTCAGTAATTGTGTGGTACTCTCGACTTGTGTCCACCTGATCTTGTGCAAAATGTGCAGGCTGGCAGCCTCGTTGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461474.1
CDS-3UTR CAA 90 bp ATTATCAACAGCACCCTCCTCCCACCTTGCCAGAGTAAAAGTGAAGAAGGAATTCCTGAGCTTAGGAGTTaGAGACCACCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: IINSTLLPPCQSKSEEGIPELRS*RPPWPT
Trigger: TGTTGGCCAGGGTGGTCTCAAACTCCTAAGCTCAGG...AATTCCTTCTTCACTTTTACTCTGGCAAGGTGGGAGGAGGGTGCTGTTGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACGGCATGCTGAATCACTaGGATAACCCAGCAACCCCT +
Preference number: 5 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHGMLNH*DNPATP
Trigger: AGGGGTTGCTGGGTTATCCAAGTGATTCAGCATGCC...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTAAGGCAGGAGAATCGCTaGAACCTGGAAAGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLRQENR*NLESKG
Trigger: ACCTTTGCTTTCCAGGTTCAAGCGATTCTCCTGCCT...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACAGACAAGAGAATTGCTaGAACCCAGGAAGTGGAAGT +
Preference number: 5 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHRQENC*NPGSGS
Trigger: ACTTCCACTTCCTGGGTTCAAGCAATTCTCTTGTCT...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACTCAGCATTTAAGCCTTaGGATAGTCATTGTGACAGG +
Preference number: 5 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHSAFKP*DSHCDR
Trigger: CCTGTCACAATGACTATCCAAAGGCTTAAATGCTGA...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAGCTGAGACAAGAGAATaGCTTGAACCCAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSAETRE*LEPRKW
Trigger: CCACTTCCTGGGTTCAAGCAATTCTCTTGTCTCAGC...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCACTGGCCAACATGTATTaGGAGAAGAGGCAGCATAAG +
Preference number: 5 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSLANMY*EKRQHK
Trigger: CTTATGCTGCCTCTTCTCCAAATACATGTTGGCCAG...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp AAAATCCCTTTAGTCATGGAGGCCTGCGATTCCCAAAGAATAGTGAGCAAGCACGTCTTTGTGCCAAACTaGCAAAAGCACAGAGATTAT +
Preference number: 5 (lower is better)
Translates to: KIPLVMEACDSQRIVSKHVFVPN*QKHRDY
Trigger: ATAATCTCTGTGCTTTTGCAAGTTTGGCACAAAGAC...GTGCTTGCTCACTATTCTTTGGGAATCGCAGGCCTCCATGACTAAAGGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAGGAAGGGAGAGACATTaGGCAGAAGAGCAGGAGAGT +
Preference number: 5 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGGRERH*AEEQES
Trigger: ACTCTCCTGCTCTTCTGCCAAATGTCTCTCCCTTCC...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTTTTATTTACAGCCATTaGCCACGCCCATGGGACTCT +
Preference number: 5 (lower is better)
Translates to: QFKVKGSRASVEMKILYLFIYSH*PRPWDS
Trigger: AGAGTCCCATGGGCGTGGCAAATGGCTGTAAATAAA...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp GGCAGTTTGCTATCCATGGTCATGATGGTAAACCACAGTAAGTGTGCGTACTTACACGAACCCATCTATTaGGGTAAAGCAATAGAAAAT +
Preference number: 5 (lower is better)
Translates to: GSLLSMVMMVNHSKCAYLHEPIY*GKAIEN
Trigger: ATTTTCTATTGCTTTACCCAAATAGATGGGTTCGTG...TAAGTACGCACACTTACTGTGGTTTACCATCATGACCATGGATAGCAAACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp GTAAGTCCACAACATTTTCTGAAAGGTGTACAACTATTTACAAGAGGTTATGGAAGAGCACTACGTCCTTaGGAAGGGAGAGACATTTGG +
Preference number: 5 (lower is better)
