RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000129219

Ensembl transcript IDs: ENST00000263088.11, ENST00000571273.5, ENST00000572127.1, ENST00000572199.1, ENST00000572940.5, ENST00000574268.1, ENST00000574796.1, ENST00000575246.6, ENST00000575316.1, ENST00000575813.5, ENST00000575945.1, ENST00000576329.1, ENST00000576864.1, ENST00000576983.5

Found 537 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCGCTGGATGAAGTGCCGGGCAAGGTCCCGGGCCGGTAGGCCATaGACGACCACCCCAACGTCCCGCCATGGCATCCGAGGGGTCGTC +
Preference number: 1 (lower is better)
Translates to: QRWMKCRARSRAGRP*TTTPTSRHGIRGVV
Trigger: GACGACCCCTCGGATGCCATGGCGGGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCGGGACCTTGCCCGGCACTTCATCCAGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 90 bp GGTGCAGCTGTAGGAAGTCTCTGCCTGGGCCCTGTGCCAGCTCAGTaGTCTCTTGGGCCCACCACCGTGCCTGCCGGTAGCTGCTGCACT +
Preference number: 1 (lower is better)
Translates to: GAAVGSLCLGPVPAQ*SLGPTTVPAGSCCT
Trigger: AGTGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTGGCACAGGGCCCAGGCAGAGACTTCCTACAGCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 90 bp GCCTGGGCCCTGTGCCAGCTCAGTGATCTCTTGGGCCCACCACCGTaGCTGCCGGTAGCTGCTGCACTTGAGAATCAAGGACCTGTGGGA +
Preference number: 1 (lower is better)
Translates to: AWALCQLSDLLGPPP*LPVAAALENQGPVG
Trigger: TCCCACAGGTCCTTGATTCTCAAGTGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTGGCACAGGGCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 90 bp AGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTaGTCCTTTTCCCCACTTGCACCTCAAAGCCAGGGTCAAAGAGCT +
Preference number: 1 (lower is better)
Translates to: RTCGRYRSARRAVPP*SFSPLAPQSQGQRA
Trigger: AGCTCTTTGACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 90 bp GAGAATCAAGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTaGCTCCGTGCTCCTTTTCCCCACTTGCACCTCAAAGCCAGGGTC +
Preference number: 1 (lower is better)
Translates to: ENQGPVGGIDPHAVP*LRAPFPHLHLKARV
Trigger: GACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCTTGATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 90 bp ACCTCTTGGACCAGCGATAACAAACTTGGTCTCGGCCACAGCAGGTaGGGCCAGGAACACGGTGGCCACCTGAGCGCTTCCGGATCATCC +
Preference number: 1 (lower is better)
Translates to: TSWTSDNKLGLGHSR*GQEHGGHLSASGSS
Trigger: GGATGATCCGGAAGCGCTCAGGTGGCCACCGTGTTCCTGGCCTCACCTGCTGTGGCCGAGACCAAGTTTGTTATCGCTGGTCCAAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CCA 90 bp GCAGGCTGGTGGAGGGAGTTAATGTGCCCTCCTTCCTTCCCCTGGTaGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGG +
Preference number: 1 (lower is better)
Translates to: AGWWRELMCPPSFPW*GLKPEVALSFPPPW
Trigger: CCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGAAGGAGGGCACATTAACTCCCTCCACCAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR CCA 90 bp TCAGCAGGCTGGTGGAGGGAGTTAATGTGCCCTCCTTCCTTCCCCTaGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCT +
Preference number: 1 (lower is better)
Translates to: SAGWWRELMCPPSFP*WGLKPEVALSFPPP
Trigger: AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGAAGGAGGGCACATTAACTCCCTCCACCAGCCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR GCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATaGCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: SHVRVLCNTSSSLQE*LPPQISKGTALSPW
Trigger: CCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR TCA 90 bp CTCCTCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTaGATGGGCCGGACGCTTCAGGTAAACCTCAGGACTCAACCACCA +
Preference number: 1 (lower is better)
Translates to: LLRLPLEHNVQSPVI*MGRTLQVNLRTQPP
Trigger: TGGTGGTTGAGTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
3UTR TCA 90 bp GTGCTCCTTTTCCCCACTTGCACCTCAAAGCCAGGGTCAAAGAGCTaGACAAATGAGATGGCACCTGTCTCGAGGCACATGTACAGCAGG +
Preference number: 1 (lower is better)
Translates to: VLLFPTCTSKPGSKS*TNEMAPVSRHMYSR
Trigger: CCTGCTGTACATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 90 bp CCAGTCTGTGATGAAAATCTCCTCTTGAGCTCGAAGGATGGCATCTaGCACAGCAGCAAAGTAACCTGCCCCATTCACAAACCACCGGGC +
Preference number: 1 (lower is better)
Translates to: PVCDENLLLSSKDGI*HSSKVTCPIHKPPG
Trigger: GCCCGGTGGTTTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATCACAGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 90 bp TTTCCCCACTTGCACCTCAAAGCCAGGGTCAAAGAGCTGAACAAATaGGATGGCACCTGTCTCGAGGCACATGTACAGCAGGAAGGAGTC +
Preference number: 1 (lower is better)
Translates to: FPHLHLKARVKELNK*DGTCLEAHVQQEGV
Trigger: GACTCCTTCCTGCTGTACATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCTTTGAGGTGCAAGTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CCA 90 bp CCACTTGCACCTCAAAGCCAGGGTCAAAGAGCTGAACAAATGAGATaGCACCTGTCTCGAGGCACATGTACAGCAGGAAGGAGTCCTTCA +
Preference number: 1 (lower is better)
Translates to: PLAPQSQGQRAEQMR*HLSRGTCTAGRSPS
Trigger: TGAAGGACTCCTTCCTGCTGTACATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCTTTGAGGTGCAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 90 bp GTCCACAATCTCATCGCCCACCTTGTTCAGAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTGATTCTGGGGCAAGAATCAGAGACA +
Preference number: 1 (lower is better)
Translates to: VHNLIAHLVQNRPPI*AANEELILGQESET
Trigger: TGTCTCTGATTCTTGCCCCAGAATCAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTTCTGAACAAGGTGGGCGATGAGATTGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 90 bp TCATGGCATGGTAGTTGCGATAGAAAGACATGGTCAAGAGACGGTTaGGGTAATTCTCCAGGTATTTCTGTTTGCTGGCTGCATGTCTGG +
Preference number: 1 (lower is better)
Translates to: SWHGSCDRKTWSRDG*GNSPGISVCWLHVW
Trigger: CCAGACATGCAGCCAGCAAACAGAAATACCTGGAGAATTACCTCAACCGTCTCTTGACCATGTCTTTCTATCGCAACTACCATGCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp TGCCGGGCAAGGTCCCGGGCCGGTAGGCCATGGACGACCACCCCAACGTCCCGCTCGAAGGATGGCATCTaGCACAGCAGCAAAGTAACC +
Preference number: 2 (lower is better)
Translates to: CRARSRAGRPWTTTPTSRSKDGI*HSSKVT
Trigger: GGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGA...GCGGGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCGGGACCTTGCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR TCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGGGCACAGCAGCTGGTaGCCTCTCCCTGACGGGGGC +
Preference number: 2 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFGHSSW*PLPDGG
Trigger: GCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCC...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR GCA 90 bp AGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTGCTCCTTTAGGGCATCTCTCTGTTaGCTGCATCTCGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RTCGRYRSARRAVPPCSFRASLC*LHLGLE
Trigger: CTCCAGCCCGAGATGCAGGCAACAGAGAGATGCCCT...AAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGGAGCCAGACGTGGTaGGGCACAGCAGCTGGTGAC +
Preference number: 2 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRGSQTW*GTAAGD
Trigger: GTCACCAGCTGCTGTGCCCCACCACGTCTGGCTCCC...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGCAGGGAGCCAGACGTaGTGGGGCACAGCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGAGSQT*WGTAAG
Trigger: ACCAGCTGCTGTGCCCCACCACGTCTGGCTCCCTGC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR CCA 90 bp GTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATCCCAGCGGCCATAGGCAAGTGGCTGCATGTCTGGTaGAGCCCTCAGGACCTGCCC +
Preference number: 2 (lower is better)
Translates to: VSKVSQSVVQVIPAAIGKWLHVW*SPQDLP
Trigger: GGGCAGGTCCTGAGGGCTCCACCAGACATGCAGCCA...CTTGCCTATGGCCGCTGGGATGACCTGCACTACCGACTGACTGACCTTGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CCA 90 bp TCACCACCAGCCACCTCTTGGACCAGCGATAACAAACTTGGTCTCGGCCACAGCAGGCCAGGAACACGGTaGCCACCTGAGCGCTTCCGG +
Preference number: 2 (lower is better)
Translates to: SPPATSWTSDNKLGLGHSRPGTR*PPERFR
Trigger: CCGGAAGCGCTCAGGTGGCCACCGTGTTCCTGGCCT...GCTGTGGCCGAGACCAAGTTTGTTATCGCTGGTCCAAGAGGTGGCTGGTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGGGAGCCAGACGTGGTaGGGCACAGCAGCTGGTGAC +
Preference number: 2 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFGSQTW*GTAAGD
Trigger: GTCACCAGCTGCTGTGCCCCACCACGTCTGGCTCCC...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR TCA 90 bp AGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTGCTCCTTTCCAGGGTCAAAGAGCTaGACAAATGAGATGGCACCT +
Preference number: 2 (lower is better)
Translates to: RTCGRYRSARRAVPPCSFPGSKS*TNEMAP
Trigger: AGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGG...AAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCCCCTTCAGGAATGCCTaGCTCCCCAGATCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTPFRNA*LPRSQR
