RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000180287

Ensembl transcript IDs: ENST00000314833.10, ENST00000366545.5, ENST00000427495.5, ENST00000442594.6, ENST00000459864.1, ENST00000467561.5, ENST00000474177.1, ENST00000536534.7

Found 643 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTaGTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTG +
Preference number: 1 (lower is better)
Translates to: CPRDCQSKPALPIYT*CLSTIQKEDCSRPL
Trigger: CAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR TCA 90 bp CAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTCCTaGCACTCTAGGCTGTCAACTTCTATGCCCAAATGGGAAGGGAAT +
Preference number: 1 (lower is better)
Translates to: QLLTLSLEPQTTRPS*HSRLSTSMPKWEGN
Trigger: ATTCCCTTCCCATTTGGGCATAGAAGTTGACAGCCTAGAGTGTCAGGACGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 90 bp AGCTGTGGCCAGTGTAGAGAGCTCACATGGCAGAAAACATGGTTTTaGTCCTGCAGGAGCTGTGGAGGTAGGGTCTCTCCAAGACACCAG +
Preference number: 1 (lower is better)
Translates to: SCGQCRELTWQKTWF*SCRSCGGRVSPRHQ
Trigger: CTGGTGTCTTGGAGAGACCCTACCTCCACAGCTCCTGCAGGAGCAAAACCATGTTTTCTGCCATGTGAGCTCTCTACACTGGCCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 90 bp CGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTaGCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACT +
Preference number: 1 (lower is better)
Translates to: RVLSSVPGIASPNRH*RYTRAVCPRSRRRT
Trigger: AGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR GCA 90 bp CTCAGACCACTCGGCCGTCCTGACACTCTAGGCTGTCAACTTCTATaGCCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAG +
Preference number: 1 (lower is better)
Translates to: LRPLGRPDTLGCQLL*PNGKGIYTLGELVE
Trigger: CTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGCATAGAAGTTGACAGCCTAGAGTGTCAGGACGGCCGAGTGGTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp CTTCTCGTAGCACATACAGCAGATAGTGACAGTGAAGGGGCCCCATaGCACCAAGCCTATGAGTGTCCCATGGCTGTGGATGAATACTTC +
Preference number: 1 (lower is better)
Translates to: LLVAHTADSDSEGAP*HQAYECPMAVDEYF
Trigger: GAAGTATTCATCCACAGCCATGGGACACTCATAGGCTTGGTGTCATGGGGCCCCTTCACTGTCACTATCTGCTGTATGTGCTACGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 90 bp ACAGTAGCACAGAGAGGGCCCGAATGGTGCCCAGAGTTACACAGGTaGAAAGTGTATCCGCAGACCTTTTGTTTCTTTGTCTGCTTTGAC +
Preference number: 1 (lower is better)
Translates to: TVAQRGPEWCPELHR*KVYPQTFCFFVCFD
Trigger: GTCAAAGCAGACAAAGAAACAAAAGGTCTGCGGATACACTTTGCACCTGTGTAACTCTGGGCACCATTCGGGCCCTCTCTGTGCTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 90 bp CATTCAGACATGAGACAAACAGTAGCACAGAGAGGGCCCGAATGGTaGCCAGAGTTACACAGGTGCAAAGTGTATCCGCAGACCTTTTGT +
Preference number: 1 (lower is better)
Translates to: HSDMRQTVAQRGPEW*PELHRCKVYPQTFC
Trigger: ACAAAAGGTCTGCGGATACACTTTGCACCTGTGTAACTCTGGGCACCATTCGGGCCCTCTCTGTGCTACTGTTTGTCTCATGTCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp AACCATTCAGACATGAGACAAACAGTAGCACAGAGAGGGCCCGAATaGTGCCCAGAGTTACACAGGTGCAAAGTGTATCCGCAGACCTTT +
Preference number: 1 (lower is better)
Translates to: NHSDMRQTVAQRGPE*CPELHRCKVYPQTF
Trigger: AAAGGTCTGCGGATACACTTTGCACCTGTGTAACTCTGGGCACCATTCGGGCCCTCTCTGTGCTACTGTTTGTCTCATGTCTGAATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp GCCCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATaGCTGTTAAAGTATGCTCTACAGCTCAATATGGGTTTGCTGAGC +
Preference number: 1 (lower is better)
Translates to: AQMGREFTRWVSWLR*LLKYALQLNMGLLS
Trigger: GCTCAGCAAACCCATATTGAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp GTTATTCATGCCAAAGCAGCCCAACGCAATGTTCTATTGAAATGTTaGCAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTT +
Preference number: 1 (lower is better)
Translates to: VIHAKAAQRNVLLKC*QSRSPPGFLWGCAL
Trigger: AAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAACATTTCAATAGAACATTGCGTTGGGCTGCTTTGGCATGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp TTTACTTTCTGGTGTTCAAACTCCCTAAAAGAGGGCCGTGATTGGTaGGGCCAGGTACCATCAAACAAGAATACCACTGCTAGGTACACT +
Preference number: 1 (lower is better)
Translates to: FTFWCSNSLKEGRDW*GQVPSNKNTTARYT
Trigger: AGTGTACCTAGCAGTGGTATTCTTGTTTGATGGTACCTGGCCCCACCAATCACGGCCCTCTTTTAGGGAGTTTGAACACCAGAAAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp TCATTTACTTTCTGGTGTTCAAACTCCCTAAAAGAGGGCCGTGATTaGTGGGGCCAGGTACCATCAAACAAGAATACCACTGCTAGGTAC +
Preference number: 1 (lower is better)
Translates to: SFTFWCSNSLKEGRD*WGQVPSNKNTTARY
Trigger: GTACCTAGCAGTGGTATTCTTGTTTGATGGTACCTGGCCCCACCAATCACGGCCCTCTTTTAGGGAGTTTGAACACCAGAAAGTAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp GTGTTGATGTTATTCATGCCAAAGCAGCCCAACGCAATGTTCTATTaGAATGTTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCT +
Preference number: 1 (lower is better)
Translates to: VLMLFMPKQPNAMFY*NVDNPDLHQGFCGA
Trigger: AGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAACATTTCAATAGAACATTGCGTTGGGCTGCTTTGGCATGAATAACATCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 90 bp GGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGTATaGTCTACAGCTCAATATGGGTTTGCTGAGCAGACACTAGGTTCT +
Preference number: 1 (lower is better)
Translates to: GIYTLGELVEMAVKV*STAQYGFAEQTLGS
Trigger: AGAACCTAGTGTCTGCTCAGCAAACCCATATTGAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp CCAGGAATGTTAATGGGGAGTAGTCACCCTGCTCCTCATAATTTCTaGCATGGACATCCACCAGAGGGTGTCAAATTAACCTGTTTTTGT +
Preference number: 1 (lower is better)
Translates to: PGMLMGSSHPAPHNF*HGHPPEGVKLTCFC
Trigger: ACAAAAACAGGTTAATTTGACACCCTCTGGTGGATGTCCATGCCAGAAATTATGAGGAGCAGGGTGACTACTCCCCATTAACATTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp AAAAACAAACAGAATGAATCAGAGTCACTGAGTATAGCCACAGGCTaGTGGGAAATGAGCTTCTATCCATCCCAGGTTCATCGAGGCACT +
Preference number: 1 (lower is better)
Translates to: KNKQNESESLSIATG*WEMSFYPSQVHRGT
Trigger: AGTGCCTCGATGAACCTGGGATGGATAGAAGCTCATTTCCCACCAGCCTGTGGCTATACTCAGTGACTCTGATTCATTCTGTTTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp AACTTCTATGCCCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTaGTTGAGATGGCTGTTAAAGTATGCTCTACAGCTCAATATGGGT +
Preference number: 1 (lower is better)
Translates to: NFYAQMGREFTRWVS*LRWLLKYALQLNMG
Trigger: ACCCATATTGAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGCATAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp TATGGTCCTGAAGAACCAGCTCTAGCACGACGTCTAGTTTTGTGTTaGTGTTATTCATGCCAAAGCAGCCCAACGCAATGTTCTATTGAA +
Preference number: 1 (lower is better)
Translates to: YGPEEPALARRLVLC*CYSCQSSPTQCSIE
Trigger: TTCAATAGAACATTGCGTTGGGCTGCTTTGGCATGAATAACATCAACACAAAACTAGACGTCGTGCTAGAGCTGGTTCTTCAGGACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp TTAGAGAAAGAGATAGGTATAGTGTTTCAAAGATGCCTCCTTGTGTaGATATACAAAACAGTGGGCCCATTGGACCAGTCGCATCTACCT +
Preference number: 1 (lower is better)
Translates to: LEKEIGIVFQRCLLV*IYKTVGPLDQSHLP
Trigger: AGGTAGATGCGACTGGTCCAATGGGCCCACTGTTTTGTATATTCACACAAGGAGGCATCTTTGAAACACTATACCTATCTCTTTCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 90 bp TTACACAGGTGCAAAGTGTATCCGCAGACCTTTTGTTTCTTTGTCTaGTTTGACTTGTTAAAGACGCTGGTTTTCATTCTCTGTGCCACA +
Preference number: 1 (lower is better)
Translates to: LHRCKVYPQTFCFFV*FDLLKTLVFILCAT
Trigger: TGTGGCACAGAGAATGAAAACCAGCGTCTTTAACAAGTCAAAGCAGACAAAGAAACAAAAGGTCTGCGGATACACTTTGCACCTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 90 bp GTTTCTATCAGGTTCAGGTACCTAAAGCTTGTTGTTTACAAAGCATaGATGTCATCTCACTCTTCCACTTCCTCTCCAATGGTTGGACAA +
Preference number: 1 (lower is better)
Translates to: VSIRFRYLKLVVYKA*MSSHSSTSSPMVGQ
Trigger: TTGTCCAACCATTGGAGAGGAAGTGGAAGAGTGAGATGACATCCATGCTTTGTAAACAACAAGCTTTAGGTACCTGAACCTGATAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp TGTTCAGGAGTCAAGTATTTCTCCAGTAAGCTAAGAGCAGAATGGTaGATCAACAAGACCTCAAATTGTCTTGACTGCAGAAGTAACTGC +
Preference number: 1 (lower is better)
Translates to: CSGVKYFSSKLRAEW*INKTSNCLDCRSNC
Trigger: GCAGTTACTTCTGCAGTCAAGACAATTTGAGGTCTTGTTGATTCACCATTCTGCTCTTAGCTTACTGGAGAAATACTTGACTCCTGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp CCATCTGTCACCATGTACTTGTTGCGATTTAACCTAGGAAAGGTGTaGTTCTTTTGTTCTTTTGTAGCACAAGCATTCTCTCTTTCCAGA +
Preference number: 1 (lower is better)
Translates to: PSVTMYLLRFNLGKV*FFCSFVAQAFSLSR
Trigger: TCTGGAAAGAGAGAATGCTTGTGCTACAAAAGAACAAAAGAATCACACCTTTCCTAGGTTAAATCGCAACAAGTACATGGTGACAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR TCA 90 bp AAAGCACACCAGTTCATTGGGAACAAGTACAGAAAGATAAAAGAATaGAACATTTGTCCACAATATATGGGGCTGTTCGTAAGGACTGAG +
Preference number: 1 (lower is better)
Translates to: KAHQFIGNKYRKIKE*NICPQYMGLFVRTE
Trigger: CTCAGTCCTTACGAACAGCCCCATATATTGTGGACAAATGTTTCATTCTTTTATCTTTCTGTACTTGTTCCCAATGAACTGGTGTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp CTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATATGAATaGGAGATAGCTTTATCACTGGAGACAAATTGGCCTTTGTTTCTC +
Preference number: 1 (lower is better)
Translates to: LQDTRKTIDPPMKYE*EIALSLETNWPLFL
Trigger: GAGAAACAAAGGCCAATTTGTCTCCAGTGATAAAGCTATCTCTCATTCATATTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp GTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATATaGATGAGAGATAGCTTTATCACTGGAGACAAATTGGCCTTTGTT +
Preference number: 1 (lower is better)
Translates to: VSPRHQENYRSTYEI*MRDSFITGDKLAFV
Trigger: AACAAAGGCCAATTTGTCTCCAGTGATAAAGCTATCTCTCATTCATATTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 90 bp TTTCAAACTGCAGTTGGCTATTTCAGTGCAAATCGCTTTAAGAGATaGAATAAAGTTAAACGTAAGGGGATCAGTTTCCTTCCAGAAGCT +
Preference number: 1 (lower is better)
Translates to: FQTAVGYFSANRFKR*NKVKRKGISFLPEA
Trigger: AGCTTCTGGAAGGAAACTGATCCCCTTACGTTTAACTTTATTTCATCTCTTAAAGCGATTTGCACTGAAATAGCCAACTGCAGTTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR CCA 90 bp GCTGCTTTCTTTTTAAAATCATCACCAAAGCCACGTTTACTTTATTaGGATAACTGGCAGAGTTATAACTCCCAACTCAAATATGGATTG +
Preference number: 1 (lower is better)
Translates to: AAFFLKSSPKPRLLY*DNWQSYNSQLKYGL
Trigger: CAATCCATATTTGAGTTGGGAGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGATTTTAAAAAGAAAGCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 90 bp ACATTACCAAGAGAAGCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTaGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGC +
Preference number: 2 (lower is better)
Translates to: TLPREARGQAVRGSA*SHRVGNNIGTGHPG
Trigger: GCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGCTTCTCTTGGTAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR GCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 2 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314833.10
3UTR-3UTR TCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACCTATTCATGCTTAGCTaGCTGTGTAGGTCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNLFMLS*LCRSWR
Trigger: TCTCCAAGACCTACACAGTCAGCTAAGCATGAATAG...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACGACTTGATAGCTTGCTaGATATTAGCAGGTGGCTAC +
Preference number: 2 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNDLIAC*ILAGGY
Trigger: GTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTC...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTTGTTTTCCTTTGTaGATTCTGGGGGAGGACCTG +
Preference number: 2 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNICFPL*ILGEDL
Trigger: CAGGTCCTCCCCCAGAATCCACAAAGGAAAACAAAT...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTTGGCTGTAAGGTTTTaGCATACGGTGAATACCAGT +
Preference number: 2 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNLAVRF*HTVNTS
Trigger: ACTGGTATTCACCGTATGCCAAAACCTTACAGCCAA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314833.10
3UTR CAA 90 bp TATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGC +
Preference number: 2 (lower is better)
Translates to: YTFRGSFPPVSSVAV*LERGLSLNRLEQFG
Trigger: GCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR TCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGAAGCTTCCTAACAACTaGCCGGGTAGGTCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPKLPNN*PGRSAE
Trigger: TTCTGCTGACCTACCCGGTCAGTTGTTAGGAAGCTT...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACCGTCTAGTTTTGTGTTaGTGTTATTCATGCCAAAGC +
Preference number: 2 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNRLVLC*CYSCQS
Trigger: GCTTTGGCATGAATAACATCAACACAAAACTAGACG...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp TTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 2 (lower is better)
Translates to: LERGLSLNRLEQFGCLVGICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR CAA 90 bp CCGCCTGTGTCGTCTGTGGCAGTTTTGTTGGAGAGGGGTTTGAGTTaGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCTGTAAGGTT +
Preference number: 2 (lower is better)
Translates to: PPVSSVAVLLERGLS*NRLEQFGCLVGCKV
Trigger: AACCTTACAGCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGACTTCTACGCCAGAATaGCATTCTCTGTCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: GLRFESQSREQHWNWTSRTSTPE*HSLSEV
Trigger: TACCTCTGACAGAGAATGTCATTCTGGCGTAGAAGT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR GCA 90 bp ATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: MTPSSFICPRDCQSKPALSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR-3UTR GCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGGCAGACTTGATAGCTTaGTGGATATTAGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLADLIA*WILAGG
Trigger: GCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGC...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGGCTCCTCATAATTTCTaGCATGGACATCCACCAGAG +
Preference number: 2 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPAPHNF*HGHPPE
Trigger: CTCTGGTGGATGTCCATGCCAGAAATTATGAGGAGC...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGACTTCTACGCCAGAATaGCATTCTCTGTCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLTSTPE*HSLSEV
Trigger: TACCTCTGACAGAGAATGTCATTCTGGCGTAGAAGT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR TCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGACTTCTACGCCAGAATaGCATTCTCTGTCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPTSTPE*HSLSEV
Trigger: TACCTCTGACAGAGAATGTCATTCTGGCGTAGAAGT...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGAGCTCTAGAAACGTTTaGTGGCATACTCTTAACAGC +
Preference number: 2 (lower is better)
Translates to: GLRFESQSREQHWNWTSRSSRNV*WHTLNS
Trigger: GCTGTTAAGAGTATGCCAGCAAACGTTTCTAGAGCT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGTTCTATTGAAATGTTaGCAATCCAGATCTCCACCA +
Preference number: 2 (lower is better)
Translates to: GLRFESQSREQHWNWTSRVLLKC*QSRSPP
Trigger: TGGTGGAGATCTGGATTGTCAACATTTCAATAGAAC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp CAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGAATACCAGTCCCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 2 (lower is better)
Translates to: QFGCLVGCKVLAYGEYQSLPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...GGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR GCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 2 (lower is better)
Translates to: GLRFESQSREQHWNWTSRDVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR TCA 90 bp TTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCGGTTTTGGCATACGGTaGATACCAGTCCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LERGLSLNRLEQFGCLVGGFGIR*IPVPFK
Trigger: TTTGAAAGGGACTGGTATTCACCGTATGCCAAAACC...GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR GCA 90 bp TCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 2 (lower is better)
Translates to: SVSSSCYTFRGSFPPVSSLPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...AGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR GCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 2 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLDVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGCCACCAGGGTTTCTGTaGGGCTGTGCTCTTTTCATC +
Preference number: 2 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKPPGFL*GCALFI
Trigger: GATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGG...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp GCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: AVVEDDTEFFHLSQGLPVLLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...GACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR-3UTR TCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGGATAGACCCTGGATCTaGTCTTATCAAGAAATTCTT +
Preference number: 2 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPDRPWI*SYQEIL
Trigger: AAGAATTTCTTGATAAGATCAGATCCAGGGTCTATC...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp CGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTCATGTTTGATTTCAATATTTTaGGAAGTCAGCTGGAGCAAC +
Preference number: 2 (lower is better)
Translates to: RSRRRTAAGPCCKRSCSCLISIF*EVSWSN
Trigger: GTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAA...ACATGAACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR GCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAACCAGAGTTACACAGGTaGAAAGTGTATCCGCAGACC +
Preference number: 2 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKPELHR*KVYPQT
Trigger: GGTCTGCGGATACACTTTGCACCTGTGTAACTCTGG...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTCTAGAAACGTTTGCTaGCATACTCTTAACAGCATA +
Preference number: 2 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLSRNVC*HTLNSI
Trigger: TATGCTGTTAAGAGTATGCCAGCAAACGTTTCTAGA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTTTATTGGGATAACTaGCAGAGTTATAACTCCCAA +
Preference number: 2 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLYWDN*QSYNSQ
Trigger: TTGGGAGTTATAACTCTGCCAGTTATCCCAATAAAG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGAAACAGTGGGCCCATTaGACCAGTCGCATCTACCTT +
Preference number: 2 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKKQWAH*TSRIYL
Trigger: AAGGTAGATGCGACTGGTCCAATGGGCCCACTGTTT...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 90 bp TGTTATTCATGCCAAAGCAGCCCAACGCAATGTTCTATTGAAATGTaGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCT +
Preference number: 2 (lower is better)
Translates to: CYSCQSSPTQCSIEM*TIQISTRVSVGLCS
Trigger: AGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAACATTTCAATAGAACATTGCGTTGGGCTGCTTTGGCATGAATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 90 bp CTAGGCTGTCAACTTCTATGCCCAAATGGGAAGGGAATTTACACGTaGGGTGAGCTGGTTGAGATGGCTGTTAAAGTATGCTCTACAGCT +
Preference number: 2 (lower is better)
Translates to: LGCQLLCPNGKGIYT*GELVEMAVKVCSTA
Trigger: AGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGCATAGAAGTTGACAGCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp TCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTCTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 2 (lower is better)
Translates to: SVSSSCYTFRGSFPPVSSLLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...AGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR TCA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCTGCCAGCATTCTGAGTaGAATCATTCCCTACCCAAT +
Preference number: 2 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSCQHSE*NHSLPN
Trigger: ATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCA...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR GCA 90 bp CTTCTCTTATTTTTGCATCCAAGTCTGGCCAGTAAGTCCTTTTGGTGCTTGTGCAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LLLFLHPSLASKSFWCLCSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...GCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAAATAAGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CCA 90 bp TTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCTGTACACATACTGCTTaGCATCATCTATCACACTGT +
Preference number: 2 (lower is better)
Translates to: LERGLSLNRLEQFGCLVGCTHTA*HHLSHC
Trigger: ACAGTGTGATAGATGATGCCAAGCAGTATGTGTACA...GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CCA 90 bp CAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGAATACCAGTCCTTTTGCATCCAAGTCTaGCCAGTAAGTCCTTTTGGT +
Preference number: 2 (lower is better)
Translates to: QFGCLVGCKVLAYGEYQSFCIQV*PVSPFG
Trigger: ACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAA...GGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR TCA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT +
Preference number: 2 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSCSCRR*HRVLSS
Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR TCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGCATCGGAAGGTCATTTaGATTCCACAGGAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKHRKVI*IPQERE
Trigger: TTCTCTCTCCTGTGGAATTCAAATGACCTTCCGATG...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAAGATGCCTCCTTGTGTaGATATACAAAACAGTGGGC +
Preference number: 2 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKRCLLV*IYKTVG
Trigger: GCCCACTGTTTTGTATATTCACACAAGGAGGCATCT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp AACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTTGCTTCTCTTATTTTTaGATCCAAGTCTGGCCAGTA +
Preference number: 2 (lower is better)
Translates to: NRLEQFGCLVGCKVLAYGCFSYF*IQVWPV
Trigger: TACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCA...ACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR GCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGTTTCTGTGGGGCTGTaGTCTTTTCATCCACATTTG +
Preference number: 2 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKVSVGL*SFHPHL
Trigger: CAAATGTGGATGAAAAGAGCACAGCCCCACAGAAAC...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CCA 90 bp CAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGAATACCAGTCCCTTTCAAACTGCAGTTaGCTATTTCAGTGCAAATCG +
Preference number: 2 (lower is better)
Translates to: QFGCLVGCKVLAYGEYQSLSNCS*LFQCKS
Trigger: CGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAG...GGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAGACTTGATAGCTTGCTaGATATTAGCAGGTGGCTAC +
Preference number: 2 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKDLIAC*ILAGGY
Trigger: GTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTC...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAAGTATAGCCACAGGCTaGTGGGAAATGAGCTTCTAT +
Preference number: 2 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKSIATG*WEMSFY
Trigger: ATAGAAGCTCATTTCCCACCAGCCTGTGGCTATACT...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 90 bp TTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTaGGCATACGGTGAATACCAGTCCCTTTCAAACACATCTTTAAGT +
Preference number: 2 (lower is better)
Translates to: LNRLEQFGCLVGCKV*AYGEYQSLSNTSLS
Trigger: ACTTAAAGATGTGTTTGAAAGGGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR CAA 90 bp AGATGGGAATTCTCTCAAATGAGAAAGACAGGCTGCGAACTGGGGTaGATGTCAGGGCTATTCAAAAGCCTCCGTCCATTTAAGTCAATA +
Preference number: 2 (lower is better)
Translates to: RWEFSQMRKTGCELG*MSGLFKSLRPFKSI
Trigger: TATTGACTTAAATGGACGGAGGCTTTTGAATAGCCCTGACATCAACCCCAGTTCGCAGCCTGTCTTTCTCATTTGAGAGAATTCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 90 bp TTCTATGCCCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTaGAGATGGCTGTTAAAGTATGCTCTACAGCTCAATATGGGTTTG +
Preference number: 2 (lower is better)
Translates to: FYAQMGREFTRWVSW*RWLLKYALQLNMGL
Trigger: CAAACCCATATTGAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGCATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAATCCTGTGTGGGTCTTaGGAAAGGAACCATATAAAG +
Preference number: 2 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKILCGS*ERNHIK
Trigger: CTTTATATGGTTCCTTTCTCAAGACCCACACAGGAT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAAGCTCTAGAAACGTTTaGTGGCATACTCTTAACAGC +
Preference number: 2 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKSSRNV*WHTLNS
Trigger: GCTGTTAAGAGTATGCCAGCAAACGTTTCTAGAGCT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp TCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTTTGATTTCAATATTTTaGGAAGTCAGCTGGAGCAAC +
Preference number: 2 (lower is better)
Translates to: SVSSSCYTFRGSFPPVSSLISIF*EVSWSN
Trigger: GTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAA...AGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CCA 90 bp CACATACTGCTTGGCATCATCTATCACACTGTAGATGGCATCTATGTCAAAACTCTCCATAGAGTCTTTTaGACCAGGTTTGAGGCACTC +
Preference number: 2 (lower is better)
Translates to: HILLGIIYHTVDGIYVKTLHRVF*TRFEAL
Trigger: GAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAG...AGTTTTGACATAGATGCCATCTACAGTGTGATAGATGATGCCAAGCAGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCCCTATGAGTGTCCCATaGCTGTGGATGAATACTTCA +
Preference number: 2 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGPMSVP*LWMNTS
Trigger: TGAAGTATTCATCCACAGCCATGGGACACTCATAGG...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAAGCACACCAGTTCATTaGGAACAAGTACAGAAAGAT +
Preference number: 2 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKSTPVH*EQVQKD
Trigger: ATCTTTCTGTACTTGTTCCCAATGAACTGGTGTGCT...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCAAATATTTCCTACCGTaGCAACATCCTTGCGAGGTA +
Preference number: 2 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGKYFLP*QHPCEV
Trigger: TACCTCGCAAGGATGTTGTCACGGTAGGAAATATTT...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGCTTCAGGGGACAACTTaGGAACTAACAAATTTTAGT +
Preference number: 2 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKLQGTT*ELTNFS
Trigger: ACTAAAATTTGTTAGTTCTCAAGTTGTCCCCTGAAG...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp TCACCGATACAAATGCTTGAGATTTGGTTTCATTCAACTGAAGTTGCAATTTCTCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 2 (lower is better)
Translates to: SPIQMLEIWFHSTEVAISLPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...AGAAATTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467561.5
3UTR-3UTR GCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACAGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 2 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTDVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR TCA 90 bp AATCATCACCAAAGCCACGTTTACTTTATTGGGATAACTGGCAGAGTTATAACTCTATTCATGCTTAGCTaGCTGTGTAGGTCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: NHHQSHVYFIGITGRVITLFMLS*LCRSWR
Trigger: TCTCCAAGACCTACACAGTCAGCTAAGCATGAATAG...AGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR GCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCACTTTATTCCCAAAATaGAGACTTGATAGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGTLFPK*RLDSLL
Trigger: CAGCAAGCTATCAAGTCTGCATTTTGGGAATAAAGT...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 90 bp ACTCACCGATACAAATGCTTGAGATTTGGTTTCATTCAACTGAAGTaGCAATTTCTTTTCATTGTCATAGACTCCATAGAGTCTTTTGGA +
Preference number: 2 (lower is better)
Translates to: THRYKCLRFGFIQLK*QFLFIVIDSIESFG
Trigger: TCCAAAAGACTCTATGGAGTCTATGACAATGAAAAGAAATTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGGTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467561.5
3UTR CCA 72 bp GGTAGGCATCTGCTGCTGCTGCTTGGCAGAAAAGCCTaGGATGCGGCTCCTGGTGATAGCATTTTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: GRHLLLLLGRKA*DAAPGDSILPG
Trigger: GCCTGGCAAAATGCTATCACCAGGAGCCGCATCCCAGGCTTTTCTGCCAAGCAGCAGCAGCAGATGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 72 bp ACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTCCTaGCACTCTAGGCTGTCAACTTCTATGCCCAAATGG +
Preference number: 3 (lower is better)
Translates to: TLSLEPQTTRPS*HSRLSTSMPKW
Trigger: CCATTTGGGCATAGAAGTTGACAGCCTAGAGTGTCAGGACGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp GATTGCCAGTCCAAACCGGCACTGCCGATATACACGTaGTGTTTGTCCACGATCCAGAAGGAGGACTGCAGC +
Preference number: 3 (lower is better)
Translates to: DCQSKPALPIYT*CLSTIQKEDCS
Trigger: GCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTATTTTTCAAGGGTGTaGAAGGCTGGCATGAGATGT +
Preference number: 3 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNYFSRV*KAGMRC
Trigger: ACATCTCATGCCAGCCTTCAACACCCTTGAAAAATA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR TCA 72 bp GCACATACAGCAGATAGTGACAGTGAAGGGGCCCCATaGCACCAAGCCTATGAGTGTCCCATGGCTGTGGAT +
Preference number: 3 (lower is better)
Translates to: AHTADSDSEGAP*HQAYECPMAVD
Trigger: ATCCACAGCCATGGGACACTCATAGGCTTGGTGTCATGGGGCCCCTTCACTGTCACTATCTGCTGTATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp TCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTaGCGATATACACGTGCTGTTTGTCCACGATCCAGA +
Preference number: 3 (lower is better)
Translates to: SSVPGIASPNRH*RYTRAVCPRSR
Trigger: TCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTGTTCTATTGAAATGTaGACAATCCAGATCTCCACC +
Preference number: 3 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNCSIEM*TIQIST
Trigger: GGTGGAGATCTGGATTGTCAACATTTCAATAGAACA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp ATGAGACAAACAGTAGCACAGAGAGGGCCCGAATGGTaGCCAGAGTTACACAGGTGCAAAGTGTATCCGCAG +
Preference number: 3 (lower is better)
Translates to: MRQTVAQRGPEW*PELHRCKVYPQ
Trigger: CTGCGGATACACTTTGCACCTGTGTAACTCTGGGCACCATTCGGGCCCTCTCTGTGCTACTGTTTGTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp CTCGGCCGTCCTGACACTCTAGGCTGTCAACTTCTATaGCCAAATGGGAAGGGAATTTACACGTTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: LGRPDTLGCQLL*PNGKGIYTLGE
Trigger: CTCACCCAACGTGTAAATTCCCTTCCCATTTGGGCATAGAAGTTGACAGCCTAGAGTGTCAGGACGGCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp AGAGAGCTCACATGGCAGAAAACATGGTTTTGCTCCTaGAGGAGCTGTGGAGGTAGGGTCTCTCCAAGACAC +
Preference number: 3 (lower is better)
Translates to: RELTWQKTWFCS*RSCGGRVSPRH
Trigger: GTGTCTTGGAGAGACCCTACCTCCACAGCTCCTGCAGGAGCAAAACCATGTTTTCTGCCATGTGAGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp CAGTGTAGAGAGCTCACATGGCAGAAAACATGGTTTTaGTCCTGCAGGAGCTGTGGAGGTAGGGTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: QCRELTWQKTWF*SCRSCGGRVSP
Trigger: TGGAGAGACCCTACCTCCACAGCTCCTGCAGGAGCAAAACCATGTTTTCTGCCATGTGAGCTCTCTACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp GACATGAGACAAACAGTAGCACAGAGAGGGCCCGAATaGTGCCCAGAGTTACACAGGTGCAAAGTGTATCCG +
Preference number: 3 (lower is better)
Translates to: DMRQTVAQRGPE*CPELHRCKVYP
Trigger: CGGATACACTTTGCACCTGTGTAACTCTGGGCACCATTCGGGCCCTCTCTGTGCTACTGTTTGTCTCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTGCAGACTTGATAGCTaGCTGGATATTAGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLCRLDS*LDISRW
Trigger: CCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTATTTTTCAAGGGTGTaGAAGGCTGGCATGAGATGT +
Preference number: 3 (lower is better)
Translates to: GLRFESQSREQHWNWTSRYFSRV*KAGMRC
Trigger: ACATCTCATGCCAGCCTTCAACACCCTTGAAAAATA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CAA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAACCCCTGATTAGGGGCTaGCTGTGTCTGGTAGGCATC +
Preference number: 3 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKPLIRG*LCLVGI
Trigger: GATGCCTACCAGACACAGCAAGCCCCTAATCAGGGG...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGCTTCCTCTCCAATGGTaGGACAAGCAGAGATTCAAT +
Preference number: 3 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPLPLQW*DKQRFN
Trigger: ATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAG...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp CAGAGAGGGCCCGAATGGTGCCCAGAGTTACACAGGTaGAAAGTGTATCCGCAGACCTTTTGTTTCTTTGTC +
Preference number: 3 (lower is better)
Translates to: QRGPEWCPELHR*KVYPQTFCFFV
Trigger: GACAAAGAAACAAAAGGTCTGCGGATACACTTTGCACCTGTGTAACTCTGGGCACCATTCGGGCCCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp TTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCATATACACGTGCTGTTaGTCCACGATCCAGAAGGAG +
Preference number: 3 (lower is better)
Translates to: LERGLSLNRLEQFGCLVGIYTCC*STIQKE
Trigger: CTCCTTCTGGATCGTGGACAAACAGCACGTGTATAT...GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CAA 90 bp CTTCTCTTATTTTTGCATCCAAGTCTGGCCAGTAAGTCCTTTTGGTGCTTGTGCCATCTGTCCCAGGGATaGCCAGTCCAAACCGGCACT +
Preference number: 3 (lower is better)
Translates to: LLLFLHPSLASKSFWCLCHLSQG*PVQTGT
Trigger: AGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATG...GCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAAATAAGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CAA 90 bp GTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTTGAACATCTGTCCCAGGGATaGCCAGTCCAAACCGGCACT +
Preference number: 3 (lower is better)
Translates to: VIDSIESFGPGLRHSAFEHLSQG*PVQTGT
Trigger: AGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATG...TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR-3UTR CAA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATC +
Preference number: 3 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGTFKLQ*AISVQI
Trigger: GATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314833.10
3UTR-3UTR CAA 90 bp CAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGAATACCAGTCCTCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGT +
Preference number: 3 (lower is better)
Translates to: QFGCLVGCKVLAYGEYQSSSVAV*LERGLS
Trigger: ACTCAAACCCCTCTCCAACAAAACTGCCACAGACGA...GGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 3 (lower is better)
Translates to: GLRFESQSREQHWNWTSRSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR TCA 72 bp GTAAATCTAGGACCAGGCAGCTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCTGTCCCAGGGATTGCC +
Preference number: 3 (lower is better)
Translates to: VNLGPGSCSCRR*HRVLSSVPGIA
Trigger: GGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGCCTGGTCCTAGATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
3UTR TCA 72 bp GCCAAAGCAGCCCAACGCAATGTTCTATTGAAATGTTaGCAATCCAGATCTCCACCAGGGTTTCTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: AKAAQRNVLLKC*QSRSPPGFLWG
Trigger: GCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAACATTTCAATAGAACATTGCGTTGGGCTGCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp CCCCATGACACCAAGCCTATGAGTGTCCCATGGCTGTaGATGAATACTTCAGGGGACAACTTGAGAACTAAC +
Preference number: 3 (lower is better)
Translates to: PHDTKPMSVPWL*MNTSGDNLRTN
Trigger: GTTAGTTCTCAAGTTGTCCCCTGAAGTATTCATCCACAGCCATGGGACACTCATAGGCTTGGTGTCATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp TTGGGAGACATGAACCCATTTCTGACACTCTTGGTATaGGGGTCACTTTTCTGGCTGCCACAGAAGGACAGT +
Preference number: 3 (lower is better)
Translates to: LGDMNPFLTLLV*GSLFWLPQKDS
Trigger: ACTGTCCTTCTGTGGCAGCCAGAAAAGTGACCCCCATACCAAGAGTGTCAGAAATGGGTTCATGTCTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp TGGTGTTCAAACTCCCTAAAAGAGGGCCGTGATTGGTaGGGCCAGGTACCATCAAACAAGAATACCACTGCT +
Preference number: 3 (lower is better)
Translates to: WCSNSLKEGRDW*GQVPSNKNTTA
Trigger: AGCAGTGGTATTCTTGTTTGATGGTACCTGGCCCCACCAATCACGGCCCTCTTTTAGGGAGTTTGAACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGAGAGGGGTTTGAGTTaGAACAGGCTTGAGCAGTTC +
Preference number: 3 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSERGLS*NRLEQF
Trigger: GAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTC...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 3 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CAA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCGAGTCGGGAACAACATaGGAACTGGACATCCCGGCC +
Preference number: 3 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGESGTT*ELDIPA
Trigger: GGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTC...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp GCCCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTaGTTGAGATGGCTGTTAAAGTATGCTCTACAGCTC +
Preference number: 3 (lower is better)
Translates to: AQMGREFTRWVS*LRWLLKYALQL
Trigger: GAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp TTCTGGTGTTCAAACTCCCTAAAAGAGGGCCGTGATTaGTGGGGCCAGGTACCATCAAACAAGAATACCACT +
Preference number: 3 (lower is better)
Translates to: FWCSNSLKEGRD*WGQVPSNKNTT
Trigger: AGTGGTATTCTTGTTTGATGGTACCTGGCCCCACCAATCACGGCCCTCTTTTAGGGAGTTTGAACACCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCTTGATTTCAATATTTaGCGAAGTCAGCTGGAGCAA +
Preference number: 3 (lower is better)
Translates to: FESQSREQHWNWTSRPPALDFNI*RSQLEQ
Trigger: TTGCTCCAGCTGACTTCGCAAAATATTGAAATCAAG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
3UTR-3UTR CAA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGCTAGTGAAGCAATACTaGCAAATAACAAGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPLVKQY*QITRRE
Trigger: TTCCCTTCTTGTTATTTGCAAGTATTGCTTCACTAG...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 72 bp TACTTTCTGGTGTTCAAACTCCCTAAAAGAGGGCCGTaGTTGGTGGGGCCAGGTACCATCAAACAAGAATAC +
Preference number: 3 (lower is better)
Translates to: YFLVFKLPKRGP*LVGPGTIKQEY
Trigger: GTATTCTTGTTTGATGGTACCTGGCCCCACCAATCACGGCCCTCTTTTAGGGAGTTTGAACACCAGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp ACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGTATaGTCTACAGCTCAATATGGGTTTGCTGAGCAGACA +
Preference number: 3 (lower is better)
Translates to: TLGELVEMAVKV*STAQYGFAEQT
Trigger: TGTCTGCTCAGCAAACCCATATTGAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp TTAATGGGGAGTAGTCACCCTGCTCCTCATAATTTCTaGCATGGACATCCACCAGAGGGTGTCAAATTAACC +
Preference number: 3 (lower is better)
Translates to: LMGSSHPAPHNF*HGHPPEGVKLT
Trigger: GGTTAATTTGACACCCTCTGGTGGATGTCCATGCCAGAAATTATGAGGAGCAGGGTGACTACTCCCCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp CAGAATGAATCAGAGTCACTGAGTATAGCCACAGGCTaGTGGGAAATGAGCTTCTATCCATCCCAGGTTCAT +
Preference number: 3 (lower is better)
Translates to: QNESESLSIATG*WEMSFYPSQVH
Trigger: ATGAACCTGGGATGGATAGAAGCTCATTTCCCACCAGCCTGTGGCTATACTCAGTGACTCTGATTCATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCATGCTTCTCTTATTTTaGCATCCAAGTCTGGCCAGT +
Preference number: 3 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSMLLLF*HPSLAS
Trigger: ACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCAT...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CAA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCGGGGAGGACCTGGTGTaGATTCCATCAAGATATGAC +
Preference number: 3 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGGEDLV*IPSRYD
Trigger: GTCATATCTTGATGGAATCAACACCAGGTCCTCCCC...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATCAGGTCGCTTTTGTTaGTCTGAGTGTGAACTTGGT +
Preference number: 3 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKSGRFC*SECELG
Trigger: ACCAAGTTCACACTCAGACAAACAAAAGCGACCTGA...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATTACCACAGTACAGCTaGGTTACTGATGAGAGACTG +
Preference number: 3 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKLPQYS*VTDERL
Trigger: CAGTCTCTCATCAGTAACCAAGCTGTACTGTGGTAA...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 72 bp TCTGCCTGGTTGATAACAAGGCCCGTGCCAGCATTCTaGGTGAAATCATTCCCTACCCAATCAAAATTTCCA +
Preference number: 3 (lower is better)
Translates to: SAWLITRPVPAF*VKSFPTQSKFP
Trigger: TGGAAATTTTGATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCACGGGCCTTGTTATCAACCAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR TCA 72 bp GAAGAACCAGCTCTAGCACGACGTCTAGTTTTGTGTTaGTGTTATTCATGCCAAAGCAGCCCAACGCAATGT +
Preference number: 3 (lower is better)
Translates to: EEPALARRLVLC*CYSCQSSPTQC
Trigger: ACATTGCGTTGGGCTGCTTTGGCATGAATAACATCAACACAAAACTAGACGTCGTGCTAGAGCTGGTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR GCA 72 bp CAAAGATGGGAATTCTCTCAAATGAGAAAGACAGGCTaGGAACTGGGGTTGATGTCAGGGCTATTCAAAAGC +
Preference number: 3 (lower is better)
Translates to: QRWEFSQMRKTG*ELGLMSGLFKS
Trigger: GCTTTTGAATAGCCCTGACATCAACCCCAGTTCGCAGCCTGTCTTTCTCATTTGAGAGAATTCCCATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp TTGAGCAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTaGCATACGGTGAATACCAGTCCCTTTCAAACACAT +
Preference number: 3 (lower is better)
Translates to: LSSSAVWLAVRF*HTVNTSPFQTH
Trigger: ATGTGTTTGAAAGGGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR CCA 72 bp GGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATaGCTGTTAAAGTATGCTCTACAGCTCAATATGGGT +
Preference number: 3 (lower is better)
Translates to: GREFTRWVSWLR*LLKYALQLNMG
Trigger: ACCCATATTGAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 72 bp GAGATAGGTATAGTGTTTCAAAGATGCCTCCTTGTGTaGATATACAAAACAGTGGGCCCATTGGACCAGTCG +
Preference number: 3 (lower is better)
Translates to: EIGIVFQRCLLV*IYKTVGPLDQS
Trigger: CGACTGGTCCAATGGGCCCACTGTTTTGTATATTCACACAAGGAGGCATCTTTGAAACACTATACCTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp GCCTCCTTGTGTGAATATACAAAACAGTGGGCCCATTaGACCAGTCGCATCTACCTTCTTCATAATTTACCA +
Preference number: 3 (lower is better)
Translates to: ASLCEYTKQWAH*TSRIYLLHNLP
