RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107679

Ensembl transcript IDs: ENST00000368988.5, ENST00000368989.6, ENST00000368990.7, ENST00000392799.7, ENST00000433307.2, ENST00000463663.6, ENST00000481451.1, ENST00000494222.5

Found 666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGCAGAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGTCCAAGTCTACTAGGTCACAATCTT +
Preference number: 1 (lower is better)
Translates to: RQRQAGSVRFCLTRH*PEGSHRPSLLGHNL
Trigger: AAGATTGTGACCTAGTAGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTCTGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR TCA 90 bp TTTCCCCCTTTATCATCTTTGGCTAGAAGCCTCATGAAAGGAAACTaGGGACGGCAGAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACA +
Preference number: 1 (lower is better)
Translates to: FPPLSSLARSLMKGN*GRQRQAGSVRFCLT
Trigger: TGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAGGCTTCTAGCCAAAGATGATAAAGGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR GCA 90 bp CCCAAGTACAGTGAGAAGCCAACAGTTACAGCTTCGTTGCTAACGTaGCCCATGGGCCAGGCAAATCCTCCTCCTTTCTGGGGTCTCAAT +
Preference number: 1 (lower is better)
Translates to: PKYSEKPTVTASLLT*PMGQANPPPFWGLN
Trigger: ATTGAGACCCCAGAAAGGAGGAGGATTTGCCTGGCCCATGGGGCACGTTAGCAACGAAGCTGTAACTGTTGGCTTCTCACTGTACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp GTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTaGGTCATGGAAGGTAATGAGGAGCTCACGAAATGGACAGACAGG +
Preference number: 1 (lower is better)
Translates to: VSAVEAREAPCHMEK*VMEGNEELTKWTDR
Trigger: CCTGTCTGTCCATTTCGTGAGCTCCTCATTACCTTCCATGACTCACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp CAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGAGTCATaGAAGGTAATGAGGAGCTCACGAAATGGACAGACAGGGAAGCTA +
Preference number: 1 (lower is better)
Translates to: QWKPGRLRVTWKSES*KVMRSSRNGQTGKL
Trigger: TAGCTTCCCTGTCTGTCCATTTCGTGAGCTCCTCATTACCTTCCATGACTCACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp TTGTCCCCACCACTCCATCAGAACAGGCCCTGGCAAGATCACCAATaGCATCTGTACTGTCCACGTTGCCAAACACAAAGGGCATTTCTC +
Preference number: 1 (lower is better)
Translates to: LSPPLHQNRPWQDHQ*HLYCPRCQTQRAFL
Trigger: GAGAAATGCCCTTTGTGTTTGGCAACGTGGACAGTACAGATGTCATTGGTGATCTTGCCAGGGCCTGTTCTGATGGAGTGGTGGGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp GGAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGACTCGTAAAATCCTCGCTTCTCCAT +
Preference number: 1 (lower is better)
Translates to: GSWFSWRDSLDLEVP*LDLGKRLVKSSLLH
Trigger: ATGGAGAAGCGAGGATTTTACGAGTCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR TCA 90 bp CCGGAACATCAGTCACTTTCAAGGAAGCAGGCTCCTGGACAAGTATaGCTGAAATTGTTACCCAGGCTATTATCACCTCCCATGGCTGGC +
Preference number: 1 (lower is better)
Translates to: PEHQSLSRKQAPGQV*LKLLPRLLSPPMAG
Trigger: GCCAGCCATGGGAGGTGATAATAGCCTGGGTAACAATTTCAGTCATACTTGTCCAGGAGCCTGCTTCCTTGAAAGTGACTGATGTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 90 bp GGAAGGTGGGAAACAGGGAGATGGAAAGGTTCAGTTGAACTGGAGTaGCAGATATACACAGAAGCACTGTGTGAGAAGGTGGACATGGAA +
Preference number: 1 (lower is better)
Translates to: GRWETGRWKGSVELE*QIYTEALCEKVDME
Trigger: TTCCATGTCCACCTTCTCACACAGTGCTTCTGTGTATATCTGGCACTCCAGTTCAACTGAACCTTTCCATCTCCCTGTTTCCCACCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 90 bp TCCTCACTGGAGAAGTATTTAAGCTTTACCAAGTGCACCAAGCACTaGACTAGGCCCTGTATATGGTGTTCACCGCAACAGACGTGGAAT +
Preference number: 1 (lower is better)
Translates to: SSLEKYLSFTKCTKH*TRPCIWCSPQQTWN
Trigger: ATTCCACGTCTGTTGCGGTGAACACCATATACAGGGCCTAGTGCAGTGCTTGGTGCACTTGGTAAAGCTTAAATACTTCTCCAGTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp GCAGTGGACAAACACCATGGTAACAATCAGGTGTCCAAGACCCAATaGGAAAGAAAGGAACACCGGAACATCAGTCACTTTCAAGGAAGC +
Preference number: 1 (lower is better)
Translates to: AVDKHHGNNQVSKTQ*ERKEHRNISHFQGS
Trigger: GCTTCCTTGAAAGTGACTGATGTTCCGGTGTTCCTTTCTTTCCCATTGGGTCTTGGACACCTGATTGTTACCATGGTGTTTGTCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 90 bp AGTAATGCCTTGTCCTCACTGGAGAAGTATTTAAGCTTTACCAAGTaGACCAAGCACTGCACTAGGCCCTGTATATGGTGTTCACCGCAA +
Preference number: 1 (lower is better)
Translates to: SNALSSLEKYLSFTK*TKHCTRPCIWCSPQ
Trigger: TTGCGGTGAACACCATATACAGGGCCTAGTGCAGTGCTTGGTGCACTTGGTAAAGCTTAAATACTTCTCCAGTGAGGACAAGGCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp GAAAGGAACACCGGAACATCAGTCACTTTCAAGGAAGCAGGCTCCTaGACAAGTATGACTGAAATTGTTACCCAGGCTATTATCACCTCC +
Preference number: 1 (lower is better)
Translates to: ERNTGTSVTFKEAGS*TSMTEIVTQAIITS
Trigger: GGAGGTGATAATAGCCTGGGTAACAATTTCAGTCATACTTGTCCAGGAGCCTGCTTCCTTGAAAGTGACTGATGTTCCGGTGTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp TGGAAGGTAATGAGGAGCTCACGAAATGGACAGACAGGGAAGCTATaGGTGTTTGAGTCAGAAGGAAATCATCTCCACGGAATTACACTC +
Preference number: 1 (lower is better)
Translates to: WKVMRSSRNGQTGKL*VFESEGNHLHGITL
Trigger: GAGTGTAATTCCGTGGAGATGATTTCCTTCTGACTCAAACACCCATAGCTTCCCTGTCTGTCCATTTCGTGAGCTCCTCATTACCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp CACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTaGTGGTCACACCTTCTCATTCATCATGGCTACTTCCTCCTCTTC +
Preference number: 1 (lower is better)
Translates to: HLASKTQRTLDILLM*WSHLLIHHGYFLLF
Trigger: GAAGAGGAGGAAGTAGCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp TTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTaGTGTGGTGGTCACACCTTCTCATTCATCATGGCTACTTCCTCC +
Preference number: 1 (lower is better)
Translates to: FFTWLLRHNVLLISC*CGGHTFSFIMATSS
Trigger: GGAGGAAGTAGCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp AGTATGACTGAAATTGTTACCCAGGCTATTATCACCTCCCATGGCTaGCGTGAACAAGAAAACATGGCTTACACACGCAATGGCACTTTT +
Preference number: 1 (lower is better)
Translates to: SMTEIVTQAIITSHG*REQENMAYTRNGTF
Trigger: AAAAGTGCCATTGCGTGTGTAAGCCATGTTTTCTTGTTCACGCCAGCCATGGGAGGTGATAATAGCCTGGGTAACAATTTCAGTCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp TTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGTaGTCACACCTTCTCATTCATCATGGCTACTTCCTCCTCTTCTTC +
Preference number: 1 (lower is better)
Translates to: LASKTQRTLDILLMW*SHLLIHHGYFLLFF
Trigger: GAAGAAGAGGAGGAAGTAGCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp GAAGAAACAGCACAAATAATAGCAGGAAGGTGGGAAACAGGGAGATaGAAAGGTTCAGTTGAACTGGAGTGCCAGATATACACAGAAGCA +
Preference number: 1 (lower is better)
Translates to: EETAQIIAGRWETGR*KGSVELECQIYTEA
Trigger: TGCTTCTGTGTATATCTGGCACTCCAGTTCAACTGAACCTTTCCATCTCCCTGTTTCCCACCTTCCTGCTATTATTTGTGCTGTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 90 bp AACCAATACTGCAATCATGATCTTTTCCATCAAACCTGCTCTACCTaGAATCTTTGCTACCTCAGTTCATGGCTTCTAGTTGTTCGGGCT +
Preference number: 1 (lower is better)
Translates to: NQYCNHDLFHQTCST*NLCYLSSWLLVVRA
Trigger: AGCCCGAACAACTAGAAGCCATGAACTGAGGTAGCAAAGATTGCAGGTAGAGCAGGTTTGATGGAAAAGATCATGATTGCAGTATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp TTCCATCAAACCTGCTCTACCTGCAATCTTTGCTACCTCAGTTCATaGCTTCTAGTTGTTCGGGCTGAAAACCTTGTCATTACCCTTAAT +
Preference number: 1 (lower is better)
Translates to: FHQTCSTCNLCYLSS*LLVVRAENLVITLN
Trigger: ATTAAGGGTAATGACAAGGTTTTCAGCCCGAACAACTAGAAGCCATGAACTGAGGTAGCAAAGATTGCAGGTAGAGCAGGTTTGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp TTCAGAGAACAAGGTATGAACATGCCAGGGAAAAGCAGCAGGATCTaGCAATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATC +
Preference number: 1 (lower is better)
Translates to: FREQGMNMPGKSSRI*QWIRHNKQKKVSRI
Trigger: GATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATTGTCAGATCCTGCTGCTTTTCCCTGGCATGTTCATACCTTGTTCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 90 bp CAATTCCAAATTTGCATATCCAACTGCCTGCCTGCCATTTCTACTTaGATGTCTGACATGTCAACCCTAACACTCAATACTGCAACCAAT +
Preference number: 1 (lower is better)
Translates to: QFQICISNCLPAIST*MSDMSTLTLNTATN
Trigger: ATTGGTTGCAGTATTGAGTGTTAGGGTTGACATGTCAGACATCCAAGTAGAAATGGCAGGCAGGCAGTTGGATATGCAAATTTGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp GTTGCATGGCTAGACATTCACAAGTCACTTGATTCAACAGAGATCTaGAGGTCTAAGATGAAGAAAGCCATTTCACACAACAAATGGCCT +
Preference number: 1 (lower is better)
Translates to: VAWLDIHKSLDSTEI*RSKMKKAISHNKWP
Trigger: AGGCCATTTGTTGTGTGAAATGGCTTTCTTCATCTTAGACCTTCAGATCTCTGTTGAATCAAGTGACTTGTGAATGTCTAGCCATGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 90 bp CAATACTGCAACCAATACTGCAATCATGATCTTTTCCATCAAACCTaGTCTACCTGCAATCTTTGCTACCTCAGTTCATGGCTTCTAGTT +
Preference number: 1 (lower is better)
Translates to: QYCNQYCNHDLFHQT*STCNLCYLSSWLLV
Trigger: AACTAGAAGCCATGAACTGAGGTAGCAAAGATTGCAGGTAGAGCAGGTTTGATGGAAAAGATCATGATTGCAGTATTGGTTGCAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp ACACTTATCTTACCCACACCATCACCCATGGGCCATCTCAGTCTCTaGTGCGTAGTTTTCCATGCTAGATTTTATCACATATTACTTTAT +
Preference number: 1 (lower is better)
Translates to: TLILPTPSPMGHLSL*CVVFHARFYHILLY
Trigger: ATAAAGTAATATGTGATAAAATCTAGCATGGAAAACTACGCATCAGAGACTGAGATGGCCCATGGGTGATGGTGTGGGTAAGATAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp AGCAATTCCAACACTTCAAGGAGAAAGTGGCATTTTGGTGAGAATTaGAGGTGTGGAATTAACAGGCAACAATTATTAGGAAAGTGGCGT +
Preference number: 1 (lower is better)
Translates to: SNSNTSRRKWHFGEN*RCGINRQQLLGKWR
Trigger: ACGCCACTTTCCTAATAATTGTTGCCTGTTAATTCCACACCTTCAATTCTCACCAAAATGCCACTTTCTCCTTGAAGTGTTGGAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 90 bp CGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATaGAAAATAAGTCACCTCAAGATTCAGGGCATCAAAAATGGTTAT +
Preference number: 1 (lower is better)
Translates to: RYNPQPLLLVYPYPL*KISHLKIQGIKNGY
Trigger: ATAACCATTTTTGATGCCCTGAATCTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR GCA 90 bp ACTGGTGCAGTGCTTATACAGTGGCCATTACTACTAGAATTCGTTTaGATTTTGCTTGTCTTATTTATGTCCCCTTTGGGCCAATCTAAT +
Preference number: 1 (lower is better)
Translates to: TGAVLIQWPLLLEFV*ILLVLFMSPLGQSN
Trigger: ATTAGATTGGCCCAAAGGGGACATAAATAAGACAAGCAAAATGCAAACGAATTCTAGTAGTAATGGCCACTGTATAAGCACTGCACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 90 bp ATTTCCAATAATGATTTCTCTCAATTCCAAATTTGCATATCCAACTaGCTGCCTGCCATTTCTACTTGGATGTCTGACATGTCAACCCTA +
Preference number: 1 (lower is better)
Translates to: ISNNDFSQFQICISN*LPAISTWMSDMSTL
Trigger: TAGGGTTGACATGTCAGACATCCAAGTAGAAATGGCAGGCAGGCAGTTGGATATGCAAATTTGGAATTGAGAGAAATCATTATTGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 90 bp ACATTCACAAGTCACTTGATTCAACAGAGATCTGAAGGTCTAAGATaGAGAAAGCCATTTCACACAACAAATGGCCTTCAGAAAAAGACT +
Preference number: 1 (lower is better)
Translates to: TFTSHLIQQRSEGLR*RKPFHTTNGLQKKT
Trigger: AGTCTTTTTCTGAAGGCCATTTGTTGTGTGAAATGGCTTTCTTCATCTTAGACCTTCAGATCTCTGTTGAATCAAGTGACTTGTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCTGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGT +
Preference number: 2 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLCLTRH*PEGSHR
Trigger: ACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCA...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR-3UTR TCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACAGAGGCTGTGGAATGTaGGGTGGCGGTGGCTGCGTT +
Preference number: 2 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHRGCGM*GGGGCV
Trigger: AACGCAGCCACCGCCACCTCACATTCCACAGCCTCT...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR-3UTR TCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCACTCATGAAAGGAAACTaGGGACGGCAGAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: DPLTSARNASRWDYRHTPLMKGN*GRQRQA
Trigger: TGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAG...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCAACTCCTGACCTCAGGTaGTCCAGCCTGAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: DPLTSARNASRWDYRHTPTPDLR*SSLRNA
Trigger: GGCATTTCTCAGGCTGGATCACCTGAGGTCAGGAGT...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCTAGTCTCGAACTCCTaGCCTCAGGTGATCCAGCCT +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVLVSNS*PQVIQP
Trigger: AGGCTGGATCACCTGAGGTCAGGAGTTCGAGACTAG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCACCTGCGAGCAGAATTTaGAACATCCGATCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: DPLTSARNASRWDYRHTPPASRI*NIRSPP
Trigger: AGGAGGAGATCGGATGTTTCAAATTCTGCTCGCAGG...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGTGAACCACCGTGTCTaGCCAAGCCACTGTCTTAAG +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVVNHRV*PSHCLK
Trigger: CTTAAGACAGTGGCTTGGCCAGACACGGTGGTTCAC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGCACACAGAGCTCAGTaGGTTTTCAGTGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVAHRAQ*VFSAAQ
Trigger: CTGAGCAGCACTGAAAACCCACTGAGCTCTGTGTGC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp TCAGTCACTTTGGAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCTGCTGCGAGAGGCTGTaGAATGTGAGGTGGCGGTGG +
Preference number: 2 (lower is better)
Translates to: SVTLEAGSLGETVWTLKFCCERL*NVRWRW
Trigger: CCACCGCCACCTCACATTCCACAGCCTCTCGCAGCA...GAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR-3UTR TCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACTGCGGAATAAAGCAGTaGCTGCTCCAAGGCCTGATG +
Preference number: 2 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHCGIKQ*LLQGLM
Trigger: CATCAGGCCTTGGAGCAGTCACTGCTTTATTCCGCA...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp AGGGAACGTTTGCAAGGAGCAGCCTCTAACACCCGACATAGTTTTTaGAGTGCATCTCAACTGCCCACCCGGAGATTAAGATGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: RERLQGAASNTRHSF*SASQLPTRRLRCPL
Trigger: CAGAGGGCATCTTAATCTCCGGGTGGGCAGTTGAGATGCACTCAAAAAACTATGTCGGGTGTTAGAGGCTGCTCCTTGCAAACGTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCTCATCTCGAACTCCTaGACTCAAGCAATCTTCTCG +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVLISNS*TQAIFS
Trigger: CGAGAAGATTGCTTGAGTTCAGGAGTTCGAGATGAG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACGGGCCATTTTTACTTTaGGGTCTTAACAGAGCTTGT +
Preference number: 2 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHGPFLL*GLNRAC
Trigger: ACAAGCTCTGTTAAGACCTCAAAGTAAAAATGGCCC...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR-3UTR GCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACTTCTTCTTTTCTCTATaGCGGTATAACCCACAACCC +
Preference number: 2 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHFFFSL*RYNPQP
Trigger: GGGTTGTGGGTTATACCGGCATAGAGAAAAGAAGAA...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCGAAACACACACACTTaGCTAAAGTCACATACGGCA +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVRNTHT*LKSHTA
Trigger: TGCCGTATGTGACTTTAGGCAAGTGTGTGTGTTTCG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCAAATCCTCCTCCTTTCTaGGGTCTCAATTTATCTCAG +
Preference number: 2 (lower is better)
Translates to: DPLTSARNASRWDYRHTPNPPPF*GLNLSQ
Trigger: CTGAGATAAATTGAGACCCCAGAAAGGAGGAGGATT...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp CCACGTTGCCAAACACAAAGGGCATTTCTCAGGCTGCCTCTTAACTaGACCTGCGAGCAGAATTTGAAACATCCGATCTCCTCCTCACTT +
Preference number: 2 (lower is better)
Translates to: PRCQTQRAFLRLPLN*TCEQNLKHPISSSL
Trigger: AAGTGAGGAGGAGATCGGATGTTTCAAATTCTGCTCGCAGGTCAAGTTAAGAGGCAGCCTGAGAAATGCCCTTTGTGTTTGGCAACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACCAGGACATGAATAGGTaGGCAGACATACTGGTTCAA +
Preference number: 2 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHQDMNR*ADILVQ
Trigger: TTGAACCAGTATGTCTGCTCACCTATTCATGTCCTG...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCTGGACAAGTATGACTaGAATTGTTACCCAGGCTAT +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVLDKYD*NCYPGY
Trigger: ATAGCCTGGGTAACAATTTCAGTCATACTTGTCCAG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGAAACACCTGTGCATTTaGAGAAGTCAAGCCAACTTG +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVKHLCI*RSQANL
Trigger: CAAGTTGGCTTGACTTCTTCAAATGCACAGGTGTTT...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp CACCGTGTCTGGCCAAGCCACTGTCTTAAGAAGAAAAGACTACTTTaGCTACTAGCAACCGTCACCTTTCTCCAGTCCTCTTGCAGCAAA +
Preference number: 2 (lower is better)
Translates to: HRVWPSHCLKKKRLL*LLATVTFLQSSCSK
Trigger: TTTGCTGCAAGAGGACTGGAGAAAGGTGACGGTTGCTAGTAGCAAAAGTAGTCTTTTCTTCTTAAGACAGTGGCTTGGCCAGACACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGTCTCAATTCCAAATTTaGATATCCAACTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVSQFQI*ISNCLP
Trigger: AGGCAGGCAGTTGGATATGCAAATTTGGAATTGAGA...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGTGGGTTTTCAGTGCTaGTCAGAATATCCTAAATGT +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVVGFQC*SEYPKC
Trigger: ACATTTAGGATATTCTGAGCAGCACTGAAAACCCAC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCACAACCCTTACTGTTaGTCTATCCATATCCTCTAT +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVHNPYC*SIHILY
Trigger: ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGT +
Preference number: 2 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLCLTRH*PEGSHR
Trigger: ACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR-3UTR TCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGATTCAACAGAGATCTaGAGGTCTAAGATGAAGAAA +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVDSTEI*RSKMKK
Trigger: TTTCTTCATCTTAGACCTTCAGATCTCTGTTGAATC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGAATACCAATTCTTTTaGAGCTGTTCTGTAACAGCT +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVEYQFF*SCSVTA
Trigger: AGCTGTTACAGAACAGCTTCAAAAGAATTGGTATTC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGAAGTTCTGTATATTGTaGTCAGCTCCATGCAAATAC +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVKFCIL*SAPCKY
Trigger: GTATTTGCATGGAGCTGAGCACAATATACAGAACTT...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGTTTTCCTTTTCAGTTaGCAGAAAGCTCAGAGTTTA +
Preference number: 2 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVVFLFS*QKAQSL
Trigger: TAAACTCTGAGCTTTCTGGCAACTGAAAAGGAAAAC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRDLEVP*LDLGKR
Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR CAA 90 bp CATTCATCATGGCTACTTCCTCCTCTTCTTCCAAAGCTCTTAATATaGGAGCGCCCCAGGGCTCATTCCATGGTTCTCTTTTCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: HSSWLLPPLLPKLLI*ERPRAHSMVLFSSF
Trigger: GAAAGAAGAAAAGAGAACCATGGAATGAGCCCTGGGGCGCTCCAATATTAAGAGCTTTGGAAGAAGAGGAGGAAGTAGCCATGATGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp TCAGTCACTTTGGAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCGGGCCATTTTTACTTTaGGGTCTTAACAGAGCTTGT +
Preference number: 2 (lower is better)
Translates to: SVTLEAGSLGETVWTLKFGPFLL*GLNRAC
Trigger: ACAAGCTCTGTTAAGACCTCAAAGTAAAAATGGCCC...GAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR-3UTR TCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTATTGCCTCAGCTTCCTaGATAGCTGGGACTACAGGC +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFIASAS*IAGTTG
Trigger: GCCTGTAGTCCCAGCTATTCAGGAAGCTGAGGCAAT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTTTGCCCAGGCTGGAGTaGAGTGACACTCAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPLPRLE*SDTQGS
Trigger: TGAGCCCTGAGTGTCACTGCACTCCAGCCTGGGCAA...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACTCTAGTTGTTCGGGCTaGAAACCTTGTCATTACCCT +
Preference number: 2 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHSSCSG*KPCHYP
Trigger: AGGGTAATGACAAGGTTTTCAGCCCGAACAACTAGA...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTGGTGAGCAGACATACTaGTTCAAAGTCATTCCCGGC +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFGEQTY*FKVIPG
Trigger: GCCGGGAATGACTTTGAACCAGTATGTCTGCTCACC...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTAGACGGAAAGCGTGTTTaGATTCTGAAGGACCGGGGG +
Preference number: 2 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLDGKRV*ILKDRG
Trigger: CCCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTC...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR CAA 90 bp GTCATTCAGCTTTTCAGGAAAAGGCAACAGATGAAGATGTCTACTTaGATACCTACTCTGCACAATGACAGGAATAGGGTAGTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: VIQLFRKRQQMKMST*IPTLHNDRNRVVQE
Trigger: CTCCTGGACTACCCTATTCCTGTCATTGTGCAGAGTAGGTATCAAAGTAGACATCTTCATCTGTTGCCTTTTCCTGAAAAGCTGAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTaGATGTGGTGGTCACACCTTCTCATTCATCATGGCTACTTCCTC +
Preference number: 2 (lower is better)
Translates to: FLHLASKTQRTLDIL*MWWSHLLIHHGYFL
Trigger: GAGGAAGTAGCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTAATCATGGAGCACTGTaGGCAGCCCAGATGATCCAC +
Preference number: 2 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPNHGAL*AAQMIH
Trigger: GTGGATCATCTGGGCTGCTCACAGTGCTCCATGATT...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTTGGCAAGATCACCAATaGCATCTGTACTGTCCACGT +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFWQDHQ*HLYCPR
Trigger: ACGTGGACAGTACAGATGTCATTGGTGATCTTGCCA...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTAAAAGAGCACCAGGTTaGGAGGATTTCCTAGCGGAA +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFKRAPG*EDFLAE