Trigger: CCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGG...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR GCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTCCGCACGCCGTGCCGTaGCTCCGTGCTCCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVPHAVP*LRAPFP
Trigger: GGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGG...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp CCCTCCTCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTGAATGGTCGATCCGCACGCCGTaGCGTGCCTCCGTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: PSSAFLLSIMSSLQSSEWSIRTP*RASVLL
Trigger: AAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGA...CCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGATCTCAAAGGGCACTaGCCTCAGTCCTTGGGGTTA +
Preference number: 2 (lower is better)
Translates to: PLVGAEARSGFILPSTLADLKGH*PQSLGL
Trigger: TAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR GCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAAGTTCCCTTCAGGAATaGCTGCCTCCCCAGATCTCA +
Preference number: 2 (lower is better)
Translates to: PLVGAEARSGFILPSTLASSLQE*LPPQIS
Trigger: TGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACT...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR GCA 90 bp GTAGAGGAAGTGCTGGCTCTCCCTGATGGTGTGCAGGTAGGCATTGAGGATGGACGTGCCGTGCCTCCGTaGTCCTTTTCCCCACTTGCA +
Preference number: 2 (lower is better)
Translates to: VEEVLALPDGVQVGIEDGRAVPP*SFSPLA
Trigger: TGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACG...TCCATCCTCAATGCCTACCTGCACACCATCAGGGAGAGCCAGCACTTCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTGAGAGAGGTCTGGGGTaGCTGGTGAGTCTGGGCGCG +
Preference number: 2 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVERGLG*LVSLGA
Trigger: CGCGCCCAGACTCACCAGCCACCCCAGACCTCTCTC...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGCCCTTCAGGAATGCCTaGCTCCCCAGATCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: AEARSGFILPSTLAAMGWPFRNA*LPRSQR
Trigger: CCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGG...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR GCA 90 bp AGGCAGCTGATTCAGAGGAGTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATGCTGTAGGAAGTCTCTaGCTGGGCCCTGTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: RQLIQRSLQGQSVGSAGHAVGSL*LGPVPA
Trigger: AGCTGGCACAGGGCCCAGGCAGAGACTTCCTACAGC...ATGACCTGCACTACCGACTGACTGACCTTGGAGACTCCTCTGAATCAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp AGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTGCTCCTTTTCATGGCATGGTAGTTaGGATAGAAAGACATGGTCA +
Preference number: 2 (lower is better)
Translates to: RTCGRYRSARRAVPPCSFSWHGS*DRKTWS
Trigger: TGACCATGTCTTTCTATCGCAACTACCATGCCATGA...AAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp GTAGAGGAAGTGCTGGCTCTCCCTGATGGTGTGCAGGTAGGCATTGAGGATGGAACCTTTATGTTGGGGTaGAGCAGCATCAGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: VEEVLALPDGVQVGIEDGTFMLG*SSISAL
Trigger: GAGGGCGCTGATGCTGCTGCACCCCAACATAAAGGT...TCCATCCTCAATGCCTACCTGCACACCATCAGGGAGAGCCAGCACTTCCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCTTCTCCTTTGCAGCATaGAGAAGTGGTTTGCACTGG +
Preference number: 2 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTFSFAA*RSGLHW
Trigger: CCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAA...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR CCA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGAGAATCAAGGACCTGTaGGAGGTATCGATCCGCACG +
Preference number: 2 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTRIKDL*EVSIRT
Trigger: CGTGCGGATCGATACCTCCCACAGGTCCTTGATTCT...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR TCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTCAGTCTCCAGTCATCTaGATGGGCCGGACGCTTCAG +
Preference number: 2 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVQSPVI*MGRTLQ
Trigger: CTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTG...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR TCA 90 bp AGGCAGCTGATTCAGAGGAGTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATGGTAGCTGCTGCACTTaGGAATCAAGGACCTGTGGG +
Preference number: 2 (lower is better)
Translates to: RQLIQRSLQGQSVGSAGHGSCCT*ESRTCG
Trigger: CCCACAGGTCCTTGATTCTCAAGTGCAGCAGCTACC...ATGACCTGCACTACCGACTGACTGACCTTGGAGACTCCTCTGAATCAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCCCAGGGTTGGGAGTaGCCTTTTCAGCTATTTCTC +
Preference number: 2 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFAQGWE*PFQLFL
Trigger: GAGAAATAGCTGAAAAGGGCACTCCCAACCCTGGGC...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR CCA 90 bp TGTCCAGTCTCCAGTCATCTGAATGGGCCGGACGCTTCAGGTAAACCTCAGGACGCTGAACAAATGAGATaGCACCTGTCTCGAGGCACA +
Preference number: 2 (lower is better)
Translates to: CPVSSHLNGPDASGKPQDAEQMR*HLSRGT
Trigger: TGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGC...GTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR TCA 90 bp TCACCACCAGCCACCTCTTGGACCAGCGATAACAAACTTGGTCTCGGCCACAGCATGAAAATCTCCTCTTaGGCTCGAAGGATGGCATCT +
Preference number: 2 (lower is better)
Translates to: SPPATSWTSDNKLGLGHSMKISS*ARRMAS
Trigger: AGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCAT...GCTGTGGCCGAGACCAAGTTTGTTATCGCTGGTCCAAGAGGTGGCTGGTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR TCA 90 bp ATGGAGTTCTCCAGAGTCCCTGCTGACCAGCGGTCCACTGATCGCAAGACCTGTTGGTCAAGAGACGGTTaGGGTAATTCTCCAGGTATT +
Preference number: 2 (lower is better)
Translates to: MEFSRVPADQRSTDRKTCWSRDG*GNSPGI
Trigger: AATACCTGGAGAATTACCTCAACCGTCTCTTGACCA...ACAGGTCTTGCGATCAGTGGACCGCTGGTCAGCAGGGACTCTGGAGAACTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTGATCTCAAAGGGCACTaGCCTCAGTCCTTGGGGTTA +
Preference number: 2 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPDLKGH*PQSLGL
Trigger: TAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR CCA 90 bp CCCAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCGCCTGCATCTCGGGCTaGAGAATAGGCAACGGCAAA +
Preference number: 2 (lower is better)
Translates to: PKANSTSLNSRIDTRTPSACISG*RIGNGK
Trigger: TTTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGC...GGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CCA 90 bp GTAGAGGAAGTGCTGGCTCTCCCTGATGGTGTGCAGGTAGGCATTGAGGATGGACCAGGAACTCTGTCATaGCATGGTAGTTGCGATAGA +
Preference number: 2 (lower is better)
Translates to: VEEVLALPDGVQVGIEDGPGTLS*HGSCDR
Trigger: TCTATCGCAACTACCATGCCATGACAGAGTTCCTGG...TCCATCCTCAATGCCTACCTGCACACCATCAGGGAGAGCCAGCACTTCCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp AGCCAGGGTCAAAGAGCTGAACAAATGAGATGGCACCTGTCTCGAGGCACATGTCATCTCTCTGTTGCCTaGATCTCGGGCTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: SQGQRAEQMRWHLSRGTCHLSVA*ISGWRI
Trigger: TATTCTCCAGCCCGAGATGCAGGCAACAGAGAGATG...ACATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR GCA 90 bp CACCCAGTCCTTGGTGATAAGATTGCTGTAGTCCTTGCCCAGCCAGAAGAATTGCCAGGTATTTCTGTTTaGTGGCTGCATGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: HPVLGDKIAVVLAQPEELPGISV*WLHVWW
Trigger: CCACCAGACATGCAGCCAGCAAACAGAAATACCTGG...CAATTCTTCTGGCTGGGCAAGGACTACAGCAATCTTATCACCAAGGACTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CCA 90 bp CAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCGCCTTCTTGAGCTCGAAGGATaGCATCTGCCACAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: QFHFFKQQNRHTDTLLRLLELEG*HLPQQQ
Trigger: TTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAG...AAGGCGGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
3UTR CCA 72 bp ATGAAGTGCCGGGCAAGGTCCCGGGCCGGTAGGCCATaGACGACCACCCCAACGTCCCGCCATGGCATCCGA +
Preference number: 3 (lower is better)
Translates to: MKCRARSRAGRP*TTTPTSRHGIR
Trigger: TCGGATGCCATGGCGGGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCGGGACCTTGCCCGGCACTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 72 bp GCCACAGCAGGTGAGGCCAGGAACACGGTGGCCACCTaGGCGCTTCCGGATCATCCCCTCCAGTCCTTTGCG +
Preference number: 3 (lower is better)
Translates to: ATAGEARNTVAT*ALPDHPLQSFA
Trigger: CGCAAAGGACTGGAGGGGATGATCCGGAAGCGCTCAGGTGGCCACCGTGTTCCTGGCCTCACCTGCTGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 72 bp GGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTaGTCCTTTTCCCCACTTGCACCTCAAAGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: GRYRSARRAVPP*SFSPLAPQSQG
Trigger: ACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 72 bp GGGCCCACCACCGTGCCTGCCGGTAGCTGCTGCACTTaGGAATCAAGGACCTGTGGGAGGTATCGATCCGCA +