Trigger: TGGTAAATTATGAAGAAGGTAGATGCGACTGGTCCAATGGGCCCACTGTTTTGTATATTCACACAAGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp TTCAAAGATGCCTCCTTGTGTGAATATACAAAACAGTaGGCCCATTGGACCAGTCGCATCTACCTTCTTCAT +
Preference number: 3 (lower is better)
Translates to: FKDASLCEYTKQ*AHWTSRIYLLH
Trigger: ATGAAGAAGGTAGATGCGACTGGTCCAATGGGCCCACTGTTTTGTATATTCACACAAGGAGGCATCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp AACTTCTATGCCCAAATGGGAAGGGAATTTACACGTTaGGTGAGCTGGTTGAGATGGCTGTTAAAGTATGCT +
Preference number: 3 (lower is better)
Translates to: NFYAQMGREFTR*VSWLRWLLKYA
Trigger: AGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGCATAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 3 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAATTCCTTCCAGCTCTCTaGATCAACTGGTTAAATATC +
Preference number: 3 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKFLPAL*INWLNI
Trigger: GATATTTAACCAGTTGATCAAGAGAGCTGGAAGGAA...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 72 bp TTATTCATGCCAAAGCAGCCCAACGCAATGTTCTATTaGAATGTTGACAATCCAGATCTCCACCAGGGTTTC +
Preference number: 3 (lower is better)
Translates to: LFMPKQPNAMFY*NVDNPDLHQGF
Trigger: GAAACCCTGGTGGAGATCTGGATTGTCAACATTTCAATAGAACATTGCGTTGGGCTGCTTTGGCATGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp GTCCATGACAGCGATGTACACATACTGCTTGGCATCATCTATCACACTGTAGATCTTGATTTCAATATTTaGCGAAGTCAGCTGGAGCAA +
Preference number: 3 (lower is better)
Translates to: VHDSDVHILLGIIYHTVDLDFNI*RSQLEQ
Trigger: TTGCTCCAGCTGACTTCGCAAAATATTGAAATCAAG...ATCTACAGTGTGATAGATGATGCCAAGCAGTATGTGTACATCGCTGTCATGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGTCTTTTGGACCAGGTTaGAGGCACTCTGCTTTTGAA +
Preference number: 3 (lower is better)
Translates to: CRLDSLLDISRWLHNFSESFGPG*RHSAFE
Trigger: TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGA...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATTCAAAGATGCCTCCTaGTGTGAATATACAAAACAG +
Preference number: 3 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKFKDAS*CEYTKQ
Trigger: CTGTTTTGTATATTCACACAAGGAGGCATCTTTGAA...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAATAAAGCACTCCAAATaGTTTGGCTCAAGTAGGTTT +
Preference number: 3 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKIKHSK*FGSSRF
Trigger: AAACCTACTTGAGCCAAACAATTTGGAGTGCTTTAT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR TCA 72 bp AAGGCTGGCATGAGATGTAAGCTATTCATGCTTAGCTaGCTGTGTAGGTCTTGGAGACGATTTACAAGAATA +
Preference number: 3 (lower is better)
Translates to: KAGMRCKLFMLS*LCRSWRRFTRI
Trigger: TATTCTTGTAAATCGTCTCCAAGACCTACACAGTCAGCTAAGCATGAATAGCTTACATCTCATGCCAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR-3UTR CAA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACATCCTCGATCACTCTTTaGGCATTTAGAAATCAAGTC +
Preference number: 3 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTSSITL*AFRNQV
Trigger: GACTTGATTTCTAAATGCCAAAAGAGTGATCGAGGA...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp AAATGCAGACTTGATAGCTTGCTGGATATTAGCAGGTaGCTACATAATTTTTCTGAGCTTGAGAGAAAGGAT +
Preference number: 3 (lower is better)
Translates to: KCRLDSLLDISR*LHNFSELERKD
Trigger: ATCCTTTCTCTCAAGCTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR CCA 72 bp TCATCACCAAAGCCACGTTTACTTTATTGGGATAACTaGCAGAGTTATAACTCCCAACTCAAATATGGATTG +
Preference number: 3 (lower is better)
Translates to: SSPKPRLLYWDN*QSYNSQLKYGL
Trigger: CAATCCATATTTGAGTTGGGAGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp TGCAAAGCATCTCTTTACAGCATTCTTTTAAGTCAGTaGGGACATTTTCAGCATTCCTTGTTTCTATCAGGT +
Preference number: 3 (lower is better)
Translates to: CKASLYSILLSQ*GHFQHSLFLSG
Trigger: ACCTGATAGAAACAAGGAATGCTGAAAATGTCCCCACTGACTTAAAAGAATGCTGTAAAGAGATGCTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CCA 72 bp AGAATGTCTCATCTGCTTTTCAGAATTTTCCGCCCATaGGGAATAGGAGAGTCCATAAGGGAATTAATAATT +
Preference number: 3 (lower is better)
Translates to: RMSHLLFRIFRP*GIGESIRELII
Trigger: AATTATTAATTCCCTTATGGACTCTCCTATTCCCCATGGGCGGAAAATTCTGAAAAGCAGATGAGACATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATCTGTCACCATGTACTaGTTGCGATTTAACCTAGGA +
Preference number: 3 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRSVTMY*LRFNLG
Trigger: TCCTAGGTTAAATCGCAACAAGTACATGGTGACAGA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR TCA 72 bp ACCATGTACTTGTTGCGATTTAACCTAGGAAAGGTGTaGTTCTTTTGTTCTTTTGTAGCACAAGCATTCTCT +
Preference number: 3 (lower is better)
Translates to: TMYLLRFNLGKV*FFCSFVAQAFS
Trigger: AGAGAATGCTTGTGCTACAAAAGAACAAAAGAATCACACCTTTCCTAGGTTAAATCGCAACAAGTACATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR CCA 72 bp AGGGAAAACAACTCACCGATACAAATGCTTGAGATTTaGTTTCATTCAACTGAAGTTGCAATTTCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: RENNSPIQMLEI*FHSTEVAISFH
Trigger: ATGAAAAGAAATTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGGTGAGTTGTTTTCCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR GCA 90 bp GACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGACAGAAGTGCCCGGTaGGGCGGCGACGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: DTEFFHLSQGLPVQTGTADRSAR*GGDVAR
Trigger: CCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTC...GGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGCCGGATCTCCATCCTaGCATGACCGGGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRAGSPS*HDRAAA
Trigger: GGCGGCCGCCCGGTCATGTCAGGATGGAGATCCGGC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGACAGAAGTGCCCGGTaGGGCGGCGACGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LSQGLPVQTGTADIHVLFDRSAR*GGDVAR
Trigger: CCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTC...AAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTCCGGGGAGACAGAAGTaGCCGGTGCGGCGGCGACGT +
Preference number: 4 (lower is better)
Translates to: VHDPEGGLQPALVVSGHVPGRQK*PVRRRR
Trigger: ACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCCGG...AACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGATCTCCATCCTGACATaGCCGGGCGGCCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRISILT*PGGRRR
Trigger: TCGCCGGCGGCCGCCCGGTCATGTCAGGATGGAGAT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGACCGGGGAGACAGAAGTaGCCGGTGCGGCGGCGACGT +
Preference number: 4 (lower is better)
Translates to: ASPNRHCRYTRAVCPRSRPGRQK*PVRRRR
Trigger: ACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCCGG...TCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGATCTCCATCCTGACATaGCCGGGCGGCCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPISILT*PGGRRR
Trigger: TCGCCGGCGGCCGCCCGGTCATGTCAGGATGGAGAT...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACGCTTCCCACAGCCTCTaGAGCCTTCAGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNASHSL*SLQRQR
Trigger: TCTCTGCCTCTGAAGGCTCCAGAGGCTGTGGGAAGC...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000427495.5
CDS-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACCACAGAAGGACAGTGTaGCCCCATGGAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNHRRTV*PHGVTT
Trigger: GGTGGTGACTCCATGGGGCCACACTGTCCTTCTGTG...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp GTCACCACCGCTGCCCAGACTCCCCTGATTAGGGGCTaGCTGTGTCTGGTAGGCATCTGCTGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VTTAAQTPLIRG*LCLVGICCCCL
Trigger: CAAGCAGCAGCAGCAGATGCCTACCAGACACAGCAAGCCCCTAATCAGGGGAGTCTGGGCAGCGGTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGAATCTCCATCCTGACATaGCCGGGCGGCCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: QTGTADIHVLFVHDPEGGISILT*PGGRRR
Trigger: TCGCCGGCGGCCGCCCGGTCATGTCAGGATGGAGAT...TCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp AAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACATCTCCATCCTGACATaGCCGGGCGGCCGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: KPALPIYTCCLSTIQKEDISILT*PGGRRR
Trigger: TCGCCGGCGGCCGCCCGGTCATGTCAGGATGGAGAT...GTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp CTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTGCCGAGAGCCACTCGTaGTGCCGGATCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LFVHDPEGGLQPALVVSGAESHS*CRISIL
Trigger: CAGGATGGAGATCCGGCAGCACGAGTGGCTCTCGGC...ACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAGCCGAGAGCCACTCGTaGTGCCGGATCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGAESHS*CRISIL
Trigger: CAGGATGGAGATCCGGCAGCACGAGTGGCTCTCGGC...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACCTTTTGAGCCTCATCTaGTCGAAGCCCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNLLSLI*SKPSWG
Trigger: CCCCCATGAGGGCTTCGAGCAGATGAGGCTCAAAAG...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTGCTCGAAGCCCTCATaGGGGGAGGCCGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLCSKPS*GEAESH
Trigger: GTGGCTCTCGGCCTCCCCCCATGAGGGCTTCGAGCA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp TGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGTGCTCGAAGCCCTCATaGGGGGAGGCCGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CQSKPALPIYTCCLSTIQCSKPS*GEAESH
Trigger: GTGGCTCTCGGCCTCCCCCCATGAGGGCTTCGAGCA...CTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAGACAGTGTGGCCCCATaGAGTCACCACCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGDSVAP*SHHRCP
Trigger: TGGGCAGCGGTGGTGACTCCATGGGGCCACACTGTC...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp CAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTaGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: QSKPALPIYTCC*STIQKEDCSRP
Trigger: GGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp GCAGCTGCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGGCCGGATCTCCATCCTaGCATGACCGGGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AAAVVEDDTEFFHLSQGLAGSPS*HDRAAA
Trigger: GGCGGCCGCCCGGTCATGTCAGGATGGAGATCCGGC...CAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTGTAGTCCTGCTGCTTaGCGCTGCTGTAGAAGTTCG +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNCSPAA*RCCRSS
Trigger: CGAACTTCTACAGCAGCGTCAAGCAGCAGGACTACA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATGACACCAAGCCTATaGGTGTCCCATGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNMTPSL*VSHGCG
Trigger: TCCACAGCCATGGGACACTCATAGGCTTGGTGTCAT...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACGTAGGCATCTGCTGCTaGTGCTTGGCAGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNVGICC*CLAEKP
Trigger: AGGCTTTTCTGCCAAGCAGCAGCAGCAGATGCCTAC...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACAGTCGGGAACAACATTaGAACTGGACATCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNSREQH*NWTSRP
Trigger: TGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACT...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCCTTGGGGCGGCTTTTaGGCCTCATCTGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLPWGGF*ASSARS
Trigger: GCTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAGAGCTGTCGCTGATGTaGTGCTTCCCACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HVLFVHDPEGGLQPALVVELSLM*CFPQPL
Trigger: CAGAGGCTGTGGGAAGCAGCACATCAGCGACAGCTC...TACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTTCCTCACATCTGCCTaGTTGATAACAAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNFLTSA*LITRPV
Trigger: CACGGGCCTTGTTATCAACCAGGCAGATGTGAGGAA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTTCCGAAGCCAGACGCTaGCGCTGTAGTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSQGLPVQTGTADIHVLFSEARR*RCSPAA
Trigger: AGCAGCAGGACTACAGCGCCAGCGTCTGGCTTCGGA...AAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACGCAGACTTGATAGCTTaGTGGATATTAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNADLIA*WILAGG
Trigger: GCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGC...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp ACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTCTTTTGAGCCTCATCTaGTCGAAGCCCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TRAVCPRSRRRTAAGPCCLLSLI*SKPSWG
Trigger: CCCCCATGAGGGCTTCGAGCAGATGAGGCTCAAAAG...ACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACCAGAAAACATGGTTTTaGTCCTGCAGGAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNQKTWF*SCRSCG
Trigger: TCCACAGCTCCTGCAGGAGCAAAACCATGTTTTCTG...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTTCCGAAGCCAGACGCTaGCGCTGTAGTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPASEARR*RCSPAA
Trigger: AGCAGCAGGACTACAGCGCCAGCGTCTGGCTTCGGA...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
3UTR CAA 72 bp AGAGAAGCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTaGAGTCACAGAGTCGGGAACAACATTGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: REARGQAVRGSA*SHRVGNNIGTG
Trigger: TCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACGGTTTTGGCATACGGTaGATACCAGTCCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNGFGIR*IPVPFK
Trigger: TTTGAAAGGGACTGGTATTCACCGTATGCCAAAACC...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCACCTGCTGTGGGCTCTaGAGAGGCCATGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AVVEDDTEFFHLSQGLPVTCCGL*RGHASP
Trigger: GGGAGAGGCATGGCCTCTTCAGAGCCCACAGCAGGT...GACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR TCA 90 bp GTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTTGAAGCCGGATCTCCATCCTaGCATGACCGGGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VIDSIESFGPGLRHSAFEAGSPS*HDRAAA
Trigger: GGCGGCCGCCCGGTCATGTCAGGATGGAGATCCGGC...TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp TTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACCCTTGGGGCGGCTTTTaGGCCTCATCTGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: FFHLSQGLPVQTGTADIHPWGGF*ASSARS
Trigger: GCTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGG...GTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 4 (lower is better)
Translates to: ASPNRHCRYTRAVCPRSRICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...TCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp CTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 4 (lower is better)
Translates to: LSQGLPVQTGTADIHVLFICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...AAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACGTTTCTGTGGGGCTGTaGTCTTTTCATCCACATTTG +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNVSVGL*SFHPHL
Trigger: CAAATGTGGATGAAAAGAGCACAGCCCCACAGAAAC...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGCTTCCCACAGCCTCTaGAGCCTTCAGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SKPALPIYTCCLSTIQKEASHSL*SLQRQR
Trigger: TCTCTGCCTCTGAAGGCTCCAGAGGCTGTGGGAAGC...CTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR CCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGCTTGGCAGAAAAGCCTaGGATGCGGCTCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPLGRKA*DAAPGD
Trigger: ATCACCAGGAGCCGCATCCCAGGCTTTTCTGCCAAG...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp ATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTCCCGTGCCAGCATTCTaGGTGAAATCATTCCCTACC +
Preference number: 4 (lower is better)
Translates to: ICPRDCQSKPALPIYTCCPVPAF*VKSFPT
Trigger: GGTAGGGAATGATTTCACTCAGAATGCTGGCACGGG...ACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp CCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCAAGCTTCCTAACAACTaGCCGGGTAGGTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PRDCQSKPALPIYTCCLSKLPNN*PGRSAE
Trigger: TTCTGCTGACCTACCCGGTCAGTTGTTAGGAAGCTT...GGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp CACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAAGCTTCCTAACAACTaGCCGGGTAGGTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HVLFVHDPEGGLQPALVVKLPNN*PGRSAE
Trigger: TTCTGCTGACCTACCCGGTCAGTTGTTAGGAAGCTT...TACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGAAGCTTCCTAACAACTaGCCGGGTAGGTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRKLPNN*PGRSAE
Trigger: TTCTGCTGACCTACCCGGTCAGTTGTTAGGAAGCTT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACAAATATTTCCTACCGTaGCAACATCCTTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNKYFLP*QHPCEV
Trigger: TACCTCGCAAGGATGTTGTCACGGTAGGAAATATTT...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp TGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGTGTAGTCCTGCTGCTTaGCGCTGCTGTAGAAGTTCG +
Preference number: 4 (lower is better)
Translates to: CQSKPALPIYTCCLSTIQCSPAA*RCCRSS
Trigger: CGAACTTCTACAGCAGCGTCAAGCAGCAGGACTACA...CTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTGTAGTCCTGCTGCTTaGCGCTGCTGTAGAAGTTCG +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLCSPAA*RCCRSS
Trigger: CGAACTTCTACAGCAGCGTCAAGCAGCAGGACTACA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAGAGTCACCATTACGGTaGCTGTGTCTATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGESPLR*LCLFWL
Trigger: CAGCCAGAATAGACACAGTCACCGTAATGGTGACTC...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGACTTCTGCTGGGACATTaGGACCAATCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGLLLGH*DQSSFP
Trigger: AGGGAAGGAAGATTGGTCGCAATGTCCCAGCAGAAG...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000427495.5
CDS-3UTR GCA 90 bp ACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 4 (lower is better)
Translates to: TRAVCPRSRRRTAAGPCCLPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...ACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPAICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGACAGAAGTGCCCGGTaGGGCGGCGACGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEDRSAR*GGDVAR
Trigger: CCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTTTCCTCACATCTGCCTaGTTGATAACAAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: VHDPEGGLQPALVVSGHVFLTSA*LITRPV
Trigger: CACGGGCCTTGTTATCAACCAGGCAGATGTGAGGAA...AACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGGAACAACATTGGAACTaGACATCCCGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLEQHWN*TSRPPA
Trigger: AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTC...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGAGTCGGGAACAACATTaGAACTGGACATCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPSREQH*NWTSRP
Trigger: TGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACT...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCATCCGAAGCCAGACGCTaGCGCTGTAGTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPSEARR*RCSPAA
Trigger: AGCAGCAGGACTACAGCGCCAGCGTCTGGCTTCGGA...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp CGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RGSFPPVSSVAV*LERGLSLNRLE
Trigger: CTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGGAAAGGATCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCCCGTGCCAGCATTCTaGGTGAAATCATTCCCTACC +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPAPVPAF*VKSFPT
Trigger: GGTAGGGAATGATTTCACTCAGAATGCTGGCACGGG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAGAGTTTGAACAGGCTTaGGCAGTTCGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: ASPNRHCRYTRAVCPRSREFEQA*AVRLFG
Trigger: ACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTC...TCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAACCTGCTGTGGGCTCTaGAGAGGCCATGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKTCCGL*RGHASP
Trigger: GGGAGAGGCATGGCCTCTTCAGAGCCCACAGCAGGT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGCCGGATCTCCATCCTaGCATGACCGGGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEAGSPS*HDRAAA
Trigger: GGCGGCCGCCCGGTCATGTCAGGATGGAGATCCGGC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGATCACGATGCACTTCTaGTGGGACATTGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRITMHF*WDIATN
Trigger: ATTGGTCGCAATGTCCCAGCAGAAGTGCATCGTGAT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000427495.5
CDS-3UTR GCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPLPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSQGLPVQTGTADIHVLFSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...AAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTGCTTCTCTTATTTTTaGATCCAAGTCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNCFSYF*IQVWPV
Trigger: TACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGTTGTTCCTCACATCTaGCTGGTTGATAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRVVPHI*LVDNKA
Trigger: GGCCTTGTTATCAACCAGGCAGATGTGAGGAACAAC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGCAGACTTGATAGCTTaGTGGATATTAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRADLIA*WILAGG