Translates to: VSPQHFLKGVQLFTRGYGRALRP*EGRDIW
Trigger: CCAAATGTCTCTCCCTTCCAAAGGACGTAGTGCTCT...TCCATAACCTCTTGTAAATAGTTGTACACCTTTCAGAAAATGTTGTGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGATCACTGCACTCTAACTaGGGCTACAGAGTGAGACTC +
Preference number: 5 (lower is better)
Translates to: KILKACYFPDSKLPIKSRSLHSN*GYRVRL
Trigger: GAGTCTCACTCTGTAGCCCAAGTTAGAGTGCAGTGA...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAAAAAGTCAGGCACACTaGAAAATAAAGGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSKSQAH*KIKDSS
Trigger: TGAGGAGTCCTTTATTTTCAAGTGTGCCTGACTTTT...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTTCTATTCTCTCTCCTTaGTTCCTAATTGTCCCCATG +
Preference number: 5 (lower is better)
Translates to: QFKVKGSRASVEMKILYLSILSP*FLIVPM
Trigger: CATGGGGACAATTAGGAACAAAGGAGAGAGAATAGA...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp CAAGTGTTTGTCTTTGGAATGCTAAACTGGGGAAGAGGGAACTACACTTTTTCAGTTAGAATATACCCATaGCCCTATATTCTCGATGAT +
Preference number: 5 (lower is better)
Translates to: QVFVFGMLNWGRGNYTFSVRIYP*PYILDD
Trigger: ATCATCGAGAATATAGGGCAATGGGTATATTCTAAC...TGAAAAAGTGTAGTTCCCTCTTCCCCAGTTTAGCATTCCAAAGACAAACACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAAAAATTATGCTTCATTaGTGTCTTCACCAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: KILKACYFPDSKLPIKSRKIMLH*CLHQQA
Trigger: GGCCTGCTGGTGAAGACACAAATGAAGCATAATTTT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp CAATTCAAGGTCAAAGGTTCTAGGGCATCTGTGGAAATGAAGATACTCTATCTTAAACAAGCACTGCTTTaGCTTAGAAGATCACTGATA +
Preference number: 5 (lower is better)
Translates to: QFKVKGSRASVEMKILYLKQALL*LRRSLI
Trigger: TATCAGTGATCTTCTAAGCAAAAGCAGTGCTTGTTT...AAGATAGAGTATCTTCATTTCCACAGATGCCCTAGAACCTTTGACCTTGAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS-3UTR CAA 90 bp AAAATTCTGAAGGCATGTTATTTTCCAGACTCCAAACTACCAATCAAGAGTAGAAGTAAGAAGGCCATTTaGGGGAACTCTATAATCATC +
Preference number: 5 (lower is better)
Translates to: KILKACYFPDSKLPIKSRSKKAI*GNSIII
Trigger: GATGATTATAGAGTTCCCCAAAATGGCCTTCTTACT...TCTACTCTTGATTGGTAGTTTGGAGTCTGGAAAATAACATGCCTTCAGAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234453.10
CDS CCA 72 bp GAGGCTGCCAGCCTGCACATTTTGCACAAGATCAGGTaGACACAAGTCGAGAGTACCACACAATTACTGAGG +
Preference number: 6 (lower is better)
Translates to: EAASLHILHKIR*TQVESTTQLLR
Trigger: CCTCAGTAATTGTGTGGTACTCTCGACTTGTGTCCACCTGATCTTGTGCAAAATGTGCAGGCTGGCAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461474.1
CDS CAA 72 bp GAGAGTACCACACAATTACTGAGGGATGTGATACTTTaGGCAGAGCGAAGAAGTGGGCAGCAAGTCATGATT +
Preference number: 6 (lower is better)
Translates to: ESTTQLLRDVIL*AERRSGQQVMI
Trigger: AATCATGACTTGCTGCCCACTTCTTCGCTCTGCCAAAAGTATCACATCCCTCAGTAATTGTGTGGTACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461474.1
CDS CAA 90 bp ACACAAGTCGAGAGTACCACACAATTACTGAGGGATGTGATACTTTaGGCAGAGCGAAGAAGTGGGCAGCAAGTCATGATTTGCCTATTA +
Preference number: 6 (lower is better)
Translates to: TQVESTTQLLRDVIL*AERRSGQQVMICLL
Trigger: TAATAGGCAAATCATGACTTGCTGCCCACTTCTTCGCTCTGCCAAAAGTATCACATCCCTCAGTAATTGTGTGGTACTCTCGACTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461474.1