Trigger: TTCCGCTAGGAAATCCTCTCAACCTGGTGCTCTTTT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp TCTATTCTCTCATGCCTTTCACACCTTTCCCCACCTTACTTGCAGTaGCGAATTTTGTTTCCTAGTTTACTGAGACTAAGGCAGAGACTT +
Preference number: 2 (lower is better)
Translates to: SILSCLSHLSPPYLQ*RILFPSLLRLRQRL
Trigger: AAGTCTCTGCCTTAGTCTCAGTAAACTAGGAAACAAAATTCGCAACTGCAAGTAAGGTGGGGAAAGGTGTGAAAGGCATGAGAGAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACGTCACAACAATTTCATaGCTAAGGGCAGTTATGTCT +
Preference number: 2 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHVTTIS*LRAVMS
Trigger: AGACATAACTGCCCTTAGTCATGAAATTGTTGTGAC...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATAGCCCCAACAGGACATaGATAGGTGAGCAGACATAC +
Preference number: 2 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDSPNRT*IGEQTY
Trigger: GTATGTCTGCTCACCTATTCATGTCCTGTTGGGGCT...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTCAAACCTGCTCTACCTaGAATCTTTGCTACCTCAGT +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFQTCST*NLCYLS
Trigger: ACTGAGGTAGCAAAGATTGCAGGTAGAGCAGGTTTG...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp CACTTTTCTCTAATGTGGGAAGTTCACACATTCTACAGTAATGCCTaGTCCTCACTGGAGAAGTATTTAAGCTTTACCAAGTGCACCAAG +
Preference number: 2 (lower is better)
Translates to: HFSLMWEVHTFYSNA*SSLEKYLSFTKCTK
Trigger: CTTGGTGCACTTGGTAAAGCTTAAATACTTCTCCAGTGAGGACAAGGCATTACTGTAGAATGTGTGAACTTCCCACATTAGAGAAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp CAGAATTTGAAACATCCGATCTCCTCCTCACTTCATTTTCTTCACTaGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: QNLKHPISSSLHFLH*ASKTQRTLDILLMW
Trigger: CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAAATGAAGTGAGGAGGAGATCGGATGTTTCAAATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTATACCTAATGCTAAATaGCGAGTTAATGGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFIPNAK*RVNGCS
Trigger: GCTGCACCCATTAACTCGTCATTTAGCATTAGGTAT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTAGTCAAGCCAACTTGTaGCCTAGCTTCCATCTCATC +
Preference number: 2 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPSQANL*PSFHLI
Trigger: GATGAGATGGAAGCTAGGGCACAAGTTGGCTTGACT...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTTTGAGACCAAAGAGTTaGTGCGAGAGGCTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFLRPKS*CERLWN
Trigger: ATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAA...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR-3UTR CCA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATATCACCTCCCATGGCTaGCGTGAACAAGAAAACATG +
Preference number: 2 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDITSHG*REQENM
Trigger: CATGTTTTCTTGTTCACGCCAGCCATGGGAGGTGAT...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTACACAGCTACATATTTaGAGCAGCATCAACAAGACC +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFTQLHI*SSINKT
Trigger: GGTCTTGTTGATGCTGCTCCAAATATGTAGCTGTGT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTCCAGGGCTCATTCCATaGTTCTCTTTTCTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFPGLIP*FSFLLS
Trigger: TGAAAGAAGAAAAGAGAACCATGGAATGAGCCCTGG...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp ACCGTGAGCATGACGTATGTAGAAGTCAAAAAGAAACAGACGCCATaGGGACCAAAGGCCCTATTTGGAAATAATAATAAATGTTTCCAC +
Preference number: 2 (lower is better)
Translates to: TVSMTYVEVKKKQTP*GPKALFGNNNKCFH
Trigger: GTGGAAACATTTATTATTATTTCCAAATAGGGCCTTTGGTCCCAATGGCGTCTGTTTCTTTTTGACTTCTACATACGTCATGCTCACGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTAGGAAGTACGTGAGCTaGTGTTGCATGGCTAGACAT +
Preference number: 2 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSRKYVS*CCMARH
Trigger: ATGTCTAGCCATGCAACAGCAGCTCACGTACTTCCT...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTCTGACTCTGGACAAGTaGCTAAGTCTGCTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSLTLDK*LSLLPN
Trigger: GTTTGGAAGCAGACTTAGCCACTTGTCCAGAGTCAG...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 90 bp GCAGTGCTTATACAGTGGCCATTACTACTAGAATTCGTTTGCATTTaGCTTGTCTTATTTATGTCCCCTTTGGGCCAATCTAATCAACAA +
Preference number: 2 (lower is better)
Translates to: AVLIQWPLLLEFVCI*LVLFMSPLGQSNQQ
Trigger: TTGTTGATTAGATTGGCCCAAAGGGGACATAAATAAGACAAGCAAAATGCAAACGAATTCTAGTAGTAATGGCCACTGTATAAGCACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGCTTACAGAAAATTCCTaGACTGCAACTAGAAGTGAA +
Preference number: 2 (lower is better)
Translates to: FLHLASKTQRTLDILLMWLTENS*TATRSE
Trigger: TTCACTTCTAGTTGCAGTTCAGGAATTTTCTGTAAG...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTTCAAATGTCAGGGCTTaGAATCTTTCAGGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPSNVRA*NLSGKL
Trigger: CAACTTCCCTGAAAGATTTCAAGCCCTGACATTTGA...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTTTCTTCTTTTCTCTATaGCGGTATAACCCACAACCC +
Preference number: 2 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPFFFSL*RYNPQP
Trigger: GGGTTGTGGGTTATACCGGCATAGAGAAAAGAAGAA...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTTACGTGAGCTGCTGTTaGATGGCTAGACATTCACAA +
Preference number: 2 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSYVSCC*MARHSQ
Trigger: TTGTGAATGTCTAGCCATGCAACAGCAGCTCACGTA...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATCATCACACAAGGGCTaGACCAAACAAAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLSSHKG*TKQNEK
Trigger: TTTCTCATTTTGTTTGGTTCAGCCCTTGTGTGATGA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGGGATGCTCTTTCTATaGTCAGTTGTAAGTAGTAAG +
Preference number: 2 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNGMLFL*SVVSSK
Trigger: CTTACTACTTACAACTGATCATAGAAAGAGCATCCC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR-3UTR CCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTCACAACCCTTACTGTTaGTCTATCCATATCCTCTAT +
Preference number: 2 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFHNPYC*SIHILY
Trigger: ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTG...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR-3UTR CCA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTGCAACCTGGTATATTTaGCTGGATTACTCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSATWYI*LDYSSY
Trigger: GTAGCTAGAGTAATCCAGCCAAATATACCAGGTTGC...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTACCACTTTAATCTGGTaGTATGTTTGTGATCACATT +
Preference number: 2 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFTTLIW*YVCDHI
Trigger: AATGTGATCACAAACATACCACCAGATTAAAGTGGT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATTGCAAATACTAAAGTaGACATGCAATGTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLLQILK*TCNVEA
Trigger: AGCTTCCACATTGCATGTTCACTTTAGTATTTGCAA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTTATGGACTAAACTTCTaGACACTGAGATCTGGTATT +
Preference number: 2 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPYGLNF*TLRSGI
Trigger: AATACCAGATCTCAGTGTTCAGAAGTTTAGTCCATA...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR GCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTCCTCTTGCAGCAAAATaGCTCAAAAAGAGTTCTATT +
Preference number: 2 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPPLAAK*LKKSSI
Trigger: AATAGAACTCTTTTTGAGGCATTTTGCTGCAAGAGG...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTAGTACTTACTCAAACTaGTCTATAATTCAACGTCGG +
Preference number: 2 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFSTYSN*SIIQRR
Trigger: CCGACGTTGAATTATAGACCAGTTTGAGTAAGTACT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR TCA 72 bp CAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGTCCAAGTCTACTAGGT +
Preference number: 3 (lower is better)
Translates to: QAGSVRFCLTRH*PEGSHRPSLLG
Trigger: ACCTAGTAGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR-3UTR CAA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACGTGGCGGTGGCTGCGTaGGTAGGACGGAAAGCGTGT +
Preference number: 3 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHVAVAA*VGRKAC
Trigger: ACACGCTTTCCGTCCTACCAACGCAGCCACCGCCAC...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR-3UTR CAA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGACCACTAGAGCAAGCTaGTCCAACCCACAGCCCACG +
Preference number: 3 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVTTRAS*SNPQPT
Trigger: CGTGGGCTGTGGGTTGGACAAGCTTGCTCTAGTGGT...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACTGGAAGCTGGTTCTCTaGGAGAGACAGTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHWKLVL*ERQSGP
Trigger: AGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCA...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR GCA 72 bp AGTGAGAAGCCAACAGTTACAGCTTCGTTGCTAACGTaGCCCATGGGCCAGGCAAATCCTCCTCCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: SEKPTVTASLLT*PMGQANPPPFW
Trigger: CCAGAAAGGAGGAGGATTTGCCTGGCCCATGGGGCACGTTAGCAACGAAGCTGTAACTGTTGGCTTCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp GGTAGTCCAGGAGAGCCCCAACAGGACATGAATAGGTaGGCAGACATACTGGTTCAAAGTCATTCCCGGCTG +
Preference number: 3 (lower is better)
Translates to: GSPGEPQQDMNR*ADILVQSHSRL
Trigger: CAGCCGGGAATGACTTTGAACCAGTATGTCTGCTCACCTATTCATGTCCTGTTGGGGCTCTCCTGGACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp GTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTaGGTCATGGAAGGTAATGAGGAGCTCACGAAATGG +
Preference number: 3 (lower is better)
Translates to: VEAREAPCHMEK*VMEGNEELTKW
Trigger: CCATTTCGTGAGCTCCTCATTACCTTCCATGACTCACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp CGTTGGCATGGGAAGGGAGAAGGGAATCCAGTGTTTTaGGGTCACCAAGGCTTGTGTGATGGGAAAGATGAG +
Preference number: 3 (lower is better)
Translates to: RWHGKGEGNPVF*GHQGLCDGKDE
Trigger: CTCATCTTTCCCATCACACAAGCCTTGGTGACCCCAAAACACTGGATTCCCTTCTCCCTTCCCATGCCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGACCAATAGGGAACGTTaGCAAGGAGCAGCCTCTAAC +
Preference number: 3 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVTNRER*QGAASN
Trigger: GTTAGAGGCTGCTCCTTGCAAACGTTCCCTATTGGT...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp CCACTCCATCAGAACAGGCCCTGGCAAGATCACCAATaGCATCTGTACTGTCCACGTTGCCAAACACAAAGG +
Preference number: 3 (lower is better)
Translates to: PLHQNRPWQDHQ*HLYCPRCQTQR
Trigger: CCTTTGTGTTTGGCAACGTGGACAGTACAGATGTCATTGGTGATCTTGCCAGGGCCTGTTCTGATGGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp CCAGGGAGGCTCCGTGTCACATGGAAAAGTGAGTCATaGAAGGTAATGAGGAGCTCACGAAATGGACAGACA +
Preference number: 3 (lower is better)
Translates to: PGRLRVTWKSES*KVMRSSRNGQT
Trigger: TGTCTGTCCATTTCGTGAGCTCCTCATTACCTTCCATGACTCACTTTTCCATGTGACACGGAGCCTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACCCACTCCCTAGATTCTaGGTTTACCAGCTTATAAAG +
Preference number: 3 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHPLPRF*VYQLIK
Trigger: CTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGG...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGGACGGAAAGCGTGTTaGGATTCTGAAGGACCGGGG +
Preference number: 3 (lower is better)
Translates to: LYAGITHNPYCWSIHILYGRKAC*DSEGPG
Trigger: CCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTCC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR TCA 72 bp TGTTACCCAGGCTATTATCACCTCCCATGGCTGGCGTaGACAAGAAAACATGGCTTACACACGCAATGGCAC +
Preference number: 3 (lower is better)
Translates to: CYPGYYHLPWLA*TRKHGLHTQWH
Trigger: GTGCCATTGCGTGTGTAAGCCATGTTTTCTTGTTCACGCCAGCCATGGGAGGTGATAATAGCCTGGGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp CCTGTGTGCTGCATGTCGTACACTGAAGACACCAATTaGCCCAACTCCATCAGGTCAAAGCTTCTCCACATG +
Preference number: 3 (lower is better)
Translates to: PVCCMSYTEDTN*PNSIRSKLLHM
Trigger: CATGTGGAGAAGCTTTGACCTGATGGAGTTGGGTCAATTGGTGTCTTCAGTGTACGACATGCAGCACACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp AGACTCGTAAAATCCTCGCTTCTCCATGGTAAAGGTTaGGACCAAAGAGTTGCTGCGAGAGGCTGTGGAATG +
Preference number: 3 (lower is better)
Translates to: RLVKSSLLHGKG*DQRVAARGCGM
Trigger: CATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAACCTTTACCATGGAGAAGCGAGGATTTTACGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR GCA 72 bp CAAAGGGCATTTCTCAGGCTGCCTCTTAACTTGACCTaGGAGCAGAATTTGAAACATCCGATCTCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: QRAFLRLPLNLT*EQNLKHPISSS
Trigger: TGAGGAGGAGATCGGATGTTTCAAATTCTGCTCGCAGGTCAAGTTAAGAGGCAGCCTGAGAAATGCCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp ATGAGGAGCTCACGAAATGGACAGACAGGGAAGCTATaGGTGTTTGAGTCAGAAGGAAATCATCTCCACGGA +
Preference number: 3 (lower is better)
Translates to: MRSSRNGQTGKL*VFESEGNHLHG
Trigger: TCCGTGGAGATGATTTCCTTCTGACTCAAACACCCATAGCTTCCCTGTCTGTCCATTTCGTGAGCTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCTTCATTTTCTTCACTaGGCTTCTAAGACACAACGT +
Preference number: 3 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVLHFLH*ASKTQR
Trigger: ACGTTGTGTCTTAGAAGCCAAGTGAAGAAAATGAAG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCAATGTTTGTGATCACATaGCTTCCAGGTAAAAATCAG +
Preference number: 3 (lower is better)
Translates to: DPLTSARNASRWDYRHTPMFVIT*LPGKNQ
Trigger: CTGATTTTTACCTGGAAGCAATGTGATCACAAACAT...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCATCGTTTGCATTTTGCTaGTCTTATTTATGTCCCCTT +
Preference number: 3 (lower is better)
Translates to: DPLTSARNASRWDYRHTPSFAFC*SYLCPL
Trigger: AAGGGGACATAAATAAGACAAGCAAAATGCAAACGA...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGATAGCACCGAATACTTaGAAGACTCCCACATTTTTA +
Preference number: 3 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVIAPNT*KTPTFL
Trigger: TAAAAATGTGGGAGTCTTCAAAGTATTCGGTGCTAT...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp AGGAATAGGGTAGTCCAGGAGAGCCCCAACAGGACATaGATAGGTGAGCAGACATACTGGTTCAAAGTCATT +
Preference number: 3 (lower is better)
Translates to: RNRVVQESPNRT*IGEQTYWFKVI
Trigger: AATGACTTTGAACCAGTATGTCTGCTCACCTATTCATGTCCTGTTGGGGCTCTCCTGGACTACCCTATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp CACTTTCAAGGAAGCAGGCTCCTGGACAAGTATGACTaGAATTGTTACCCAGGCTATTATCACCTCCCATGG +
Preference number: 3 (lower is better)
Translates to: HFQGSRLLDKYD*NCYPGYYHLPW
Trigger: CCATGGGAGGTGATAATAGCCTGGGTAACAATTTCAGTCATACTTGTCCAGGAGCCTGCTTCCTTGAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp GGAGGGATAGCATTAGGAGATATACCTAATGCTAAATaGCGAGTTAATGGGTGCAGCACACCAGCATGGCAC +
Preference number: 3 (lower is better)
Translates to: GGIALGDIPNAK*RVNGCSTPAWH
Trigger: GTGCCATGCTGGTGTGCTGCACCCATTAACTCGTCATTTAGCATTAGGTATATCTCCTAATGCTATCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 72 bp TTGTCCTCACTGGAGAAGTATTTAAGCTTTACCAAGTaGACCAAGCACTGCACTAGGCCCTGTATATGGTGT +
Preference number: 3 (lower is better)
Translates to: LSSLEKYLSFTK*TKHCTRPCIWC
Trigger: ACACCATATACAGGGCCTAGTGCAGTGCTTGGTGCACTTGGTAAAGCTTAAATACTTCTCCAGTGAGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp GAAATTGTTACCCAGGCTATTATCACCTCCCATGGCTaGCGTGAACAAGAAAACATGGCTTACACACGCAAT +
Preference number: 3 (lower is better)
Translates to: EIVTQAIITSHG*REQENMAYTRN
Trigger: ATTGCGTGTGTAAGCCATGTTTTCTTGTTCACGCCAGCCATGGGAGGTGATAATAGCCTGGGTAACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp ACCGGAACATCAGTCACTTTCAAGGAAGCAGGCTCCTaGACAAGTATGACTGAAATTGTTACCCAGGCTATT +
Preference number: 3 (lower is better)
Translates to: TGTSVTFKEAGS*TSMTEIVTQAI
Trigger: AATAGCCTGGGTAACAATTTCAGTCATACTTGTCCAGGAGCCTGCTTCCTTGAAAGTGACTGATGTTCCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp CTCAAGTGTTCCAATTGCCTCAGCTTCCTGAATAGCTaGGACTACAGGCGTGTGGGTCTACATTATTTCTTA +
Preference number: 3 (lower is better)
Translates to: LKCSNCLSFLNS*DYRRVGLHYFL
Trigger: TAAGAAATAATGTAGACCCACACGCCTGTAGTCCCAGCTATTCAGGAAGCTGAGGCAATTGGAACACTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp GCACAAATAATAGCAGGAAGGTGGGAAACAGGGAGATaGAAAGGTTCAGTTGAACTGGAGTGCCAGATATAC +
Preference number: 3 (lower is better)
Translates to: AQIIAGRWETGR*KGSVELECQIY
Trigger: GTATATCTGGCACTCCAGTTCAACTGAACCTTTCCATCTCCCTGTTTCCCACCTTCCTGCTATTATTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp TACTTTGAGGTCTTAACAGAGCTTGTTCAGTCACTTTaGAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: YFEVLTELVQSL*KLVLLERQSGP
Trigger: AGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGCTCTGTTAAGACCTCAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR-3UTR CAA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTCCGAAACACACACACTaGCCTAAAGTCACATACGGC +
Preference number: 3 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFPKHTH*PKVTYG
Trigger: GCCGTATGTGACTTTAGGCAAGTGTGTGTGTTTCGG...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp TTACCCACACCATCACCCATGGGCCATCTCAGTCTCTaGTGCGTAGTTTTCCATGCTAGATTTTATCACATA +
Preference number: 3 (lower is better)
Translates to: LPTPSPMGHLSL*CVVFHARFYHI
Trigger: TATGTGATAAAATCTAGCATGGAAAACTACGCATCAGAGACTGAGATGGCCCATGGGTGATGGTGTGGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp TGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTaGTGTGGTGGTCACACCTTCTCATTCATCATGGCT +
Preference number: 3 (lower is better)
Translates to: WLLRHNVLLISC*CGGHTFSFIMA
Trigger: AGCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp TTATCACCTCCCATGGCTGGCGTGAACAAGAAAACATaGCTTACACACGCAATGGCACTTTTGGTAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LSPPMAGVNKKT*LTHAMALLVRK
Trigger: TTTTCTTACCAAAAGTGCCATTGCGTGTGTAAGCCATGTTTTCTTGTTCACGCCAGCCATGGGAGGTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp AAACACCATGGTAACAATCAGGTGTCCAAGACCCAATaGGAAAGAAAGGAACACCGGAACATCAGTCACTTT +
Preference number: 3 (lower is better)
Translates to: KHHGNNQVSKTQ*ERKEHRNISHF
Trigger: AAAGTGACTGATGTTCCGGTGTTCCTTTCTTTCCCATTGGGTCTTGGACACCTGATTGTTACCATGGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp AAGACACAACGTACTCTTGATATCCTGTTGATGTGGTaGTCACACCTTCTCATTCATCATGGCTACTTCCTC +
Preference number: 3 (lower is better)
Translates to: KTQRTLDILLMW*SHLLIHHGYFL
Trigger: GAGGAAGTAGCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACCCACTCCCTAGATTCTaGGTTTACCAGCTTATAAAG +
Preference number: 3 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHPLPRF*VYQLIK
Trigger: CTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGG...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGGCTTGTTCAGTCACTTaGGAAGCTGGTTCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKACSVT*EAGSLG
Trigger: TCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGC...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR GCA 72 bp ACAGACGTGGAATATTTATCACCAATAGGGAACGTTTaGAAGGAGCAGCCTCTAACACCCGACATAGTTTTT +
Preference number: 3 (lower is better)
Translates to: TDVEYLSPIGNV*KEQPLTPDIVF
Trigger: AAAAACTATGTCGGGTGTTAGAGGCTGCTCCTTGCAAACGTTCCCTATTGGTGATAAATATTCCACGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 72 bp CAACAAAGAGGGGCCTTTGTGATGATGGAACTGTTCTaGATCTTGACTGTATCAGTGTCAGTATCTTGGTTA +
Preference number: 3 (lower is better)
Translates to: QQRGAFVMMELF*ILTVSVSVSWL
Trigger: TAACCAAGATACTGACACTGATACAGTCAAGATGCAGAACAGTTCCATCATCACAAAGGCCCCTCTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp AAGATACATTTCAAGCCTAATCTGACTCTGGACAAGTaGCTAAGTCTGCTTCCAAACCTGCAGAATAGGAGA +
Preference number: 3 (lower is better)
Translates to: KIHFKPNLTLDK*LSLLPNLQNRR
Trigger: TCTCCTATTCTGCAGGTTTGGAAGCAGACTTAGCCACTTGTCCAGAGTCAGATTAGGCTTGAAATGTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp TCTAAGACACAACGTACTCTTGATATCCTGTTGATGTaGTGGTCACACCTTCTCATTCATCATGGCTACTTC +
Preference number: 3 (lower is better)
Translates to: SKTQRTLDILLM*WSHLLIHHGYF
Trigger: GAAGTAGCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 72 bp CCACAACCCTTACTGTTGGTCTATCCATATCCTCTATaGAAAATAAGTCACCTCAAGATTCAGGGCATCAAA +
Preference number: 3 (lower is better)
Translates to: PQPLLLVYPYPL*KISHLKIQGIK
Trigger: TTTGATGCCCTGAATCTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR GCA 72 bp AACCAATACTGCAATCATGATCTTTTCCATCAAACCTaGTCTACCTGCAATCTTTGCTACCTCAGTTCATGG +
Preference number: 3 (lower is better)
Translates to: NQYCNHDLFHQT*STCNLCYLSSW
Trigger: CCATGAACTGAGGTAGCAAAGATTGCAGGTAGAGCAGGTTTGATGGAAAAGATCATGATTGCAGTATTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp AACATCCGATCTCCTCCTCACTTCATTTTCTTCACTTaGCTTCTAAGACACAACGTACTCTTGATATCCTGT +
Preference number: 3 (lower is better)
Translates to: NIRSPPHFIFFT*LLRHNVLLISC
Trigger: ACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAAATGAAGTGAGGAGGAGATCGGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CCA 72 bp TTATTGAACACTGTCATTCATGCACACAGAGCTCAGTaGGTTTTCAGTGCTGCTCAGAATATCCTAAATGTC +
Preference number: 3 (lower is better)
Translates to: LLNTVIHAHRAQ*VFSAAQNILNV
Trigger: GACATTTAGGATATTCTGAGCAGCACTGAAAACCCACTGAGCTCTGTGTGCATGAATGACAGTGTTCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGAGGTATCTCGAATCATaGAAGGCAAGTTGCTTTAAG +
Preference number: 3 (lower is better)
Translates to: FLHLASKTQRTLDILLMWRYLES*KASCFK
Trigger: CTTAAAGCAACTTGCCTTCAATGATTCGAGATACCT...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 72 bp GTGCTTATACAGTGGCCATTACTACTAGAATTCGTTTaGATTTTGCTTGTCTTATTTATGTCCCCTTTGGGC +