Trigger: GCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTGACAGAAGTGCCCGGTaGGGCGGCGACGTCGCCCGG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPDRSAR*GGDVAR
Trigger: CCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTC...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCGAGAGCCACTCGTGCTaGCGGATCTCCATCCTGACA +
Preference number: 4 (lower is better)
Translates to: AVVEDDTEFFHLSQGLPVESHSC*RISILT
Trigger: TGTCAGGATGGAGATCCGGCAGCACGAGTGGCTCTC...GACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAGCCGAGAGCCACTCGTaGTGCCGGATCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKAESHS*CRISIL
Trigger: CAGGATGGAGATCCGGCAGCACGAGTGGCTCTCGGC...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp TTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCCTTTTGAGCCTCATCTaGTCGAAGCCCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: LERGLSLNRLEQFGCLVGLLSLI*SKPSWG
Trigger: CCCCCATGAGGGCTTCGAGCAGATGAGGCTCAAAAG...GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366545.5
CDS-3UTR GCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATCTTTGATGGTGTGTaGAATGATTTGATTTGGCGG +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNIFDGV*NDLIWR
Trigger: CCGCCAAATCAAATCATTGCACACACCATCAAAGAT...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTAGTCGGGAACAACATTaGAACTGGACATCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPASREQH*NWTSRP
Trigger: TGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CTTCTCTTATTTTTGCATCCAAGTCTGGCCAGTAAGTCCTTTTGGTGCTTGTGCTGCTCGAAGCCCTCATaGGGGGAGGCCGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLLFLHPSLASKSFWCLCCSKPS*GEAESH
Trigger: GTGGCTCTCGGCCTCCCCCCATGAGGGCTTCGAGCA...GCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAAATAAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366545.5
CDS-3UTR CCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGCTCCTCATAATTTCTaGCATGGACATCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRAPHNF*HGHPPE
Trigger: CTCTGGTGGATGTCCATGCCAGAAATTATGAGGAGC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAGAATATACAAAACAGTaGGCCCATTGGACCAGTCGC +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGEYTKQ*AHWTSR
Trigger: GCGACTGGTCCAATGGGCCCACTGTTTTGTATATTC...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGACTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGLLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp CACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTATGCCAGCATTCTGAGTaGAATCATTCCCTACCCAAT +
Preference number: 4 (lower is better)
Translates to: HVLFVHDPEGGLQPALVVCQHSE*NHSLPN
Trigger: ATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCA...TACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGATGCCAGCATTCTGAGTaGAATCATTCCCTACCCAAT +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGCQHSE*NHSLPN
Trigger: ATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCA...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp TCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCACCCGTGCCAGCATTCTaGGTGAAATCATTCCCTACC +
Preference number: 4 (lower is better)
Translates to: SSSCYTFRGSFPPVSSVAPVPAF*VKSFPT
Trigger: GGTAGGGAATGATTTCACTCAGAATGCTGGCACGGG...TGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGGTTTTGGCATACGGTaGATACCAGTCCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRGFGIR*IPVPFK
Trigger: TTTGAAAGGGACTGGTATTCACCGTATGCCAAAACC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTACTTCTACGCCAGAATaGCATTCTCTGTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VHDPEGGLQPALVVSGHVTSTPE*HSLSEV
Trigger: TACCTCTGACAGAGAATGTCATTCTGGCGTAGAAGT...AACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAACCTTGGGGCGGCTTTTaGGCCTCATCTGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKPWGGF*ASSARS
Trigger: GCTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGG...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTTCACCTCGGCTCCTTTaGATCAGCTGTTACATCACT +
Preference number: 4 (lower is better)
Translates to: LSQGLPVQTGTADIHVLFSPRLL*ISCYIT
Trigger: AGTGATGTAACAGCTGATTCAAAGGAGCCGAGGTGA...AAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR GCA 90 bp ATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTATCACGATGCACTTCTaGTGGGACATTGCGACCAAT +
Preference number: 4 (lower is better)
Translates to: ICPRDCQSKPALPIYTCCITMHF*WDIATN
Trigger: ATTGGTCGCAATGTCCCAGCAGAAGTGCATCGTGAT...ACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR GCA 90 bp TCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 4 (lower is better)
Translates to: SKPALPIYTCCLSTIQKELPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...CTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp GGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 4 (lower is better)
Translates to: GLPVQTGTADIHVLFVHDLPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...ATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTCCGGGGAGACAGAAGTaGCCGGTGCGGCGGCGACGT +
Preference number: 4 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSPGRQK*PVRRRR
Trigger: ACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCCGG...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp ATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGTTCCTCACATCTGCCTaGTTGATAACAAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: MTPSSFICPRDCQSKPALFLTSA*LITRPV
Trigger: CACGGGCCTTGTTATCAACCAGGCAGATGTGAGGAA...CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GCAGCTGCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCGCCTGTGTCGTCTGTaGCAGTTTTGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: AAAVVEDDTEFFHLSQGLRLCRL*QFCWRG
Trigger: CCCTCTCCAACAAAACTGCCACAGACGACACAGGCG...CAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACCTGGATATTAGCAGGTaGCTACATAATTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNLDISR*LHNFSE
Trigger: CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAG...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCGACTTGATAGCTTGCTaGATATTAGCAGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: PRDCQSKPALPIYTCCLSDLIAC*ILAGGY
Trigger: GTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTC...GGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAGACTTGATAGCTTGCTaGATATTAGCAGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGDLIAC*ILAGGY
Trigger: GTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTC...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTCTAGAAACGTTTGCTaGCATACTCTTAACAGCATA +
Preference number: 4 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNSRNVC*HTLNSI
Trigger: TATGCTGTTAAGAGTATGCCAGCAAACGTTTCTAGA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGACCTATGAGTGTCCCATaGCTGTGGATGAATACTTCA +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGPMSVP*LWMNTS
Trigger: TGAAGTATTCATCCACAGCCATGGGACACTCATAGG...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRCSCRR*HRVLSS
Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp CGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTCATGTCTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: RSRRRTAAGPCCKRSCSCLLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...ACATGAACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGAAATATTTCCTACCGTaGCAACATCCTTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRKYFLP*QHPCEV
Trigger: TACCTCGCAAGGATGTTGTCACGGTAGGAAATATTT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp TTTCATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCCCTTGGGGCGGCTTTTaGGCCTCATCTGCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: FHCHRLHRVFWTRFEALCPWGGF*ASSARS
Trigger: GCTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGG...GCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTCAATATGGGTTTGCTaGGCAGACACTAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPSIWVC*ADTRFS
Trigger: AGAGAACCTAGTGTCTGCTCAGCAAACCCATATTGA...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp TCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGCAGACTTGATAGCTTaGTGGATATTAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SKPALPIYTCCLSTIQKEADLIA*WILAGG
Trigger: GCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGC...CTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp GTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTAGCTCTAGAAACGTTTaGTGGCATACTCTTAACAGC +
Preference number: 4 (lower is better)
Translates to: VHDPEGGLQPALVVSGHVSSRNV*WHTLNS
Trigger: GCTGTTAAGAGTATGCCAGCAAACGTTTCTAGAGCT...AACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR GCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAAGCTCTAGAAACGTTTaGTGGCATACTCTTAACAGC +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGSSRNV*WHTLNS
Trigger: GCTGTTAAGAGTATGCCAGCAAACGTTTCTAGAGCT...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAAGAGGGCCCGAATGGTaGCCAGAGTTACACAGGTGC +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKRGPEW*PELHRC
Trigger: GCACCTGTGTAACTCTGGGCACCATTCGGGCCCTCT...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTATGAGAAAGACAGGCTaGGAACTGGGGTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPAMRKTG*ELGLMS
Trigger: TGACATCAACCCCAGTTCGCAGCCTGTCTTTCTCAT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACCTCCATAGAGTCTTTTaGACCAGGTTTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: KPALPIYTCCLSTIQKEDLHRVF*TRFEAL
Trigger: GAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAG...GTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCTCCATAGAGTCTTTTaGACCAGGTTTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPALHRVF*TRFEAL
Trigger: GAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTTGGCTGTAAGGTTTTaGCATACGGTGAATACCAGT +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRLAVRF*HTVNTS
Trigger: ACTGGTATTCACCGTATGCCAAAACCTTACAGCCAA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCAGAACAACATTGGAACTaGACATCCCGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPEQHWN*TSRPPA
Trigger: AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTC...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGTGCTCGAAGCCCTCATaGGGGGAGGCCGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSECSKPS*GEAESH
Trigger: GTGGCTCTCGGCCTCCCCCCATGAGGGCTTCGAGCA...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCACCACCAGGGTTTCTGTaGGGCTGTGCTCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPPPGFL*GCALFI
Trigger: GATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGG...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAACAGAGAGGGCCCGAATaGTGCCCAGAGTTACACAGG +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKQRGPE*CPELHR
Trigger: CCTGTGTAACTCTGGGCACCATTCGGGCCCTCTCTG...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGAGAATTTTCCGCCCATaGGGAATAGGAGAGTCCATA +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLRIFRP*GIGESI
Trigger: TATGGACTCTCCTATTCCCCATGGGCGGAAAATTCT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGAGGGCCGTGATTGGTaGGGCCAGGTACCATCAAAC +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKEGRDW*GQVPSN
Trigger: GTTTGATGGTACCTGGCCCCACCAATCACGGCCCTC...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp TCGTCTGTGGCAGTTTTGTTGGAGAGGGGTTTGAGTTaGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SSVAVLLERGLS*NRLEQFGCLVG
Trigger: GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPCSCRR*HRVLSS
Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp AAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACCTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KPALPIYTCCLSTIQKEDLLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...GTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPALLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCTGCCAGCATTCTGAGTaGAATCATTCCCTACCCAAT +
Preference number: 4 (lower is better)
Translates to: DCQSKPALPIYTCCLSTICQHSE*NHSLPN
Trigger: ATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCA...GATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp TTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGGTTTTGGCATACGGTaGATACCAGTCCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LPVQTGTADIHVLFVHDPGFGIR*IPVPFK
Trigger: TTTGAAAGGGACTGGTATTCACCGTATGCCAAAACC...TGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCTATTCATGCTTAGCTaGCTGTGTAGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPALFMLS*LCRSWR
Trigger: TCTCCAAGACCTACACAGTCAGCTAAGCATGAATAG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGACCTGCTGTGGGCTCTaGAGAGGCCATGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSETCCGL*RGHASP
Trigger: GGGAGAGGCATGGCCTCTTCAGAGCCCACAGCAGGT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAAGTGAAGGGGCCCCATaGCACCAAGCCTATGAGTGT +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKSEGAP*HQAYEC
Trigger: ACACTCATAGGCTTGGTGTCATGGGGCCCCTTCACT...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCCTGCCCAGACTCCCCTaGTTAGGGGCTTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGLPRLP*LGACCV
Trigger: GACACAGCAAGCCCCTAATCAGGGGAGTCTGGGCAG...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCAAAAGGAATGGGTTTaGGAGCCAGATATCCACTTC +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPAQKEWV*EPDIHF
Trigger: GAAGTGGATATCTGGCTCTCAAACCCATTCCTTTTG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp GCAGCTGCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: AAAVVEDDTEFFHLSQGLSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...CAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp GACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCTGCTTCTCTTATTTTTaGATCCAAGTCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: DTEFFHLSQGLPVQTGTACFSYF*IQVWPV
Trigger: TACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCA...GGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp TTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCGCAGACTTGATAGCTTaGTGGATATTAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LERGLSLNRLEQFGCLVGADLIA*WILAGG
Trigger: GCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGC...GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGACCGGGGAGACAGAAGTaGCCGGTGCGGCGGCGACGT +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRPGRQK*PVRRRR
Trigger: ACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCCGG...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCTGTACACATACTGCTTaGCATCATCTATCACACTGT +
Preference number: 4 (lower is better)
Translates to: PRDCQSKPALPIYTCCLSCTHTA*HHLSHC
Trigger: ACAGTGTGATAGATGATGCCAAGCAGTATGTGTACA...GGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTTTTGCATCCAAGTCTaGCCAGTAAGTCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLFCIQV*PVSPFG
Trigger: ACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCTTTCAAACTGCAGTTaGCTATTTCAGTGCAAATCG +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRLSNCS*LFQCKS
Trigger: CGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAG...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGACTTTCAAACTGCAGTTaGCTATTTCAGTGCAAATCG +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGLSNCS*LFQCKS
Trigger: CGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAG...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTTGGCTGTAAGGTTTTaGCATACGGTGAATACCAGT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLAVRF*HTVNTS
Trigger: ACTGGTATTCACCGTATGCCAAAACCTTACAGCCAA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAACGCCTGTGTCGTCTGTaGCAGTTTTGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKRLCRL*QFCWRG
Trigger: CCCTCTCCAACAAAACTGCCACAGACGACACAGGCG...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp ATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTTTCCGAAGCCAGACGCTaGCGCTGTAGTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IVIDSIESFGPGLRHSAFSEARR*RCSPAA
Trigger: AGCAGCAGGACTACAGCGCCAGCGTCTGGCTTCGGA...AAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTATTTGTTTTCCTTTGTaGATTCTGGGGGAGGACCTG +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPAICFPL*ILGEDL
Trigger: CAGGTCCTCCCCCAGAATCCACAAAGGAAAACAAAT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCACTGACACTCTTGGTATaGGGGTCACTTTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPLTLLV*GSLFWL
Trigger: CAGCCAGAAAAGTGACCCCCATACCAAGAGTGTCAG...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGCCCGTGCCAGCATTCTaGGTGAAATCATTCCCTACC +
Preference number: 4 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKPVPAF*VKSFPT
Trigger: GGTAGGGAATGATTTCACTCAGAATGCTGGCACGGG...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGAGTTTGAACAGGCTTaGGCAGTTCGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SVSSSCYTFRGSFPPVSSEFEQA*AVRLFG
Trigger: ACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTC...AGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp TTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACACTTCTACGCCAGAATaGCATTCTCTGTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: FFHLSQGLPVQTGTADIHTSTPE*HSLSEV
Trigger: TACCTCTGACAGAGAATGTCATTCTGGCGTAGAAGT...GTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTTGCAACAGGAAGCTGTaGATTTGTTTTCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPACNRKL*ICFPLW
Trigger: CCACAAAGGAAAACAAATTCACAGCTTCCTGTTGCA...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCTTCAGGGGACAACTTaGGAACTAACAAATTTTAGT +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRLQGTT*ELTNFS
Trigger: ACTAAAATTTGTTAGTTCTCAAGTTGTCCCCTGAAG...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGAAAAGGAAATGGCAATaGTGGTCATTCCGTAATGGA +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLKRKWQ*WSFRNG
Trigger: TCCATTACGGAATGACCATCATTGCCATTTCCTTTT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTCTTCAAGAAACTTCTaGGGAATACCCATTGAGTCA +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPSSRNF*GIPIES
Trigger: TGACTCAATGGGTATTCCTCAGAAGTTTCTTGAAGA...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTAGTGGGGTCTCTATaGTTGTTTCTTTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLVGSL*LFLFLT
Trigger: AGTGAGAAAAAGAAACAATCATAGAGACCCCACTAG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCATTTCCAATATAAGCTaGTCCATCTGTCACCATGTA +
Preference number: 4 (lower is better)
Translates to: PRDCQSKPALPIYTCCLSISNIS*SICHHV
Trigger: TACATGGTGACAGATGGAGCAGCTTATATTGGAAAT...GGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAATTTCCAATATAAGCTaGTCCATCTGTCACCATGTA +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGISNIS*SICHHV
Trigger: TACATGGTGACAGATGGAGCAGCTTATATTGGAAAT...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: ASPNRHCRYTRAVCPRSRDVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...TCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp GGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGAGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: GIASPNRHCRYTRAVCPRDVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...TCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGACTTTATTCCCAAAATaGAGACTTGATAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLRFESQSREQHWNWTSRTLFPK*RLDSLL
Trigger: CAGCAAGCTATCAAGTCTGCATTTTGGGAATAAAGT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTAGCTCTAGAAACGTTTaGTGGCATACTCTTAACAGC +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPASSRNV*WHTLNS
Trigger: GCTGTTAAGAGTATGCCAGCAAACGTTTCTAGAGCT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAACATGGTTTTGCTCCTaGAGGAGCTGTGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKTWFCS*RSCGGR
Trigger: CCTACCTCCACAGCTCCTGCAGGAGCAAAACCATGT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTGTACACATACTGCTTaGCATCATCTATCACACTGT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLCTHTA*HHLSHC
Trigger: ACAGTGTGATAGATGATGCCAAGCAGTATGTGTACA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp AAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTTTTGCATCCAAGTCTaGCCAGTAAGTCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: KPALPIYTCCLSTIQKEDFCIQV*PVSPFG
Trigger: ACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAA...GTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp ATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGTTTTGCATCCAAGTCTaGCCAGTAAGTCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: MTPSSFICPRDCQSKPALFCIQV*PVSPFG