Preference number: 3 (lower is better)
Translates to: GPTTVPAGSCCT*ESRTCGRYRSA
Trigger: TGCGGATCGATACCTCCCACAGGTCCTTGATTCTCAAGTGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 72 bp GGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTaGCTCCGTGCTCCTTTTCCCCACTTGCACCTCAAA +
Preference number: 3 (lower is better)
Translates to: GPVGGIDPHAVP*LRAPFPHLHLK
Trigger: TTTGAGGTGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 72 bp ATCAAGGACCTGTGGGAGGTATCGATCCGCACGCCGTaGCGTGCCTCCGTGCTCCTTTTCCCCACTTGCACC +
Preference number: 3 (lower is better)
Translates to: IKDLWEVSIRTP*RASVLLFPTCT
Trigger: GGTGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 72 bp CAGGACCTGCCCGGGGTAGAGAGGGCATCTCTCTGTTaGCTGCATCTCGGGCTGGAGAATAGGCAACGGCAA +
Preference number: 3 (lower is better)
Translates to: QDLPGVERASLC*LHLGLENRQRQ
Trigger: TTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGCAACAGAGAGATGCCCTCTCTACCCCGGGCAGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CCA 72 bp CTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTaGCAGCAATGGGCTGGGAGGGCCCTGGGACAGGGA +
Preference number: 3 (lower is better)
Translates to: LKPEVALSFPPP*QQWAGRALGQG
Trigger: TCCCTGTCCCAGGGCCCTCCCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR GCA 72 bp CTGTGCCAGCTCAGTGATCTCTTGGGCCCACCACCGTaGCTGCCGGTAGCTGCTGCACTTGAGAATCAAGGA +
Preference number: 3 (lower is better)
Translates to: LCQLSDLLGPPP*LPVAAALENQG
Trigger: TCCTTGATTCTCAAGTGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CCA 72 bp TCTCCAGGTATTTCTGTTTGCTGGCTGCATGTCTGGTaGAGCCCTCAGGACCTGCCCGGGGTAGAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: SPGISVCWLHVW*SPQDLPGVERA
Trigger: TGCCCTCTCTACCCCGGGCAGGTCCTGAGGGCTCCACCAGACATGCAGCCAGCAAACAGAAATACCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CAA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTCACTGCCCTCAGTCCTaGGGGTTAAGGGGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFHCPQS*GLRGRE
Trigger: CTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTG...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR CAA 90 bp ATGGAGTTCTCCAGAGTCCCTGCTGACCAGCGGTCCACTGATCGCAAGACCTGTGGCCCACAACGTCACTaGGTCTGGGTGACGCATCAC +
Preference number: 3 (lower is better)
Translates to: MEFSRVPADQRSTDRKTCGPQRH*VWVTHH
Trigger: GTGATGCGTCACCCAGACCAAGTGACGTTGTGGGCC...ACAGGTCTTGCGATCAGTGGACCGCTGGTCAGCAGGGACTCTGGAGAACTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 72 bp TCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTaGCCCATTCACAAACCACCGGGCCAAGGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: SKDGICHSSKVT*PIHKPPGQGPR
Trigger: CCTGGGACCTTGGCCCGGTGGTTTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CCA 72 bp GGCAGGAAGAGGAAGGGAACAATGGGTAGTAGGGCCTaGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTT +
Preference number: 3 (lower is better)
Translates to: GRKRKGTMGSRA*GRAPFSWNKRL
Trigger: AAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCATTGTTCCCTTCCTCTTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR GCA 72 bp AGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATaGCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTC +
Preference number: 3 (lower is better)
Translates to: RVLCNTSSSLQE*LPPQISKGTAL
Trigger: GAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR-3UTR CAA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGTCCTCCGCCTTCCTCTaGAGCATAATGTCCAGTCTC +
Preference number: 3 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTSSAFL*SIMSSL
Trigger: GAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGA...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR GCA 72 bp TCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTaGCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTC +
Preference number: 3 (lower is better)
Translates to: SSVTPLVPFRNA*LPRSQRALPSV
Trigger: GACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR TCA 72 bp TTCCCCACTTGCACCTCAAAGCCAGGGTCAAAGAGCTaGACAAATGAGATGGCACCTGTCTCGAGGCACATG +
Preference number: 3 (lower is better)
Translates to: FPTCTSKPGSKS*TNEMAPVSRHM
Trigger: CATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCTTTGAGGTGCAAGTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 72 bp CTCATCGCCCACCTTGTTCAGAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTGATTCTGGGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: LIAHLVQNRPPI*AANEELILGQE
Trigger: TTCTTGCCCCAGAATCAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTTCTGAACAAGGTGGGCGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CCA 72 bp CCTCAAAGCCAGGGTCAAAGAGCTGAACAAATGAGATaGCACCTGTCTCGAGGCACATGTACAGCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: PQSQGQRAEQMR*HLSRGTCTAGR
Trigger: CCTTCCTGCTGTACATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCTTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR-3UTR CAA 90 bp CCCTCCTCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTGAATGGGATGAAAATCTCCTCTaGAGCTCGAAGGATGGCATC +
Preference number: 3 (lower is better)
Translates to: PSSAFLLSIMSSLQSSEWDENLL*SSKDGI
Trigger: GATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATC...CCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
3UTR TCA 72 bp CTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTaGATGGGCCGGACGCTTCAGGTAAACCTCAGGACT +
Preference number: 3 (lower is better)
Translates to: LPLEHNVQSPVI*MGRTLQVNLRT
Trigger: AGTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
3UTR GCA 72 bp GATGAAAATCTCCTCTTGAGCTCGAAGGATGGCATCTaGCACAGCAGCAAAGTAACCTGCCCCATTCACAAA +
Preference number: 3 (lower is better)
Translates to: DENLLLSSKDGI*HSSKVTCPIHK
Trigger: TTTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
3UTR-3UTR CAA 90 bp CAGGAACTCTGTCATGGCATGGTAGTTGCGATAGAAAGACATGGTCAAGAGACGGATGAAAATCTCCTCTaGAGCTCGAAGGATGGCATC +
Preference number: 3 (lower is better)
Translates to: QELCHGMVVAIERHGQETDENLL*SSKDGI
Trigger: GATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATC...CGTCTCTTGACCATGTCTTTCTATCGCAACTACCATGCCATGACAGAGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR TCA 72 bp GGTAGTTGCGATAGAAAGACATGGTCAAGAGACGGTTaGGGTAATTCTCCAGGTATTTCTGTTTGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: GSCDRKTWSRDG*GNSPGISVCWL
Trigger: CAGCCAGCAAACAGAAATACCTGGAGAATTACCTCAACCGTCTCTTGACCATGTCTTTCTATCGCAACTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GGGCCAAGGTCCCAGGCCGGGGTGGGGCGTAGCTGTCATGCCGGTGCAGCTGTACCACCACCTGGGCTGTaGCAGGGACCCCAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: GPRSQAGVGRSCHAGAAVPPPGL*QGPQVR
Trigger: TCGCACCTGGGGTCCCTGTCACAGCCCAGGTGGTGG...TACAGCTGCACCGGCATGACAGCTACGCCCCACCCCGGCCTGGGACCTTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAGGGCACAGCAGCTGGTaGCCTCTCCCTGACGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASGHSSW*PLPDGG
Trigger: GCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCC...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TGCCGGGCAAGGTCCCGGGCCGGTAGGCCATGGACGACCACCCCAACGTCCCGCTGGCTGCATGTCTGGTaGAGCCCTCAGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: CRARSRAGRPWTTTPTSRWLHVW*SPQDLP
Trigger: GGGCAGGTCCTGAGGGCTCCACCAGACATGCAGCCA...GCGGGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCGGGACCTTGCCCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAGGTCCCAGGCCGGGGTaGGGCGTAGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASGPRPG*GVAVMP
Trigger: CGGCATGACAGCTACGCCCCACCCCGGCCTGGGACC...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TGCCGGGCAAGGTCCCGGGCCGGTAGGCCATGGACGACCACCCCAACGTCCCGCGCTGTAGGAAGTCTCTaGCTGGGCCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CRARSRAGRPWTTTPTSRAVGSL*LGPVPA
Trigger: AGCTGGCACAGGGCCCAGGCAGAGACTTCCTACAGC...GCGGGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCGGGACCTTGCCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp TGCCGGGCAAGGTCCCGGGCCGGTAGGCCATGGACGACCACCCCAACGTCCCGCAGTGCTGGCTCTCCCTaGTGGTGTGCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: CRARSRAGRPWTTTPTSRSAGSP*WCAGRH
Trigger: ATGCCTACCTGCACACCATCAGGGAGAGCCAGCACT...GCGGGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCGGGACCTTGCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp TGCCGGGCAAGGTCCCGGGCCGGTAGGCCATGGACGACCACCCCAACGTCCCGCGACTCCATCTGGAGCTaGCTGGAGTCCAGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: CRARSRAGRPWTTTPTSRDSIWS*LESSSS