Preference number: 3 (lower is better)
Translates to: VLIQWPLLLEFV*ILLVLFMSPLG
Trigger: GCCCAAAGGGGACATAAATAAGACAAGCAAAATGCAAACGAATTCTAGTAGTAATGGCCACTGTATAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGATGAGTTTAGGTATCTaGGTCTGGCAATATTTCATG +
Preference number: 3 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKMSLGI*VWQYFM
Trigger: CATGAAATATTGCCAGACCAAGATACCTAAACTCAT...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR-3UTR CAA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTTTCACTTCCTTTCACTaGCCATATCTGATTCATCGG +
Preference number: 3 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPFTSFH*PYLIHR
Trigger: CCGATGAATCAGATATGGCAAGTGAAAGGAAGTGAA...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp CTAGACATTCACAAGTCACTTGATTCAACAGAGATCTaGAGGTCTAAGATGAAGAAAGCCATTTCACACAAC +
Preference number: 3 (lower is better)
Translates to: LDIHKSLDSTEI*RSKMKKAISHN
Trigger: GTTGTGTGAAATGGCTTTCTTCATCTTAGACCTTCAGATCTCTGTTGAATCAAGTGACTTGTGAATGTCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp ATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATaGGACACTAGGCAAGAAGAAACTTTTATTACAAAA +
Preference number: 3 (lower is better)
Translates to: MPGLRQPLYSDQ*DTRQEETFITK
Trigger: TTTTGTAATAAAAGTTTCTTCTTGCCTAGTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR GCA 72 bp AAGGCTATTCTAGAACTCAACGTTTTCCTTTTCAGTTaGCAGAAAGCTCAGAGTTTAGTTGGTGTTTATATG +
Preference number: 3 (lower is better)
Translates to: KAILELNVFLFS*QKAQSLVGVYM
Trigger: CATATAAACACCAACTAAACTCTGAGCTTTCTGGCAACTGAAAAGGAAAACGTTGAGTTCTAGAATAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR-3UTR CAA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTATGAGTTTAGGTATCTaGGTCTGGCAATATTTCATG +
Preference number: 3 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSMSLGI*VWQYFM
Trigger: CATGAAATATTGCCAGACCAAGATACCTAAACTCAT...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR TCA 72 bp TTTAGTTGGTGTTTATATGTGGTAACCACCTTTCTTTaGTTCCTGATGAAATTCTGTCTATATGGAAGACCA +
Preference number: 3 (lower is better)
Translates to: FSWCLYVVTTFL*FLMKFCLYGRP
Trigger: TGGTCTTCCATATAGACAGAATTTCATCAGGAATCAAAGAAAGGTGGTTACCACATATAAACACCAACTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGAGGCTGTAGTGAGCTaGGATCACGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLEAVVS*DHATAL
Trigger: GAGTGCAGTGGCGTGATCTCAGCTCACTACAGCCTC...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR GCA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCTTGAACATTACACCCTaGTCCAGCGCGGCCGCGTTC +
Preference number: 4 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLLNITP*SSAAAF
Trigger: GAACGCGGCCGCGCTGGAGCAGGGTGTAATGTTCAA...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368989.6
3UTR CAA 72 bp CAAAAGCCAGCAGCATGGGGAACCACTAGAGCAAGCTaGTCCAACCCACAGCCCACGGGCCGCATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QKPAAWGTTRAS*SNPQPTGRMWP
Trigger: GGGCCACATGCGGCCCGTGGGCTGTGGGTTGGACAAGCTTGCTCTAGTGGTTCCCCATGCTGCTGGCTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGAGAGCCCACATACGTaGTGCATTCACCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLESPHT*CIHQLL
Trigger: CAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTC...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR GCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHAGTPL*YNGARD
Trigger: GTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGC...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTTCCACTAGGTCCTGCTaGTCATTGGCTTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RALLPHTSLTGRLASSKSSTRSC*SLACRK
Trigger: CTTCCTACAAGCCAATGATCAGCAGGACCTAGTGGA...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR TCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGGCCCAGGACGGCTTTaGATGCGGCCCAACACAGAT +
Preference number: 4 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVGPGRL*MRPNTD
Trigger: ATCTGTGTTGGGCCGCATTCAAAGCCGTCCTGGGCC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLALIQL*ISSGLS
Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR CAA 72 bp CCACAGCCCACGGGCCGCATGTGGCCCAGGACGGCTTaGAATGCGGCCCAACACAGATTTGTAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: PQPTGRMWPRTA*NAAQHRFVNFL
Trigger: AAGAAAGTTTACAAATCTGTGTTGGGCCGCATTCAAAGCCGTCCTGGGCCACATGCGGCCCGTGGGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp CGAGAGGCTGTGGAATGTGAGGTGGCGGTGGCTGCGTaGGTAGGACGGAAAGCGTGTTTGGATTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: REAVECEVAVAA*VGRKACLDSEG
Trigger: TCCTTCAGAATCCAAACACGCTTTCCGTCCTACCAACGCAGCCACCGCCACCTCACATTCCACAGCCTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACGACGGAAAGCGTGTTTaGATTCTGAAGGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHDGKRV*ILKDRG
Trigger: CCCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTC...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCCACAACCCTTACTGTTaGTCTATCCATATCCTCTAT +
Preference number: 4 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLHNPYC*SIHILY
Trigger: ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTG...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
3UTR CAA 72 bp CCTCGCTTCTCCATGGTAAAGGTTGAGACCAAAGAGTaGCTGCGAGAGGCTGTGGAATGTGAGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PRFSMVKVETKE*LREAVECEVAV
Trigger: CACCGCCACCTCACATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAACCTTTACCATGGAGAAGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR TCA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCAGCCCCAACAGGACATaGATAGGTGAGCAGACATAC +
Preference number: 4 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVSPNRT*IGEQTY
Trigger: GTATGTCTGCTCACCTATTCATGTCCTGTTGGGGCT...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp CCCAAGTACAGTGAGAAGCCAACAGTTACAGCTTCGTaGCTAACGTGCCCCATGGGCCAGGCAAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: PKYSEKPTVTAS*LTCPMGQANPP
Trigger: AGGAGGATTTGCCTGGCCCATGGGGCACGTTAGCAACGAAGCTGTAACTGTTGGCTTCTCACTGTACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCAAAAGAGCACCAGGTTaGGAGGATTTCCTAGCGGAA +
Preference number: 4 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVKRAPG*EDFLAE
Trigger: TTCCGCTAGGAAATCCTCTCAACCTGGTGCTCTTTT...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRAGTPL*YNGARD
Trigger: GTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCCCACAGAGGCTCGGCTaGCCGGAGCGGCGTCCGCGA +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIPQRLG*PERRPR
Trigger: TCGCGGACGCCGCTCCGGGCAGCCGAGCCTCTGTGG...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCAGTCAAGCCAACTTGTaGCCTAGCTTCCATCTCATC +
Preference number: 4 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVSQANL*PSFHLI
Trigger: GATGAGATGGAAGCTAGGGCACAAGTTGGCTTGACT...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACGTGTCCAAGACCCAATaGGAAAGAAAGGAACACCGG +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHVSKTQ*ERKEHR
Trigger: CCGGTGTTCCTTTCTTTCCCATTGGGTCTTGGACAC...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCCGCAGCCTCTTTCAGTaGGTTCTTTATCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVRSLFQ*VLYLNH
Trigger: GTGGTTCAGATAAAGAACCCACTGAAAGAGGCTGCG...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACGCTCCTGGACAAGTATaGCTGAAATTGTTACCCAGG +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHAPGQV*LKLLPR
Trigger: CCTGGGTAACAATTTCAGTCATACTTGTCCAGGAGC...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGTACCCACTTAACCAGTaGCTGCACCACATACTGTGC +
Preference number: 4 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVYPLNQ*LHHILC
Trigger: GCACAGTATGTGGTGCAGCCACTGGTTAAGTGGGTA...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTAGCATCGCTAACCTTTaGAATGTAGGTAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: RALLPHTSLTGRLASSKSSIANL*NVGKLN
Trigger: ATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCT...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGTTGAGACCAAAGAGTTaGTGCGAGAGGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVLRPKS*CERLWN
Trigger: ATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAA...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACTACGTGAGCTGCTGTTaGATGGCTAGACATTCACAA +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHYVSCC*MARHSQ
Trigger: TTGTGAATGTCTAGCCATGCAACAGCAGCTCACGTA...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCAGTCTGCTTCCAAACCTaGAGAATAGGAGATGGATGT +
Preference number: 4 (lower is better)
Translates to: DPLTSARNASRWDYRHTPVCFQT*RIGDGC
Trigger: ACATCCATCTCCTATTCTGCAGGTTTGGAAGCAGAC...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACCAGGACGGCTTTGAATaGGGCCCAACACAGATTTGT +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHQDGFE*GPTQIC
Trigger: ACAAATCTGTGTTGGGCCGCATTCAAAGCCGTCCTG...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATTGCTGCGAGAGGCTGTaGAATGTGAGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYCCERL*NVRWRW
Trigger: CCACCGCCACCTCACATTCCACAGCCTCTCGCAGCA...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCCTCTGGTATCCAGTATaGAGTACCTTCGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVLWYPV*STFEEI
Trigger: AATTTCTTCGAAGGTACTTCATACTGGATACCAGAG...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCGTCACAACAATTTCATaGCTAAGGGCAGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVVTTIS*LRAVMS
Trigger: AGACATAACTGCCCTTAGTCATGAAATTGTTGTGAC...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCAGGTATCTCGAATCATTaGAGGCAAGTTGCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: DPLTSARNASRWDYRHTPGISNH*RQVALR
Trigger: CCTTAAAGCAACTTGCCTTCAATGATTCGAGATACC...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTGTACTTCCTCATTCCTaGATTCATAACAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: RALLPHTSLTGRLASSKSVLPHS*IHNKTE
Trigger: TTCTGTTTTGTTATGAATGCAGGAATGAGGAAGTAC...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR GCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACAGCTGGGACTACAGATaGACGCCACCACACCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHSWDYR*TPPHPA
Trigger: AGCAGGGTGTGGTGGCGTGCATCTGTAGTCCCAGCT...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCAACATCTATTCTCTCATaGCTTTCACACCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DPLTSARNASRWDYRHTPTSILS*LSHLSP
Trigger: TGGGGAAAGGTGTGAAAGGCATGAGAGAATAGATGT...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGACACTCAGGGCTCACTaGAGCCTTGATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRTLRAH*SLDLPG
Trigger: GCCTGGGAGATCAAGGCTGCAGTGAGCCCTGAGTGT...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCATTCCCACATTCACCATaGCGACTTAGGTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: DPLTSARNASRWDYRHTPFPHSP*RLRLSE
Trigger: TTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAA...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCCTGGCTTGACCAGTCACTTTGGAAGCTaGTTCTCTTGGAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: EAGSLGETVWTLKFPGLTSHFGS*FSWRDS
Trigger: ACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACT...GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CCA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTTTTAACAGTAAATGTTaGGAGGCACACATATATTCC +
Preference number: 4 (lower is better)
Translates to: RALLPHTSLTGRLASSKSFNSKC*EAHIYS
Trigger: GGAATATATGTGTGCCTCCCAACATTTACTGTTAAA...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR TCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGTGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGT +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKCLTRH*PEGSHR
Trigger: ACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCA...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATCTCATGAAAGGAAACTaGGGACGGCAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYLMKGN*GRQRQA
Trigger: TGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAG...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCGATTCAACAGAGATCTaGAGGTCTAAGATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVDSTEI*RSKMKK
Trigger: TTTCTTCATCTTAGACCTTCAGATCTCTGTTGAATC...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACAAAGTGGCATTTTGGTaGGAATTGAAGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHKVAFW*ELKVWN
Trigger: ATTCCACACCTTCAATTCTCACCAAAATGCCACTTT...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp ATACTGGTTCAAAGTCATTCCCGGCTGAATTTCAGAGAACAAGGTATGAACATGCAGGCTGGAGTGCAGTaGCACTCAGGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: ILVQSHSRLNFREQGMNMQAGVQ*HSGLTA
Trigger: TGCAGTGAGCCCTGAGTGTCACTGCACTCCAGCCTG...CATGTTCATACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTTGAACCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCCTGTGCGGAGAGAGGTaGCCAGCCCACACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRLCGER*PAHTQL
Trigger: CAGCTGGGTGTGGGCTGGTCACCTCTCTCCGCACAG...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR GCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACAATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHNGARD*FNPTVH
Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATT...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPAGTPL*YNGARD
Trigger: GTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGC...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGCAGAAGACGCAGATCTaGCGGGACCCCGCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: FLHLASKTQRTLDILLMWQKTQI*RDPAVL
Trigger: TAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTG...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGACGGAAAGCGTGTTTaGATTCTGAAGGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYDGKRV*ILKDRG
Trigger: CCCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATTGCTGCGAGAGGCTGTaGAATGTGAGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYCCERL*NVRWRW
Trigger: CCACCGCCACCTCACATTCCACAGCCTCTCGCAGCA...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACAGCATCGCTAACCTTTaGAATGTAGGTAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHSIANL*NVGKLN
Trigger: ATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCT...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp GAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCCTGGCTTGACCAGGAAGATGGCTTTGTaGCCGTTTCAGATTATTTCT +
Preference number: 4 (lower is better)
Translates to: EAGSLGETVWTLKFPGLTRKMAL*PFQIIS
Trigger: AGAAATAATCTGAAACGGTCACAAAGCCATCTTCCT...GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR TCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGCLTRH*PEGSHR
Trigger: ACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCA...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFICLTRH*PEGSHR
Trigger: ACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATTGCGGAATAAAGCAGTaGCTGCTCCAAGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYCGIKQ*LLQGLM
Trigger: CATCAGGCCTTGGAGCAGTCACTGCTTTATTCCGCA...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGGAGGCTGTAGTGAGCTaGGATCACGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKEAVVS*DHATAL
Trigger: GAGTGCAGTGGCGTGATCTCAGCTCACTACAGCCTC...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCATTGCAAATACTAAAGTaGACATGCAATGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DPLTSARNASRWDYRHTPLQILK*TCNVEA
Trigger: AGCTTCCACATTGCATGTTCACTTTAGTATTTGCAA...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLEAGTPL*YNGARD
Trigger: GTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGC...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNAGTPL*YNGARD
Trigger: GTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCCAGAAGACGCAGATCTaGCGGGACCCCGCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGQKTQI*RDPAVL
Trigger: TAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTG...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGATGATGGAACTGTTCTaGATCTTGACTGTATCAGTG +
Preference number: 4 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVMMELF*ILTVSV
Trigger: CACTGATACAGTCAAGATGCAGAACAGTTCCATCAT...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACCTTTTCCATCAAACCTaGTCTACCTGCAATCTTTGC +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHLFHQT*STCNLC
Trigger: GCAAAGATTGCAGGTAGAGCAGGTTTGATGGAAAAG...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTGCTGCGAGAGGCTGTaGAATGTGAGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFICCERL*NVRWRW
Trigger: CCACCGCCACCTCACATTCCACAGCCTCTCGCAGCA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTGCTGCGAGAGGCTGTaGAATGTGAGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGCCERL*NVRWRW
Trigger: CCACCGCCACCTCACATTCCACAGCCTCTCGCAGCA...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACCACTTTTCTCTAATGTaGGAAGTTCACACATTCTAC +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHHFSLM*EVHTFY
Trigger: GTAGAATGTGTGAACTTCCCACATTAGAGAAAAGTG...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGGCAGTGCTTATACAGTaGCCATTACTACTAGAATTC +
Preference number: 4 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVAVLIQ*PLLLEF
Trigger: GAATTCTAGTAGTAATGGCCACTGTATAAGCACTGC...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATTCCACTAGGTCCTGCTaGTCATTGGCTTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYSTRSC*SLACRK
Trigger: CTTCCTACAAGCCAATGATCAGCAGGACCTAGTGGA...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATAGAGGCTGTGGAATGTaGGGTGGCGGTGGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNRGCGM*GGGGCV
Trigger: AACGCAGCCACCGCCACCTCACATTCCACAGCCTCT...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTAGAGGCTGTGGAATGTaGGGTGGCGGTGGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFRGCGM*GGGGCV
Trigger: AACGCAGCCACCGCCACCTCACATTCCACAGCCTCT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATTGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNCLTRH*PEGSHR
Trigger: ACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCA...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACCATTCACAAGTCACTTaGTTCAACAGAGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHHSQVT*FNRDLK
Trigger: CTTCAGATCTCTGTTGAATCAAGTGACTTGTGAATG...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACTCAGGTGATCCAGCCTaGGAAATGCCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNSGDPA*EMPWPP
Trigger: GGGAGGCCAAGGCATTTCTCAGGCTGGATCACCTGA...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGACTCCTGACCTCAGGTaGTCCAGCCTGAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKTPDLR*SSLRNA
Trigger: GGCATTTCTCAGGCTGGATCACCTGAGGTCAGGAGT...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACATCATTATGTCGCTTTaGTTACATTCCTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHIIMSL*LHSWTL
Trigger: TAAAGTCCAGGAATGTAAGCAAAGCGACATAATGAT...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACATCCAGCCTGAGAAATaGCTTGGCCTCCCAAAATGC +
Preference number: 4 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHIQPEK*LGLPKC
Trigger: GCATTTTGGGAGGCCAAGGCATTTCTCAGGCTGGAT...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGTGTAGGAAATCTGACTaGCTTCAGACTGCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRCRKSD*LQTAPL
Trigger: CAACGGGGCAGTCTGAAGGCAGTCAGATTTCCTACA...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR CCA 90 bp GAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCCTGGCTTGACCATGAACCTCTTTAAGTaGTATTACACGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: EAGSLGETVWTLKFPGLTMNLFK*YYTKRF
Trigger: GAACCTCTTCGTGTAATACCACTTAAAGAGGTTCAT...GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYDLEVP*LDLGKR
Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGGAAGCTGGTTCTCTTaGAGAGACAGTCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYGSWFS*RDSLDL
Trigger: AAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TCAGTCACTTTGGAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCTTGTTCAGTCACTTTaGAAGCTGGTTCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SVTLEAGSLGETVWTLKFLVQSL*KLVLLE
Trigger: CTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAG...GAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
3UTR CAA 72 bp GCTCACGAAATGGACAGACAGGGAAGCTATGGGTGTTaGAGTCAGAAGGAAATCATCTCCACGGAATTACAC +
Preference number: 4 (lower is better)
Translates to: AHEMDRQGSYGC*SQKEIISTELH
Trigger: GTGTAATTCCGTGGAGATGATTTCCTTCTGACTCAAACACCCATAGCTTCCCTGTCTGTCCATTTCGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGAAGGCACGTTTGCGTaGGAGCCCACATACGTGCTG +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNEGTFA*EPTYVL
Trigger: CAGCACGTATGTGGGCTCTCACGCAAACGTGCCTTC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR TCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAAGAGGCTGTGGAATGTaGGGTGGCGGTGGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLERGCGM*GGGGCV