Trigger: ACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAA...CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCTTTCAAACTGCAGTTaGCTATTTCAGTGCAAATCG +
Preference number: 4 (lower is better)
Translates to: ALPIYTCCLSTIQKEDCSLSNCS*LFQCKS
Trigger: CGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAG...GCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp TCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGTTGGCTGTAAGGTTTTaGCATACGGTGAATACCAGT +
Preference number: 4 (lower is better)
Translates to: SKPALPIYTCCLSTIQKELAVRF*HTVNTS
Trigger: ACTGGTATTCACCGTATGCCAAAACCTTACAGCCAA...CTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGACTGGATATTAGCAGGTaGCTACATAATTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGLDISR*LHNFSE
Trigger: CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAG...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR CAA 72 bp TGCCAAAGCAGCCCAACGCAATGTTCTATTGAAATGTaGACAATCCAGATCTCCACCAGGGTTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CQSSPTQCSIEM*TIQISTRVSVG
Trigger: CCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAACATTTCAATAGAACATTGCGTTGGGCTGCTTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: FFHLSQGLPVQTGTADIHCSCRR*HRVLSS
Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...GTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp CAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGAATACCAGTCCCTATTCATGCTTAGCTaGCTGTGTAGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QFGCLVGCKVLAYGEYQSLFMLS*LCRSWR
Trigger: TCTCCAAGACCTACACAGTCAGCTAAGCATGAATAG...GGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAATCCCATGGCTGTGGATaGATACTTCAGGGGACAACT +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKSHGCG*ILQGTT
Trigger: AGTTGTCCCCTGAAGTATTCATCCACAGCCATGGGA...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAGCTGCGAACTGGGGTTaGTGTCAGGGCTATTCAAAA +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKAANWG*CQGYSK
Trigger: TTTTGAATAGCCCTGACATCAACCCCAGTTCGCAGC...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTCCTAAAAGAGGGCCGTaGTTGGTGGGGCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPPKRGP*LVGPGT
Trigger: GGTACCTGGCCCCACCAATCACGGCCCTCTTTTAGG...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTTGATTTCAATATTTTaGGAAGTCAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLISIF*EVSWSN
Trigger: GTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp TTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCATGCTTCTCTTATTTTTaGATCCAAGTCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LPVQTGTADIHVLFVHDPCFSYF*IQVWPV
Trigger: TACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCA...TGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGATTTCCAATATAAGCTaGTCCATCTGTCACCATGTA +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLISNIS*SICHHV
Trigger: TACATGGTGACAGATGGAGCAGCTTATATTGGAAAT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGTTGTTCCTCACATCTaGCTGGTTGATAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSVVPHI*LVDNKA
Trigger: GGCCTTGTTATCAACCAGGCAGATGTGAGGAACAAC...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPADVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGAACTTTATTCCCAAAATaGAGACTTGATAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GIASPNRHCRYTRAVCPRTLFPK*RLDSLL
Trigger: CAGCAAGCTATCAAGTCTGCATTTTGGGAATAAAGT...TCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGAGAGCCACTCGTGCTaGCGGATCTCCATCCTGACA +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEESHSC*RISILT
Trigger: TGTCAGGATGGAGATCCGGCAGCACGAGTGGCTCTC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGAGGGCAAAAGAGTTTTaGAGAATTCGATACAAATGC +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLRAKEF*RIRYKC
Trigger: GCATTTGTATCGAATTCTCCAAAACTCTTTTGCCCT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTTGTACACATACTGCTTaGCATCATCTATCACACTGT +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPACTHTA*HHLSHC
Trigger: ACAGTGTGATAGATGATGCCAAGCAGTATGTGTACA...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp TTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACTTGGCTGTAAGGTTTTaGCATACGGTGAATACCAGT +
Preference number: 4 (lower is better)
Translates to: FFHLSQGLPVQTGTADIHLAVRF*HTVNTS
Trigger: ACTGGTATTCACCGTATGCCAAAACCTTACAGCCAA...GTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGCTGGATATTAGCAGGTaGCTACATAATTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPLDISR*LHNFSE
Trigger: CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAG...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGACTTGATAGCTTGCTaGATATTAGCAGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: NRLEQFGCLVGCKVLAYGDLIAC*ILAGGY
Trigger: GTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTC...ACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAGCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GTCCATGACAGCGATGTACACATACTGCTTGGCATCATCTATCACACTGTAGATGAACAACATTGGAACTaGACATCCCGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VHDSDVHILLGIIYHTVDEQHWN*TSRPPA
Trigger: AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTC...ATCTACAGTGTGATAGATGATGCCAAGCAGTATGTGTACATCGCTGTCATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR CCA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGAATGTGATCACTCACTaGATAACCAACATAGCCATT +
Preference number: 4 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLNVITH*ITNIAI
Trigger: AATGGCTATGTTGGTTATCCAGTGAGTGATCACATT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGTCGGGTACTGAACCTTaGTACAATCAGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKSGTEP*YNQLWP
Trigger: TGGCCACAGCTGATTGTACCAAGGTTCAGTACCCGA...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAACCTGCTGTGGGCTCTaGAGAGGCCATGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRTCCGL*RGHASP
Trigger: GGGAGAGGCATGGCCTCTTCAGAGCCCACAGCAGGT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCAATCCTGTGTGGGTCTTaGGAAAGGAACCATATAAAG +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPILCGS*ERNHIK
Trigger: CTTTATATGGTTCCTTTCTCAAGACCCACACAGGAT...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTCTGTCGCTGATGTGCTaGTTCCCACAGCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPLSLMC*FPQPLE
Trigger: CTCCAGAGGCTGTGGGAAGCAGCACATCAGCGACAG...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000427495.5
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTGAGCTGTCGCTGATGTaGTGCTTCCCACAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPELSLM*CFPQPL
Trigger: CAGAGGCTGTGGGAAGCAGCACATCAGCGACAGCTC...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000427495.5
CDS-3UTR GCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTTTGATTTCAATATTTTaGGAAGTCAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPALISIF*EVSWSN
Trigger: GTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAA...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp TTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCATTGATTTCAATATTTTaGGAAGTCAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LPVQTGTADIHVLFVHDPLISIF*EVSWSN
Trigger: GTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAA...TGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp CAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGAATTTCCAATATAAGCTaGTCCATCTGTCACCATGTA +
Preference number: 4 (lower is better)
Translates to: QTGTADIHVLFVHDPEGGISNIS*SICHHV
Trigger: TACATGGTGACAGATGGAGCAGCTTATATTGGAAAT...TCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp TGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGACTCACCGATACAAATaGTTGAGATTTGGTTTCATT +
Preference number: 4 (lower is better)
Translates to: CQSKPALPIYTCCLSTIQTHRYK*LRFGFI
Trigger: AATGAAACCAAATCTCAAGCATTTGTATCGGTGAGT...CTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR CCA 90 bp GGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATAGGGCAAAAGAGTTTTaGAGAATTCGATACAAATGC +
Preference number: 4 (lower is better)
Translates to: GLPVQTGTADIHVLFVHDRAKEF*RIRYKC
Trigger: GCATTTGTATCGAATTCTCCAAAACTCTTTTGCCCT...ATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTAGGGCAAAAGAGTTTTaGAGAATTCGATACAAATGC +
Preference number: 4 (lower is better)
Translates to: FESQSREQHWNWTSRPPARAKEF*RIRYKC
Trigger: GCATTTGTATCGAATTCTCCAAAACTCTTTTGCCCT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAACATGGCAGAAAACATaGTTTTGCTCCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKTWQKT*FCSCRS
Trigger: GCTCCTGCAGGAGCAAAACCATGTTTTCTGCCATGT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp CTTGAGCAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTaGGCATACGGTGAATACCAGTCCCTTTCAAACACA +
Preference number: 4 (lower is better)
Translates to: LEQFGCLVGCKV*AYGEYQSLSNT
Trigger: TGTGTTTGAAAGGGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
3UTR CAA 72 bp TTCTCTCAAATGAGAAAGACAGGCTGCGAACTGGGGTaGATGTCAGGGCTATTCAAAAGCCTCCGTCCATTT +
Preference number: 4 (lower is better)
Translates to: FSQMRKTGCELG*MSGLFKSLRPF
Trigger: AAATGGACGGAGGCTTTTGAATAGCCCTGACATCAACCCCAGTTCGCAGCCTGTCTTTCTCATTTGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCAAATATTTCCTACCGTaGCAACATCCTTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSKYFLP*QHPCEV
Trigger: TACCTCGCAAGGATGTTGTCACGGTAGGAAATATTT...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR TCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCAGTTCTATTGAAATGTTaGCAATCCAGATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPVLLKC*QSRSPP
Trigger: TGGTGGAGATCTGGATTGTCAACATTTCAATAGAAC...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCGGAGGCCCACAGTATTaGTCTTTGATGGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGGGPQY*SLMVCA
Trigger: TGCACACACCATCAAAGATCAATACTGTGGGCCTCC...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCACTAAGAGCAGAATGGTaGATCAACAAGACCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPLRAEW*INKTSN
Trigger: ATTTGAGGTCTTGTTGATTCACCATTCTGCTCTTAG...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CTTTTCATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LFIVIDSIESFGPGLRHSSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...AGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTATCTGTCCCAGGGATTaGCAGTCCAAACCGGCACTG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPICPRD*QSKPAL
Trigger: CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp GTCCATGACAGCGATGTACACATACTGCTTGGCATCATCTATCACACTGTAGATGTTGTTCCTCACATCTaGCTGGTTGATAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: VHDSDVHILLGIIYHTVDVVPHI*LVDNKA
Trigger: GGCCTTGTTATCAACCAGGCAGATGTGAGGAACAAC...ATCTACAGTGTGATAGATGATGCCAAGCAGTATGTGTACATCGCTGTCATGGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR GCA 90 bp ACAACTCACCGATACAAATGCTTGAGATTTGGTTTCATTCAACTGAAGTTGCAAGAGAGCCACTCGTGCTaGCGGATCTCCATCCTGACA +
Preference number: 4 (lower is better)
Translates to: TTHRYKCLRFGFIQLKLQESHSC*RISILT
Trigger: TGTCAGGATGGAGATCCGGCAGCACGAGTGGCTCTC...TTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGGTGAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTCTTTTGAGCCTCATCTaGTCGAAGCCCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPLLSLI*SKPSWG
Trigger: CCCCCATGAGGGCTTCGAGCAGATGAGGCTCAAAAG...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACATTAGAGGCAGGATCTTaGTATGCTACCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTLEAGS*YATQAG
Trigger: ACCAGCCTGGGTAGCATAGCAAGATCCTGCCTCTAA...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGGGCTGTCAACTTCTATaGCCAAATGGGAAGGGAATT +
Preference number: 4 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKGCQLL*PNGKGI
Trigger: AATTCCCTTCCCATTTGGGCATAGAAGTTGACAGCC...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGACTGCAGAAGTAACTaGTGTCACTGTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKDCRSN*CHCSQS
Trigger: ACTCTGAGAACAGTGACAGCAGTTACTTCTGCAGTC...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCACTATCACACTGTAGATaGCATCTATGTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: SSSCYTFRGSFPPVSSVALSHCR*HLCQNF
Trigger: GAAGTTTTGACATAGATGCCATCTACAGTGTGATAG...TGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp TTTCCGCCTGTGTCGTCTGTGGCAGTTTTGTTGGAGAGGGGTTTGAGTTTGAACCTTTCAAACTGCAGTTaGCTATTTCAGTGCAAATCG +
Preference number: 4 (lower is better)
Translates to: FPPVSSVAVLLERGLSLNLSNCS*LFQCKS
Trigger: CGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAG...GTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp CTACCCAATCAAAATTTCCAATATAAGCTGCTCCATCTGTCACCATGTACTTGTCGCCTGTGTCGTCTGTaGCAGTTTTGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LPNQNFQYKLLHLSPCTCRLCRL*QFCWRG
Trigger: CCCTCTCCAACAAAACTGCCACAGACGACACAGGCG...ACAAGTACATGGTGACAGATGGAGCAGCTTATATTGGAAATTTTGATTGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTCGCCTGTGTCGTCTGTaGCAGTTTTGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPRLCRL*QFCWRG
Trigger: CCCTCTCCAACAAAACTGCCACAGACGACACAGGCG...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGAACAACATTGGAACTaGACATCCCGGCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEEQHWN*TSRPPA
Trigger: AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCCCAGTGACAATGCAGTaGAGGCCCACAGTATTGATC +
Preference number: 4 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGPVTMQ*RPTVLI
Trigger: GATCAATACTGTGGGCCTCCACTGCATTGTCACTGG...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp CAACTTCTATGCCCAAATGGGAAGGGAATTTACACGTaGGGTGAGCTGGTTGAGATGGCTGTTAAAGTATGC +
Preference number: 4 (lower is better)
Translates to: QLLCPNGKGIYT*GELVEMAVKVC
Trigger: GCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGGGCATAGAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTCTTTTGGACCAGGTTTaGGGCACTCTGCTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: HCHRLHRVFWTRFEALCFLLDQV*GTLLLN
Trigger: ATTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAG...AAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp GTCCATGACAGCGATGTACACATACTGCTTGGCATCATCTATCACACTGTAGATGGTTTTGGCATACGGTaGATACCAGTCCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VHDSDVHILLGIIYHTVDGFGIR*IPVPFK
Trigger: TTTGAAAGGGACTGGTATTCACCGTATGCCAAAACC...ATCTACAGTGTGATAGATGATGCCAAGCAGTATGTGTACATCGCTGTCATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGAGTTTGAACAGGCTTaGGCAGTTCGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEEFEQA*AVRLFG
Trigger: ACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAAAATATTTCCTACCGTaGCAACATCCTTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKKYFLP*QHPCEV
Trigger: TACCTCGCAAGGATGTTGTCACGGTAGGAAATATTT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp ATTTCTTTTCATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCATGTAGTCCTGCTGCTTaGCGCTGCTGTAGAAGTTCG +
Preference number: 4 (lower is better)
Translates to: ISFHCHRLHRVFWTRFEACSPAA*RCCRSS
Trigger: CGAACTTCTACAGCAGCGTCAAGCAGCAGGACTACA...TGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACAGGGAATTCTCTCAAATaGGAAAGACAGGCTGCGAAC +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTGNSLK*ERQAAN
Trigger: GTTCGCAGCCTGTCTTTCTCATTTGAGAGAATTCCC...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp GCAGCTGCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGTTGATTTCAATATTTTaGGAAGTCAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: AAAVVEDDTEFFHLSQGLLISIF*EVSWSN
Trigger: GTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAA...CAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGCAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR GCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGCTGCCGATATACACGTaGTGTTTGTCCACGATCCAG +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSELPIYT*CLSTIQ
Trigger: CTGGATCGTGGACAAACAGCACGTGTATATCGGCAG...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACAGTTGTTCCTCACATCTaGCTGGTTGATAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTVVPHI*LVDNKA
Trigger: GGCCTTGTTATCAACCAGGCAGATGTGAGGAACAAC...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAGAGAGCCACTCGTGCTaGCGGATCTCCATCCTGACA +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRESHSC*RISILT
Trigger: TGTCAGGATGGAGATCCGGCAGCACGAGTGGCTCTC...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp AACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTAGGGCAAAAGAGTTTTaGAGAATTCGATACAAATGC +
Preference number: 4 (lower is better)
Translates to: NRLEQFGCLVGCKVLAYGRAKEF*RIRYKC
Trigger: GCATTTGTATCGAATTCTCCAAAACTCTTTTGCCCT...ACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTGCTCAAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp GCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCTATCACACTGTAGATaGCATCTATGTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: AVVEDDTEFFHLSQGLPVLSHCR*HLCQNF
Trigger: GAAGTTTTGACATAGATGCCATCTACAGTGTGATAG...GACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp ATTTCTTTTCATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCAAGTCGGGAACAACATTaGAACTGGACATCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ISFHCHRLHRVFWTRFEASREQH*NWTSRP
Trigger: TGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACT...TGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR CCA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCACTTTATTGGGATAACTaGCAGAGTTATAACTCCCAA +
Preference number: 4 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPLYWDN*QSYNSQ
Trigger: TTGGGAGTTATAACTCTGCCAGTTATCCCAATAAAG...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACACCACTTCCTCTCCAATaGTTGGACAAGCAGAGATTC +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTPLPLQ*LDKQRF
Trigger: GAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGG...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTaGAGATGGCTGTTAAAGTATGCTCTACAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: QMGREFTRWVSW*RWLLKYALQLN
Trigger: ATTGAGCTGTAGAGCATACTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CTTCTCTTATTTTTGCATCCAAGTCTGGCCAGTAAGTCCTTTTGGTGCTTGTGCTGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LLLFLHPSLASKSFWCLCCSCRR*HRVLSS
Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...GCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAAATAAGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR TCA 90 bp GTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTTGAATGCAGTTGTAGAAGATaGCACCGAGTTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: VIDSIESFGPGLRHSAFECSCRR*HRVLSS
Trigger: AGATGAAAGAACTCGGTGTCATCTTCTACAACTGCA...TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR TCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACATGCCAGCATTCTGAGTaGAATCATTCCCTACCCAAT +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTCQHSE*NHSLPN
Trigger: ATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCA...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTAAGCTTCCTAACAACTaGCCGGGTAGGTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPKLPNN*PGRSAE
Trigger: TTCTGCTGACCTACCCGGTCAGTTGTTAGGAAGCTT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATTACTGATGAGAGACTaGTTTGTTTCTGAGATCAGC +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKLLMRD*FVSEIS
Trigger: GCTGATCTCAGAAACAAATCAGTCTCTCATCAGTAA...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CTACCCAATCAAAATTTCCAATATAAGCTGCTCCATCTGTCACCATGTACTTGTCTTCTGCTGGGACATTaGGACCAATCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPNQNFQYKLLHLSPCTCLLLGH*DQSSFP
Trigger: AGGGAAGGAAGATTGGTCGCAATGTCCCAGCAGAAG...ACAAGTACATGGTGACAGATGGAGCAGCTTATATTGGAAATTTTGATTGGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTAGTCCAAACCGGCACTaGCGATATACACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPSPNRH*RYTRAV
Trigger: AACAGCACGTGTATATCGGCAGTGCCGGTTTGGACT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGATGGCTGTTAAAGTATaGTCTACAGCTCAATATGGG +
Preference number: 4 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKMAVKV*STAQYG
Trigger: CCCATATTGAGCTGTAGAGCATACTTTAACAGCCAT...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAACCCACCTTATTACATaGTGTGCATATCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKTHLIT*CAYPFR