Trigger: GGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTC...GCGGGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCGGGACCTTGCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCATCGGTGCCCACCACCTaGGCTGTGACAGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASSVPTT*AVTGTP
Trigger: TGGGGTCCCTGTCACAGCCCAGGTGGTGGGCACCGA...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCACGCGGGGTGGGAGGCTaGGAGGCAGCTGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASRGVGG*EAADSE
Trigger: CTCTGAATCAGCTGCCTCCCAGCCTCCCACCCCGCG...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAAGGTGGCCCTGGACCTaGGTGAGCTCAGACCGAGCC +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASRWPWT*VSSDRA
Trigger: GGCTCGGTCTGAGCTCACCCAGGTCCAGGGCCACCT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCACCACCTTGGCAGCAATaGGCTGGGAGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASPPWQQ*AGRALG
Trigger: TCCCAGGGCCCTCCCAGCCCATTGCTGCCAAGGTGG...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAATGGCCAGAAACGGGTaGATCCGGTCGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASMARNG*IRSAGS
Trigger: GGACCCAGCCGACCGGATGCACCCGTTTCTGGCCAT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAGGATCATGCCCTCCTTaGTACCCAGCGGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASGSCPP*YPAGAA
Trigger: TGCTGCCCCCGCTGGGTAGCAAGGAGGGCATGATCC...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR CAA 72 bp GTCTCTGCCTGGGCCCTGTGCCAGCTCAGTGATCTCTaGGGCCCACCACCGTGCCTGCCGGTAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSAWALCQLSDL*GPPPCLPVAAA
Trigger: TGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTGGCACAGGGCCCAGGCAGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp TGGCCACCTGAGCGCTTCCGGATCATCCCCTCCAGTCCTTTGCGGCCCAAGTCCTCGATCCGCACGCCGTaGCGTGCCTCCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WPPERFRIIPSSPLRPKSSIRTP*RASVLL
Trigger: AAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGA...GGACTTGGGCCGCAAAGGACTGGAGGGGATGATCCGGAAGCGCTCAGGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp ATGGACGACCACCCCAACGTCCCGCCATGGCATCCGAGGGGTCGTCTCCCTGTCCCAGTTCGTCCCCAGTaGGGAAGAGGCTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: MDDHPNVPPWHPRGRLPVPVRPQ*GRGSQG
Trigger: CCCCTGAGAGCCTCTTCCCCACTGGGGACGAACTGG...GACAGGGAGACGACCCCTCGGATGCCATGGCGGGACGTTGGGGTGGTCGTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAAGCTCAGTGATCTCTTaGGCCCACCACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASSSVIS*AHHRAC
Trigger: GCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAAGGCTGGGAGGCAGCTaGTTCAGAGGAGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASRLGGS*FRGVSK
Trigger: CTTGGAGACTCCTCTGAATCAGCTGCCTCCCAGCCT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGGTCTGGGGTGGCTGGTaGGTCTGGGCGCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQVWGGW*VWARGG
Trigger: CCCACCCCGCGCCCAGACTCACCAGCCACCCCAGAC...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCGGCCCTGGACCTGGGTaGGCTCAGACCGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTGPGPG*AQTEPR
Trigger: CCTTGGCTCGGTCTGAGCTCACCCAGGTCCAGGGCC...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAAGCTCCGAGACGGGGTaGCCGCCCAGCTCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLASSETG*PPSSPC
Trigger: ACACGGAGAGCTGGGCGGGCACCCCGTCTCGGAGCT...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCACTTCTAGGGGGATCATaGCCTCCTTGCTACCCAGCG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASLLGGS*PPCYPA
Trigger: CGCTGGGTAGCAAGGAGGGCATGATCCCCCTAGAAG...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CAGGAACACGGTGGCCACCTGAGCGCTTCCGGATCATCCCCTCCAGTCCTTTGCCGCGGGGTGGGAGGCTaGGAGGCAGCTGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: QEHGGHLSASGSSPPVLCRGVGG*EAADSE
Trigger: CTCTGAATCAGCTGCCTCCCAGCCTCCCACCCCGCG...GCAAAGGACTGGAGGGGATGATCCGGAAGCGCTCAGGTGGCCACCGTGTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGCCACCACCTGGGCTGTaGCAGGGACCCCAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRPPPGL*QGPQVR
Trigger: TCGCACCTGGGGTCCCTGTCACAGCCCAGGTGGTGG...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGCTCGGCCACAGCAGGTaGGGCCAGGAACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRLGHSR*GQEHGG
Trigger: GCCACCGTGTTCCTGGCCTCACCTGCTGTGGCCGAG...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TGTCCAGTCTCCAGTCATCTGAATGGGCCGGACGCTTCAGGTAAACCTCAGGACGTCTGGGGTGGCTGGTaGGTCTGGGCGCGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CPVSSHLNGPDASGKPQDVWGGW*VWARGG
Trigger: CCCACCCCGCGCCCAGACTCACCAGCCACCCCAGAC...GTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GGGCCAAGGTCCCAGGCCGGGGTGGGGCGTAGCTGTCATGCCGGTGCAGCTGTATGTGCAGGTAGGCATTaGGGATGGAGTTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GPRSQAGVGRSCHAGAAVCAGRH*GWSSPE
Trigger: CTCTGGAGAACTCCATCCTCAATGCCTACCTGCACA...TACAGCTGCACCGGCATGACAGCTACGCCCCACCCCGGCCTGGGACCTTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGCCCTGGACCTGGGTaGGCTCAGACCGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLGPGPG*AQTEPR
Trigger: CCTTGGCTCGGTCTGAGCTCACCCAGGTCCAGGGCC...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATCCCAGCGGCCATAGGCAAGCAGCGCTGGATGAAGTaGCGGGCAAGGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VSKVSQSVVQVIPAAIGKQRWMK*RARSRA
Trigger: GGCCCGGGACCTTGCCCGGCACTTCATCCAGCGCTG...CTTGCCTATGGCCGCTGGGATGACCTGCACTACCGACTGACTGACCTTGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAGACTGTCCGGTCATCTaGGATGAGCACCTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASDCPVI*DEHLAV
Trigger: CACAGCAAGGTGCTCATCGCAGATGACCGGACAGTC...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCACCCTTCAGGAATGCCTaGCTCCCCAGATCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASPFRNA*LPRSQR
Trigger: CCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGG...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGAGAGAGGTCTGGGGTaGCTGGTGAGTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLAERGLG*LVSLGA
Trigger: CGCGCCCAGACTCACCAGCCACCCCAGACCTCTCTC...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGCGGGCCGGTAGGCCATaGACGACCACCCCAACGTCC +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRRAGRP*TTTPTS
Trigger: GGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCG...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGGCCAAGGTCCCAGGCCGGGGTGGGGCGTAGCTGTCATGCCGGTGCAGCTGTAGCAGGTAGGGGTATGTaGGAGTCTTGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GPRSQAGVGRSCHAGAAVAGRGM*ESCTWP
Trigger: AGGCCAAGTACAAGACTCCCACATACCCCTACCTGC...TACAGCTGCACCGGCATGACAGCTACGCCCCACCCCGGCCTGGGACCTTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGCCACCACCTGGGCTGTaGCAGGGACCCCAGGTGCGA +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWPPPGL*QGPQVR
Trigger: TCGCACCTGGGGTCCCTGTCACAGCCCAGGTGGTGG...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAAACACGGTGGCCACCTaGGCGCTTCCGGATCATCCC +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLANTVAT*ALPDHP
Trigger: GGGATGATCCGGAAGCGCTCAGGTGGCCACCGTGTT...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCACCTGTGCCAGCTCAGTaGTCTCTTGGGCCCACCACC +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLAPVPAQ*SLGPTT
Trigger: GGTGGTGGGCCCAAGAGATCACTGAGCTGGCACAGG...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAAGTTCCAGCGCTGGATaGAGTGCCGGGCAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLASSSAG*SAGQGP
Trigger: GGGACCTTGCCCGGCACTTCATCCAGCGCTGGAACT...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASNRPPI*AANEEL
Trigger: CAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACGACAGGGACCCCAGGTaGGAACACCAAGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDDRDPR*EHQGVH
Trigger: GTGCACCCCTTGGTGTTCGCACCTGGGGTCCCTGTC...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTCGATCCGCACGCCGTaGCGTGCCTCCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGSIRTP*RASVLL
Trigger: AAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGA...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCATGCTGTCCCCATGGCTaGTTTAAGGCGATGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASCCPHG*FKAMQD
Trigger: ATCCTGCATCGCCTTAAAGCAGCCATGGGGACAGCA...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAATCACACCGAAGCAGTaGTTCCGCAGACTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASITPKQ*FRRLKA
Trigger: TGCCTTGAGTCTGCGGAAGCACTGCTTCGGTGTGAT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263088.11