Trigger: AACGCAGCCACCGCCACCTCACATTCCACAGCCTCT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAATGCCTCACACGTCACTaGCCGGAAGGCTCGCATCGT +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLECLTRH*PEGSHR
Trigger: ACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCA...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACCTCATGAAAGGAAACTaGGGACGGCAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNLMKGN*GRQRQA
Trigger: TGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAG...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTGAGGCTGTAGTGAGCTaGGATCACGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFEAVVS*DHATAL
Trigger: GAGTGCAGTGGCGTGATCTCAGCTCACTACAGCCTC...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTAGAGGCTGTAGTGAGCTaGGATCACGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLEAVVS*DHATAL
Trigger: GAGTGCAGTGGCGTGATCTCAGCTCACTACAGCCTC...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTGTGAGCAGCCCAGATaGTCCACACGATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFICEQPR*STRCSE
Trigger: CTCAGAGCATCGTGTGGATCATCTGGGCTGCTCACA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACGAATACCAATTCTTTTaGAGCTGTTCTGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHEYQFF*SCSVTA
Trigger: AGCTGTTACAGAACAGCTTCAAAAGAATTGGTATTC...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGACAGCCTTCTGGCCTaGCGCATAGAAGACGCAGAT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGDSLLA*RIEDAD
Trigger: ATCTGCGTCTTCTATGCGGCAGGCCAGAAGGCTGTC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGACAGCCTTCTGGCCTaGCGCATAGAAGACGCAGAT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIDSLLA*RIEDAD
Trigger: ATCTGCGTCTTCTATGCGGCAGGCCAGAAGGCTGTC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGTTGAGACCAAAGAGTTaGTGCGAGAGGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRLRPKS*CERLWN
Trigger: ATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAA...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCAGAACATTTTCCTATaGTATCGAACAAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVQNIFL*YRTRIV
Trigger: AACTATCCTTGTTCGATAGCATAGGAAAATGTTCTG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGCAGAAGACGCAGATCTaGCGGGACCCCGCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERQKTQI*RDPAVL
Trigger: TAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTG...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCTTAGGTCTCCTGTGTaGTGCATGTCGTACACTGAA +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRLRSPV*CMSYTE
Trigger: TTCAGTGTACGACATGCAGCACACAGGAGACCTAAG...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACCCTCTTGCAGCAAAATaGCTCAAAAAGAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHPLAAK*LKKSSI
Trigger: AATAGAACTCTTTTTGAGGCATTTTGCTGCAAGAGG...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATTTGCCCAGGCTGGAGTaGAGTGACACTCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDLPRLE*SDTQGS
Trigger: TGAGCCCTGAGTGTCACTGCACTCCAGCCTGGGCAA...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGACGGAAAGCGTGTTTaGATTCTGAAGGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIDGKRV*ILKDRG
Trigger: CCCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGACGGAAAGCGTGTTTaGATTCTGAAGGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGDGKRV*ILKDRG
Trigger: CCCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTGCACACAGAGCTCAGTaGGTTTTCAGTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFAHRAQ*VFSAAQ
Trigger: CTGAGCAGCACTGAAAACCCACTGAGCTCTGTGTGC...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATAGCCTCCCACGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNSLPRS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACGTGGGAGGCT...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACACTACCACTTTAATCTaGTGGTATGTTTGTGATCAC +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHTTTLI*WYVCDH
Trigger: GTGATCACAAACATACCACCAGATTAAAGTGGTAGT...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATCGCAATGCAAGTCGCTaGGACTACAGACACACACCA +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYRNASR*DYRHTP
Trigger: TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCG...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp GAAGGAAATCATCTCCACGGAATTACACTCGAAGGGTaGTCCTTGCTTCTAAGGGTGAATATGGAAGACCAC +
Preference number: 4 (lower is better)
Translates to: EGNHLHGITLEG*SLLLRVNMEDH
Trigger: GTGGTCTTCCATATTCACCCTTAGAAGCAAGGACAACCCTTCGAGTGTAATTCCGTGGAGATGATTTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTCTCATGAAAGGAAACTaGGGACGGCAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFLMKGN*GRQRQA
Trigger: TGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAG...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCCTCATGAAAGGAAACTaGGGACGGCAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRLMKGN*GRQRQA
Trigger: TGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAG...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATCCTGCGAGCAGAATTTaGAACATCCGATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYPASRI*NIRSPP
Trigger: AGGAGGAGATCGGATGTTTCAAATTCTGCTCGCAGG...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATCTAGTCTCGAACTCCTaGCCTCAGGTGATCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNLVSNS*PQVIQP
Trigger: AGGCTGGATCACCTGAGGTCAGGAGTTCGAGACTAG...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGTCCAATGAACTGTACTaGACGTTGGCATGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FLHLASKTQRTLDILLMWSNELY*TLAWEG
Trigger: CCCTTCCCATGCCAACGTTCAGTACAGTTCATTGGA...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCATGGAGCTGCCCAAATaGGCTCCTTCAACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGMELPK*APSTQR
Trigger: TCTCTGGGTTGAAGGAGCTCATTTGGGCAGCTCCAT...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR GCA 90 bp TCAGTCACTTTGGAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCTAGAAAACCACAAATaGGATTCTGACGATCCACAT +
Preference number: 4 (lower is better)
Translates to: SVTLEAGSLGETVWTLKFLENHK*DSDDPH
Trigger: ATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAG...GAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR GCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATAATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYNGARD*FNPTVH
Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAGCCCACATACGTGCTaGATTCACCAGCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYSPHTC*IHQLLM
Trigger: CATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCT...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR GCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAGGTCTCCTGTGTGCTaGATGTCGTACACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYRSPVC*MSYTED
Trigger: GTCTTCAGTGTACGACATGCAGCACACAGGAGACCT...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATCAAACCTGCTCTACCTaGAATCTTTGCTACCTCAGT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYQTCST*NLCYLS
Trigger: ACTGAGGTAGCAAAGATTGCAGGTAGAGCAGGTTTG...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKDLEVP*LDLGKR
Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGGAAGCTGGTTCTCTTaGAGAGACAGTCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYGSWFS*RDSLDL
Trigger: AAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCTTGTTCAGTCACTTTaGAAGCTGGTTCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRLVQSL*KLVLLE
Trigger: CTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAG...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCCCACACCATCACCCATaGGCCATCTCAGTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGPHHHP*AISVSD
Trigger: ATCAGAGACTGAGATGGCCCATGGGTGATGGTGTGG...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACTTCATTTTCTTCACTTaGCTTCTAAGACACAACGTA +
Preference number: 4 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHFIFFT*LLRHNV
Trigger: TACGTTGTGTCTTAGAAGCCAAGTGAAGAAAATGAA...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGGTCAGTATCAGCAGTaGAAGCCAGGGAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNGQYQQ*KPGRLR
Trigger: ACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp TTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTaGATGTGGTGGTCACACCTTCTCATTCATCATGGC +
Preference number: 4 (lower is better)
Translates to: LASKTQRTLDIL*MWWSHLLIHHG
Trigger: GCCATGATGAATGAGAAGGTGTGACCACCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp GCCCTAGCTTCCATCTCATCTCACCTCCTCAAGGACTaGTTCCAACAATTCTGTACTCTTCTACATCATCAA +
Preference number: 4 (lower is better)
Translates to: ALASISSHLLKD*FQQFCTLLHHQ
Trigger: TTGATGATGTAGAAGAGTACAGAATTGTTGGAACAAGTCCTTGAGGAGGTGAGATGAGATGGAAGCTAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp CTAAGCATATCAATTCTCATAGAGGAAATGAGGAGGTaGTCAATGGCACACCCTCAAAAGAGCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSISILIEEMRR*SMAHPQKSTRL
Trigger: CAACCTGGTGCTCTTTTGAGGGTGTGCCATTGACAACCTCCTCATTTCCTCTATGAGAATTGATATGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTCCACTAGGTCCTGCTaGTCATTGGCTTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGSTRSC*SLACRK
Trigger: CTTCCTACAAGCCAATGATCAGCAGGACCTAGTGGA...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGGGCCATTTTTACTTTaGGGTCTTAACAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRGPFLL*GLNRAC
Trigger: ACAAGCTCTGTTAAGACCTCAAAGTAAAAATGGCCC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGGGCCATTTTTACTTTaGGGTCTTAACAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYGPFLL*GLNRAC
Trigger: ACAAGCTCTGTTAAGACCTCAAAGTAAAAATGGCCC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGCTCATGAAAGGAAACTaGGGACGGCAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERLMKGN*GRQRQA
Trigger: TGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAG...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCTGCGGAATAAAGCAGTaGCTGCTCCAAGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRCGIKQ*LLQGLM
Trigger: CATCAGGCCTTGGAGCAGTCACTGCTTTATTCCGCA...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTTGCGGAATAAAGCAGTaGCTGCTCCAAGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: NGLDTTSKRRYLESLKASCGIKQ*LLQGLM
Trigger: CATCAGGCCTTGGAGCAGTCACTGCTTTATTCCGCA...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATGCGGAATAAAGCAGTaGCTGCTCCAAGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLCGIKQ*LLQGLM
Trigger: CATCAGGCCTTGGAGCAGTCACTGCTTTATTCCGCA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACAAAGTCATTCCCGGCTaGATTTCAGAGAACAAGGTA +
Preference number: 4 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHKVIPG*ISENKV
Trigger: TACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTT...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTCACACAGGAAGTACGTaGGCTGCTGTTGCATGGCTA +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPHTGST*AAVAWL
Trigger: TAGCCATGCAACAGCAGCTCACGTACTTCCTGTGTG...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGCTGCATGTCGTACACTaGAGACACCAATTGACCCAA +
Preference number: 4 (lower is better)
Translates to: FLHLASKTQRTLDILLMWLHVVH*RHQLTQ
Trigger: TTGGGTCAATTGGTGTCTTCAGTGTACGACATGCAG...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGGCTGATGTAAGTTCCTaGCCATGGAAAGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKADVSS*PWKVLH
Trigger: GTGGAGAACTTTCCATGGTCAGGAACTTACATCAGC...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGAAGCTATGGGTGTTTaGGTCAGAAGGAAATCATCT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYEAMGV*VRRKSS
Trigger: AGATGATTTCCTTCTGACTCAAACACCCATAGCTTC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGAGGCAGTTTCTACAATaGCTGGCCCCATACATTTAT +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRRQFLQ*LAPYIY
Trigger: ATAAATGTATGGGGCCAGTCATTGTAGAAACTGCCT...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRALIQL*ISSGLS
Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATACCTCTGGACTGCACTaGTGTAGTAGGAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYTSGLH*CSRKFF
Trigger: GAAAAATTTCCTACTACAGCAGTGCAGTCCAGAGGT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTAGGAAGTACGTGAGCTaGTGTTGCATGGCTAGACAT +
Preference number: 4 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFRKYVS*CCMARH
Trigger: ATGTCTAGCCATGCAACAGCAGCTCACGTACTTCCT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACACCATCTCAGCTTACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNTISAY*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTAAGCTGAGATGGT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGTTCCCACATTCACCATaGCGACTTAGGTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRFPHSP*RLRLSE
Trigger: TTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAA...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGACGGAAAGCGTGTTTaGATTCTGAAGGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNDGKRV*ILKDRG
Trigger: CCCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGDLEVP*LDLGKR
Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGGAAGCTGGTTCTCTTaGAGAGACAGTCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGGSWFS*RDSLDL
Trigger: AAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAGAAACAGACGCCATTaGGACCAAAGGCCCTATTTG +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYRNRRH*DQRPYL
Trigger: CAAATAGGGCCTTTGGTCCCAATGGCGTCTGTTTCT...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCCAGGGCTCATTCCATaGTTCTCTTTTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRPGLIP*FSFLLS
Trigger: TGAAAGAAGAAAAGAGAACCATGGAATGAGCCCTGG...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp ATACTGGTTCAAAGTCATTCCCGGCTGAATTTCAGAGAACAAGGTATGAACATGCAGACAGGGAAGCTATaGGTGTTTGAGTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ILVQSHSRLNFREQGMNMQTGKL*VFESEG
Trigger: TCCTTCTGACTCAAACACCCATAGCTTCCCTGTCTG...CATGTTCATACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTTGAACCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp AACAGACGTGGAATATTTATCACCAATAGGGAACGTTaGCAAGGAGCAGCCTCTAACACCCGACATAGTTTT +
Preference number: 4 (lower is better)
Translates to: NRRGIFITNRER*QGAASNTRHSF
Trigger: AAAACTATGTCGGGTGTTAGAGGCTGCTCCTTGCAAACGTTCCCTATTGGTGATAAATATTCCACGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp TCACACCTTTCCCCACCTTACTTGCAGTTGCGAATTTaGTTTCCTAGTTTACTGAGACTAAGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: SHLSPPYLQLRI*FPSLLRLRQRL
Trigger: AAGTCTCTGCCTTAGTCTCAGTAAACTAGGAAACAAAATTCGCAACTGCAAGTAAGGTGGGGAAAGGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp TCATGCCTTTCACACCTTTCCCCACCTTACTTGCAGTaGCGAATTTTGTTTCCTAGTTTACTGAGACTAAGG +
Preference number: 4 (lower is better)
Translates to: SCLSHLSPPYLQ*RILFPSLLRLR
Trigger: CCTTAGTCTCAGTAAACTAGGAAACAAAATTCGCAACTGCAAGTAAGGTGGGGAAAGGTGTGAAAGGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp AATCATCTCCACGGAATTACACTCGAAGGGTTGTCCTaGCTTCTAAGGGTGAATATGGAAGACCACCTAAAA +
Preference number: 4 (lower is better)
Translates to: NHLHGITLEGLS*LLRVNMEDHLK
Trigger: TTTTAGGTGGTCTTCCATATTCACCCTTAGAAGCAAGGACAACCCTTCGAGTGTAATTCCGTGGAGATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATCCACTAGGTCCTGCTaGTCATTGGCTTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLSTRSC*SLACRK
Trigger: CTTCCTACAAGCCAATGATCAGCAGGACCTAGTGGA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATTCCACTAGGTCCTGCTaGTCATTGGCTTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNSTRSC*SLACRK
Trigger: CTTCCTACAAGCCAATGATCAGCAGGACCTAGTGGA...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATAGGAAGATGGCTTTGTaGCCGTTTCAGATTATTTCT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYRKMAL*PFQIIS
Trigger: AGAAATAATCTGAAACGGTCACAAAGCCATCTTCCT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGTCACAACAATTTCATaGCTAAGGGCAGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYVTTIS*LRAVMS
Trigger: AGACATAACTGCCCTTAGTCATGAAATTGTTGTGAC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGAATCATGGAGCACTGTaGGCAGCCCAGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERNHGAL*AAQMIH
Trigger: GTGGATCATCTGGGCTGCTCACAGTGCTCCATGATT...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTAGAAAACCTAACAGGTaGAACGCAGACACAAACCTC +
Preference number: 4 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFRKPNR*NADTNL
Trigger: GAGGTTTGTGTCTGCGTTTCACCTGTTAGGTTTTCT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTCTCCCATGGCTGGCGTaGACAAGAAAACATGGCTTA +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPLPWLA*TRKHGL
Trigger: TAAGCCATGTTTTCTTGTTCACGCCAGCCATGGGAG...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGGGCGCTATTACCACATaGATATACCACAGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: FLHLASKTQRTLDILLMWGAITT*IYHSKA
Trigger: TGCCTTACTGTGGTATATTCATGTGGTAATAGCGCC...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCGGCCATCTCAGTCTCTaGTGCGTAGTTTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRGHLSL*CVVFHA
Trigger: AGCATGGAAAACTACGCATCAGAGACTGAGATGGCC...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGCACAGAAGCACTGTGTaGGAAGGTGGACATGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERHRSTV*EGGHGR
Trigger: CCTTCCATGTCCACCTTCTCACACAGTGCTTCTGTG...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGTGAAGAGGCTATCTTaGCCATCCAGCCCAGTCAAG +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNVKRLS*PSSPVK
Trigger: CTTGACTGGGCTGGATGGTCAAGATAGCCTCTTCAC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGGCTGTGAGTCTGACTaGTTTGGTACTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRGCESD*FGTVIF
Trigger: AAAAATTACAGTACCAAAGCAGTCAGACTCACAGCC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYNGARD*FNPTVH
Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATT...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTTGAGACCAAAGAGTTaGTGCGAGAGGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGLRPKS*CERLWN
Trigger: ATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAA...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTTGAGACCAAAGAGTTaGTGCGAGAGGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFILRPKS*CERLWN
Trigger: ATTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATCCTCTTAACTTGACCTaGGAGCAGAATTTGAAACAT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYPLNLT*EQNLKH
Trigger: ATGTTTCAAATTCTGCTCGCAGGTCAAGTTAAGAGG...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGAACACTGTCATTCATaGACACAGAGCTCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIEHCHS*TQSSVG
Trigger: ACCCACTGAGCTCTGTGTGCATGAATGACAGTGTTC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTAAACCACTGCACTGGTaGAGTGCTTATACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: NGLDTTSKRRYLESLKASKPLHW*SAYTVA
Trigger: GGCCACTGTATAAGCACTGCACCAGTGCAGTGGTTT...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGACCTTGAAGTTCCCTaGCTTGACCTTGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNDLEVP*LDLGKR
Trigger: TCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTGGAAGCTGGTTCTCTTaGAGAGACAGTCTGGACCTT +
Preference number: 4 (lower is better)
Translates to: NGLDTTSKRRYLESLKASGSWFS*RDSLDL
Trigger: AAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCC...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGAGTCACTTTGGAAGCTaGTTCTCTTGGAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKSHFGS*FSWRDS
Trigger: ACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACT...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCACAACCCTTACTGTTaGTCTATCCATATCCTCTAT +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRHNPYC*SIHILY
Trigger: ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTG...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCACTCTAGCTACACCCTaGGCACAGATCCTAATGATG +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGTLATP*AQILMM
Trigger: CATCATTAGGATCTGTGCCCAGGGTGTAGCTAGAGT...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCACCTCCCATGGCTaGCGTGAACAAGAAAACATG +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIITSHG*REQENM
Trigger: CATGTTTTCTTGTTCACGCCAGCCATGGGAGGTGAT...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTAGCTTCCTGAATAGCTaGGACTACAGGCGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSSFLNS*DYRRVG
Trigger: ACCCACACGCCTGTAGTCCCAGCTATTCAGGAAGCT...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGGAGGGAAAGAGGCAATaGAGCCTTAAGAGAACAATG +
Preference number: 4 (lower is better)
Translates to: FLHLASKTQRTLDILLMWEGKRQ*SLKRTM
Trigger: CATTGTTCTCTTAAGGCTCCATTGCCTCTTTCCCTC...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGTGAACCACCGTGTCTaGCCAAGCCACTGTCTTAAG +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNVNHRV*PSHCLK
Trigger: CTTAAGACAGTGGCTTGGCCAGACACGGTGGTTCAC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATTGGGAAACAGGGAGATaGAAAGGTTCAGTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYWETGR*KGSVEL