Trigger: TCTGAAAGGATATGCACAGCATGTAATAAGGTGGGT...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATGTACACATACTGCTTaGCATCATCTATCACACTGT +
Preference number: 4 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKCTHTA*HHLSHC
Trigger: ACAGTGTGATAGATGATGCCAAGCAGTATGTGTACA...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGACGCCTGTGTCGTCTGTaGCAGTTTTGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRRLCRL*QFCWRG
Trigger: CCCTCTCCAACAAAACTGCCACAGACGACACAGGCG...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCCTGGATATTAGCAGGTaGCTACATAATTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSLDISR*LHNFSE
Trigger: CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAG...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTAGTGTCCCATGGCTGTaGATGAATACTTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPSVPWL*MNTSGD
Trigger: GTCCCCTGAAGTATTCATCCACAGCCATGGGACACT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGACACGTTGGGTGAGCTaGTTGAGATGGCTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSETRWVS*LRWLLK
Trigger: CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp GAGCAGAATGGTGAATCAACAAGACCTCAAATTGTCTaGACTGCAGAAGTAACTGCTGTCACTGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EQNGESTRPQIV*TAEVTAVTVLR
Trigger: TCTGAGAACAGTGACAGCAGTTACTTCTGCAGTCAAGACAATTTGAGGTCTTGTTGATTCACCATTCTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGACCCGTGCCAGCATTCTaGGTGAAATCATTCCCTACC +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRPVPAF*VKSFPT
Trigger: GGTAGGGAATGATTTCACTCAGAATGCTGGCACGGG...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp AATCATCACCAAAGCCACGTTTACTTTATTGGGATAACTGGCAGAGTTATAACTGAGTTTGAACAGGCTTaGGCAGTTCGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: NHHQSHVYFIGITGRVITEFEQA*AVRLFG
Trigger: ACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTC...AGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGACTTCTACGCCAGAATaGCATTCTCTGTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSETSTPE*HSLSEV
Trigger: TACCTCTGACAGAGAATGTCATTCTGGCGTAGAAGT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGCTATTCATGCTTAGCTaGCTGTGTAGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSELFMLS*LCRSWR
Trigger: TCTCCAAGACCTACACAGTCAGCTAAGCATGAATAG...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTGGGAGGACCTGGTGTTaGTTCCATCAAGATATGACA +
Preference number: 4 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSGRTWC*FHQDMT
Trigger: TGTCATATCTTGATGGAATCAACACCAGGTCCTCCC...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGCATCGGAAGGTCATTTaGATTCCACAGGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEHRKVI*IPQERE
Trigger: TTCTCTCTCCTGTGGAATTCAAATGACCTTCCGATG...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGGATAGACCCTGGATCTaGTCTTATCAAGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKDRPWI*SYQEIL
Trigger: AAGAATTTCTTGATAAGATCAGATCCAGGGTCTATC...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTGTTGTTCCTCACATCTaGCTGGTTGATAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPVVPHI*LVDNKA
Trigger: GGCCTTGTTATCAACCAGGCAGATGTGAGGAACAAC...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGACTTTATTCCCAAAATaGAGACTTGATAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKTLFPK*RLDSLL
Trigger: CAGCAAGCTATCAAGTCTGCATTTTGGGAATAAAGT...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACACTGGTGATAGCATTTTaGCAGGCCTCAAAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTLVIAF*QASKGN
Trigger: ATTTCCTTTTGAGGCCTGGCAAAATGCTATCACCAG...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp ATTTCTTTTCATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCCATAGAGTCTTTTaGACCAGGTTTGAGGCACTC +
Preference number: 4 (lower is better)
Translates to: ISFHCHRLHRVFWTRFEALHRVF*TRFEAL
Trigger: GAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAG...TGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATGGGGGTCACTTTTCTaGCTGCCACAGAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRWGSLF*LPQKDS
Trigger: ACTGTCCTTCTGTGGCAGCCAGAAAAGTGACCCCCA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACAGCATTCTTTCCCTCCTaGAAAGTAATTCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTAFFPS*KVIPGI
Trigger: TATCCCAGGAATTACTTTCCAGGAGGGAAAGAATGC...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTAGGGAATTTACACGTTaGGTGAGCTGGTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSREFTR*VSWLRW
Trigger: CCATCTCAACCAGCTCACCCAACGTGTAAATTCCCT...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTGCCAGCATTCTGAGTaGAATCATTCCCTACCCAAT +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPCQHSE*NHSLPN
Trigger: ATTGGGTAGGGAATGATTTCACTCAGAATGCTGGCA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTGGTTTTGGCATACGGTaGATACCAGTCCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPGFGIR*IPVPFK
Trigger: TTTGAAAGGGACTGGTATTCACCGTATGCCAAAACC...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAGAGTTTGAACAGGCTTaGGCAGTTCGGCTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLREFEQA*AVRLFG
Trigger: ACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTC...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTCTATTCATGCTTAGCTaGCTGTGTAGGTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPLFMLS*LCRSWR
Trigger: TCTCCAAGACCTACACAGTCAGCTAAGCATGAATAG...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR TCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCAGACTGATTTGTTTCTaGGATCAGCTTGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGRLICF*DQLEEK
Trigger: TTTCTCCTCAAGCTGATCTCAGAAACAAATCAGTCT...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATTCCTCACATCTGCCTaGTTGATAACAAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRFLTSA*LITRPV
Trigger: CACGGGCCTTGTTATCAACCAGGCAGATGTGAGGAA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAAAACAGTGGGCCCATTaGACCAGTCGCATCTACCTT +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRKQWAH*TSRIYL
Trigger: AAGGTAGATGCGACTGGTCCAATGGGCCCACTGTTT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGCGTCTAGTTTTGTGTTaGTGTTATTCATGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSERLVLC*CYSCQS
Trigger: GCTTTGGCATGAATAACATCAACACAAAACTAGACG...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACAGCTAAAGCATCCAAATaGAAGAAAGTTCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTAKASK*KKVLQN
Trigger: ATTCTGCAGAACTTTCTTTCATTTGGATGCTTTAGC...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp AATCATCACCAAAGCCACGTTTACTTTATTGGGATAACTGGCAGAGTTATAACTGATCAACCAAAAATGTaGTCAGACCCCTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: NHHQSHVYFIGITGRVITDQPKM*SDPSHQ
Trigger: TTGGTGAGAGGGGTCTGATCACATTTTTGGTTGATC...AGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACATCTTCACCCTTACTATaGTTTAATTGGACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTSSPLL*FNWTPC
Trigger: ACAAGGAGTCCAATTAAATCATAGTAAGGGTGAAGA...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACATTGATTTCAATATTTTaGGAAGTCAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTLISIF*EVSWSN
Trigger: GTTGCTCCAGCTGACTTCGCAAAATATTGAAATCAA...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCATTTCCAATATAAGCTaGTCCATCTGTCACCATGTA +
Preference number: 4 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGISNIS*SICHHV
Trigger: TACATGGTGACAGATGGAGCAGCTTATATTGGAAAT...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEDVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACACTATCACACTGTAGATaGCATCTATGTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTLSHCR*HLCQNF
Trigger: GAAGTTTTGACATAGATGCCATCTACAGTGTGATAG...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTTGGCTGTAAGGTTTTaGCATACGGTGAATACCAGT +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPLAVRF*HTVNTS
Trigger: ACTGGTATTCACCGTATGCCAAAACCTTACAGCCAA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTCTGTCACTGCTCAAATaGAAGTTTTCAACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSLSLLK*KFSTGR
Trigger: CCTACCAGTTGAAAACTTCCATTTGAGCAGTGACAG...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AATCATCACCAAAGCCACGTTTACTTTATTGGGATAACTGGCAGAGTTATAACTAGTATAGCCACAGGCTaGTGGGAAATGAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: NHHQSHVYFIGITGRVITSIATG*WEMSFY
Trigger: ATAGAAGCTCATTTCCCACCAGCCTGTGGCTATACT...AGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR TCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAACTTCTACGCCAGAATaGCATTCTCTGTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRTSTPE*HSLSEV
Trigger: TACCTCTGACAGAGAATGTCATTCTGGCGTAGAAGT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTGCTTCTCTTATTTTTaGATCCAAGTCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPCFSYF*IQVWPV
Trigger: TACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTTCAGAATGTCTCATCTaGTTTTCAGAATTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSSECLI*FSEFSA
Trigger: GGCGGAAAATTCTGAAAAGCAGATGAGACATTCTGA...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTGTACACATACTGCTTaGCATCATCTATCACACTGT +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPCTHTA*HHLSHC
Trigger: ACAGTGTGATAGATGATGCCAAGCAGTATGTGTACA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTCTTTCAAACTGCAGTTaGCTATTTCAGTGCAAATCG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPLSNCS*LFQCKS
Trigger: CGATTTGCACTGAAATAGCCAACTGCAGTTTGAAAG...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAGACTTGATAGCTTGCTaGATATTAGCAGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRDLIAC*ILAGGY
Trigger: GTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTC...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTTTCCTCTCCAATGGTTaGACAAGCAGAGATTCAATT +
Preference number: 4 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSFLSNG*TSRDSI
Trigger: AATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAA...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTAGCACACCAGTTCATTaGGAACAAGTACAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPSTPVH*EQVQKD
Trigger: ATCTTTCTGTACTTGTTCCCAATGAACTGGTGTGCT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR GCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTACTTTATTCCCAAAATaGAGACTTGATAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPTLFPK*RLDSLL
Trigger: CAGCAAGCTATCAAGTCTGCATTTTGGGAATAAAGT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTCTATCACACTGTAGATaGCATCTATGTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPLSHCR*HLCQNF
Trigger: GAAGTTTTGACATAGATGCCATCTACAGTGTGATAG...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATTTTGCATCCAAGTCTaGCCAGTAAGTCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRFCIQV*PVSPFG
Trigger: ACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTCTAGAAACGTTTGCTaGCATACTCTTAACAGCATA +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPSRNVC*HTLNSI
Trigger: TATGCTGTTAAGAGTATGCCAGCAAACGTTTCTAGA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAGTGAGCTGGTTGAGATaGCTGTTAAAGTATGCTCTA +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRVSWLR*LLKYAL
Trigger: TAGAGCATACTTTAACAGCCATCTCAACCAGCTCAC...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AATCATCACCAAAGCCACGTTTACTTTATTGGGATAACTGGCAGAGTTATAACTACTTCTATGCCCAAATaGGAAGGGAATTTACACGTT +
Preference number: 4 (lower is better)
Translates to: NHHQSHVYFIGITGRVITTSMPK*EGNLHV
Trigger: AACGTGTAAATTCCCTTCCCATTTGGGCATAGAAGT...AGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CCA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTAAATTTTATCCTGTGTaGGTCTTGAGAAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPKFYPV*VLRKEP
Trigger: TGGTTCCTTTCTCAAGACCCACACAGGATAAAATTT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
3UTR CAA 72 bp GAGGAGAAAGGGAAAACAACTCACCGATACAAATGCTaGAGATTTGGTTTCATTCAACTGAAGTTGCAATTT +
Preference number: 4 (lower is better)
Translates to: EEKGKTTHRYKC*RFGFIQLKLQF
Trigger: AAATTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGGTGAGTTGTTTTCCCTTTCTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR TCA 90 bp ACAACTCACCGATACAAATGCTTGAGATTTGGTTTCATTCAACTGAAGTTGCAAACCGATACAAATGCTTaGGATTTGGTTTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: TTHRYKCLRFGFIQLKLQTDTNA*DLVSFN
Trigger: GTTGAATGAAACCAAATCTCAAGCATTTGTATCGGT...TTGCAACTTCAGTTGAATGAAACCAAATCTCAAGCATTTGTATCGGTGAGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR GCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATGCTTCTCTTATTTTTaGATCCAAGTCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRCFSYF*IQVWPV
Trigger: TACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR GCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAGATGTAAGCTATTCATaGTTAGCTGACTGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRDVSYS*LADCVG
Trigger: ACCTACACAGTCAGCTAAGCATGAATAGCTTACATC...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CCA 90 bp ATCATCTATCACACTGTAGATGGCATCTATGTCAAAACTTCTGTTTTTAGGGCACTGGATATTAGCAGGTaGCTACATAATTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: IIYHTVDGIYVKTSVFRALDISR*LHNFSE
Trigger: CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAG...TGCCCTAAAAACAGAAGTTTTGACATAGATGCCATCTACAGTGTGATAGATGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CCA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGACTATCACACTGTAGATaGCATCTATGTCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRLSHCR*HLCQNF
Trigger: GAAGTTTTGACATAGATGCCATCTACAGTGTGATAG...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
3UTR CAA 72 bp AAATGTGAAAAACTACTTTATTCCCAAAATGCAGACTaGATAGCTTGCTGGATATTAGCAGGTGGCTACATA +
Preference number: 4 (lower is better)
Translates to: KCEKLLYSQNAD*IACWILAGGYI
Trigger: TATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGAATAAAGTAGTTTTTCACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS GCA 90 bp GGGGAGACAGAAGTGCCCGGTGCGGCGGCGACGTCGCCCGGCGGCTaGGGTCCCGAGCGGGCGCTCCGCTCGCCGGCTCCTTGCGGCACC +
Preference number: 5 (lower is better)
Translates to: GETEVPGAAATSPGG*GPERALRSPAPCGT
Trigger: GGTGCCGCAAGGAGCCGGCGAGCGGAGCGCCCGCTCGGGACCGCAGCCGCCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS CCA 90 bp GCGCGGAGGGCGAGCGGGAGGCCCAGCGGGAGCCGGAGGTGGAGCTaGAGACTGAGCTGGAGGAGCTGGAGGAGCGAGCGGGCGCGGGGA +
Preference number: 5 (lower is better)
Translates to: ARRASGRPSGSRRWS*RLSWRSWRSERARG
Trigger: TCCCCGCGCCCGCTCGCTCCTCCAGCTCCTCCAGCTCAGTCTCCAGCTCCACCTCCGGCTCCCGCTGGGCCTCCCGCTCGCCCTCCGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467561.5
ENST00000536534.7
CDS CCA 90 bp AGCCGGGCGCGGAGGGCGAGCGGGAGGCCCAGCGGGAGCCGGAGGTaGAGCTGGAGACTGAGCTGGAGGAGCTGGAGGAGCGAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: SRARRASGRPSGSRR*SWRLSWRSWRSERA
Trigger: CGCCCGCTCGCTCCTCCAGCTCCTCCAGCTCAGTCTCCAGCTCCACCTCCGGCTCCCGCTGGGCCTCCCGCTCGCCCTCCGCGCCCGGCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467561.5
ENST00000536534.7
CDS TCA 90 bp GGGGAGGCCGAGAGCCACTCGTGCTGCCGGATCTCCATCCTGACATaGCCGGGCGGCCGCCGGCGAGCAGCGGACTCGGGACGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: GEAESHSCCRISILT*PGGRRRAADSGRAR
Trigger: GCGCGCCCGTCCCGAGTCCGCTGCTCGCCGGCGGCCGCCCGGTCATGTCAGGATGGAGATCCGGCAGCACGAGTGGCTCTCGGCCTCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000467561.5
ENST00000536534.7
CDS GCA 90 bp GAGACTGAGCTGGAGGAGCTGCTCCGGGGAGACAGAAGTGCCCGGTaGGGCGGCGACGTCGCCCGGCGGCTGCGGTCCCGAGCGGGCGCT +
Preference number: 5 (lower is better)
Translates to: ETELEELLRGDRSAR*GGDVARRLRSRAGA
Trigger: AGCGCCCGCTCGGGACCGCAGCCGCCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCCGGAGCAGCTCCTCCAGCTCAGTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000442594.6
CDS CCA 90 bp CCCAGCGGGAGCCGGAGGTGGAGCTGGAGACTGAGCTGGAGGAGCTaGAGGAGCGAGCGGGCGCGGGGAGCGCGGGGTGCTGAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: PSGSRRWSWRLSWRS*RSERARGARGAERQ
Trigger: CTGGCGCTCAGCACCCCGCGCTCCCCGCGCCCGCTCGCTCCTCCAGCTCCTCCAGCTCAGTCTCCAGCTCCACCTCCGGCTCCCGCTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467561.5
ENST00000536534.7
CDS TCA 90 bp TGTCTTTCCTCCGAAGCCAGACGCTGGCGCTGTAGTCCTGCTGCTTaGCGCTGCTGTAGAAGTTCGCGCCCACTCGGGTCAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: CLSSEARRWRCSPAA*RCCRSSRPLGSGLG
Trigger: CCCCAAGCCTGACCCGAGTGGGCGCGAACTTCTACAGCAGCGTCAAGCAGCAGGACTACAGCGCCAGCGTCTGGCTTCGGAGGAAAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000467561.5
ENST00000536534.7
CDS CCA 90 bp CTGCTTGACGCTGCTGTAGAAGTTCGCGCCCACTCGGGTCAGGCTTaGGGAGGGCTCCTTGGGGCGGCTTTTGAGCCTCATCTGCTCGAA +
Preference number: 5 (lower is better)
Translates to: LLDAAVEVRAHSGQA*GGLLGAAFEPHLLE
Trigger: TTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGGAGCCCTCCCCAAGCCTGACCCGAGTGGGCGCGAACTTCTACAGCAGCGTCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000467561.5
ENST00000536534.7
CDS-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTCCTTGGGGCGGCTTTaGAGCCTCATCTGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNSLGRL*SLICSK
Trigger: CTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGGA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACCCCCTGATTAGGGGCTaGCTGTGTCTGGTAGGCATC +
Preference number: 5 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNPLIRG*LCLVGI
Trigger: GATGCCTACCAGACACAGCAAGCCCCTAATCAGGGG...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS GCA 90 bp GATGCACTTCTGCTGGGACATTGCGACCAATCTTCCTTCCCTCCCTaGGGAGTCCAGCAGCCAGGAGCTGTCGCTGATGTGCTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: DALLLGHCDQSSFPP*GVQQPGAVADVLLP
Trigger: GGGAAGCAGCACATCAGCGACAGCTCCTGGCTGCTGGACTCCGCAGGGAGGGAAGGAAGATTGGTCGCAATGTCCCAGCAGAAGTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000459864.1
CDS-3UTR CAA 90 bp GTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTCATCTGTCCCAGGGATaGCCAGTCCAAACCGGCACT +
Preference number: 5 (lower is better)
Translates to: VHDPEGGLQPALVVSGHVHLSQG*PVQTGT
Trigger: AGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATG...AACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp CCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCCATCTGTCCCAGGGATaGCCAGTCCAAACCGGCACT +
Preference number: 5 (lower is better)
Translates to: PRDCQSKPALPIYTCCLSHLSQG*PVQTGT
Trigger: AGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATG...GGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp ACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTCATCTGTCCCAGGGATaGCCAGTCCAAACCGGCACT +
Preference number: 5 (lower is better)
Translates to: TRAVCPRSRRRTAAGPCCHLSQG*PVQTGT
Trigger: AGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATG...ACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAGAGTCGGGAACAACATaGGAACTGGACATCCCGGCC +
Preference number: 5 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGESGTT*ELDIPA
Trigger: GGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTC...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTGGGAGTGCTCCAGCTaGTCTTTCCTCCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRWECSS*SFLRSQ
Trigger: CTGGCTTCGGAGGAAAGACAAGCTGGAGCACTCCCA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCATCTGTCCCAGGGATaGCCAGTCCAAACCGGCACT +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLHLSQG*PVQTGT
Trigger: AGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTCATGTTGGGAGTGCTCCAGCTaGTCTTTCCTCCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: RSRRRTAAGPCCKRSCSCWECSS*SFLRSQ
Trigger: CTGGCTTCGGAGGAAAGACAAGCTGGAGCACTCCCA...ACATGAACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCATCTGTCCCAGGGATaGCCAGTCCAAACCGGCACT +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPAHLSQG*PVQTGT
Trigger: AGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp ATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTCTCACATCTGCCTGGTaGATAACAAGGCCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: ICPRDCQSKPALPIYTCCLTSAW*ITRPVP
Trigger: TGGCACGGGCCTTGTTATCAACCAGGCAGATGTGAG...ACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCACATCTGCCTGGTaGATAACAAGGCCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLTSAW*ITRPVP
Trigger: TGGCACGGGCCTTGTTATCAACCAGGCAGATGTGAG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGATGGGAGTGCTCCAGCTaGTCTTTCCTCCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: QTGTADIHVLFVHDPEGGWECSS*SFLRSQ