CDS-3UTR CCA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTCGGTGCCCACCACCTaGGCTGTGACAGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPSVPTT*AVTGTP
Trigger: TGGGGTCCCTGTCACAGCCCAGGTGGTGGGCACCGA...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACTGGCTGCATGTCTGGTaGAGCCCTCAGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDWLHVW*SPQDLP
Trigger: GGGCAGGTCCTGAGGGCTCCACCAGACATGCAGCCA...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTCGCGGGGTGGGAGGCTaGGAGGCAGCTGATTCAGAG +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGRGVGG*EAADSE
Trigger: CTCTGAATCAGCTGCCTCCCAGCCTCCCACCCCGCG...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTGAGAGAGGTCTGGGGTaGCTGGTGAGTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPERGLG*LVSLGA
Trigger: CGCGCCCAGACTCACCAGCCACCCCAGACCTCTCTC...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTCCCAACGTCCCGCCATaGCATCCGAGGGGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPPNVPP*HPRGRL
Trigger: GAGACGACCCCTCGGATGCCATGGCGGGACGTTGGG...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGCCCAACGTCCCGCCATaGCATCCGAGGGGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLPNVPP*HPRGRL
Trigger: GAGACGACCCCTCGGATGCCATGGCGGGACGTTGGG...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGCGGGCCGGTAGGCCATaGACGACCACCCCAACGTCC +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQRAGRP*TTTPTS
Trigger: GGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCG...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCACCCATTCATGAGGGATaGTTCCGTCTCTGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASPIHEG*FRLCVL
Trigger: GAGGACACAGAGACGGAACCATCCCTCATGAATGGG...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACTGGACCAGGTGGCCCTaGACCTGGGTGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDWTRWP*TWVSSD
Trigger: GTCTGAGCTCACCCAGGTCCAGGGCCACCTGGTCCA...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCATGGGTAGTAGGGCCTaGGGCAGAGCCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTMGSRA*GRAPFS
Trigger: GGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCAT...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGAACACGGTGGCCACCTaGGCGCTTCCGGATCATCCC +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRNTVAT*ALPDHP
Trigger: GGGATGATCCGGAAGCGCTCAGGTGGCCACCGTGTT...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCACCAGGGTCAAAGAGCTaGACAAATGAGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASPGSKS*TNEMAP
Trigger: AGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGG...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACTGCTGTGGATGTAGATaGGCTCCGAGACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDCCGCR*APRRGA
Trigger: GGCACCCCGTCTCGGAGCTCATCTACATCCACAGCA...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGACAGGGACCCCAGGTaGGAACACCAAGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGDRDPR*EHQGVH
Trigger: GTGCACCCCTTGGTGTTCGCACCTGGGGTCCCTGTC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTCCGCACGCCGTGCCGTaGCTCCGTGCTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFPHAVP*LRAPFP
Trigger: GGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGG...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GTAGAGGAAGTGCTGGCTCTCCCTGATGGTGTGCAGGTAGGCATTGAGGATGGACCGCACGCCGTGCCGTaGCTCCGTGCTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VEEVLALPDGVQVGIEDGPHAVP*LRAPFP
Trigger: GGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGG...TCCATCCTCAATGCCTACCTGCACACCATCAGGGAGAGCCAGCACTTCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGTTGGGCCCACCACCGTaGCTGCCGGTAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQLGPPP*LPVAAA
Trigger: TGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAA...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTGCTCCTTTAAAGGCCGGTCCAGCTaGACCCAGTCCTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: RTCGRYRSARRAVPPCSFKGRSS*TQSLVI
Trigger: TATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTT...AAAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTCAGCGCTGGATGAAGTaGCGGGCAAGGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFQRWMK*RARSRA
Trigger: GGCCCGGGACCTTGCCCGGCACTTCATCCAGCGCTG...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACTGGCCTGGATGGAGTTaGCACCGCCCGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDWPGWS*HRPWRC
Trigger: ACATCTCCACGGGCGGTGGCAACTCCATCCAGGCCA...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGATCATGCCCTCCTTaGTACCCAGCGGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRGSCPP*YPAGAA
Trigger: TGCTGCCCCCGCTGGGTAGCAAGGAGGGCATGATCC...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCACGGTCCCAGGCCGGGGTaGGGCGTAGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: LSSKDGICHSSKVTCPIHGPRPG*GVAVMP
Trigger: CGGCATGACAGCTACGCCCCACCCCGGCCTGGGACC...GTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR CCA 90 bp CAGCATCAGCGCCCTCTTGCTATAGCCACTGTTGATGCCCAAGGCCAATTCCACCGGGCCGGTAGGCCATaGACGACCACCCCAACGTCC +
Preference number: 4 (lower is better)
Translates to: QHQRPLAIATVDAQGQFHRAGRP*TTTPTS
Trigger: GGACGTTGGGGTGGTCGTCCATGGCCTACCGGCCCG...GTGGAATTGGCCTTGGGCATCAACAGTGGCTATAGCAAGAGGGCGCTGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGCAGAATGGCCTGGATaGAGTTGCCACCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLAEWPG*SCHRPW
Trigger: CCACGGGCGGTGGCAACTCCATCCAGGCCATTCTGC...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGGGAACGCGTGGCATTaGATGGCAGGCAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLAGNAWH*MAGSGR
Trigger: TCTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCC...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGAGGTGGCCCTGGACCTaGGTGAGCTCAGACCGAGCC +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWRWPWT*VSSDRA
Trigger: GGCTCGGTCTGAGCTCACCCAGGTCCAGGGCCACCT...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGTGGACCAGGTGGCCCTaGACCTGGGTGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLWTRWP*TWVSSD
Trigger: GTCTGAGCTCACCCAGGTCCAGGGCCACCTGGTCCA...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGGGGAGCCAGACGTGGTaGGGCACAGCAGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWGSQTW*GTAAGD
Trigger: GTCACCAGCTGCTGTGCCCCACCACGTCTGGCTCCC...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGGCAGGGAGCCAGACGTaGTGGGGCACAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWAGSQT*WGTAAG
Trigger: ACCAGCTGCTGTGCCCCACCACGTCTGGCTCCCTGC...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CAGCATCAGCGCCCTCTTGCTATAGCCACTGTTGATGCCCAAGGCCAATTCCACCTCGGCCTCCAGCCTTaGTCCCAGGCTCCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: QHQRPLAIATVDAQGQFHLGLQP*SQAPGV
Trigger: GACGCCTGGAGCCTGGGACCAAGGCTGGAGGCCGAG...GTGGAATTGGCCTTGGGCATCAACAGTGGCTATAGCAAGAGGGCGCTGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAAAAGAGCTGAACAAATaGGATGGCACCTGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASKELNK*DGTCLE
Trigger: CTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCACAGTCTCCAGTCATCTaGATGGGCCGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLAQSPVI*MGRTLQ
Trigger: CTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTG...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGGCCCTCCTGGAAGTGTaGAGGGGAGCTGATTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQALLEV*RGADWP
Trigger: CGGCCAATCAGCTCCCCTTCACACTTCCAGGAGGGC...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACGCAAACCTGCCCGCCTaGTACTCTGCCCCATTCATG +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDANLPA*YSAPFM
Trigger: CATGAATGGGGCAGAGTATCAGGCGGGCAGGTTTGC...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263088.11
CDS-3UTR GCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGATGGCCAGAAACGGGTaGATCCGGTCGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQMARNG*IRSAGS
Trigger: GGACCCAGCCGACCGGATGCACCCGTTTCTGGCCAT...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGCGTGCCGTGCCTCCGTaGTCCTTTTCCCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRRAVPP*SFSPLA
Trigger: TGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACG...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTTCGATCCGCACGCCGTaGCGTGCCTCCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFSIRTP*RASVLL
Trigger: AAGGAGCACGGAGGCACGGCACGGCGTGCGGATCGA...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TGTCCAGTCTCCAGTCATCTGAATGGGCCGGACGCTTCAGGTAAACCTCAGGACTTGGGCCCACCACCGTaGCTGCCGGTAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CPVSSHLNGPDASGKPQDLGPPP*LPVAAA