Trigger: CAGTTCAACTGAACCTTTCCATCTCCCTGTTTCCCA...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTGGGAATCCAGTGTTTTaGGGTCACCAAGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPGNPVF*GHQGLC
Trigger: ACACAAGCCTTGGTGACCCCAAAACACTGGATTCCC...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTGAGGAGCTCACGAAATaGACAGACAGGGAAGCTATG +
Preference number: 4 (lower is better)
Translates to: NGLDTTSKRRYLESLKASEELTK*TDREAM
Trigger: CATAGCTTCCCTGTCTGTCCATTTCGTGAGCTCCTC...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp ATTCTCTCATGCCTTTCACACCTTTCCCCACCTTACTaGCAGTTGCGAATTTTGTTTCCTAGTTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: ILSCLSHLSPPY*QLRILFPSLLR
Trigger: TCTCAGTAAACTAGGAAACAAAATTCGCAACTGCAAGTAAGGTGGGGAAAGGTGTGAAAGGCATGAGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGAGCATCGCTAACCTTTaGAATGTAGGTAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRSIANL*NVGKLN
Trigger: ATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCT...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGGGCCATTTTTACTTTaGGGTCTTAACAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYGPFLL*GLNRAC
Trigger: ACAAGCTCTGTTAAGACCTCAAAGTAAAAATGGCCC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATTTGCAAATACTAAAGTaGACATGCAATGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYLQILK*TCNVEA
Trigger: AGCTTCCACATTGCATGTTCACTTTAGTATTTGCAA...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCCAGGACATGAATAGGTaGGCAGACATACTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIQDMNR*ADILVQ
Trigger: TTGAACCAGTATGTCTGCTCACCTATTCATGTCCTG...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACTTATATTCAGACCAATaGGACACTAGGCAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHLYSDQ*DTRQEE
Trigger: TTCTTCTTGCCTAGTGTCTCATTGGTCTGAATATAA...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACGACACAACGTACTCTTaGTATCCTGTTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNDTTYS*YPVDVV
Trigger: CACCACATCAACAGGATATCAAGAGTACGTTGTGTC...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGAAACACCTGTGCATTTaGAGAAGTCAAGCCAACTTG +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKKHLCI*RSQANL
Trigger: CAAGTTGGCTTGACTTCTTCAAATGCACAGGTGTTT...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTACTCATCTCGAACTCCTaGACTCAAGCAATCTTCTCG +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLLISNS*TQAIFS
Trigger: CGAGAAGATTGCTTGAGTTCAGGAGTTCGAGATGAG...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACGTAACCACCTTTCTTTaGTTCCTGATGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHVTTFL*FLMKFC
Trigger: ACAGAATTTCATCAGGAATCAAAGAAAGGTGGTTAC...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp ATACTGGTTCAAAGTCATTCCCGGCTGAATTTCAGAGAACAAGGTATGAACATGTGTCACATGGAAAAGTaGGTCATGGAAGGTAATGAG +
Preference number: 4 (lower is better)
Translates to: ILVQSHSRLNFREQGMNMCHMEK*VMEGNE
Trigger: CTCATTACCTTCCATGACTCACTTTTCCATGTGACA...CATGTTCATACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTTGAACCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACCAAAGATTCTTGTCTTaGGGAAGGCTTAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNQRFLS*GRLRLT
Trigger: TGTGAGCCTAAGCCTTCCTCAAGACAAGAATCTTTG...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAAGTCAAGCCTTCAGATaGCTCTCATTCCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLESQAFR*LSFQLP
Trigger: TGGCAGCTGGAATGAGAGTCATCTGAAGGCTTGACT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR GCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCAATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGNGARD*FNPTVH
Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATT...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACACCCGGAGATTAAGATaGCCTCTGCTTTCCGCCTTA +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNTRRLR*PLLSAL
Trigger: TAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATCCAATAGGGAACGTTTaGAAGGAGCAGCCTCTAACA +
Preference number: 4 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDPIGNV*KEQPLT
Trigger: TGTTAGAGGCTGCTCCTTGCAAACGTTCCCTATTGG...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAAAGTGCACCAAGCACTaGACTAGGCCCTGTATATGG +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLEKCTKH*TRPCIW
Trigger: CCATATACAGGGCCTAGTGCAGTGCTTGGTGCACTT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTAAGAGGAGGTGCGGAATaGCATAGGTTATTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLRGGAE*HRLLGS
Trigger: GCTTCCTAATAACCTATGGCATTCCGCACCTCCTCT...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATCCACTAAAGAAAACGTaGATTAGAGGTATACATACC +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYPLKKT*IRGIHT
Trigger: GGTATGTATACCTCTAATGCACGTTTTCTTTAGTGG...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTCTGCACCACATACTGTaGCTTCCTACCCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFLHHIL*LPTPDK
Trigger: TTTATCTGGGGTAGGAAGGCACAGTATGTGGTGCAG...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATACTGCACTGGTGCAGTaGTTATACAGTGGCCATTAC +
Preference number: 4 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDTALVQ*LYSGHY
Trigger: GTAATGGCCACTGTATAAGCACTGCACCAGTGCAGT...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGATGGGAGCAATAATTTaGACTTCTAGCAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRMGAII*TSSKFS
Trigger: TGAGAACTTGCTAGAAGTGCAAATTATTGCTCCCAT...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGTTCCCACATTCACCATaGCGACTTAGGTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKFPHSP*RLRLSE
Trigger: TTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAA...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCAGTCACTTTGGAAGCTaGTTCTCTTGGAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGSHFGS*FSWRDS
Trigger: ACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACT...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCCTTGTTCAGTCACTTTaGAAGCTGGTTCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFILVQSL*KLVLLE
Trigger: CTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAG...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGGTGAGCAGACATACTaGTTCAAAGTCATTCCCGGC +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNGEQTY*FKVIPG
Trigger: GCCGGGAATGACTTTGAACCAGTATGTCTGCTCACC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGGCAACCTGGTATATTTaGCTGGATTACTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKATWYI*LDYSSY
Trigger: GTAGCTAGAGTAATCCAGCCAAATATACCAGGTTGC...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTCTGACTCTGGACAAGTaGCTAAGTCTGCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPLTLDK*LSLLPN
Trigger: GTTTGGAAGCAGACTTAGCCACTTGTCCAGAGTCAG...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTTCGGCAGATTCCTCGTaGACATCTTTGTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NGLDTTSKRRYLESLKASSADSS*TSLSSS
Trigger: AGAAGACGACAAAGATGTCCACGAGGAATCTGCCGA...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTCTAGACCTCCAAAACTaGGATTACAGGCGTGAACCA +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFLDLQN*DYRREP
Trigger: TGGTTCACGCCTGTAATCCCAGTTTTGGAGGTCTAG...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGGTGAGAAGGTGGACATaGAAGGGCAATGAACGTAGG +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERVRRWT*KGNERR
Trigger: CCTACGTTCATTGCCCTTCCATGTCCACCTTCTCAC...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACTGTTTCATGTTCAGTTaGTCAGAGCCGGTTCATGCA +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNCFMFS*SEPVHA
Trigger: TGCATGAACCGGCTCTGACCAACTGAACATGAAACA...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTAGGAAGATGGCTTTGTaGCCGTTTCAGATTATTTCT +
Preference number: 4 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFRKMAL*PFQIIS
Trigger: AGAAATAATCTGAAACGGTCACAAAGCCATCTTCCT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGGGCCATTTTTACTTTaGGGTCTTAACAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGGPFLL*GLNRAC
Trigger: ACAAGCTCTGTTAAGACCTCAAAGTAAAAATGGCCC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAACTCTTGATATCCTGTTaGTGTGGTGGTCACACCTTC +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLELLISC*CGGHTF
Trigger: GAAGGTGTGACCACCACATCAACAGGATATCAAGAG...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTCAGCATTGGATATTTTaGGTTGAAGAACAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFQHWIF*VEEQSG
Trigger: CCCACTTTGTTCTTCAACTCAAAATATCCAATGCTG...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTCTGGTGGTATGTTTGTaGTCACATTGCTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPLVVCL*SHCFQV
Trigger: TACCTGGAAGCAATGTGATCACAAACATACCACCAG...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp ATACTGGTTCAAAGTCATTCCCGGCTGAATTTCAGAGAACAAGGTATGAACATGCTAGAAAACCACAAATaGGATTCTGACGATCCACAT +
Preference number: 4 (lower is better)
Translates to: ILVQSHSRLNFREQGMNMLENHK*DSDDPH
Trigger: ATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAG...CATGTTCATACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTTGAACCAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATATCATTATGTCGCTTTaGTTACATTCCTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYIIMSL*LHSWTL
Trigger: TAAAGTCCAGGAATGTAAGCAAAGCGACATAATGAT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGALIQL*ISSGLS
Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIALIQL*ISSGLS
Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTTCTTCTTTTCTCTATaGCGGTATAACCCACAACCC +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIFFFSL*RYNPQP
Trigger: GGGTTGTGGGTTATACCGGCATAGAGAAAAGAAGAA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACTTCTTCTTTTCTCTATaGCGGTATAACCCACAACCC +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNFFFSL*RYNPQP
Trigger: GGGTTGTGGGTTATACCGGCATAGAGAAAAGAAGAA...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp ATACTGGTTCAAAGTCATTCCCGGCTGAATTTCAGAGAACAAGGTATGAACATGTTCCGCCTTACATCATaGCGTCTAAATAATCATGGA +
Preference number: 4 (lower is better)
Translates to: ILVQSHSRLNFREQGMNMFRLTS*RLNNHG
Trigger: TCCATGATTATTTAGACGGCATGATGTAAGGCGGAA...CATGTTCATACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTTGAACCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCCTCAAGTGTTCCAATTaGCTCAGCTTCCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRLKCSN*LSFLNS
Trigger: GCTATTCAGGAAGCTGAGGCAATTGGAACACTTGAG...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGAACAAAGTGGGATCTaGAGTAATGCATTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYEQSGI*SNAFLL
Trigger: AAGGAGAAATGCATTACTGCAGATCCCACTTTGTTC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCAGTCACTTTGGAAGCTaGTTCTCTTGGAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRSHFGS*FSWRDS
Trigger: ACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACT...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATCTTGTTCAGTCACTTTaGAAGCTGGTTCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNLVQSL*KLVLLE
Trigger: CTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAG...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGCACAACCCTTACTGTTaGTCTATCCATATCCTCTAT +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKHNPYC*SIHILY
Trigger: ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTG...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGTTTAACAGTAAATGTTaGGAGGCACACATATATTCC +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRFNSKC*EAHIYS
Trigger: GGAATATATGTGTGCCTCCCAACATTTACTGTTAAA...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACACACAGCTACATATTTaGAGCAGCATCAACAAGACC +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNTQLHI*SSINKT
Trigger: GGTCTTGTTGATGCTGCTCCAAATATGTAGCTGTGT...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGGGACTACAGGCGTGTaGGTCTACATTATTTCTTAC +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNGTTGV*VYIISY
Trigger: GTAAGAAATAATGTAGACCCACACGCCTGTAGTCCC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATACCACTTTAATCTGGTaGTATGTTTGTGATCACATT +
Preference number: 4 (lower is better)
Translates to: LYAGITHNPYCWSIHILYTTLIW*YVCDHI
Trigger: AATGTGATCACAAACATACCACCAGATTAAAGTGGT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACTATTTATGTCCCCTTTaGGCCAATCTAATCAACAAA +
Preference number: 4 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHYLCPL*ANLINK
Trigger: TTTGTTGATTAGATTGGCCCAAAGGGGACATAAATA...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGAACTGTGAAGGACATTaGTCCCCACGTTACTCAGTG +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERNCEGH*SPRYSV
Trigger: CACTGAGTAACGTGGGGACCAATGTCCTTCACAGTT...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGGTGTATATGACATTTaGCTTGTTTACAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYGVYDI*LVYRGY
Trigger: GTAGCCTCTGTAAACAAGCCAAATGTCATATACACC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGAGTTTCTACAATGACTaGCCCCATACATTTATCTTA +
Preference number: 4 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRSFYND*PHTFIL
Trigger: TAAGATAAATGTATGGGGCCAGTCATTGTAGAAACT...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392799.7
3UTR CAA 72 bp TTTTCTCTATGCCGGTATAACCCACAACCCTTACTGTaGGTCTATCCATATCCTCTATGCAAAATAAGTCAC +
Preference number: 4 (lower is better)
Translates to: FSLCRYNPQPLL*VYPYPLCKISH
Trigger: GTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR CAA 72 bp CTAATGTGGGAAGTTCACACATTCTACAGTAATGCCTaGTCCTCACTGGAGAAGTATTTAAGCTTTACCAAG +
Preference number: 4 (lower is better)
Translates to: LMWEVHTFYSNA*SSLEKYLSFTK
Trigger: CTTGGTAAAGCTTAAATACTTCTCCAGTGAGGACAAGGCATTACTGTAGAATGTGTGAACTTCCCACATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCCTCTGGTATCCAGTATaGAGTACCTTCGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFILWYPV*STFEEI
Trigger: AATTTCTTCGAAGGTACTTCATACTGGATACCAGAG...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTTCTTCACTTGGCTTCTAAGACACAACGTACTCTTGATATCCTGTTGATGTGGAGCATCGCTAACCTTTaGAATGTAGGTAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: FLHLASKTQRTLDILLMWSIANL*NVGKLN
Trigger: ATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCT...CCACATCAACAGGATATCAAGAGTACGTTGTGTCTTAGAAGCCAAGTGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTTTACTTCTTCTTTCTaGGTGGGAGTAATGATGGGT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIFTSSF*VGVMMG
Trigger: ACCCATCATTACTCCCACTCAGAAAGAAGAAGTAAA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACTTTACTTCTTCTTTCTaGGTGGGAGTAATGATGGGT +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNFTSSF*VGVMMG
Trigger: ACCCATCATTACTCCCACTCAGAAAGAAGAAGTAAA...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTATAACCGCACTATCTTaGGGTGGTTTAGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFITALS*GGLGVK
Trigger: CTTTACTCCTAAACCACCTCAAGATAGTGCGGTTAT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATAACCGCACTATCTTaGGGTGGTTTAGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNITALS*GGLGVK
Trigger: CTTTACTCCTAAACCACCTCAAGATAGTGCGGTTAT...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCGCATTCACCAGCTCTTaGTGTATACCTCTGTATACA +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRAFTSS*CIPLYT
Trigger: TGTATACAGAGGTATACATCAAGAGCTGGTGAATGC...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR TCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGTCACAACAATTTCATaGCTAAGGGCAGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGVTTIS*LRAVMS
Trigger: AGACATAACTGCCCTTAGTCATGAAATTGTTGTGAC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATTTGCAAATACTAAAGTaGACATGCAATGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYLQILK*TCNVEA
Trigger: AGCTTCCACATTGCATGTTCACTTTAGTATTTGCAA...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACTCATCACACAAGGGCTaGACCAAACAAAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNSSHKG*TKQNEK
Trigger: TTTCTCATTTTGTTTGGTTCAGCCCTTGTGTGATGA...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATCTTACAGAAAATTCCTaGACTGCAACTAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYLTENS*TATRSE
Trigger: TTCACTTCTAGTTGCAGTTCAGGAATTTTCTGTAAG...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATCAAATGTCAGGGCTTaGAATCTTTCAGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLSNVRA*NLSGKL
Trigger: CAACTTCCCTGAAAGATTTCAAGCCCTGACATTTGA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACTCTAGTTGTTCGGGCTaGAAACCTTGTCATTACCCT +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNSSCSG*KPCHYP
Trigger: AGGGTAATGACAAGGTTTTCAGCCCGAACAACTAGA...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATTTGGATATTTTGAGTTaGAGAACAAAGTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYLDILS*RTKWDL
Trigger: CAGATCCCACTTTGTTCTTCAACTCAAAATATCCAA...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTTGTGTGGGGTGTATATaGCATTTGGCTTGTTTACAG +
Preference number: 4 (lower is better)
Translates to: NGLDTTSKRRYLESLKASCVGCI*HLACLQ
Trigger: CTGTAAACAAGCCAAATGTCATATACACCCCACACA...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGGCTGTGAGTCTGACTaGTTTGGTACTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIGCESD*FGTVIF
Trigger: AAAAATTACAGTACCAAAGCAGTCAGACTCACAGCC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGGCTGTGAGTCTGACTaGTTTGGTACTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGGCESD*FGTVIF
Trigger: AAAAATTACAGTACCAAAGCAGTCAGACTCACAGCC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAAATGGCGCCAGAGACTaGTTTAATCCAACTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLENGARD*FNPTVH
Trigger: ATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATTCTTCTTTTCTCTATaGCGGTATAACCCACAACCC +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLFFFSL*RYNPQP
Trigger: GGGTTGTGGGTTATACCGGCATAGAGAAAAGAAGAA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCTTCTTCTTTTCTCTATaGCGGTATAACCCACAACCC +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRFFFSL*RYNPQP
Trigger: GGGTTGTGGGTTATACCGGCATAGAGAAAAGAAGAA...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTACCTCTGGACTGCACTaGTGTAGTAGGAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFTSGLH*CSRKFF
Trigger: GAAAAATTTCCTACTACAGCAGTGCAGTCCAGAGGT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACTTAAGCTTTACCAAGTaGACCAAGCACTGCACTAGG +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNLSFTK*TKHCTR
Trigger: CCTAGTGCAGTGCTTGGTGCACTTGGTAAAGCTTAA...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGCGAAACACACACACTTaGCTAAAGTCACATACGGCA +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERRNTHT*LKSHTA
Trigger: TGCCGTATGTGACTTTAGGCAAGTGTGTGTGTTTCG...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACTCTCAATTCCAAATTTaGATATCCAACTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNSQFQI*ISNCLP
Trigger: AGGCAGGCAGTTGGATATGCAAATTTGGAATTGAGA...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp ATACTGGTTCAAAGTCATTCCCGGCTGAATTTCAGAGAACAAGGTATGAACATGAAGTTCTGTATATTGTaGTCAGCTCCATGCAAATAC +
Preference number: 4 (lower is better)
Translates to: ILVQSHSRLNFREQGMNMKFCIL*SAPCKY
Trigger: GTATTTGCATGGAGCTGAGCACAATATACAGAACTT...CATGTTCATACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTTGAACCAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCTTACACTACAGGAGATaGAGAACACAGAGGAACATG +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRLHYRR*RTQRNM
Trigger: CATGTTCCTCTGTGTTCTGCATCTCCTGTAGTGTAA...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR CCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTATTCCCACATTCACCATaGCGACTTAGGTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLFPHSP*RLRLSE
Trigger: TTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAA...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTTTCCCACATTCACCATaGCGACTTAGGTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFFPHSP*RLRLSE
Trigger: TTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAA...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACAGTCACTTTGGAAGCTaGTTCTCTTGGAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNSHFGS*FSWRDS
Trigger: ACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTAATCCTCCTCCTTTCTaGGGTCTCAATTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: NGLDTTSKRRYLESLKASNPPPF*GLNLSQ
Trigger: CTGAGATAAATTGAGACCCCAGAAAGGAGGAGGATT...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAACCTGGTATATTTGGCTaGATTACTCTAGCTACACCC +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLEPGIFG*ITLATP
Trigger: GGGTGTAGCTAGAGTAATCCAGCCAAATATACCAGG...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTAAAGGAAGCAGGCTCCTaGACAAGTATGACTGAAATT +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLKEAGS*TSMTEI
Trigger: AATTTCAGTCATACTTGTCCAGGAGCCTGCTTCCTT...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGATATAACCAGAAGGTaGCGCTATTACCACATGAAT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIDITRR*RYYHMN