Trigger: CTGGCTTCGGAGGAAAGACAAGCTGGAGCACTCCCA...TCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTTACCACAGTACAGCTaGGTTACTGATGAGAGACTG +
Preference number: 5 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNLPQYS*VTDERL
Trigger: CAGTCTCTCATCAGTAACCAAGCTGTACTGTGGTAA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTTTCAGCTTCTCACCTaGAGTCTGGAGCCTCAGACC +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRFQLLT*SLEPQT
Trigger: GGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATGCTTCTCTTATTTTaGCATCCAAGTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNMLLLF*HPSLAS
Trigger: ACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCAT...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACTCTGTCACCATGTACTaGTTGCGATTTAACCTAGGA +
Preference number: 5 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNSVTMY*LRFNLG
Trigger: TCCTAGGTTAAATCGCAACAAGTACATGGTGACAGA...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGAGCAGTTCGGCTGTTaGGTTGGCTGTAAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSREQFGC*VGCKVL
Trigger: CAAAACCTTACAGCCAACCAAACAGCCGAACTGCTC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGAGAGGGGTTTGAGTTaGAACAGGCTTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRERGLS*NRLEQF
Trigger: GAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRSSVAV*LERGLS
Trigger: ACTCAAACCCCTCTCCAACAAAACTGCCACAGACGA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGATATACACGTGCTGTTaGTCCACGATCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRIYTCC*STIQKE
Trigger: CTCCTTCTGGATCGTGGACAAACAGCACGTGTATAT...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCAGTTTTGTCTCACATCTGCCTGGTaGATAACAAGGCCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: HVIRSGDPFRLCRLWQFCLTSAW*ITRPVP
Trigger: TGGCACGGGCCTTGTTATCAACCAGGCAGATGTGAG...ACAAAACTGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGTTGGCTGTAAGGTTTaGGCATACGGTGAATACCAG +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRVGCKV*AYGEYQ
Trigger: CTGGTATTCACCGTATGCCAAAACCTTACAGCCAAC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCAGTTCGGCTGTTTGGTaGGCTGTAAGGTTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: PRDCQSKPALPIYTCCLSSSAVW*AVRFWH
Trigger: ATGCCAAAACCTTACAGCCAACCAAACAGCCGAACT...GGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp GTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTAAGCGGTCATGTTTTGTTGGAGAGGGGTTaGAGTTTGAACAGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: VHDPEGGLQPALVVSGHVLLERG*SLNRLE
Trigger: CTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAA...AACATGACCGCTTACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTTGTTGGAGAGGGGTTaGAGTTTGAACAGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRLLERG*SLNRLE
Trigger: CTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCATTTCTGACACTCTaGGTATGGGGGTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRPFLTL*VWGSLF
Trigger: GAAAAGTGACCCCCATACCAAGAGTGTCAGAAATGG...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGACGTTGGGTGAGCTGGTaGAGATGGCTGTTAAAGTAT +
Preference number: 5 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGRWVSW*RWLLKY
Trigger: ATACTTTAACAGCCATCTCAACCAGCTCACCCAACG...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAAGAAACCATCTGTGTTaGTCTTGCAAGGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGRNHLC*SCKGLR
Trigger: TCTGAGCCCCTTGCAAGACAAACACAGATGGTTTCT...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATAACTTCTGCTGGGACATaGCGACCAATCTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: EFFHLSQGLPVQTGTADITSAGT*RPIFLP
Trigger: GGGAAGGAAGATTGGTCGCAATGTCCCAGCAGAAGT...TATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR CAA 90 bp GCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAATATACACGTGCTGTTaGTCCACGATCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: ASPNRHCRYTRAVCPRSRIYTCC*STIQKE
Trigger: CTCCTTCTGGATCGTGGACAAACAGCACGTGTATAT...TCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGTCTTTTGGACCAGGTTaGAGGCACTCTGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRSFGPG*RHSAFE
Trigger: TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGA...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCCCGAGGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACAAAGGTGTGATTCTTTaGTTCTTTTGTAGCACAAGC +
Preference number: 5 (lower is better)
Translates to: ARGQAVRGSALSHRVGNNKGVIL*FFCSTS
Trigger: GCTTGTGCTACAAAAGAACAAAAGAATCACACCTTT...GTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCCTCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGGTTGGCTGTAAGGTTTaGGCATACGGTGAATACCAG +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLVGCKV*AYGEYQ
Trigger: CTGGTATTCACCGTATGCCAAAACCTTACAGCCAAC...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGAGTTCGGCTGTTTGGTaGGCTGTAAGGTTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLSSAVW*AVRFWH
Trigger: ATGCCAAAACCTTACAGCCAACCAAACAGCCGAACT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCGAGAGGGGTTTGAGTTaGAACAGGCTTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: DCQSKPALPIYTCCLSTIERGLS*NRLEQF
Trigger: GAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTC...GATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTGAGAGGGGTTTGAGTTaGAACAGGCTTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPAERGLS*NRLEQF
Trigger: GAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTC...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTTGTTGGAGAGGGGTTaGAGTTTGAACAGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLLLERG*SLNRLE
Trigger: CTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTCTGTGGCAGTTTTGTaGGAGAGGGGTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLSVAVL*ERGLSL
Trigger: CAAACTCAAACCCCTCTCCAACAAAACTGCCACAGA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTTCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPASSVAV*LERGLS
Trigger: ACTCAAACCCCTCTCCAACAAAACTGCCACAGACGA...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCAATCTGCTGCTGCTGCTaGGCAGAAAAGCCTGGGATG +
Preference number: 5 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPICCCC*AEKPGM
Trigger: CATCCCAGGCTTTTCTGCCAAGCAGCAGCAGCAGAT...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATATATACACGTGCTGTTaGTCCACGATCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GLPVQTGTADIHVLFVHDIYTCC*STIQKE
Trigger: CTCCTTCTGGATCGTGGACAAACAGCACGTGTATAT...ATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp GGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCTTTTGGACCAGGTTaGAGGCACTCTGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: GIASPNRHCRYTRAVCPRSFGPG*RHSAFE
Trigger: TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGA...TCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTCTTTTGGACCAGGTTaGAGGCACTCTGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLSFGPG*RHSAFE
Trigger: TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCATGCTTCTCTTATTTTaGCATCCAAGTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: DTEFFHLSQGLPVQTGTAMLLLF*HPSLAS
Trigger: ACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCAT...GGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp GGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGGTCACCATGTACTTGTaGCGATTTAACCTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: GLRFESQSREQHWNWTSRVTMYL*RFNLGK
Trigger: CTTTCCTAGGTTAAATCGCAACAAGTACATGGTGAC...CCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTGTTGGCTGTAAGGTTTaGGCATACGGTGAATACCAG +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPAVGCKV*AYGEYQ
Trigger: CTGGTATTCACCGTATGCCAAAACCTTACAGCCAAC...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTAGTTCGGCTGTTTGGTaGGCTGTAAGGTTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPASSAVW*AVRFWH
Trigger: ATGCCAAAACCTTACAGCCAACCAAACAGCCGAACT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCTATTTTTCAAGGGTGTaGAAGGCTGGCATGAGATGT +
Preference number: 5 (lower is better)
Translates to: DTEFFHLSQGLPVQTGTAYFSRV*KAGMRC
Trigger: ACATCTCATGCCAGCCTTCAACACCCTTGAAAAATA...GGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGGAGTCGGGAACAACATaGGAACTGGACATCCCGGCC +
Preference number: 5 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKESGTT*ELDIPA
Trigger: GGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTC...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTCACCTCGGCTCCTTaGAATCAGCTGTTACATCAC +
Preference number: 5 (lower is better)
Translates to: FFHLSQGLPVQTGTADIHVTSAP*NQLLHH
Trigger: GTGATGTAACAGCTGATTCAAAGGAGCCGAGGTGAC...GTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTAAGGGAATTTACACGTaGGGTGAGCTGGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPAKGIYT*GELVEM
Trigger: CATCTCAACCAGCTCACCCAACGTGTAAATTCCCTT...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CCCAGGGATTGCCAGTCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCCTTGATTTCAATATTTaGCGAAGTCAGCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: PRDCQSKPALPIYTCCLSLDFNI*RSQLEQ
Trigger: TTGCTCCAGCTGACTTCGCAAAATATTGAAATCAAG...GGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGACTGGCAATCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp TCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCAATATACACGTGCTGTTaGTCCACGATCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SSSCYTFRGSFPPVSSVAIYTCC*STIQKE
Trigger: CTCCTTCTGGATCGTGGACAAACAGCACGTGTATAT...TGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TCCAAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGTCTTTTGGACCAGGTTaGAGGCACTCTGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: SKPALPIYTCCLSTIQKESFGPG*RHSAFE
Trigger: TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGA...CTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp AAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTCTTTTGGACCAGGTTaGAGGCACTCTGCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: KPALPIYTCCLSTIQKEDSFGPG*RHSAFE
Trigger: TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGA...GTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp ACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATC +
Preference number: 5 (lower is better)
Translates to: TRAVCPRSRRRTAAGPCCTFKLQ*AISVQI
Trigger: GATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...ACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TTGGAGAGGGGTTTGAGTTTGAACAGGCTTGAGCAGTTCGGCTGTTTGGTTGGCGTTGGCTGTAAGGTTTaGGCATACGGTGAATACCAG +
Preference number: 5 (lower is better)
Translates to: LERGLSLNRLEQFGCLVGVGCKV*AYGEYQ
Trigger: CTGGTATTCACCGTATGCCAAAACCTTACAGCCAAC...GCCAACCAAACAGCCGAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCAGAGCAGTTCGGCTGTTaGGTTGGCTGTAAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPEQFGC*VGCKVL
Trigger: CAAAACCTTACAGCCAACCAAACAGCCGAACTGCTC...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGTATTTTTCAAGGGTGTaGAAGGCTGGCATGAGATGT +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLYFSRV*KAGMRC
Trigger: ACATCTCATGCCAGCCTTCAACACCCTTGAAAAATA...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTGCAGCCGGCCCTTGTTGTATCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 5 (lower is better)
Translates to: HVLFVHDPEGGLQPALVVSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...TACAACAAGGGCCGGCTGCAGTCCTCCTTCTGGATCGTGGACAAACAGCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACAGTGAGGGGCTCCGCTTaGAGTCACAGAGTCGGGAAC +
Preference number: 5 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTVRGSA*SHRVGN
Trigger: GTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCAC...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTTGAATCCTTGGGGCGGCTTTaGAGCCTCATCTGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: VIDSIESFGPGLRHSAFESLGRL*SLICSK
Trigger: CTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGGA...TTCAAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTCTGAGGAATACCCATaGAGTCACTGTATAAAGCAG +
Preference number: 5 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPSEEYP*SHCIKQ
Trigger: CTGCTTTATACAGTGACTCAATGGGTATTCCTCAGA...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAACATTTTCTAGGATGTaGCCTTTAATAACTCACCCC +
Preference number: 5 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGTFSRM*PLITHP
Trigger: GGGGTGAGTTATTAAAGGCAACATCCTAGAAAATGT...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATC +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLTFKLQ*AISVQI
Trigger: GATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTGTCACCATGTACTTGTaGCGATTTAACCTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPAVTMYL*RFNLGK
Trigger: CTTTCCTAGGTTAAATCGCAACAAGTACATGGTGAC...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTCTGTCACCATGTACTaGTTGCGATTTAACCTAGGA +
Preference number: 5 (lower is better)
Translates to: KPALPIYTCCLSTIQKEDSVTMY*LRFNLG
Trigger: TCCTAGGTTAAATCGCAACAAGTACATGGTGACAGA...GTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGAATACCAGTCCTTGTTGGAGAGGGGTTaGAGTTTGAACAGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: QFGCLVGCKVLAYGEYQSLLERG*SLNRLE
Trigger: CTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAA...GGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp GCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCTCTGTGGCAGTTTTGTaGGAGAGGGGTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: AVVEDDTEFFHLSQGLPVSVAVL*ERGLSL
Trigger: CAAACTCAAACCCCTCTCCAACAAAACTGCCACAGA...GACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCATGCAGACTTGATAGCTaGCTGGATATTAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPCRLDS*LDISRW
Trigger: CCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGTGAGGGGCTCCGCTTaGAGTCACAGAGTCGGGAAC +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEVRGSA*SHRVGN
Trigger: GTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCAC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACATGGGAGTGCTCCAGCTaGTCTTTCCTCCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTWECSS*SFLRSQ
Trigger: CTGGCTTCGGAGGAAAGACAAGCTGGAGCACTCCCA...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTGTTCTATTGAAATGTaGACAATCCAGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPCSIEM*TIQIST
Trigger: GGTGGAGATCTGGATTGTCAACATTTCAATAGAACA...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCATTTTCAGCATTCCTaGTTTCTATCAGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: ALSHRVGNNIGTGHPGHLHFQHS*FLSGSG
Trigger: ACCTGAACCTGATAGAAACAAGGAATGCTGAAAATG...CAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAGGCTGCGAACTGGGGTaGATGTCAGGGCTATTCAAA +
Preference number: 5 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKGCELG*MSGLFK
Trigger: TTTGAATAGCCCTGACATCAACCCCAGTTCGCAGCC...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CAAGTAGGTTTTCAGCTTCTCACCTTGAGTCTGGAGCCTCAGACCACTCGGCCGTATCCTGTGTGGGTCTaGAGAAAGGAACCATATAAA +
Preference number: 5 (lower is better)
Translates to: QVGFQLLTLSLEPQTTRPYPVWV*RKEPYK
Trigger: TTTATATGGTTCCTTTCTCAAGACCCACACAGGATA...CGGCCGAGTGGTCTGAGGCTCCAGACTCAAGGTGAGAAGCTGAAAACCTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GGCCAAGCAGTGAGGGGCTCCGCTTTGAGTCACAGAGTCGGGAACAACATTGGAATCAGTACCATAACTTaGCTGAAAATATGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: GQAVRGSALSHRVGNNIGISTIT*LKIWCC
Trigger: GCAACACCATATTTTCAGCAAAGTTATGGTACTGAT...TCCAATGTTGTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCACTGCTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCAGTTTTGTATGCTTCTCTTATTTTaGCATCCAAGTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: HVIRSGDPFRLCRLWQFCMLLLF*HPSLAS
Trigger: ACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCAT...ACAAAACTGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TCTTCATCATGTTATACGTTCCGGGGATCCTTTCCGCCTGTGTCGTCTGTGGCAGTCACCATGTACTTGTaGCGATTTAACCTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: SSSCYTFRGSFPPVSSVAVTMYL*RFNLGK
Trigger: CTTTCCTAGGTTAAATCGCAACAAGTACATGGTGAC...TGCCACAGACGACACAGGCGGAAAGGATCCCCGGAACGTATAACATGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCCTCACATCTGCCTGGTaGATAACAAGGCCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGLTSAW*ITRPVP
Trigger: TGGCACGGGCCTTGTTATCAACCAGGCAGATGTGAG...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGTCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKSSVAV*LERGLS
Trigger: ACTCAAACCCCTCTCCAACAAAACTGCCACAGACGA...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp AAACCGGCACTGCCGATATACACGTGCTGTTTGTCCACGATCCAGAAGGAGGACTCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 5 (lower is better)
Translates to: KPALPIYTCCLSTIQKEDSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...GTCCTCCTTCTGGATCGTGGACAAACAGCACGTGTATATCGGCAGTGCCGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGAGTCGGGAACAACATaGGAACTGGACATCCCGGCC +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEESGTT*ELDIPA
Trigger: GGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTGTGAGGGGCTCCGCTTaGAGTCACAGAGTCGGGAAC +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPVRGSA*SHRVGN
Trigger: GTTCCCGACTCTGTGACTCAAAGCGGAGCCCCTCAC...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314833.10
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAGGGGAGGACCTGGTGTaGATTCCATCAAGATATGAC +
Preference number: 5 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKGEDLV*IPSRYD
Trigger: GTCATATCTTGATGGAATCAACACCAGGTCCTCCCC...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GCAGTTGTAGAAGATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCATGTACACATACTGCTaGGCATCATCTATCACACTG +
Preference number: 5 (lower is better)
Translates to: AVVEDDTEFFHLSQGLPVMYTYC*ASSITL
Trigger: CAGTGTGATAGATGATGCCAAGCAGTATGTGTACAT...GACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCATCTTCTACAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CAGTTCGGCTGTTTGGTTGGCTGTAAGGTTTTGGCATACGGTGAATACCAGTCCATGTACACATACTGCTaGGCATCATCTATCACACTG +
Preference number: 5 (lower is better)
Translates to: QFGCLVGCKVLAYGEYQSMYTYC*ASSITL
Trigger: CAGTGTGATAGATGATGCCAAGCAGTATGTGTACAT...GGACTGGTATTCACCGTATGCCAAAACCTTACAGCCAACCAAACAGCCGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp ATGACACCGAGTTCTTTCATCTGTCCCAGGGATTGCCAGTCCAAACCGGCACTGAAAGGTGTGATTCTTTaGTTCTTTTGTAGCACAAGC +
Preference number: 5 (lower is better)
Translates to: MTPSSFICPRDCQSKPALKGVIL*FFCSTS
Trigger: GCTTGTGCTACAAAAGAACAAAAGAATCACACCTTT...CAGTGCCGGTTTGGACTGGCAATCCCTGGGACAGATGAAAGAACTCGGTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAATTGTTGGAGAGGGGTTaGAGTTTGAACAGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKLLERG*SLNRLE
Trigger: CTCAAGCCTGTTCAAACTCAAACCCCTCTCCAACAA...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTGGCATCATCTATCACACTGTAGATGGCATCTATGTCAAAACTTCTGTTTTGAGTCGGGAACAACATaGGAACTGGACATCCCGGCC +
Preference number: 5 (lower is better)
Translates to: AWHHLSHCRWHLCQNFCFESGTT*ELDIPA
Trigger: GGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTC...AAAACAGAAGTTTTGACATAGATGCCATCTACAGTGTGATAGATGATGCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTCCTTGGGGCGGCTTTaGAGCCTCATCTGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPSLGRL*SLICSK
Trigger: CTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGGA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TTTGAGTCACAGAGTCGGGAACAACATTGGAACTGGACATCCCGGCCACCTGCTCTAGTGAAGCAATACTaGCAAATAACAAGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: FESQSREQHWNWTSRPPALVKQY*QITRRE
Trigger: TTCCCTTCTTGTTATTTGCAAGTATTGCTTCACTAG...AGCAGGTGGCCGGGATGTCCAGTTCCAATGTTGTTCCCGACTCTGTGACTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCAAAACAGTGGGCCCATaGGACCAGTCGCATCTACCT +
Preference number: 5 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGKTVGP*DQSHLP
Trigger: AGGTAGATGCGACTGGTCCAATGGGCCCACTGTTTT...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGACTTCTGCTGGGACATaGCGACCAATCTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSETSAGT*RPIFLP
Trigger: GGGAAGGAAGATTGGTCGCAATGTCCCAGCAGAAGT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000427495.5