Trigger: TGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAA...GTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR GCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGCTGTAGGAAGTCTCTaGCTGGGCCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLAVGSL*LGPVPA
Trigger: AGCTGGCACAGGGCCCAGGCAGAGACTTCCTACAGC...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACGCCCGCCTGATACTCTaGCCCATTCATGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDARLIL*PIHEGW
Trigger: CCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGC...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCCCCTGGCAGGAGCTGTaGTTCTCCTTTGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTPWQEL*FSFAAW
Trigger: CCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGG...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGCCAGTTCGTCCCCAGTaGGGAAGAGGCTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQPVRPQ*GRGSQG
Trigger: CCCCTGAGAGCCTCTTCCCCACTGGGGACGAACTGG...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGACTCCATCTGGAGCTaGCTGGAGTCCAGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLADSIWS*LESSSS
Trigger: GGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTC...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGGTGCATCCGGTCGGCTaGGTCCTCTCCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWVHPVG*VLSLLQ
Trigger: CTGAAGGAGGGAGAGGACCCAGCCGACCGGATGCAC...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCGGTGCCCACCACCTaGGCTGTGACAGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: PLELEGWHLPQQQSNLPHSVPTT*AVTGTP
Trigger: TGGGGTCCCTGTCACAGCCCAGGTGGTGGGCACCGA...ATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGTCCCAGGCCGGGGTaGGGCGTAGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKGPRPG*GVAVMP
Trigger: CGGCATGACAGCTACGCCCCACCCCGGCCTGGGACC...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCCCAACGTCCCGCCATaGCATCCGAGGGGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SPLELEGWHLPQQQSNLPPNVPP*HPRGRL
Trigger: GAGACGACCCCTCGGATGCCATGGCGGGACGTTGGG...GGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGGCAGAATGGCCTGGATaGAGTTGCCACCGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQAEWPG*SCHRPW
Trigger: CCACGGGCGGTGGCAACTCCATCCAGGCCATTCTGC...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGAACGCGTGGCATTaGATGGCAGGCAGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLGNAWH*MAGSGR
Trigger: TCTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCC...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGAACTTGAGGGGGAAGTaGACCAGGTGGCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLNLRGK*TRWPWT
Trigger: GGTCCAGGGCCACCTGGTCCACTTCCCCCTCAAGTT...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CAGCATCAGCGCCCTCTTGCTATAGCCACTGTTGATGCCCAAGGCCAATTCCACAACACGGTGGCCACCTaGGCGCTTCCGGATCATCCC +
Preference number: 4 (lower is better)
Translates to: QHQRPLAIATVDAQGQFHNTVAT*ALPDHP
Trigger: GGGATGATCCGGAAGCGCTCAGGTGGCCACCGTGTT...GTGGAATTGGCCTTGGGCATCAACAGTGGCTATAGCAAGAGGGCGCTGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTCTCGGCCACAGCAGGTaGGGCCAGGAACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVLGHSR*GQEHGG
Trigger: GCCACCGTGTTCCTGGCCTCACCTGCTGTGGCCGAG...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGGTAGCTGCTGCACTTaGGAATCAAGGACCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLAGSCCT*ESRTCG
Trigger: CCCACAGGTCCTTGATTCTCAAGTGCAGCAGCTACC...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTCCTGTGCCAGCTCAGTaGTCTCTTGGGCCCACCACC +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFPVPAQ*SLGPTT
Trigger: GGTGGTGGGCCCAAGAGATCACTGAGCTGGCACAGG...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATCCTGTGCCAGCTCAGTaGTCTCTTGGGCCCACCACC +
Preference number: 4 (lower is better)
Translates to: PLELEGWHLPQQQSNLPHPVPAQ*SLGPTT
Trigger: GGTGGTGGGCCCAAGAGATCACTGAGCTGGCACAGG...ATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR TCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGCAGTCTCCAGTCATCTaGATGGGCCGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRQSPVI*MGRTLQ
Trigger: CTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTG...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGAGGCTGGGAGGCAGCTaGTTCAGAGGAGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRRLGGS*FRGVSK
Trigger: CTTGGAGACTCCTCTGAATCAGCTGCCTCCCAGCCT...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATCCCAGCGGCCATAGGCAAGAGGCTGGGAGGCAGCTaGTTCAGAGGAGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VSKVSQSVVQVIPAAIGKRLGGS*FRGVSK
Trigger: CTTGGAGACTCCTCTGAATCAGCTGCCTCCCAGCCT...CTTGCCTATGGCCGCTGGGATGACCTGCACTACCGACTGACTGACCTTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGAGTGTGAAGGGGAGCTaGTTGGCCGTGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRSVKGS*LAVLVD
Trigger: GTCTACCAGCACGGCCAATCAGCTCCCCTTCACACT...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGAGTGCTGGCTCTCCCTaGTGGTGTGCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRSAGSP*WCAGRH
Trigger: ATGCCTACCTGCACACCATCAGGGAGAGCCAGCACT...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGAGGGCATCTCTCTGTTaGCTGCATCTCGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLRASLC*LHLGLE
Trigger: CTCCAGCCCGAGATGCAGGCAACAGAGAGATGCCCT...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCGCACGCCGTGCCGTaGCTCCGTGCTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPPHAVP*LRAPFP
Trigger: GGGAAAAGGAGCACGGAGGCACGGCACGGCGTGCGG...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCTGTACGGTGGTGCACTaGCCTCCTGGAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTCTVVH*PPGSVK
Trigger: CTTCACACTTCCAGGAGGGCAGTGCACCACCGTACA...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGTGGCCTGGATGGAGTTaGCACCGCCCGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWWPGWS*HRPWRC
Trigger: ACATCTCCACGGGCGGTGGCAACTCCATCCAGGCCA...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGACTGTCCGGTCATCTaGGATGAGCACCTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLADCPVI*DEHLAV
Trigger: CACAGCAAGGTGCTCATCGCAGATGACCGGACAGTC...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCTGGAGGGAGTTAATGTaGCCTCCTTCCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTWRELM*PPSFPW
Trigger: CCAGGGGAAGGAAGGAGGGCACATTAACTCCCTCCA...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGCCATCTGGAGCTGGCTaGAGTCCAGTTCGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQPSGAG*SPVRPQ
Trigger: CTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGG...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCATCATCGGACTCCATCTaGAGCTGGCTGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLASSDSI*SWLESS
Trigger: ACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATGA...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGTGCATCCGGTCGGCTaGGTCCTCTCCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFVHPVG*VLSLLQ
Trigger: CTGAAGGAGGGAGAGGACCCAGCCGACCGGATGCAC...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAAGGCCAGGAACACGGTaGCCACCTGAGCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRARPGTR*PPERFR
Trigger: CCGGAAGCGCTCAGGTGGCCACCGTGTTCCTGGCCT...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGAGCTCAGTGATCTCTTaGGCCCACCACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTSSVIS*AHHRAC
Trigger: GCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCT...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp TCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTGAATGGGCCGGAGAGAGAGGTCTGGGGTaGCTGGTGAGTCTGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SAFLLSIMSSLQSSEWAGERGLG*LVSLGA
Trigger: CGCGCCCAGACTCACCAGCCACCCCAGACCTCTCTC...TCCGGCCCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGCAAGACCTGTACGGTaGTGCACTGCCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGARPVR*CTALLE
Trigger: TTCCAGGAGGGCAGTGCACCACCGTACAGGTCTTGC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACCACCACCCCTGTTTGTaGGCCTTCAGGATTCTGTCC +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDHHPCL*AFRILS
Trigger: GGACAGAATCCTGAAGGCCCACAAACAGGGGTGGTG...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGACCAGGAGCTTCTCATaGTGGGCCCACAACGTCACT +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLTRSFS*WAHNVT
Trigger: AGTGACGTTGTGGGCCCATCATGAGAAGCTCCTGGT...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGAGTGTGAAGGGGAGCTaGTTGGCCGTGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQSVKGS*LAVLVD