Trigger: ATTCATGTGGTAATAGCGCCACCTTCTGGTTATATC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCCTGCCATTTCTACTTaGATGTCTGACATGTCAACC +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNPAIST*MSDMST
Trigger: GGTTGACATGTCAGACATCCAAGTAGAAATGGCAGG...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCATCCTGTTGATGTGGTaGTCACACCTTCTCATTCAT +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRILLMW*SHLLIH
Trigger: ATGAATGAGAAGGTGTGACCACCACATCAACAGGAT...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCCTCCTAAATTTAATTTaGATGGCCTCCTGTTACCTG +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGLLNLI*MASCYL
Trigger: CAGGTAACAGGAGGCCATCCAAATTAAATTTAGGAG...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCCTCTGGTATCCAGTATaGAGTACCTTCGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRLWYPV*STFEEI
Trigger: AATTTCTTCGAAGGTACTTCATACTGGATACCAGAG...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATCTCTGGTATCCAGTATaGAGTACCTTCGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNLWYPV*STFEEI
Trigger: AATTTCTTCGAAGGTACTTCATACTGGATACCAGAG...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTACTCTGGTATCCAGTATaGAGTACCTTCGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLLWYPV*STFEEI
Trigger: AATTTCTTCGAAGGTACTTCATACTGGATACCAGAG...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCTTTACTTCTTCTTTCTaGGTGGGAGTAATGATGGGT +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRFTSSF*VGVMMG
Trigger: ACCCATCATTACTCCCACTCAGAAAGAAGAAGTAAA...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATTTTACTTCTTCTTTCTaGGTGGGAGTAATGATGGGT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNFTSSF*VGVMMG
Trigger: ACCCATCATTACTCCCACTCAGAAAGAAGAAGTAAA...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATAGGAAGATGGCTTTGTaGCCGTTTCAGATTATTTCT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNRKMAL*PFQIIS
Trigger: AGAAATAATCTGAAACGGTCACAAAGCCATCTTCCT...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTAGGAAGATGGCTTTGTaGCCGTTTCAGATTATTTCT +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFRKMAL*PFQIIS
Trigger: AGAAATAATCTGAAACGGTCACAAAGCCATCTTCCT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACATAACCGCACTATCTTaGGGTGGTTTAGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNITALS*GGLGVK
Trigger: CTTTACTCCTAAACCACCTCAAGATAGTGCGGTTAT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAATAACCGCACTATCTTaGGGTGGTTTAGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLEITALS*GGLGVK
Trigger: CTTTACTCCTAAACCACCTCAAGATAGTGCGGTTAT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCGGGATGCTCTTTCTATaGTCAGTTGTAAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRGMLFL*SVVSSK
Trigger: CTTACTACTTACAACTGATCATAGAAAGAGCATCCC...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR TCA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTAGTCACAACAATTTCATaGCTAAGGGCAGTTATGTCT +
Preference number: 4 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLVTTIS*LRAVMS
Trigger: AGACATAACTGCCCTTAGTCATGAAATTGTTGTGAC...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGCTGGACAAGTATGACTaGAATTGTTACCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERLDKYD*NCYPGY
Trigger: ATAGCCTGGGTAACAATTTCAGTCATACTTGTCCAG...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATTTTCAAGACTTCTACTaGGACAGTAGAAGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNFQDFY*DSRSSV
Trigger: CACACTACTTCTACTGTCTCAGTAGAAGTCTTGAAA...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTCATTTTGGTGAGAATTaGAGGTGTGGAATTAACAGG +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPHFGEN*RCGINR
Trigger: CCTGTTAATTCCACACCTTCAATTCTCACCAAAATG...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGGCTGTGAGTCTGACTaGTTTGGTACTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNGCESD*FGTVIF
Trigger: AAAAATTACAGTACCAAAGCAGTCAGACTCACAGCC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGCTTTAATCCAACTGTaGATCTCTTCAGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNALIQL*ISSGLS
Trigger: TGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGACCTCTGGACTGCACTaGTGTAGTAGGAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERTSGLH*CSRKFF
Trigger: GAAAAATTTCCTACTACAGCAGTGCAGTCCAGAGGT...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACACCTCTGGACTGCACTaGTGTAGTAGGAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNTSGLH*CSRKFF
Trigger: GAAAAATTTCCTACTACAGCAGTGCAGTCCAGAGGT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATTTTCTCCAGTCCTCTTaGAGCAAAATGCCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNFLQSS*SKMPQK
Trigger: TTTTTGAGGCATTTTGCTGCAAGAGGACTGGAGAAA...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGTGGGTTTTCAGTGCTaGTCAGAATATCCTAAATGT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNVGFQC*SEYPKC
Trigger: ACATTTAGGATATTCTGAGCAGCACTGAAAACCCAC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATGAACCTCTTTAAGTaGTATTACACGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIMNLFK*YYTKRF
Trigger: GAACCTCTTCGTGTAATACCACTTAAAGAGGTTCAT...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGTTTAACAGTAAATGTTaGGAGGCACACATATATTCC +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKFNSKC*EAHIYS
Trigger: GGAATATATGTGTGCCTCCCAACATTTACTGTTAAA...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCCCAACAATGATCGACTaGATTAAGAAAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRPTMID*IKKMWH
Trigger: GTGCCACATTTTCTTAATCCAGTCGATCATTGTTGG...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGTTCTTTTTGCTTACATaGATGTTCTACAATAGGGTG +
Preference number: 4 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKFFLLT*MFYNRV
Trigger: CACCCTATTGTAGAACATCCATGTAAGCAAAAAGAA...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCAATATTAGGAGACCCTaGCAATCACCAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRNIRRP*QSPEHF
Trigger: AAAATGTTCTGGTGATTGTCAGGGTCTCCTAATATT...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTAATATTAGGAGACCCTaGCAATCACCAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPNIRRP*QSPEHF
Trigger: AAAATGTTCTGGTGATTGTCAGGGTCTCCTAATATT...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATCAACCCAGAGAACAGTaGAAAATAATGAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNQPREQ*KIMNCS
Trigger: AGAACAGTTCATTATTTTTCACTGTTCTCTGGGTTG...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR GCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAACTAGAAAACCACAAATaGGATTCTGACGATCCACAT +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLELENHK*DSDDPH
Trigger: ATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAG...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCTAGAAAACCACAAATaGGATTCTGACGATCCACAT +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNLENHK*DSDDPH
Trigger: ATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAG...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCCAGAACATTTTCCTATaGTATCGAACAAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: RGSIIYALKTISPFIIFGQNIFL*YRTRIV
Trigger: AACTATCCTTGTTCGATAGCATAGGAAAATGTTCTG...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTCACCTTACTTGCAGTTaGGAATTTTGTTTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPHLTCS*EFCFLV
Trigger: AACTAGGAAACAAAATTCGCAACTGCAAGTAAGGTG...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCAGACACACACCACCATaGCTAATTCTTTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: VHLRGSIIYALKTISPFIRHTPP*LILFEF
Trigger: AAATTCAAAAAGAATTAGGCATGGTGGTGTGTGTCT...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGGTGATATGGTTAGTTaGATCAAACAACAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNGDMVS*IKQQRL
Trigger: TAGCCTTTGTTGTTTGATGCAACTAACCATATCACC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATAGTACTTACTCAAACTaGTCTATAATTCAACGTCGG +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNSTYSN*SIIQRR
Trigger: CCGACGTTGAATTATAGACCAGTTTGAGTAAGTACT...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCAGTACTTACTCAAACTaGTCTATAATTCAACGTCGG +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRSTYSN*SIIQRR
Trigger: CCGACGTTGAATTATAGACCAGTTTGAGTAAGTACT...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACTTTAACAGTAAATGTTaGGAGGCACACATATATTCC +
Preference number: 4 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNFNSKC*EAHIYS
Trigger: GGAATATATGTGTGCCTCCCAACATTTACTGTTAAA...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTAGCTCAGAGTTTAGTTaGTGTTTATATGTGGTAACC +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFSSEFS*CLYVVT
Trigger: GGTTACCACATATAAACACCAACTAAACTCTGAGCT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR TCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAAGCATCGCTAACCTTTaGAATGTAGGTAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLESIANL*NVGKLN
Trigger: ATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGTTGCAAATACTAAAGTaGACATGCAATGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERLQILK*TCNVEA
Trigger: AGCTTCCACATTGCATGTTCACTTTAGTATTTGCAA...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR TCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGAATATTAGGAGACCCTaGCAATCACCAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERNIRRP*QSPEHF
Trigger: AAAATGTTCTGGTGATTGTCAGGGTCTCCTAATATT...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCATCATTATGTCGCTTTaGTTACATTCCTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRIIMSL*LHSWTL
Trigger: TAAAGTCCAGGAATGTAAGCAAAGCGACATAATGAT...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATCATTATGTCGCTTTaGTTACATTCCTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNIIMSL*LHSWTL
Trigger: TAAAGTCCAGGAATGTAAGCAAAGCGACATAATGAT...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTCAGAACATTTTCCTATaGTATCGAACAAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFQNIFL*YRTRIV
Trigger: AACTATCCTTGTTCGATAGCATAGGAAAATGTTCTG...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTAAACCTCAAGGTCCTTaGATTCTAGGACAATGTATT +
Preference number: 4 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSKPQGP*ILGQCI
Trigger: AATACATTGTCCTAGAATGCAAGGACCTTGAGGTTT...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGGTTTTCCTTTTCAGTTaGCAGAAAGCTCAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERVFLFS*QKAQSL
Trigger: TAAACTCTGAGCTTTCTGGCAACTGAAAAGGAAAAC...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACAATTTTCAACCAAGGTaGCAAGGCAATTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNNFQPR*QGNFVE
Trigger: CTCTACAAAATTGCCTTGGCACCTTGGTTGAAAATT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS-3UTR CCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACATGAACCTCTTTAAGTaGTATTACACGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNMNLFK*YYTKRF
Trigger: GAACCTCTTCGTGTAATACCACTTAAAGAGGTTCAT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAATGAACCTCTTTAAGTaGTATTACACGAAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLEMNLFK*YYTKRF
Trigger: GAACCTCTTCGTGTAATACCACTTAAAGAGGTTCAT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CCA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGAGTACTTACTCAAACTaGTCTATAATTCAACGTCGG +
Preference number: 4 (lower is better)
Translates to: LLKLVYNSTSETKDSLERSTYSN*SIIQRR
Trigger: CCGACGTTGAATTATAGACCAGTTTGAGTAAGTACT...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CCA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAAGTACTTACTCAAACTaGTCTATAATTCAACGTCGG +
Preference number: 4 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLESTYSN*SIIQRR
Trigger: CCGACGTTGAATTATAGACCAGTTTGAGTAAGTACT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
3UTR CAA 72 bp TTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATaGAAGGCAAGTTGCTTTAAGGAAAGAATATTCCAG +
Preference number: 4 (lower is better)
Translates to: LDTTSKRRYLES*KASCFKERIFQ
Trigger: CTGGAATATTCTTTCCTTAAAGCAACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp AAAGGCTATTCTAGAACTCAACGTTTTCCTTTTCAGTaGCCAGAAAGCTCAGAGTTTAGTTGGTGTTTATAT +
Preference number: 4 (lower is better)
Translates to: KGYSRTQRFPFQ*PESSEFSWCLY
Trigger: ATATAAACACCAACTAAACTCTGAGCTTTCTGGCAACTGAAAAGGAAAACGTTGAGTTCTAGAATAGCCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
3UTR CAA 72 bp CATCCAGTTTCAAAGCCTTCAATAGCACCGAATACTTaGAAGACTCCCACATTTTTATTTCCAATAATGATT +
Preference number: 4 (lower is better)
Translates to: HPVSKPSIAPNT*KTPTFLFPIMI
Trigger: AATCATTATTGGAAATAAAAATGTGGGAGTCTTCAAAGTATTCGGTGCTATTGAAGGCTTTGAAACTGGATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACATCATTATGTCGCTTTaGTTACATTCCTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNIIMSL*LHSWTL
Trigger: TAAAGTCCAGGAATGTAAGCAAAGCGACATAATGAT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR GCA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCAGAACATTTTCCTATaGTATCGAACAAGGATAGTT +
Preference number: 4 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNQNIFL*YRTRIV
Trigger: AACTATCCTTGTTCGATAGCATAGGAAAATGTTCTG...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS GCA 90 bp AAAGGAATTCAATCAGCAAGAGCCAGACAGCACCCACCGCCCCTCTaGGGACGCCTCCCCGCTCGCCACAGCGGGAACCGCGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KGIQSARARQHPPPL*GRLPARHSGNRAPA
Trigger: TGCTGGAGCGCGGTTCCCGCTGTGGCGAGCGGGGAGGCGTCCGCAGAGGGGCGGTGGGTGCTGTCTGGCTCTTGCTGATTGAATTCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463663.6
CDS-3UTR CAA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCTTGAAGTTCCCTGGCTaGACCTTGGCAAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLLKFPG*TLARDS
Trigger: CGAGTCTCTTGCCAAGGTCAAGCCAGGGAACTTCAA...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS GCA 90 bp CGCAGATCTGCCGGGACCCCGCTGTGCTACAATGGCGCCAGAGACTaGTTTAATCCAACTGTGCATCTCTTCAGGGCTATCAGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: RRSAGTPLCYNGARD*FNPTVHLFRAISLH
Trigger: GTGCAGGCTGATAGCCCTGAAGAGATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGATCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS GCA 90 bp TCTGGCCTGCCGCATAGAAGACGCAGATCTGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGACTGCTTTAATCCAACTGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: SGLPHRRRRSAGTPL*YNGARDCFNPTVHL
Trigger: GAGATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTATGCGGCAGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR CAA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACGGACGGAAAGCGTGTTaGGATTCTGAAGGACCGGGG +
Preference number: 5 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHGRKAC*DSEGPG
Trigger: CCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTCC...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCCCTGGCTTGACCGGACGGAAAGCGTGTTaGGATTCTGAAGGACCGGGG +
Preference number: 5 (lower is better)
Translates to: EAGSLGETVWTLKFPGLTGRKAC*DSEGPG
Trigger: CCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTCC...GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS TCA 90 bp CCAGCCCAGTCAAGCCTTCAGATGACTCTCATTCCAGCTGCCATCTaGCTGCAACTACAAGAGAGAGACCCCCAAGATGGAGCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: PAQSSLQMTLIPAAI*LQLQERDPQDGAAQ
Trigger: TTGGGCAGCTCCATCTTGGGGGTCTCTCTCTTGTAGTTGCAGTCAGATGGCAGCTGGAATGAGAGTCATCTGAAGGCTTGACTGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS CCA 90 bp CTGATGCCGGTGTCTTCTGGATTTTACCCAAAGGTACTGTGCATATaGCAAGCAGTCAACTACAGCACAGCTGCAGCCTGGCTGCCCCTC +
Preference number: 5 (lower is better)
Translates to: LMPVSSGFYPKVLCI*QAVNYSTAAAWLPL
Trigger: GAGGGGCAGCCAGGCTGCAGCTGTGCTGTAGTTGACTGCTTGCCATATGCACAGTACCTTTGGGTAAAATCCAGAAGACACCGGCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCATGGAAGCTGGTTCTCTaGGAGAGACAGTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: DPLTSARNASRWDYRHTPWKLVL*ERQSGP
Trigger: AGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCA...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GAGGCAGGCAGGCTCCGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCATGAGTTTAGGTATCTaGGTCTGGCAATATTTCATG +
Preference number: 5 (lower is better)
Translates to: EAGRLRALLPHTSLTGRLMSLGI*VWQYFM
Trigger: CATGAAATATTGCCAGACCAAGATACCTAAACTCAT...GAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACGGAGCCTGCCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR CAA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTCCACAACCCTTACTGTaGGTCTATCCATATCCTCTA +
Preference number: 5 (lower is better)
Translates to: RALLPHTSLTGRLASSKSPQPLL*VYPYPL
Trigger: TAGAGGATATGGATAGACCAACAGTAAGGGTTGTGG...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR CAA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTGATAACCGCACTATCTaGAGGTGGTTTAGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: RALLPHTSLTGRLASSKSDNRTI*RWFRSK
Trigger: TTTACTCCTAAACCACCTCAAGATAGTGCGGTTATC...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR CAA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTCCACTCCCTAGATTCTaGGTTTACCAGCTTATAAAG +
Preference number: 5 (lower is better)
Translates to: RALLPHTSLTGRLASSKSPLPRF*VYQLIK
Trigger: CTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGG...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR CAA 90 bp CACAACTGTTTGAACCCACGAGGTGGAGGCTGTAGTGAGCTGAGATCACGCCACCCGAAACACACACACTaGCCTAAAGTCACATACGGC +
Preference number: 5 (lower is better)
Translates to: HNCLNPRGGGCSELRSRHPKHTH*PKVTYG
Trigger: GCCGTATGTGACTTTAGGCAAGTGTGTGTGTTTCGG...GTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTTCAAACAGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS TCA 90 bp CACGTTTGCGTGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTaGTGTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: HVCVRAHIRAAFTSS*CIPLYTRVRQPSGL
Trigger: CAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS GCA 90 bp GGGCCCTCCACTAAGAAGGCACGTTTGCGTGAGAGCCCACATACGTaGTGCATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGT +
Preference number: 5 (lower is better)
Translates to: GPSTKKARLRESPHT*CIHQLLMYTSVYKG
Trigger: ACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTGCCTTCTTAGTGGAGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CAA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGTGGCGGTGGCTGCGTaGGTAGGACGGAAAGCGTGT +
Preference number: 5 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRVAVAA*VGRKAC
Trigger: ACACGCTTTCCGTCCTACCAACGCAGCCACCGCCAC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CTGCCCACCCGGAGATTAAGATGCCCTCTGCTTTCCGCCTTACATCATGCCGTCCTCTCAATTCCAAATTaGCATATCCAACTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LPTRRLRCPLLSALHHAVLSIPN*HIQLPA
Trigger: GGCAGGCAGTTGGATATGCAAATTTGGAATTGAGAG...GACGGCATGATGTAAGGCGGAAAGCAGAGGGCATCTTAATCTCCGGGTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS GCA 90 bp CCCTCCACTAAGAAGGCACGTTTGCGTGAGAGCCCACATACGTGCTaGATTCACCAGCTCTTGATGTATACCTCTGTATACAAGGGTTCG +
Preference number: 5 (lower is better)
Translates to: PSTKKARLRESPHTC*IHQLLMYTSVYKGS
Trigger: CGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTGCCTTCTTAGTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CAA 90 bp CGTGCGCTTCTGCCTCACACGTCACTGACCGGAAGGCTCGCATCGTCCAAGTCTATGAGTTTAGGTATCTaGGTCTGGCAATATTTCATG +
Preference number: 5 (lower is better)
Translates to: RALLPHTSLTGRLASSKSMSLGI*VWQYFM
Trigger: CATGAAATATTGCCAGACCAAGATACCTAAACTCAT...AGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAGCGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS-3UTR CAA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCAGGAAGCTATGGGTGTTaGAGTCAGAAGGAAATCATC +
Preference number: 5 (lower is better)
Translates to: DPLTSARNASRWDYRHTPGSYGC*SQKEII
Trigger: GATGATTTCCTTCTGACTCAAACACCCATAGCTTCC...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS TCA 90 bp AGTGAAGAGGCTATCTTGACCATCCAGCCCAGTCAAGCCTTCAGATaGCTCTCATTCCAGCTGCCATCTGACTGCAACTACAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SEEAILTIQPSQAFR*LSFQLPSDCNYKRE
Trigger: CTCTCTCTTGTAGTTGCAGTCAGATGGCAGCTGGAATGAGAGTCATCTGAAGGCTTGACTGGGCTGGATGGTCAAGATAGCCTCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS TCA 90 bp CCTGAGATTTCCTCCCAAGCTGCCAGCACCCTTTTCTGCACATGCTaGTGCCGGTGTCTTCTGGATTTTACCCAAAGGTACTGTGCATAT +
Preference number: 5 (lower is better)
Translates to: PEISSQAASTLFCTC*CRCLLDFTQRYCAY
Trigger: ATATGCACAGTACCTTTGGGTAAAATCCAGAAGACACCGGCATCAGCATGTGCAGAAAAGGGTGCTGGCAGCTTGGGAGGAAATCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CCA 90 bp TTCCCCGACGGACCCACGTACCAGTATGCACAGCATCTCCTTTTCTaGAATGTCACTTTGATATACAAGGCAGCAGAGCAAGTGCACATC +
Preference number: 5 (lower is better)
Translates to: FPDGPTYQYAQHLLF*NVTLIYKAAEQVHI
Trigger: GATGTGCACTTGCTCTGCTGCCTTGTATATCAAAGTGACATTCCAGAAAAGGAGATGCTGTGCATACTGGTACGTGGGTCCGTCGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGGACGGAAAGCGTGTTaGGATTCTGAAGGACCGGGG +
Preference number: 5 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRGRKAC*DSEGPG