CDS-3UTR CAA 90 bp TTTCCGCCTGTGTCGTCTGTGGCAGTTTTGTTGGAGAGGGGTTTGAGTTTGAACCTTTTCAAAAAGACGTaGACCCTCTTACCGACATTT +
Preference number: 5 (lower is better)
Translates to: FPPVSSVAVLLERGLSLNLFKKT*TLLPTF
Trigger: AAATGTCGGTAAGAGGGTCAACGTCTTTTTGAAAAG...GTTCAAACTCAAACCCCTCTCCAACAAAACTGCCACAGACGACACAGGCGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314833.10
CDS-3UTR CAA 90 bp GTCCATGACAGCGATGTACACATACTGCTTGGCATCATCTATCACACTGTAGATTGCAGACTTGATAGCTaGCTGGATATTAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VHDSDVHILLGIIYHTVDCRLDS*LDISRW
Trigger: CCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA...ATCTACAGTGTGATAGATGATGCCAAGCAGTATGTGTACATCGCTGTCATGGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCATCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 5 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GAAAGGGAAAACAACTCACCGATACAAATGCTTGAGATTTGGTTTCATTCAACTTCCTTGGGGCGGCTTTaGAGCCTCATCTGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: ERENNSPIQMLEIWFHSTSLGRL*SLICSK
Trigger: CTTCGAGCAGATGAGGCTCAAAAGCCGCCCCAAGGA...AGTTGAATGAAACCAAATCTCAAGCATTTGTATCGGTGAGTTGTTTTCCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR CAA 90 bp TTGACAATCCAGATCTCCACCAGGGTTTCTGTGGGGCTGTGCTCTTTTCATCCATTCCTTCCAGCTCTCTaGATCAACTGGTTAAATATC +
Preference number: 5 (lower is better)
Translates to: LTIQISTRVSVGLCSFHPFLPAL*INWLNI
Trigger: GATATTTAACCAGTTGATCAAGAGAGCTGGAAGGAA...TGGATGAAAAGAGCACAGCCCCACAGAAACCCTGGTGGAGATCTGGATTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGTTTAGAGGCAGGATCTaGCTATGCTACCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEFRGRI*LCYPGW
Trigger: CCAGCCTGGGTAGCATAGCAAGATCCTGCCTCTAAA...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAATCAGGTCGCTTTTGTTaGTCTGAGTGTGAACTTGGT +
Preference number: 5 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKSGRFC*SECELG
Trigger: ACCAAGTTCACACTCAGACAAACAAAAGCGACCTGA...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAACCAAAAGGAATGGGTTaGAGAGCCAGATATCCACTT +
Preference number: 5 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKPKGMG*RARYPL
Trigger: AAGTGGATATCTGGCTCTCAAACCCATTCCTTTTGG...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCCCATCTGTGTTTGTCTaGCAAGGGGCTCAGAATGTC +
Preference number: 5 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGPSVFV*QGAQNV
Trigger: GACATTCTGAGCCCCTTGCAAGACAAACACAGATGG...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS GCA 90 bp CTCATCACACACCTCACAGAGAGGCATGTTGTTAACAGAAGGCTTTaGCTGGAACATTATTTTAGTGTAGTTCTCGTGTCTTCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LITHLTERHVVNRRL*LEHYFSVVLVSSSA
Trigger: TGCACTGGAAGACACGAGAACTACACTAAAATAATGTTCCAGGCAAAGCCTTCTGTTAACAACATGCCTCTCTGTGAGGTGTGTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474177.1
CDS-3UTR CAA 90 bp CAGAGCTGTCCTGTCAGTTTCTTCATCATGTTATACGTTCCGGGGATCCTTTCCACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATC +
Preference number: 5 (lower is better)
Translates to: QSCPVSFFIMLYVPGILSTFKLQ*AISVQI
Trigger: GATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...GGAAAGGATCCCCGGAACGTATAACATGATGAAGAAACTGACAGGACAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAAGTCACCATGTACTTGTaGCGATTTAACCTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKVTMYL*RFNLGK
Trigger: CTTTCCTAGGTTAAATCGCAACAAGTACATGGTGAC...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp ATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTTAGTTCGGCTGTTTGGTaGGCTGTAAGGTTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: IVIDSIESFGPGLRHSAFSSAVW*AVRFWH
Trigger: ATGCCAAAACCTTACAGCCAACCAAACAGCCGAACT...AAAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGAGCAGTTCGGCTGTTaGGTTGGCTGTAAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEEQFGC*VGCKVL
Trigger: CAAAACCTTACAGCCAACCAAACAGCCGAACTGCTC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGAGAGGGGTTTGAGTTaGAACAGGCTTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEERGLS*NRLEQF
Trigger: GAACTGCTCAAGCCTGTTCAAACTCAAACCCCTCTC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGTCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSESSVAV*LERGLS
Trigger: ACTCAAACCCCTCTCCAACAAAACTGCCACAGACGA...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACACCTGGTGATAGCATTTaGCCAGGCCTCAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTPGDSI*PGLKRK
Trigger: TTTCCTTTTGAGGCCTGGCAAAATGCTATCACCAGG...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCCCATCGGAAGGTCATTaGAATTCCACAGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGPSEGH*NSTGER
Trigger: TCTCTCTCCTGTGGAATTCAAATGACCTTCCGATGG...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGATATACACGTGCTGTTaGTCCACGATCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEIYTCC*STIQKE
Trigger: CTCCTTCTGGATCGTGGACAAACAGCACGTGTATAT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CTTCTCTTATTTTTGCATCCAAGTCTGGCCAGTAAGTCCTTTTGGTGCTTGTGCGTCACCATGTACTTGTaGCGATTTAACCTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLLFLHPSLASKSFWCLCVTMYL*RFNLGK
Trigger: CTTTCCTAGGTTAAATCGCAACAAGTACATGGTGAC...GCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAAATAAGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGACTCACATCTGCCTGGTaGATAACAAGGCCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRLTSAW*ITRPVP
Trigger: TGGCACGGGCCTTGTTATCAACCAGGCAGATGTGAG...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGGTTGGCTGTAAGGTTTaGGCATACGGTGAATACCAG +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEVGCKV*AYGEYQ
Trigger: CTGGTATTCACCGTATGCCAAAACCTTACAGCCAAC...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGAGTTCGGCTGTTTGGTaGGCTGTAAGGTTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSESSAVW*AVRFWH
Trigger: ATGCCAAAACCTTACAGCCAACCAAACAGCCGAACT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp GCTTGGCATCATCTATCACACTGTAGATGGCATCTATGTCAAAACTTCTGTTTTGAGCAGTTCGGCTGTTaGGTTGGCTGTAAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: AWHHLSHCRWHLCQNFCFEQFGC*VGCKVL
Trigger: CAAAACCTTACAGCCAACCAAACAGCCGAACTGCTC...AAAACAGAAGTTTTGACATAGATGCCATCTACAGTGTGATAGATGATGCCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCTTTTATTTTTCAAGGGTGTaGAAGGCTGGCATGAGATGT +
Preference number: 5 (lower is better)
Translates to: HCHRLHRVFWTRFEALCFYFSRV*KAGMRC
Trigger: ACATCTCATGCCAGCCTTCAACACCCTTGAAAAATA...AAAGCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGTCCTCGATCACTCTTTaGGCATTTAGAAATCAAGTC +
Preference number: 5 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKSSITL*AFRNQV
Trigger: GACTTGATTTCTAAATGCCAAAAGAGTGATCGAGGA...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTTGGAGGCCCACAGTATaGATCTTTGATGGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSWRPTV*IFDGVC
Trigger: GCACACACCATCAAAGATCAATACTGTGGGCCTCCA...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTTCCACTTCCTCTCCAATGGTTGGACAAGCAGAGATTCAATTATTTGATAGGCCTTCCTCTCCAATGGTaGGACAAGCAGAGATTCAAT +
Preference number: 5 (lower is better)
Translates to: LPLPLQWLDKQRFNYLIGLPLQW*DKQRFN
Trigger: ATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAG...GCCTATCAAATAATTGAATCTCTGCTTGTCCAACCATTGGAGAGGAAGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CCAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAACAAAGTCCAGACTCATaGTTCAGGAGTCAAGTATTT +
Preference number: 5 (lower is better)
Translates to: PNGKGIYTLGELVEMAVKQSPDS*FRSQVF
Trigger: AAATACTTGACTCCTGAACAATGAGTCTGGACTTTG...TTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TTTCATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCCTTGATTTCAATATTTaGCGAAGTCAGCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: FHCHRLHRVFWTRFEALCLDFNI*RSQLEQ
Trigger: TTGCTCCAGCTGACTTCGCAAAATATTGAAATCAAG...GCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000467561.5
CDS-3UTR CAA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACATCTGTCACCATGTACTaGTTGCGATTTAACCTAGGA +
Preference number: 5 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTSVTMY*LRFNLG
Trigger: TCCTAGGTTAAATCGCAACAAGTACATGGTGACAGA...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTCTGTGGCAGTTTTGTaGGAGAGGGGTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPSVAVL*ERGLSL
Trigger: CAAACTCAAACCCCTCTCCAACAAAACTGCCACAGA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTTCTGTGGCAGTTTTGTaGGAGAGGGGTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSSVAVL*ERGLSL
Trigger: CAAACTCAAACCCCTCTCCAACAAAACTGCCACAGA...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTACCCAATCAAAATTTCCAATATAAGCTGCTCCATCTGTCACCATGTACTTGTTGCAGACTTGATAGCTaGCTGGATATTAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LPNQNFQYKLLHLSPCTCCRLDS*LDISRW
Trigger: CCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA...ACAAGTACATGGTGACAGATGGAGCAGCTTATATTGGAAATTTTGATTGGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CAAATGGGAAGGGAATTTACACGTTGGGTGAGCTGGTTGAGATGGCTGTTAAAGTTTCCTTTTTGCCTCTaGGGAAATAAATCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: QMGREFTRWVSWLRWLLKFPFCL*GNKSRN
Trigger: ATTCCTGGATTTATTTCCCAAGAGGCAAAAAGGAAA...CTTTAACAGCCATCTCAACCAGCTCACCCAACGTGTAAATTCCCTTCCCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TCAAATGGAAGTTTTCAACTGGTAGGCCCATCGGAAGGTCATTTGAATTCCACAAGCACTCCAAATTGTTaGGCTCAAGTAGGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: SNGSFQLVGPSEGHLNSTSTPNC*AQVGFQ
Trigger: CTGAAAACCTACTTGAGCCAAACAATTTGGAGTGCT...TGTGGAATTCAAATGACCTTCCGATGGGCCTACCAGTTGAAAACTTCCATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp GTGGAGGTAGGGTCTCTCCAAGACACCAGGAAAACTATAGATCCACCTATGAAATTCACTTTTAAGCCTTaGCTAACCTCTCCAATGATA +
Preference number: 5 (lower is better)
Translates to: VEVGSLQDTRKTIDPPMKFTFKP*LTSPMI
Trigger: TATCATTGGAGAGGTTAGCAAAGGCTTAAAAGTGAA...TTTCATAGGTGGATCTATAGTTTTCCTGGTGTCTTGGAGAGACCCTACCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGATGTACACATACTGCTaGGCATCATCTATCACACTG +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEMYTYC*ASSITL
Trigger: CAGTGTGATAGATGATGCCAAGCAGTATGTGTACAT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGATGCTTCTCTTATTTTaGCATCCAAGTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEMLLLF*HPSLAS
Trigger: ACTGGCCAGACTTGGATGCAAAAATAAGAGAAGCAT...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CTTCTCTTATTTTTGCATCCAAGTCTGGCCAGTAAGTCCTTTTGGTGCTTGTGCAAAGGTGTGATTCTTTaGTTCTTTTGTAGCACAAGC +
Preference number: 5 (lower is better)
Translates to: LLLFLHPSLASKSFWCLCKGVIL*FFCSTS
Trigger: GCTTGTGCTACAAAAGAACAAAAGAATCACACCTTT...GCACAAGCACCAAAAGGACTTACTGGCCAGACTTGGATGCAAAAATAAGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp CACATACTGCTTGGCATCATCTATCACACTGTAGATGGCATCTATGTCAAAACTTCTGTCACCATGTACTaGTTGCGATTTAACCTAGGA +
Preference number: 5 (lower is better)
Translates to: HILLGIIYHTVDGIYVKTSVTMY*LRFNLG
Trigger: TCCTAGGTTAAATCGCAACAAGTACATGGTGACAGA...AGTTTTGACATAGATGCCATCTACAGTGTGATAGATGATGCCAAGCAGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314833.10
ENST00000366545.5
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGTCTGTCACCATGTACTaGTTGCGATTTAACCTAGGA +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSESVTMY*LRFNLG
Trigger: TCCTAGGTTAAATCGCAACAAGTACATGGTGACAGA...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATCGTCTGTGGCAGTTTaGTTGGAGAGGGGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRSSVAV*LERGLS
Trigger: ACTCAAACCCCTCTCCAACAAAACTGCCACAGACGA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TTTCATTGTCATAGACTCCATAGAGTCTTTTGGACCAGGTTTGAGGCACTCTGCCACCGATACAAATGCTaGAGATTTGGTTTCATTCAA +
Preference number: 5 (lower is better)
Translates to: FHCHRLHRVFWTRFEALCHRYKC*RFGFIQ
Trigger: TTGAATGAAACCAAATCTCAAGCATTTGTATCGGTG...GCAGAGTGCCTCAAACCTGGTCCAAAAGACTCTATGGAGTCTATGACAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467561.5
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAATATACACGTGCTGTTaGTCCACGATCCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRIYTCC*STIQKE
Trigger: CTCCTTCTGGATCGTGGACAAACAGCACGTGTATAT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTATGTACACATACTGCTaGGCATCATCTATCACACTG +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPMYTYC*ASSITL
Trigger: CAGTGTGATAGATGATGCCAAGCAGTATGTGTACAT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATGCAGACTTGATAGCTaGCTGGATATTAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRCRLDS*LDISRW
Trigger: CCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATC +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPTFKLQ*AISVQI
Trigger: GATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTTCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp TGCAGACTTGATAGCTTGCTGGATATTAGCAGGTGGCTACATAATTTTTCTGAGTTCAAAGATGCCTCCTaGTGTGAATATACAAAACAG +
Preference number: 5 (lower is better)
Translates to: CRLDSLLDISRWLHNFSEFKDAS*CEYTKQ
Trigger: CTGTTTTGTATATTCACACAAGGAGGCATCTTTGAA...CTCAGAAAAATTATGTAGCCACCTGCTAATATCCAGCAAGCTATCAAGTCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAATGTACACATACTGCTaGGCATCATCTATCACACTG +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRMYTYC*ASSITL
Trigger: CAGTGTGATAGATGATGCCAAGCAGTATGTGTACAT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTAAAGGTGTGATTCTTTaGTTCTTTTGTAGCACAAGC +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPKGVIL*FFCSTS
Trigger: GCTTGTGCTACAAAAGAACAAAAGAATCACACCTTT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTAAAGGTGTGATTCTTTaGTTCTTTTGTAGCACAAGC +
Preference number: 5 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSKGVIL*FFCSTS
Trigger: GCTTGTGCTACAAAAGAACAAAAGAATCACACCTTT...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATATTTTTCAAGGGTGTaGAAGGCTGGCATGAGATGT +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRYFSRV*KAGMRC
Trigger: ACATCTCATGCCAGCCTTCAACACCCTTGAAAAATA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTACGTCTAGTTTTGTGTaGATGTTATTCATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPTSSFV*MLFMPK
Trigger: CTTTGGCATGAATAACATCAACACAAAACTAGACGT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp AATAAACACTTGGTTTTATCAGTCTCTTCTCCAAGGCAAAATCCTCACCTTCCTATGGAGGTTGATAGTTaGTTTAGCACAGAAACAAGT +
Preference number: 5 (lower is better)
Translates to: NKHLVLSVSSPRQNPHLPMEVDS*FSTETS
Trigger: ACTTGTTTCTGTGCTAAACAAACTATCAACCTCCAT...AGGAAGGTGAGGATTTTGCCTTGGAGAAGAGACTGATAAAACCAAGTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAAAGCACACCAGTTCATaGGGAACAAGTACAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRKHTSS*GTSTER
Trigger: TCTTTCTGTACTTGTTCCCAATGAACTGGTGTGCTT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CCAATTAGTCATAAAACCATGCTACCCTTAAAAATACAGCTTCCTTCCAGCTCTAGATTGGTTGTGCATTaGTGTGGGAAAACTCTAAAT +
Preference number: 5 (lower is better)
Translates to: PISHKTMLPLKIQLPSSSRLVVH*CGKTLN
Trigger: ATTTAGAGTTTTCCCACACAAATGCACAACCAATCT...AGAGCTGGAAGGAAGCTGTATTTTTAAGGGTAGCATGGTTTTATGACTAATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAAGACCTCAAATTGTCTaGACTGCAGAAGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRRPQIV*TAEVTA
Trigger: AGCAGTTACTTCTGCAGTCAAGACAATTTGAGGTCT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGAACTTTCAAACTGCAGTaGGCTATTTCAGTGCAAATC +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRTFKLQ*AISVQI
Trigger: GATTTGCACTGAAATAGCCAACTGCAGTTTGAAAGT...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp CTGTCAGAGGTAACAAATACAAAAGTCTTAATTTTAGTGTACACGACGCTAAGATCCCAAAATGCAGACTaGATAGCTTGCTGGATATTA +
Preference number: 5 (lower is better)
Translates to: LSEVTNTKVLILVYTTLRSQNAD*IACWIL
Trigger: TAATATCCAGCAAGCTATCAAGTCTGCATTTTGGGA...TCTTAGCGTCGTGTACACTAAAATTAAGACTTTTGTATTTGTTACCTCTGACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314833.10
ENST00000366545.5
ENST00000427495.5
ENST00000442594.6
ENST00000536534.7
CDS-3UTR CAA 90 bp AATCATCACCAAAGCCACGTTTACTTTATTGGGATAACTGGCAGAGTTATAACTATAAAGCACTCCAAATaGTTTGGCTCAAGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: NHHQSHVYFIGITGRVITIKHSK*FGSSRF
Trigger: AAACCTACTTGAGCCAAACAATTTGGAGTGCTTTAT...AGTTATAACTCTGCCAGTTATCCCAATAAAGTAAACGTGGCTTTGGTGATGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536534.7
CDS GCA 72 bp CTGGAGGAGCTGCTCCGGGGAGACAGAAGTGCCCGGTaGGGCGGCGACGTCGCCCGGCGGCTGCGGTCCCGA +
Preference number: 6 (lower is better)
Translates to: LEELLRGDRSAR*GGDVARRLRSR
Trigger: TCGGGACCGCAGCCGCCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCCGGAGCAGCTCCTCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366545.5
ENST00000442594.6
CDS GCA 72 bp GAAAGGAACCTGCTCCGGGGAGACAGAAGTGCCCGGTaGGGCGGCGACGTCGCCCGGCGGCTGCGGTCCCGA +
Preference number: 6 (lower is better)
Translates to: ERNLLRGDRSAR*GGDVARRLRSR
Trigger: TCGGGACCGCAGCCGCCGGGCGACGTCGCCGCCGCACCGGGCACTTCTGTCTCCCCGGAGCAGGTTCCTTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467561.5
ENST00000536534.7
CDS TCA 72 bp GAGAGCCACTCGTGCTGCCGGATCTCCATCCTGACATaGCCGGGCGGCCGCCGGCGAGCAGCGGACTCGGGA +
Preference number: 6 (lower is better)
Translates to: ESHSCCRISILT*PGGRRRAADSG
Trigger: TCCCGAGTCCGCTGCTCGCCGGCGGCCGCCCGGTCATGTCAGGATGGAGATCCGGCAGCACGAGTGGCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000467561.5
ENST00000536534.7
CDS TCA 72 bp AGGCCGAGAGCCACTCGTGCTGCCGGATCTCCATCCTaGCATGACCGGGCGGCCGCCGGCGAGCAGCGGACT +
Preference number: 6 (lower is better)
Translates to: RPRATRAAGSPS*HDRAAAGEQRT
Trigger: AGTCCGCTGCTCGCCGGCGGCCGCCCGGTCATGTCAGGATGGAGATCCGGCAGCACGAGTGGCTCTCGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000467561.5
ENST00000536534.7
CDS CCA 72 bp GGGCGGCTTTTGAGCCTCATCTGCTCGAAGCCCTCATaGGGGGAGGCCGAGAGCCACTCGTGCTGCCGGATC +
Preference number: 6 (lower is better)
Translates to: GRLLSLICSKPS*GEAESHSCCRI
Trigger: GATCCGGCAGCACGAGTGGCTCTCGGCCTCCCCCCATGAGGGCTTCGAGCAGATGAGGCTCAAAAGCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000467561.5
ENST00000536534.7
CDS TCA 72 bp TCCGAAGCCAGACGCTGGCGCTGTAGTCCTGCTGCTTaGCGCTGCTGTAGAAGTTCGCGCCCACTCGGGTCA +
Preference number: 6 (lower is better)
Translates to: SEARRWRCSPAA*RCCRSSRPLGS
Trigger: TGACCCGAGTGGGCGCGAACTTCTACAGCAGCGTCAAGCAGCAGGACTACAGCGCCAGCGTCTGGCTTCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366545.5
ENST00000442594.6
ENST00000467561.5
ENST00000536534.7
CDS CAA 90 bp AGCTGGAGTAGGAACCTGCTGTGCTCCTTGCCGTTCTTGAAGCTGTaGGTGTCCAACTTCCTTTCAAGGAAGGGCTATGCTGGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: SWSRNLLCSLPFLKL*VSNFLSRKGYAGPE
Trigger: CTCTGGGCCAGCATAGCCCTTCCTTGAAAGGAAGTTGGACACCAACAGCTTCAAGAACGGCAAGGAGCACAGCAGGTTCCTACTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474177.1
CDS CAA 90 bp GGCAATGATCACATCGCAAGCTGGAGTAGGAACCTGCTGTGCTCCTaGCCGTTCTTGAAGCTGTTGGTGTCCAACTTCCTTTCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: GNDHIASWSRNLLCS*PFLKLLVSNFLSRK
Trigger: CTTCCTTGAAAGGAAGTTGGACACCAACAGCTTCAAGAACGGCAAGGAGCACAGCAGGTTCCTACTCCAGCTTGCGATGTGATCATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474177.1
CDS GCA 72 bp AATGATCACATCGCAAGCTGGAGTAGGAACCTGCTGTaGTCCTTGCCGTTCTTGAAGCTGTTGGTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: NDHIASWSRNLL*SLPFLKLLVSN
Trigger: GTTGGACACCAACAGCTTCAAGAACGGCAAGGAGCACAGCAGGTTCCTACTCCAGCTTGCGATGTGATCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474177.1
CDS CCA 72 bp AGAGAAGAAGCTTCAGGCAATGATCACATCGCAAGCTaGAGTAGGAACCTGCTGTGCTCCTTGCCGTTCTTG +
Preference number: 6 (lower is better)
Translates to: REEASGNDHIAS*SRNLLCSLPFL
Trigger: CAAGAACGGCAAGGAGCACAGCAGGTTCCTACTCCAGCTTGCGATGTGATCATTGCCTGAAGCTTCTTCTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474177.1
CDS CAA 72 bp AGGAACCTGCTGTGCTCCTTGCCGTTCTTGAAGCTGTaGGTGTCCAACTTCCTTTCAAGGAAGGGCTATGCT +
Preference number: 6 (lower is better)
Translates to: RNLLCSLPFLKL*VSNFLSRKGYA
Trigger: AGCATAGCCCTTCCTTGAAAGGAAGTTGGACACCAACAGCTTCAAGAACGGCAAGGAGCACAGCAGGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474177.1
CDS GCA 72 bp CACCTCACAGAGAGGCATGTTGTTAACAGAAGGCTTTaGCTGGAACATTATTTTAGTGTAGTTCTCGTGTCT +
Preference number: 6 (lower is better)
Translates to: HLTERHVVNRRL*LEHYFSVVLVS
Trigger: AGACACGAGAACTACACTAAAATAATGTTCCAGGCAAAGCCTTCTGTTAACAACATGCCTCTCTGTGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474177.1