Trigger: GTCTACCAGCACGGCCAATCAGCTCCCCTTCACACT...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGAGTGTGAAGGGGAGCTaGTTGGCCGTGCTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTSVKGS*LAVLVD
Trigger: GTCTACCAGCACGGCCAATCAGCTCCCCTTCACACT...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCATGTGCAGGTAGGCATTaGGGATGGAGTTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLACAGRH*GWSSPE
Trigger: CTCTGGAGAACTCCATCCTCAATGCCTACCTGCACA...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGATCACACTGCCCGCCTaGTACTCTGCCCCATTCATG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLITLPA*YSAPFM
Trigger: CATGAATGGGGCAGAGTATCAGGCGGGCAGTGTGAT...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS-3UTR GCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGTTGGGCCCACCACCGTaGCTGCCGGTAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKLGPPP*LPVAAA
Trigger: TGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAA...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCAGTCTGTGATGAAAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCTTGGGCCCACCACCGTaGCTGCCGGTAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVCDENLLLSSKDGICHSLGPPP*LPVAAA
Trigger: TGCAGCAGCTACCGGCAGGCACGGTGGTGGGCCCAA...GCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATCACAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR GCA 90 bp CCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATGCTGTAGGAAGTCTCTaGCTGGGCCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLELEGWHLPQQQSNLPHAVGSL*LGPVPA
Trigger: AGCTGGCACAGGGCCCAGGCAGAGACTTCCTACAGC...ATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR GCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGAAAGGCCGGTCCAGCTaGACCCAGTCCTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLKGRSS*TQSLVI
Trigger: TATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTT...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTCCCTTCAGGAATGCCTaGCTCCCCAGATCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGPFRNA*LPRSQR
Trigger: CCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGG...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACGCCCAGGGTTGGGAGTaGCCTTTTCAGCTATTTCTC +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDAQGWE*PFQLFL
Trigger: GAGAAATAGCTGAAAAGGGCACTCCCAACCCTGGGC...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGCCCTGGCAGGAGCTGTaGTTCTCCTTTGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWPWQEL*FSFAAW
Trigger: CCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGG...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AGGCAGCTGATTCAGAGGAGTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATCAGGCTCCAGGCGTCTaGTTCTGCTCCACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RQLIQRSLQGQSVGSAGHQAPGV*FCSTSP
Trigger: AGGGCTGGTGGAGCAGAAGCAGACGCCTGGAGCCTG...ATGACCTGCACTACCGACTGACTGACCTTGGAGACTCCTCTGAATCAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGGACTCCATCTGGAGCTaGCTGGAGTCCAGTTCGTCC +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWDSIWS*LESSSS
Trigger: GGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTC...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACCCACCTTGGATCCGCTaGTATATCTTTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDPPWIR*YIFRCP
Trigger: TGGGCACCGAAAGATATACCAGCGGATCCAAGGTGG...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGCCTGCATCTCGGGCTaGAGAATAGGCAACGGCAAA +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRACISG*RIGNGK
Trigger: TTTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGC...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGAGGCCAGGAACACGGTaGCCACCTGAGCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKRPGTR*PPERFR
Trigger: CCGGAAGCGCTCAGGTGGCCACCGTGTTCCTGGCCT...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AATGAAATCTTCGAAAGGCCGGTCCAGCTGCACCCAGTCCTTGGTGATAAGATTGGTCCCAGGCCGGGGTaGGGCGTAGCTGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: NEIFERPVQLHPVLGDKIGPRPG*GVAVMP
Trigger: CGGCATGACAGCTACGCCCCACCCCGGCCTGGGACC...AATCTTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAAGATTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACGCATCACCTTTATGTTaGGGTGCAGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDASPLC*GAAASA
Trigger: CGCTGATGCTGCTGCACCCCAACATAAAGGTGATGC...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACAGGAATGCTACCACTTaGTCCACCACCAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDRNATT*STTRSF
Trigger: GAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCCT...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACGCAGGTAGGGGTATGTaGGAGTCTTGTACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDAGRGM*ESCTWP
Trigger: AGGCCAAGTACAAGACTCCCACATACCCCTACCTGC...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTCACCACCCCTGTTTGTaGGCCTTCAGGATTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGHHPCL*AFRILS
Trigger: GGACAGAATCCTGAAGGCCCACAAACAGGGGTGGTG...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGACGCGTGGCATTGGATaGCAGGCAGCGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWTRGIG*QAAEDL
Trigger: CAGATCTTCCGCTGCCTGCCATCCAATGCCACGCGT...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTGCAGGGAGCCAGACGTaGTGGGGCACAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPAGSQT*WGTAAG
Trigger: ACCAGCTGCTGTGCCCCACCACGTCTGGCTCCCTGC...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAATGGGTAGTAGGGCCTaGGGCAGAGCCCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRAMGSRA*GRAPFS
Trigger: GGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCAT...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTCTGTCAGCAGGCTGGTaGAGGGAGTTAATGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGLSAGW*RELMCP
Trigger: AGGGCACATTAACTCCCTCCACCAGCCTGCTGACAG...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGCTGTCAGCAGGCTGGTaGAGGGAGTTAATGTGCCCT +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRLSAGW*RELMCP
Trigger: AGGGCACATTAACTCCCTCCACCAGCCTGCTGACAG...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
3UTR CAA 72 bp CACGCCGTGCCGTGCCTCCGTGCTCCTTTTCCCCACTaGCACCTCAAAGCCAGGGTCAAAGAGCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: HAVPCLRAPFPH*HLKARVKELNK
Trigger: TTTGTTCAGCTCTTTGACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTCAGGAAAAGTCGCCGTaGGTCAAGCGGACAGAATAC +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGQEKSP*VKRTEY
Trigger: GTATTCTGTCCGCTTGACTCACGGCGACTTTTCCTG...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTCTCGGCCACAGCAGGTaGGGCCAGGAACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSLGHSR*GQEHGG
Trigger: GCCACCGTGTTCCTGGCCTCACCTGCTGTGGCCGAG...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CTCTGTTGCCTGCATCTCGGGCTGGAGAATAGGCAACGGCAAATCTGCCCTCTACAGTCTCCAGTCATCTaGATGGGCCGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCCLHLGLENRQRQICPLQSPVI*MGRTLQ
Trigger: CTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTG...TAGAGGGCAGATTTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGCAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCATGCTATAGCCACTGTTaGTGCCCAAGGCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLACYSHC*CPRPIP
Trigger: TGGAATTGGCCTTGGGCATCAACAGTGGCTATAGCA...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCGTCACTTGGTCTGGGTaGCGCATCACCTTTATGTTG +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTVTWSG*RITFML
Trigger: CAACATAAAGGTGATGCGTCACCCAGACCAAGTGAC...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGACCAGGAGCTTCTCATaGTGGGCCCACAACGTCACT +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWTRSFS*WAHNVT
Trigger: AGTGACGTTGTGGGCCCATCATGAGAAGCTCCTGGT...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTCAGAAGAATTGGTTGTaGGAGAGGTCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPQKNWL*ERSGVA
Trigger: AGCCACCCCAGACCTCTCTCACAACCAATTCTTCTG...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTGCCCTCCTGGAAGTGTaGAGGGGAGCTGATTGGCCG +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPALLEV*RGADWP
Trigger: CGGCCAATCAGCTCCCCTTCACACTTCCAGGAGGGC...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGAAGGCGATGCAGGATTaGATACTCCCCACGACACAG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLKAMQD*ILPTTQ
Trigger: CTGTGTCGTGGGGAGTATTCAATCCTGCATCGCCTT...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTGGGCACAGCAGCTGGTaGCCTCTCCCTGACGGGGGC +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLGHSSW*PLPDGG