Trigger: CCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTCC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGTGGCGGTGGCTGCGTaGGTAGGACGGAAAGCGTGT +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYVAVAA*VGRKAC
Trigger: ACACGCTTTCCGTCCTACCAACGCAGCCACCGCCAC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCCACAACCCTTACTGTaGGTCTATCCATATCCTCTA +
Preference number: 5 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVPQPLL*VYPYPL
Trigger: TAGAGGATATGGATAGACCAACAGTAAGGGTTGTGG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS GCA 90 bp ACATTACACTACAGGAGATGCAGAACACAGAGGAACATGCTAAACTaGACCAAAGGAATTCAATCAGCAAGAGCCAGACAGCACCCACCG +
Preference number: 5 (lower is better)
Translates to: TLHYRRCRTQRNMLN*TKGIQSARARQHPP
Trigger: CGGTGGGTGCTGTCTGGCTCTTGCTGATTGAATTCCTTTGGTGCAGTTTAGCATGTTCCTCTGTGTTCTGCATCTCCTGTAGTGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463663.6
CDS-3UTR CAA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGTGGCGGTGGCTGCGTaGGTAGGACGGAAAGCGTGT +
Preference number: 5 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNVAVAA*VGRKAC
Trigger: ACACGCTTTCCGTCCTACCAACGCAGCCACCGCCAC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATGTTGAGACCAAAGAGTaGCTGCGAGAGGCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LYAGITHNPYCWSIHILYVETKE*LREAVE
Trigger: TTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAAC...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGTTGAAGTTCCCTGGCTaGACCTTGGCAAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRLKFPG*TLARDS
Trigger: CGAGTCTCTTGCCAAGGTCAAGCCAGGGAACTTCAA...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATTGGAAGCTGGTTCTCTaGGAGAGACAGTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: LYAGITHNPYCWSIHILYWKLVL*ERQSGP
Trigger: AGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCA...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TCAGTCACTTTGGAAGCTGGTTCTCTTGGAGAGACAGTCTGGACCTTGAAGTTCGCTTGTTCAGTCACTTaGGAAGCTGGTTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: SVTLEAGSLGETVWTLKFACSVT*EAGSLG
Trigger: TCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGC...GAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CAA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACAACACAGCTACATATTaGGAGCAGCATCAACAAGAC +
Preference number: 5 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHNTATY*EQHQQD
Trigger: GTCTTGTTGATGCTGCTCCAAATATGTAGCTGTGTT...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGACCACTAGAGCAAGCTaGTCCAACCCACAGCCCACG +
Preference number: 5 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKTTRAS*SNPQPT
Trigger: CGTGGGCTGTGGGTTGGACAAGCTTGCTCTAGTGGT...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GATCCTCTCACCTCAGCACGCAATGCAAGTCGCTGGGACTACAGACACACACCATATATGACATTTGGCTaGTTTACAGAGGCTACAGAT +
Preference number: 5 (lower is better)
Translates to: DPLTSARNASRWDYRHTPYMTFG*FTEATD
Trigger: ATCTGTAGCCTCTGTAAACAAGCCAAATGTCATATA...TGGTGTGTGTCTGTAGTCCCAGCGACTTGCATTGCGTGCTGAGGTGAGAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS TCA 90 bp GACTGCAACTACAAGAGAGAGACCCCCAAGATGGAGCTGCCCAAATaGGCTCCTTCAACCCAGAGAACAGTGAAAAATAATGAACTGTTC +
Preference number: 5 (lower is better)
Translates to: DCNYKRETPKMELPK*APSTQRTVKNNELF
Trigger: GAACAGTTCATTATTTTTCACTGTTCTCTGGGTTGAAGGAGCTCATTTGGGCAGCTCCATCTTGGGGGTCTCTCTCTTGTAGTTGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS TCA 90 bp AAGAGTGTTGGTGATGCAGTATTTAAGAATGTTTCATGGTGTCCCTaGGATTTCCTCCCAAGCTGCCAGCACCCTTTTCTGCACATGCTG +
Preference number: 5 (lower is better)
Translates to: KSVGDAVFKNVSWCP*DFLPSCQHPFLHML
Trigger: CAGCATGTGCAGAAAAGGGTGCTGGCAGCTTGGGAGGAAATCTCAGGGACACCATGAAACATTCTTAAATACTGCATCACCAACACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGGACGGAAAGCGTGTTaGGATTCTGAAGGACCGGGG +
Preference number: 5 (lower is better)
Translates to: RGSIIYALKTISPFIIFGGRKAC*DSEGPG
Trigger: CCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTCC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGTGGCGGTGGCTGCGTaGGTAGGACGGAAAGCGTGT +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNVAVAA*VGRKAC
Trigger: ACACGCTTTCCGTCCTACCAACGCAGCCACCGCCAC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp ATGGTCAGTATCAGCAGTGGAAGCCAGGGAGGCTCCGTGTCACATGGAAAAGTGCTGTTAACAGAACTTTaGATAAAGGTACAAGCACCA +
Preference number: 5 (lower is better)
Translates to: MVSISSGSQGGSVSHGKVLLTEL*IKVQAP
Trigger: TGGTGCTTGTACCTTTATCAAAAGTTCTGTTAACAG...CACTTTTCCATGTGACACGGAGCCTCCCTGGCTTCCACTGCTGATACTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACCAAAAGAGCACCAGGTaGAGAGGATTTCCTAGCGGA +
Preference number: 5 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHQKSTR*RGFPSG
Trigger: TCCGCTAGGAAATCCTCTCAACCTGGTGCTCTTTTG...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS TCA 90 bp GTGCTGAGATTCAGTTTATACACTTTTGACAGGAAGCCACAGACATaGCACTGTTCTTCTCAGTGGACCACTATTAGGAGGTACACACCC +
Preference number: 5 (lower is better)
Translates to: VLRFSLYTFDRKPQT*HCSSQWTTIRRYTP
Trigger: GGGTGTGTACCTCCTAATAGTGGTCCACTGAGAAGAACAGTGTCATGTCTGTGGCTTCCTGTCAAAAGTGTATAAACTGAATCTCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 90 bp CTGGGTTTGCCTGTTATTCGTGCTGAGATTCAGTTTATACACTTTTaGCAGGAAGCCACAGACATGACACTGTTCTTCTCAGTGGACCAC +
Preference number: 5 (lower is better)
Translates to: LGLPVIRAEIQFIHF*QEATDMTLFFSVDH
Trigger: GTGGTCCACTGAGAAGAACAGTGTCATGTCTGTGGCTTCCTGTCAAAAGTGTATAAACTGAATCTCAGCACGAATAACAGGCAAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CCA 90 bp TGTAACTCTTCCAAGCCCAACTGCTGTGCTCTAGACCCTGTTTATTaGCACACTTACTATTGGCTTACAGCTCTTTGCTGTTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: CNSSKPNCCALDPVY*HTYYWLTALCCFLP
Trigger: GGGAAGAAAACAGCAAAGAGCTGTAAGCCAATAGTAAGTGTGCCAATAAACAGGGTCTAGAGCACAGCAGTTGGGCTTGGAAGAGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CCA 90 bp TTTGTTTACAGAATGGCATTTACAGTTGCTTTTGGGCAGGGTGGGTaGGGATTTGCCAATCTCTTAACTCAGCCACAACCTTCTCATGAC +
Preference number: 5 (lower is better)
Translates to: FVYRMAFTVAFGQGG*GFANLLTQPQPSHD
Trigger: GTCATGAGAAGGTTGTGGCTGAGTTAAGAGATTGGCAAATCCCCACCCACCCTGCCCAAAAGCAACTGTAAATGCCATTCTGTAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp ACAGTAAATGTTGGGAGGCACACATATATTCCCATTCTGAAAGAAGACATGTTAGGACGGAAAGCGTGTTaGGATTCTGAAGGACCGGGG +
Preference number: 5 (lower is better)
Translates to: TVNVGRHTYIPILKEDMLGRKAC*DSEGPG
Trigger: CCCCGGTCCTTCAGAATCCAAACACGCTTTCCGTCC...TAACATGTCTTCTTTCAGAATGGGAATATATGTGTGCCTCCCAACATTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGTTGAGACCAAAGAGTaGCTGCGAGAGGCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYVETKE*LREAVE
Trigger: TTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAAC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIETVWT*KFPGLT
Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp AGGCGCCAGGATGCCGGGTCTAAGACAGCCATTATATTCAGACCAATGAGACACATGAGTTTAGGTATCTaGGTCTGGCAATATTTCATG +
Preference number: 5 (lower is better)
Translates to: RRQDAGSKTAIIFRPMRHMSLGI*VWQYFM
Trigger: CATGAAATATTGCCAGACCAAGATACCTAAACTCAT...GTGTCTCATTGGTCTGAATATAATGGCTGTCTTAGACCCGGCATCCTGGCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATACCCGACATAGTTTTTaGAGTGCATCTCAACTGCCC +
Preference number: 5 (lower is better)
Translates to: LYAGITHNPYCWSIHILYTRHSF*SASQLP
Trigger: GGGCAGTTGAGATGCACTCAAAAAACTATGTCGGGT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGTTGAGACCAAAGAGTaGCTGCGAGAGGCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIVETKE*LREAVE
Trigger: TTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAAC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTTGAAGTTCCCTGGCTaGACCTTGGCAAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFILKFPG*TLARDS
Trigger: CGAGTCTCTTGCCAAGGTCAAGCCAGGGAACTTCAA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTTGAAGTTCCCTGGCTaGACCTTGGCAAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: RGSIIYALKTISPFIIFGLKFPG*TLARDS
Trigger: CGAGTCTCTTGCCAAGGTCAAGCCAGGGAACTTCAA...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRETVWT*KFPGLT
Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFETVWT*KFPGLT
Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNETVWT*KFPGLT
Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTGGAAGCTGGTTCTCTaGGAGAGACAGTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: RGSIIYALKTISPFIIFGWKLVL*ERQSGP
Trigger: AGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCA...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCTGGAAGCTGGTTCTCTaGGAGAGACAGTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIWKLVL*ERQSGP
Trigger: AGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCA...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTCTAAGCCTATGTGTTTaGGAGAGGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFLSLCV*ERRCGM
Trigger: CATTCCGCACCTCCTCTCCAAAACACATAGGCTTAG...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATCACCTCCTCAAGGACTaGTTCCAACAATTCTGTACT +
Preference number: 5 (lower is better)
Translates to: LYAGITHNPYCWSIHILYHLLKD*FQQFCT
Trigger: AGTACAGAATTGTTGGAACAAGTCCTTGAGGAGGTG...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCAGCCTGAGAAATGCCTaGGCCTCCCAAAATGCTAGG +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFISLRNA*ASQNAR
Trigger: CCTAGCATTTTGGGAGGCCAAGGCATTTCTCAGGCT...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGTGTTTCATGTTCAGTaGGTCAGAGCCGGTTCATGC +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYVFHVQ*VRAGSC
Trigger: GCATGAACCGGCTCTGACCAACTGAACATGAAACAC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS TCA 90 bp GTGCACCAGGTTCATGGAGAGCTCAATGAATGTCTGCTGCATGAATaGCTCTTCCCGGGAGTATTGGCTTTAAATAAAATCTATGAGACA +
Preference number: 5 (lower is better)
Translates to: VHQVHGELNECLLHE*LFPGVLALNKIYET
Trigger: TGTCTCATAGATTTTATTTAAAGCCAATACTCCCGGGAAGAGTCATTCATGCAGCAGACATTCATTGAGCTCTCCATGAACCTGGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTACTAAGAAGGCACGTTaGCGTGAGAGCCCACATACG +
Preference number: 5 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFTKKAR*RESPHT
Trigger: CGTATGTGGGCTCTCACGCAAACGTGCCTTCTTAGT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CAA 90 bp TTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCGTTGAGACCAAAGAGTaGCTGCGAGAGGCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: FLVYQLIKSTPKRQYNIRVETKE*LREAVE
Trigger: TTCCACAGCCTCTCGCAGCAACTCTTTGGTCTCAAC...GCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGAGACAGTCTGGACCTaGAAGTTCCCTGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNETVWT*KFPGLT
Trigger: GGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATGCTTGTTCAGTCACTTaGGAAGCTGGTTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYACSVT*EAGSLG
Trigger: TCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGC...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCCACTCCCTAGATTCTaGGTTTACCAGCTTATAAAG +
Preference number: 5 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRPLPRF*VYQLIK
Trigger: CTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGG...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TGGCCACTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGGAACTGTTCTGCATCTaGACTGTATCAGTGTCAGTA +
Preference number: 5 (lower is better)
Translates to: WPLPRFLVYQLIKSTPKRELFCI*TVSVSV
Trigger: TACTGACACTGATACAGTCAAGATGCAGAACAGTTC...CCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTAAGAAACAGACGCCATaGGGACCAAAGGCCCTATTT +
Preference number: 5 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFKKQTP*GPKALF
Trigger: AAATAGGGCCTTTGGTCCCAATGGCGTCTGTTTCTT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GCCTCCTGTTACCTGAGTACTACCACTTTAATCTGGTGGTATGTTTGTGATCACCTTTCCCCACCTTACTaGCAGTTGCGAATTTTGTTT +
Preference number: 5 (lower is better)
Translates to: ASCYLSTTTLIWWYVCDHLSPPY*QLRILF
Trigger: AAACAAAATTCGCAACTGCAAGTAAGGTGGGGAAAG...GTGATCACAAACATACCACCAGATTAAAGTGGTAGTACTCAGGTAACAGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTAGGGAATCCAGTGTTTaGGGGTCACCAAGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFRESSV*GSPRLV
Trigger: CACAAGCCTTGGTGACCCCAAAACACTGGATTCCCT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAATGGAAGCTGGTTCTCTaGGAGAGACAGTCTGGACCT +
Preference number: 5 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLEWKLVL*ERQSGP
Trigger: AGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCA...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCGCTTGTTCAGTCACTTaGGAAGCTGGTTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: RGSIIYALKTISPFIIFGACSVT*EAGSLG
Trigger: TCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGC...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTAAGGCATTTCTGAGCTaGAACATTACACGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPKAFLS*NITRGL
Trigger: GAGGCCGCGTGTAATGTTCAAGCTCAGAAATGCCTT...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATTTATCTCAGTTAGCATaGATGGTGGGGGCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PRFLVYQLIKSTPKRQYNLSQLA*MVGAWP
Trigger: AGGCCAAGCCCCCACCATCAATGCTAACTGAGATAA...ATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATCTTCATTTTCTTCACTaGGCTTCTAAGACACAACGT +
Preference number: 5 (lower is better)
Translates to: LYAGITHNPYCWSIHILYLHFLH*ASKTQR
Trigger: ACGTTGTGTCTTAGAAGCCAAGTGAAGAAAATGAAG...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp AGTGTCCCCTGTAGCACAATCCACATCATAAAAGATTCCAAACATTTAATACCTGAGGAAATGAGGAGGTaGTCAATGGCACACCCTCAA +
Preference number: 5 (lower is better)
Translates to: SVPCSTIHIIKDSKHLIPEEMRR*SMAHPQ
Trigger: TTGAGGGTGTGCCATTGACAACCTCCTCATTTCCTC...AGGTATTAAATGTTTGGAATCTTTTATGATGTGGATTGTGCTACAGGGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGTGGGGTCACCAAGGCTaGTGTGATGGGAAAGATGAG +
Preference number: 5 (lower is better)
Translates to: LLKLVYNSTSETKDSLERWGHQG*CDGKDE
Trigger: CTCATCTTTCCCATCACACAAGCCTTGGTGACCCCA...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCAAGGCATTTCTGAGCTaGAACATTACACCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIKAFLS*NITPCS
Trigger: GGAGCAGGGTGTAATGTTCAAGCTCAGAAATGCCTT...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368989.6
CDS TCA 90 bp CACACTTTCCCCAACCCTACAACACATGTACTACTATTCATGTGCTaGAACTGCAGATTAGACATGTTAAGTATCTCACCCAAGGTTACA +
Preference number: 5 (lower is better)
Translates to: HTFPNPTTHVLLFMC*NCRLDMLSISPKVT
Trigger: TGTAACCTTGGGTGAGATACTTAACATGTCTAATCTGCAGTTTCAGCACATGAATAGTAGTACATGTGTTGTAGGGTTGGGGAAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp CAACCCTTACTGTTGGTCTATCCATATCCTCTATGCAAAATAAGTCACCTCAAGGATAACCGCACTATCTaGAGGTGGTTTAGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: QPLLLVYPYPLCKISHLKDNRTI*RWFRSK
Trigger: TTTACTCCTAAACCACCTCAAGATAGTGCGGTTATC...CTTGAGGTGACTTATTTTGCATAGAGGATATGGATAGACCAACAGTAAGGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATTGCATTCACCAGCTCTaGATGTATACCTCTGTATAC +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYCIHQL*MYTSVY
Trigger: GTATACAGAGGTATACATCAAGAGCTGGTGAATGCA...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCCCACAACCCTTACTGTaGGTCTATCCATATCCTCTA +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIPQPLL*VYPYPL
Trigger: TAGAGGATATGGATAGACCAACAGTAAGGGTTGTGG...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TTACTCAAACTGGTCTATAATTCAACGTCGGAAACTAAAGATTCTTTAGAGAGGACCAATAGGGAACGTTaGCAAGGAGCAGCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: LLKLVYNSTSETKDSLERTNRER*QGAASN
Trigger: GTTAGAGGCTGCTCCTTGCAAACGTTCCCTATTGGT...CCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATACATTCACAAGTCACTaGATTCAACAGAGATCTGAA +
Preference number: 5 (lower is better)
Translates to: LYAGITHNPYCWSIHILYTFTSH*IQQRSE
Trigger: TTCAGATCTCTGTTGAATCAAGTGACTTGTGAATGT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATCAAACCTCAAGGTCCTaGCATTCTAGGACAATGTAT +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYQTSRS*HSRTMY
Trigger: ATACATTGTCCTAGAATGCAAGGACCTTGAGGTTTG...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAAGAAAAGACTACTTTaGCTACTAGCAACCGTCACC +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYKKRLL*LLATVT
Trigger: GGTGACGGTTGCTAGTAGCAAAAGTAGTCTTTTCTT...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCTATGCCGGTATAACCCACAACCCTTACTGTTGGTCTATCCATATCCTCTATATGTTTGTGATCACATaGCTTCCAGGTAAAAATCAG +
Preference number: 5 (lower is better)
Translates to: LYAGITHNPYCWSIHILYMFVIT*LPGKNQ
Trigger: CTGATTTTTACCTGGAAGCAATGTGATCACAAACAT...ATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp TTAACCAAACACACCCCTAATCATTGTATTTACTTCATCACACAAGGGCTGAACGATAACCGCACTATCTaGAGGTGGTTTAGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: LTKHTPNHCIYFITQGLNDNRTI*RWFRSK
Trigger: TTTACTCCTAAACCACCTCAAGATAGTGCGGTTATC...GTTCAGCCCTTGTGTGATGAAGTAAATACAATGATTAGGGGTGTGTTTGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCGATAACCGCACTATCTaGAGGTGGTTTAGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIDNRTI*RWFRSK
Trigger: TTTACTCCTAAACCACCTCAAGATAGTGCGGTTATC...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAGCTTGTTCAGTCACTTaGGAAGCTGGTTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLEACSVT*EAGSLG
Trigger: TCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGC...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGCTTGTTCAGTCACTTaGGAAGCTGGTTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNACSVT*EAGSLG
Trigger: TCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCCCACTCCCTAGATTCTaGGTTTACCAGCTTATAAAG +
Preference number: 5 (lower is better)
Translates to: RGSIIYALKTISPFIIFGPLPRF*VYQLIK
Trigger: CTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGG...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCCCACTCCCTAGATTCTaGGTTTACCAGCTTATAAAG +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIPLPRF*VYQLIK
Trigger: CTTTATAAGCTGGTAAACCAAGAATCTAGGGAGTGG...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp ATACTGGTTCAAAGTCATTCCCGGCTGAATTTCAGAGAACAAGGTATGAACATGATCAAATGTCAGGGCTaGAAATCTTTCAGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: ILVQSHSRLNFREQGMNMIKCQG*KSFREV
Trigger: AACTTCCCTGAAAGATTTCAAGCCCTGACATTTGAT...CATGTTCATACCTTGTTCTCTGAAATTCAGCCGGGAATGACTTTGAACCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATCAAAAAGAGTTCTATTaGTCCCCACCACTCCATCAG +
Preference number: 5 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDQKEFY*SPPLHQ
Trigger: CTGATGGAGTGGTGGGGACAAATAGAACTCTTTTTG...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp AATGGATTAGACACAACAAGCAAAAGAAGGTATCTCGAATCATTGAAGGCAAGTTCAGTAATGTTGACATaGTTGGTCTCAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: NGLDTTSKRRYLESLKASSVMLT*LVSGTT
Trigger: TGTGGTCCCTGAGACCAACAATGTCAACATTACTGA...ACTTGCCTTCAATGATTCGAGATACCTTCTTTTGCTTGTTGTGTCTAATCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCAAGTTCTCAGTAATGTaGACATTGTTGGTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RGSIIYALKTISPFIIFGKFSVM*TLLVSG
Trigger: CCCTGAGACCAACAATGTCAACATTACTGAGAACTT...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTGGTAACCACCTTTCTTaGATTCCTGATGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFGNHLS*IPDEIL
Trigger: CAGAATTTCATCAGGAATCAAAGAAAGGTGGTTACC...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CTCCCTAGATTCTTGGTTTACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAGAAAGTTCGAGACGTaGTTACAATTTCAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: LPRFLVYQLIKSTPKRQYRKFET*LQFQRG
Trigger: ACCTCTTTGAAATTGTAACAACGTCTCGAACTTTCT...ATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GTGGGTTCTTTATCTGAACCACAGAACACAGGCAGTGATTTAGGTAACTGTTTTAGAAAGTTCGAGACGTaGTTACAATTTCAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: VGSLSEPQNTGSDLGNCFRKFET*LQFQRG
Trigger: ACCTCTTTGAAATTGTAACAACGTCTCGAACTTTCT...AAAACAGTTACCTAAATCACTGCCTGTGTTCTGTGGTTCAGATAAAGAACCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCCACAACCCTTACTGTaGGTCTATCCATATCCTCTA +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNPQPLL*VYPYPL
Trigger: TAGAGGATATGGATAGACCAACAGTAAGGGTTGTGG...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATTTCTACAGTAATGCCTaGTCCTCACTGGAGAAGTAT +
Preference number: 5 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDFYSNA*SSLEKY
Trigger: ATACTTCTCCAGTGAGGACAAGGCATTACTGTAGAA...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGGAGAAAGTGGCATTTaGGTGAGAATTGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNGESGI*VRIEGV
Trigger: CACACCTTCAATTCTCACCAAAATGCCACTTTCTCC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS CCA 90 bp AGATTTCACATTCAGATTCCAGATCTTCTGAATCACTTTTTGACTTaGAGCCACCAATGTCCATATTTTTCACTCCAAGCCATTCTTTGT +
Preference number: 5 (lower is better)
Translates to: RFHIQIPDLLNHFLT*SHQCPYFSLQAILC
Trigger: ACAAAGAATGGCTTGGAGTGAAAAATATGGACATTGGTGGCTCCAAGTCAAAAAGTGATTCAGAAGATCTGGAATCTGAATGTGAAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACGATAACCGCACTATCTaGAGGTGGTTTAGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNDNRTI*RWFRSK
Trigger: TTTACTCCTAAACCACCTCAAGATAGTGCGGTTATC...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp AGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCAGAAAGTTCGAGACGTaGTTACAATTTCAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: RGSIIYALKTISPFIIFGRKFET*LQFQRG
Trigger: ACCTCTTTGAAATTGTAACAACGTCTCGAACTTTCT...GCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp GTACACCTAAGAGGCAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATGAGTTTAGGTATCTaGGTCTGGCAATATTTCATG +
Preference number: 5 (lower is better)
Translates to: VHLRGSIIYALKTISPFIMSLGI*VWQYFM
Trigger: CATGAAATATTGCCAGACCAAGATACCTAAACTCAT...GATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATAGGTATCTCGAATCATaGAAGGCAAGTTGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDRYLES*KASCFK
Trigger: CTTAAAGCAACTTGCCTTCAATGATTCGAGATACCT...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACTTCACTTCCTTTCACTaGCCATATCTGATTCATCGG +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNFTSFH*PYLIHR
Trigger: CCGATGAATCAGATATGGCAAGTGAAAGGAAGTGAA...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACAAGGCATTTCTGAGCTaGAACATTACACTACAGGAG +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNKAFLS*NITLQE
Trigger: CTCCTGTAGTGTAATGTTCAAGCTCAGAAATGCCTT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS TCA 90 bp GGAACAGTTCCTCATTATTCCTTGACTTTCATAATCTTCACTCTATaGAGATTGCAAGGTAGTTATTTTGTAGAATGTCCCTCATTTGGG +
Preference number: 5 (lower is better)
Translates to: GTVPHYSLTFIIFTL*RLQGSYFVECPSFG
Trigger: CCCAAATGAGGGACATTCTACAAAATAACTACCTTGCAATCTTCATAGAGTGAAGATTATGAAAGTCAAGGAATAATGAGGAACTGTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS-3UTR CAA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTATGAGTTTAGGTATCTaGGTCTGGCAATATTTCATG +
Preference number: 5 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFMSLGI*VWQYFM
Trigger: CATGAAATATTGCCAGACCAAGATACCTAAACTCAT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000433307.2
CDS-3UTR CAA 90 bp CCTGACAATCACCAGAACATTTTCCTATGCTATCGAACAAGGATAGTTCTATTTATAGCACCGAATACTTaGAAGACTCCCACATTTTTA +
Preference number: 5 (lower is better)
Translates to: PDNHQNIFLCYRTRIVLFIAPNT*KTPTFL
Trigger: TAAAAATGTGGGAGTCTTCAAAGTATTCGGTGCTAT...AAATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp ATGTCAGGGCTTGAAATCTTTCAGGGAAGTTGTAATTTGATACGTACCTATGATAATAAGTTCTGTATATaGTGCTCAGCTCCATGCAAA +
Preference number: 5 (lower is better)
Translates to: MSGLEIFQGSCNLIRTYDNKFCI*CSAPCK
Trigger: TTTGCATGGAGCTGAGCACAATATACAGAACTTATT...ATCATAGGTACGTATCAAATTACAACTTCCCTGAAAGATTTCAAGCCCTGACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAAAGAAAGTTCGAGACGTaGTTACAATTTCAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLERKFET*LQFQRG
Trigger: ACCTCTTTGAAATTGTAACAACGTCTCGAACTTTCT...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS-3UTR CAA 90 bp TACCAGCTTATAAAGAGTACACCTAAGAGGCAGTATAATATACGCACTAAAAACATGAAGATGTCTACTTaGATACCTACTCTGCACAAT +
Preference number: 5 (lower is better)
Translates to: YQLIKSTPKRQYNIRTKNMKMST*IPTLHN
Trigger: ATTGTGCAGAGTAGGTATCAAAGTAGACATCTTCAT...GTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp TATTCTGGTAACCTTATTTATCAAATGTCAGGGCTTGAAATCTTTCAGGGAAGTTTATTTATGTCCCCTTaGGGCCAATCTAATCAACAA +
Preference number: 5 (lower is better)
Translates to: YSGNLIYQMSGLEIFQGSLFMSP*GQSNQQ
Trigger: TTGTTGATTAGATTGGCCCAAAGGGGACATAAATAA...ACTTCCCTGAAAGATTTCAAGCCCTGACATTTGATAAATAAGGTTACCAGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS-3UTR CAA 90 bp CAGTATAATATACGCACTAAAAACCATTTCCCCCTTTATCATCTTTGGCTAGAATCGTTTGCATTTTGCTaGTCTTATTTATGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: QYNIRTKNHFPLYHLWLESFAFC*SYLCPL
Trigger: AAGGGGACATAAATAAGACAAGCAAAATGCAAACGA...TTCTAGCCAAAGATGATAAAGGGGGAAATGGTTTTTAGTGCGTATATTATACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368990.7
CDS TCA 72 bp CAGACTGCCCCGTTGTGTGAAAGCCAACTAGTCCCATaGAGAAGCTGTGCGGAGAGAGGTGACCAGCCCACA +
Preference number: 6 (lower is better)
Translates to: QTAPLCESQLVP*RSCAERGDQPT
Trigger: TGTGGGCTGGTCACCTCTCTCCGCACAGCTTCTTCATGGGACTAGTTGGCTTTCACACAACGGGGCAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392799.7
CDS GCA 72 bp GCCGGGACCCCGCTGTGCTACAATGGCGCCAGAGACTaGTTTAATCCAACTGTGCATCTCTTCAGGGCTATC +
Preference number: 6 (lower is better)
Translates to: AGTPLCYNGARD*FNPTVHLFRAI
Trigger: GATAGCCCTGAAGAGATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS GCA 72 bp CCGCATAGAAGACGCAGATCTGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGACTGCTTTAATCCAACT +
Preference number: 6 (lower is better)
Translates to: PHRRRRSAGTPL*YNGARDCFNPT
Trigger: AGTTGGATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368988.5
ENST00000368989.6
CDS GCA 72 bp ATGCTCAGAAGACGCAGATCTGCCGGGACCCCGCTGTaGTACAATGGCGCCAGAGACTGCTTTAATCCAACT +
Preference number: 6 (lower is better)
Translates to: MLRRRRSAGTPL*YNGARDCFNPT
Trigger: AGTTGGATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
CDS CAA 72 bp AGTAGTAAGTCTGGGCCCTCCACTAAGAAGGCACGTTaGCGTGAGAGCCCACATACGTGCTGCATTCACCAG +
Preference number: 6 (lower is better)
Translates to: SSKSGPSTKKAR*RESPHTCCIHQ
Trigger: CTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTGCCTTCTTAGTGGAGGGCCCAGACTTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS TCA 72 bp TCCTCCCAAGCTGCCAGCACCCTTTTCTGCACATGCTaGTGCCGGTGTCTTCTGGATTTTACCCAAAGGTAC +
Preference number: 6 (lower is better)
Translates to: SSQAASTLFCTC*CRCLLDFTQRY
Trigger: GTACCTTTGGGTAAAATCCAGAAGACACCGGCATCAGCATGTGCAGAAAAGGGTGCTGGCAGCTTGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 90 bp GCACGTTTGCGTGAGAGCCCACATACGTGCTGCATTCACCAGCTCTaGATGTATACCTCTGTATACAAGGGTTCGACAGCCTTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: ARLRESPHTCCIHQL*MYTSVYKGSTAFWP
Trigger: AGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS CAA 90 bp TCAGTTGTAAGTAGTAAGTCTGGGCCCTCCACTAAGAAGGCACGTTaGCGTGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTGATG +
Preference number: 6 (lower is better)
Translates to: SVVSSKSGPSTKKAR*RESPHTCCIHQLLM
Trigger: CATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTGCCTTCTTAGTGGAGGGCCCAGACTTACTACTTACAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS CCA 72 bp AGGAGGTACACACCCGATGGTGGCTTGTCCTGTCACTaGTGTGTTAACCCTGATCTGTTGCTTAAGGTCATG +
Preference number: 6 (lower is better)
Translates to: RRYTPDGGLSCH*CVNPDLLLKVM
Trigger: CATGACCTTAAGCAACAGATCAGGGTTAACACACCAGTGACAGGACAAGCCACCATCGGGTGTGTACCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp CGTGAGAGCCCACATACGTGCTGCATTCACCAGCTCTaGATGTATACCTCTGTATACAAGGGTTCGACAGCC +
Preference number: 6 (lower is better)
Translates to: RESPHTCCIHQL*MYTSVYKGSTA
Trigger: GGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS CAA 72 bp TGGACCACTATTAGGAGGTACACACCCGATGGTGGCTaGTCCTGTCACTGGTGTGTTAACCCTGATCTGTTG +
Preference number: 6 (lower is better)
Translates to: WTTIRRYTPDGG*SCHWCVNPDLL
Trigger: CAACAGATCAGGGTTAACACACCAGTGACAGGACAAGCCACCATCGGGTGTGTACCTCCTAATAGTGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp GTGAGAGCCCACATACGTGCTGCATTCACCAGCTCTTaGTGTATACCTCTGTATACAAGGGTTCGACAGCCT +
Preference number: 6 (lower is better)
Translates to: VRAHIRAAFTSS*CIPLYTRVRQP
Trigger: AGGCTGTCGAACCCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS GCA 72 bp CAGTGCACCAGGTTCATGGAGAGCTCAATGAATGTCTaGTGCATGAATGACTCTTCCCGGGAGTATTGGCTT +
Preference number: 6 (lower is better)
Translates to: QCTRFMESSMNV*CMNDSSREYWL
Trigger: AAGCCAATACTCCCGGGAAGAGTCATTCATGCAGCAGACATTCATTGAGCTCTCCATGAACCTGGTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CCA 72 bp GTGTCTTCTGGATTTTACCCAAAGGTACTGTGCATATaGCAAGCAGTCAACTACAGCACAGCTGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: VSSGFYPKVLCI*QAVNYSTAAAW
Trigger: CCAGGCTGCAGCTGTGCTGTAGTTGACTGCTTGCCATATGCACAGTACCTTTGGGTAAAATCCAGAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS GCA 72 bp AAGAAGGCACGTTTGCGTGAGAGCCCACATACGTGCTaGATTCACCAGCTCTTGATGTATACCTCTGTATAC +
Preference number: 6 (lower is better)
Translates to: KKARLRESPHTC*IHQLLMYTSVY
Trigger: GTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTGCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS GCA 72 bp ACTAAGAAGGCACGTTTGCGTGAGAGCCCACATACGTaGTGCATTCACCAGCTCTTGATGTATACCTCTGTA +
Preference number: 6 (lower is better)
Translates to: TKKARLRESPHT*CIHQLLMYTSV
Trigger: TACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGTATGTGGGCTCTCACGCAAACGTGCCTTCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368988.5
CDS GCA 72 bp ATGCCGGTGTCTTCTGGATTTTACCCAAAGGTACTGTaGATATGGCAAGCAGTCAACTACAGCACAGCTGCA +
Preference number: 6 (lower is better)
Translates to: MPVSSGFYPKVL*IWQAVNYSTAA
Trigger: TGCAGCTGTGCTGTAGTTGACTGCTTGCCATATGCACAGTACCTTTGGGTAAAATCCAGAAGACACCGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CCA 72 bp AGAATGGCATTTACAGTTGCTTTTGGGCAGGGTGGGTaGGGATTTGCCAATCTCTTAACTCAGCCACAACCT +
Preference number: 6 (lower is better)
Translates to: RMAFTVAFGQGG*GFANLLTQPQP
Trigger: AGGTTGTGGCTGAGTTAAGAGATTGGCAAATCCCCACCCACCCTGCCCAAAAGCAACTGTAAATGCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 90 bp GCCACTTCCTTATCCTCTGGCACAACTTCACTTTCTGAGCTCAGCTaGTACTTTATCTGCCCCAGCTCTGAAATCAGTCACATCACCAAG +
Preference number: 6 (lower is better)
Translates to: ATSLSSGTTSLSELS*YFICPSSEISHITK
Trigger: CTTGGTGATGTGACTGATTTCAGAGCTGGGGCAGATAAAGTACAAGCTGAGCTCAGAAAGTGAAGTTGTGCCAGAGGATAAGGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp GGTGATGCAGTATTTAAGAATGTTTCATGGTGTCCCTaGGATTTCCTCCCAAGCTGCCAGCACCCTTTTCTG +
Preference number: 6 (lower is better)
Translates to: GDAVFKNVSWCP*DFLPSCQHPFL
Trigger: CAGAAAAGGGTGCTGGCAGCTTGGGAGGAAATCTCAGGGACACCATGAAACATTCTTAAATACTGCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp ATGTCCCTCATTTGGGTGTGCCTCATGATGGGATTCTaGTTACATACCTTGGGCAGGGATTTCACAGAAGTG +
Preference number: 6 (lower is better)
Translates to: MSLIWVCLMMGF*LHTLGRDFTEV
Trigger: CACTTCTGTGAAATCCCTGCCCAAGGTATGTAATCAGAATCCCATCATGAGGCACACCCAAATGAGGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp TTCCAAGCCCAACTGCTGTGCTCTAGACCCTGTTTATaGGCACACTTACTATTGGCTTACAGCTCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: FQAQLLCSRPCL*AHLLLAYSSLL
Trigger: CAGCAAAGAGCTGTAAGCCAATAGTAAGTGTGCCAATAAACAGGGTCTAGAGCACAGCAGTTGGGCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp GGCTCTGACACCCACACAAAGCTACACTGGTTCCTCTaGGATGCCTATGTTGCTTTGCCTCACCTAATAAAT +
Preference number: 6 (lower is better)
Translates to: GSDTHTKLHWFL*DAYVALPHLIN
Trigger: ATTTATTAGGTGAGGCAAAGCAACATAGGCATCCAAGAGGAACCAGTGTAGCTTTGTGTGGGTGTCAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 90 bp GCCCAACTGCTGTGCTCTAGACCCTGTTTATTGGCACACTTACTATaGGCTTACAGCTCTTTGCTGTTTTCTTCCCTTTCTCCATTCCTA +
Preference number: 6 (lower is better)
Translates to: AQLLCSRPCLLAHLL*AYSSLLFSSLSPFL
Trigger: TAGGAATGGAGAAAGGGAAGAAAACAGCAAAGAGCTGTAAGCCAATAGTAAGTGTGCCAATAAACAGGGTCTAGAGCACAGCAGTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp AACACCTCCCAGTCTGGGTTTGCCTGTTATTCGTGCTaGGATTCAGTTTATACACTTTTGACAGGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: NTSQSGFACYSC*DSVYTLLTGSH
Trigger: GTGGCTTCCTGTCAAAAGTGTATAAACTGAATCTCAGCACGAATAACAGGCAAACCCAGACTGGGAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS GCA 72 bp ACAACTTCACTTTCTGAGCTCAGCTTGTACTTTATCTaGCCCAGCTCTGAAATCAGTCACATCACCAAGGGT +
Preference number: 6 (lower is better)
Translates to: TTSLSELSLYFI*PSSEISHITKG
Trigger: ACCCTTGGTGATGTGACTGATTTCAGAGCTGGGGCAGATAAAGTACAAGCTGAGCTCAGAAAGTGAAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp TTATCCTCTGGCACAACTTCACTTTCTGAGCTCAGCTaGTACTTTATCTGCCCCAGCTCTGAAATCAGTCAC +
Preference number: 6 (lower is better)
Translates to: LSSGTTSLSELS*YFICPSSEISH
Trigger: GTGACTGATTTCAGAGCTGGGGCAGATAAAGTACAAGCTGAGCTCAGAAAGTGAAGTTGTGCCAGAGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp GGCTTGTCCTGTCACTGGTGTGTTAACCCTGATCTGTaGCTTAAGGTCATGTTTGCCAGTAGCTGTAAAATT +
Preference number: 6 (lower is better)
Translates to: GLSCHWCVNPDL*LKVMFASSCKI
Trigger: AATTTTACAGCTACTGGCAAACATGACCTTAAGCAACAGATCAGGGTTAACACACCAGTGACAGGACAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 90 bp TGTCTGCATTTTGGTCAGCTCCTTCAAGGTAATTTCTGTGTCCTTTaGACATGTTCCATTCATTCTCTGAGCCACTTCCTTATCCTCTGG +
Preference number: 6 (lower is better)
Translates to: CLHFGQLLQGNFCVL*TCSIHSLSHFLILW
Trigger: CCAGAGGATAAGGAAGTGGCTCAGAGAATGAATGGAACATGTCAAAAGGACACAGAAATTACCTTGAAGGAGCTGACCAAAATGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp TATTTTGTAGAATGTCCCTCATTTGGGTGTGCCTCATaGTGGGATTCTGATTACATACCTTGGGCAGGGATT +
Preference number: 6 (lower is better)
Translates to: YFVECPSFGCAS*WDSDYIPWAGI
Trigger: AATCCCTGCCCAAGGTATGTAATCAGAATCCCATCATGAGGCACACCCAAATGAGGGACATTCTACAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp CCCAGCTCTGAAATCAGTCACATCACCAAGGGTTCCTaGTTCCTTTTGTTTACAGAATGGCATTTACAGTTG +
Preference number: 6 (lower is better)
Translates to: PSSEISHITKGS*FLLFTEWHLQL
Trigger: CAACTGTAAATGCCATTCTGTAAACAAAAGGAATCAGGAACCCTTGGTGATGTGACTGATTTCAGAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp TTCAGTTTATACACTTTTGACAGGAAGCCACAGACATaGCACTGTTCTTCTCAGTGGACCACTATTAGGAGG +
Preference number: 6 (lower is better)
Translates to: FSLYTFDRKPQT*HCSSQWTTIRR
Trigger: CCTCCTAATAGTGGTCCACTGAGAAGAACAGTGTCATGTCTGTGGCTTCCTGTCAAAAGTGTATAAACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS GCA 72 bp GCTTGTCCTGTCACTGGTGTGTTAACCCTGATCTGTTaGTTAAGGTCATGTTTGCCAGTAGCTGTAAAATTA +
Preference number: 6 (lower is better)
Translates to: ACPVTGVLTLIC*LRSCLPVAVKL
Trigger: TAATTTTACAGCTACTGGCAAACATGACCTTAAGCAACAGATCAGGGTTAACACACCAGTGACAGGACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp GCCAGTTATTTTTGTAGAACACCTCCCAGTCTGGGTTaGCCTGTTATTCGTGCTGAGATTCAGTTTATACAC +
Preference number: 6 (lower is better)
Translates to: ASYFCRTPPSLG*PVIRAEIQFIH
Trigger: GTGTATAAACTGAATCTCAGCACGAATAACAGGCAAACCCAGACTGGGAGGTGTTCTACAAAAATAACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp GTTCATGGAGAGCTCAATGAATGTCTGCTGCATGAATaGCTCTTCCCGGGAGTATTGGCTTTAAATAAAATC +
Preference number: 6 (lower is better)
Translates to: VHGELNECLLHE*LFPGVLALNKI
Trigger: GATTTTATTTAAAGCCAATACTCCCGGGAAGAGTCATTCATGCAGCAGACATTCATTGAGCTCTCCATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp CCCAACCCTACAACACATGTACTACTATTCATGTGCTaGAACTGCAGATTAGACATGTTAAGTATCTCACCC +
Preference number: 6 (lower is better)
Translates to: PNPTTHVLLFMC*NCRLDMLSISP
Trigger: GGGTGAGATACTTAACATGTCTAATCTGCAGTTTCAGCACATGAATAGTAGTACATGTGTTGTAGGGTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS GCA 72 bp AATCTTAAAATATCCCCTTCCTATACACTAGTGCTCTaGTGGCCAATACAGTGGCCATTGTGTGTAATGATG +
Preference number: 6 (lower is better)
Translates to: NLKISPSYTLVL*WPIQWPLCVMM
Trigger: CATCATTACACACAATGGCCACTGTATTGGCCAGCAGAGCACTAGTGTATAGGAAGGGGATATTTTAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS GCA 72 bp CCAGTTATTTTTGTAGAACACCTCCCAGTCTGGGTTTaGCTGTTATTCGTGCTGAGATTCAGTTTATACACT +
Preference number: 6 (lower is better)
Translates to: PVIFVEHLPVWV*LLFVLRFSLYT
Trigger: AGTGTATAAACTGAATCTCAGCACGAATAACAGGCAAACCCAGACTGGGAGGTGTTCTACAAAAATAACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp TTTGGTCAGCTCCTTCAAGGTAATTTCTGTGTCCTTTaGACATGTTCCATTCATTCTCTGAGCCACTTCCTT +
Preference number: 6 (lower is better)
Translates to: FGQLLQGNFCVL*TCSIHSLSHFL
Trigger: AAGGAAGTGGCTCAGAGAATGAATGGAACATGTCAAAAGGACACAGAAATTACCTTGAAGGAGCTGACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 90 bp CCTGTCACTGGTGTGTTAACCCTGATCTGTTGCTTAAGGTCATGTTaGCCAGTAGCTGTAAAATTACTTTTTCCCTTTGTCACTGTTAAG +
Preference number: 6 (lower is better)
Translates to: PVTGVLTLICCLRSC*PVAVKLLFPFVTVK
Trigger: CTTAACAGTGACAAAGGGAAAAAGTAATTTTACAGCTACTGGCAAACATGACCTTAAGCAACAGATCAGGGTTAACACACCAGTGACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp ATTACCAATGACATTCACTTTAATCATCTGACCACCTaGGTAAAGTGGTATCTGCCAGGTTTCCTCACTGTA +
Preference number: 6 (lower is better)
Translates to: ITNDIHFNHLTT*VKWYLPGFLTV
Trigger: TACAGTGAGGAAACCTGGCAGATACCACTTTACTCAGGTGGTCAGATGATTAAAGTGAATGTCATTGGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp AGTGATGCTGTCTTCGTCTTCCACTATCCTGTCAGGTaGTTTCAATTTACCTCATTACCAATGACATTCACT +
Preference number: 6 (lower is better)
Translates to: SDAVFVFHYPVR*FQFTSLPMTFT
Trigger: AGTGAATGTCATTGGTAATGAGGTAAATTGAAATCACCTGACAGGATAGTGGAAGACGAAGACAGCATCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS GCA 72 bp TTGCAAAACTCTGGGAAGAGCATTATGATACAAGTATaGATAGGGTACCACAGGGCATATAAAGAGAAGACA +
Preference number: 6 (lower is better)
Translates to: LQNSGKSIMIQV*IGYHRAYKEKT
Trigger: TGTCTTCTCTTTATATGCCCTGTGGTACCCTATGCATACTTGTATCATAATGCTCTTCCCAGAGTTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CCA 72 bp GTTGCAAAGACAAGAATGCACGTGATTGCAAAACTCTaGGAAGAGCATTATGATACAAGTATGCATAGGGTA +
Preference number: 6 (lower is better)
Translates to: VAKTRMHVIAKL*EEHYDTSMHRV
Trigger: TACCCTATGCATACTTGTATCATAATGCTCTTCCCAGAGTTTTGCAATCACGTGCATTCTTGTCTTTGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CCA 72 bp ATTCAGATTCCAGATCTTCTGAATCACTTTTTGACTTaGAGCCACCAATGTCCATATTTTTCACTCCAAGCC +
Preference number: 6 (lower is better)
Translates to: IQIPDLLNHFLT*SHQCPYFSLQA
Trigger: GGCTTGGAGTGAAAAATATGGACATTGGTGGCTCCAAGTCAAAAAGTGATTCAGAAGATCTGGAATCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp CATTCAGATTCCAGATCTTCTGAATCACTTTTTGACTaGGAGCCACCAATGTCCATATTTTTCACTCCAAGC +
Preference number: 6 (lower is better)
Translates to: HSDSRSSESLFD*EPPMSIFFTPS
Trigger: GCTTGGAGTGAAAAATATGGACATTGGTGGCTCCAAGTCAAAAAGTGATTCAGAAGATCTGGAATCTGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp GGTGTGTTAACCCTGATCTGTTGCTTAAGGTCATGTTaGCCAGTAGCTGTAAAATTACTTTTTCCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: GVLTLICCLRSC*PVAVKLLFPFV
Trigger: GACAAAGGGAAAAAGTAATTTTACAGCTACTGGCAAACATGACCTTAAGCAACAGATCAGGGTTAACACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 90 bp GTCCATATTTTTCACTCCAAGCCATTCTTTGTGCCAAAAAGAGTGTaGGTGATGCAGTATTTAAGAATGTTTCATGGTGTCCCTGAGATT +
Preference number: 6 (lower is better)
Translates to: VHIFHSKPFFVPKRV*VMQYLRMFHGVPEI
Trigger: AATCTCAGGGACACCATGAAACATTCTTAAATACTGCATCACCAACACTCTTTTTGGCACAAAGAATGGCTTGGAGTGAAAAATATGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp TGTACCACACGAAACTATCTTCTCTGGTATCCAGTATaGAGTACCTTCGAAGAAATTTCCCACTGTTTTCAT +
Preference number: 6 (lower is better)
Translates to: CTTRNYLLWYPV*STFEEISHCFH
Trigger: ATGAAAACAGTGGGAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368988.5
ENST00000368989.6
ENST00000368990.7
ENST00000392799.7
ENST00000433307.2
ENST00000463663.6
ENST00000494222.5
CDS CCA 72 bp CATGATTTAGTCTTCTCCAATGATTTAAAGGGCACGTaGAACCTTGCAGTCTTTCAGAAACACTATGACAAA +
Preference number: 6 (lower is better)
Translates to: HDLVFSNDLKGT*NLAVFQKHYDK
Trigger: TTTGTCATAGTGTTTCTGAAAGACTGCAAGGTTCCACGTGCCCTTTAAATCATTGGAGAAGACTAAATCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp TTTCACTCCAAGCCATTCTTTGTGCCAAAAAGAGTGTaGGTGATGCAGTATTTAAGAATGTTTCATGGTGTC +
Preference number: 6 (lower is better)
Translates to: FHSKPFFVPKRV*VMQYLRMFHGV
Trigger: GACACCATGAAACATTCTTAAATACTGCATCACCAACACTCTTTTTGGCACAAAGAATGGCTTGGAGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp TTTCACATTCAGATTCCAGATCTTCTGAATCACTTTTaGACTTGGAGCCACCAATGTCCATATTTTTCACTC +
Preference number: 6 (lower is better)
Translates to: FHIQIPDLLNHF*TWSHQCPYFSL
Trigger: GAGTGAAAAATATGGACATTGGTGGCTCCAAGTCAAAAAGTGATTCAGAAGATCTGGAATCTGAATGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 72 bp GGAACCTATAGTAATACCAGGTTTCCCATCATAATTTaGCAACTAGTTTTATCAAACCCTGAAAACTCCTGC +
Preference number: 6 (lower is better)
Translates to: GTYSNTRFPIII*QLVLSNPENSC
Trigger: GCAGGAGTTTTCAGGGTTTGATAAAACTAGTTGCAAAATTATGATGGGAAACCTGGTATTACTATAGGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS CAA 90 bp TCCCATACAAAAAGAAGACGTAGGATAGACATTTATACTACAGAATaGCATTCAATGTCTCCAATAAGCTATTTCAGGACTCAGATCACC +
Preference number: 6 (lower is better)
Translates to: SHTKRRRRIDIYTTE*HSMSPISYFRTQIT
Trigger: GGTGATCTGAGTCCTGAAATAGCTTATTGGAGACATTGAATGCAATTCTGTAGTATAAATGTCTATCCTACGTCTTCTTTTTGTATGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481451.1
CDS TCA 72 bp AAGCTGAGCCATGTGTTAACAATTATGACATCTAGGTaGTGGGTATATGCAGGTTCCATGTATTATTTCTAT +
Preference number: 6 (lower is better)
Translates to: KLSHVLTIMTSR*WVYAGSMYYFY
Trigger: ATAGAAATAATACATGGAACCTGCATATACCCATCACCTAGATGTCATAATTGTTAACACATGGCTCAGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481451.1