Trigger: GCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCC...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCACCACCAGCCACCTCTTGGACCAGCGATAACAAACTTGGTCTCGGCCACAGCTCCACCAGCCCTCAATaGCTGACTCCACTCATTCCC +
Preference number: 4 (lower is better)
Translates to: SPPATSWTSDNKLGLGHSSTSPQ*LTPLIP
Trigger: GGGAATGAGTGGAGTCAGTCATTGAGGGCTGGTGGA...GCTGTGGCCGAGACCAAGTTTGTTATCGCTGGTCCAAGAGGTGGCTGGTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCCCAGGTATTTCTGTTTaGTGGCTGCATGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTPGISV*WLHVWW
Trigger: CCACCAGACATGCAGCCAGCAAACAGAAATACCTGG...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCACCAGGTATTTCTGTTTaGTGGCTGCATGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLAPGISV*WLHVWW
Trigger: CCACCAGACATGCAGCCAGCAAACAGAAATACCTGG...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCAGCAGCAAAGTAACCTaGCCCATTCACAAACCACCG +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTSSKVT*PIHKPP
Trigger: CGGTGGTTTGTGAATGGGGCAGGTTACTTTGCTGCT...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCATCGAAGGATGGCATCTaGCACAGCAGCAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLASKDGI*HSSKVT
Trigger: GGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGA...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTCAGCGCTGGATGAAGTaGCGGGCAAGGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSQRWMK*RARSRA
Trigger: GGCCCGGGACCTTGCCCGGCACTTCATCCAGCGCTG...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGTCATCGGACTCCATCTaGAGCTGGCTGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTSSDSI*SWLESS
Trigger: ACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATGA...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTGTGCATCCGGTCGGCTaGGTCCTCTCCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVVHPVG*VLSLLQ
Trigger: CTGAAGGAGGGAGAGGACCCAGCCGACCGGATGCAC...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGCCACCTTGGATCCGCTaGTATATCTTTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLPPWIR*YIFRCP
Trigger: TGGGCACCGAAAGATATACCAGCGGATCCAAGGTGG...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AGAATCAAGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTGTGCAGGTTCCCACCTTaGATCCGCTGGTATATCTTT +
Preference number: 4 (lower is better)
Translates to: RIKDLWEVSIRTPCRASVCRFPP*IRWYIF
Trigger: AAAGATATACCAGCGGATCCAAGGTGGGAACCTGCA...CACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCTTGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGGCCTGCATCTCGGGCTaGAGAATAGGCAACGGCAAA +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQACISG*RIGNGK
Trigger: TTTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGC...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTTGGCTGCATGTCTGGTaGAGCCCTCAGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPWLHVW*SPQDLP
Trigger: GGGCAGGTCCTGAGGGCTCCACCAGACATGCAGCCA...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGCTTGAGCTCGAAGGATaGCATCTGCCACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLLELEG*HLPQQQ
Trigger: TTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAG...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGCATCACCTTTATGTTaGGGTGCAGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGASPLC*GAAASA
Trigger: CGCTGATGCTGCTGCACCCCAACATAAAGGTGATGC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AGAATCAAGGACCTGTGGGAGGTATCGATCCGCACGCCGTGCCGTGCCTCCGTGCAACGTCACTTGGTCTaGGTGACGCATCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: RIKDLWEVSIRTPCRASVQRHLV*VTHHLY
Trigger: ATAAAGGTGATGCGTCACCCAGACCAAGTGACGTTG...CACGGAGGCACGGCACGGCGTGCGGATCGATACCTCCCACAGGTCCTTGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp ATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGCCCATTCATGAGGGATaGTTCCGTCTCTGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: MPASPDLKGHCPQSLGLRPIHEG*FRLCVL
Trigger: GAGGACACAGAGACGGAACCATCCCTCATGAATGGG...CCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPSEIQV*PGICSK
Trigger: CTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGA...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGTCCGCAGGGAACGCGTaGCATTGGATGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKSAGNA*HWMAGS
Trigger: GCTGCCTGCCATCCAATGCCACGCGTTCCCTGCGGA...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTTCCGCAGGGAACGCGTaGCATTGGATGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPSAGNA*HWMAGS
Trigger: GCTGCCTGCCATCCAATGCCACGCGTTCCCTGCGGA...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTAGAGCCCCCTTCTCCTaGAATAAGAGGCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPRAPFS*NKRLDP
Trigger: AGGGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCT...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTGTCTGTCAGCAGGCTaGTGGAGGGAGTTAATGTGC +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGCLSAG*WRELMC
Trigger: GCACATTAACTCCCTCCACCAGCCTGCTGACAGACA...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGTGCTATAGCCACTGTTaGTGCCCAAGGCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLCYSHC*CPRPIP
Trigger: TGGAATTGGCCTTGGGCATCAACAGTGGCTATAGCA...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGTCACTTGGTCTGGGTaGCGCATCACCTTTATGTTG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLVTWSG*RITFML
Trigger: CAACATAAAGGTGATGCGTCACCCAGACCAAGTGAC...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TGTCCAGTCTCCAGTCATCTGAATGGGCCGGACGCTTCAGGTAAACCTCAGGACACCAGGAGCTTCTCATaGTGGGCCCACAACGTCACT +
Preference number: 4 (lower is better)
Translates to: CPVSSHLNGPDASGKPQDTRSFS*WAHNVT
Trigger: AGTGACGTTGTGGGCCCATCATGAGAAGCTCCTGGT...GTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCAGTTCCAGCGCTGGATaGAGTGCCGGGCAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PKANSTSLNSRIDTRTPSSSSAG*SAGQGP
Trigger: GGGACCTTGCCCGGCACTTCATCCAGCGCTGGAACT...GGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCGCCCTCCTGGAAGTGTaGAGGGGAGCTGATTGGCCG +
Preference number: 4 (lower is better)
Translates to: PKANSTSLNSRIDTRTPSALLEV*RGADWP
Trigger: CGGCCAATCAGCTCCCCTTCACACTTCCAGGAGGGC...GGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGTGTGCAGGTAGGCATTaGGGATGGAGTTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWCAGRH*GWSSPE
Trigger: CTCTGGAGAACTCCATCCTCAATGCCTACCTGCACA...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGAAGGCGATGCAGGATTaGATACTCCCCACGACACAG +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWKAMQD*ILPTTQ
Trigger: CTGTGTCGTGGGGAGTATTCAATCCTGCATCGCCTT...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGCTGGTGACCTCTCCCTaGCGGGGGCCTCAACTATGT +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKLVTSP*RGPQLC
Trigger: ACATAGTTGAGGCCCCCGTCAGGGAGAGGTCACCAG...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCATCCCCTGGTGGGGGCTaGAGCCAGAAGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRASPGGG*SQKWLY
Trigger: ATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGA...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CACCCAGTCCTTGGTGATAAGATTGCTGTAGTCCTTGCCCAGCCAGAAGAATTGATGGCCAGAAACGGGTaGATCCGGTCGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HPVLGDKIAVVLAQPEELMARNG*IRSAGS
Trigger: GGACCCAGCCGACCGGATGCACCCGTTTCTGGCCAT...CAATTCTTCTGGCTGGGCAAGGACTACAGCAATCTTATCACCAAGGACTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGCTGTAGGAAGTCTCTaGCTGGGCCCTGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKAVGSL*LGPVPA
Trigger: AGCTGGCACAGGGCCCAGGCAGAGACTTCCTACAGC...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTTGTACGGTGGTGCACTaGCCTCCTGGAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFCTVVH*PPGSVK
Trigger: CTTCACACTTCCAGGAGGGCAGTGCACCACCGTACA...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCACAGACCTGTACGGTGGTaGACTGCCCTCCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LSSKDGICHSSKVTCPIHRPVRW*TALLEV
Trigger: CACTTCCAGGAGGGCAGTGCACCACCGTACAGGTCT...GTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTAATATAGTCCCGCCATaGTGTCCCCATGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPNIVPP*CPHGCF
Trigger: AAAGCAGCCATGGGGACAGCATGGCGGGACTATATT...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTAGCTCCGAGACGGGGTaGCCGCCCAGCTCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSSETG*PPSSPC
Trigger: ACACGGAGAGCTGGGCGGGCACCCCGTCTCGGAGCT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAGCCCGCCTGATACTCTaGCCCATTCATGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRAARLIL*PIHEGW
Trigger: CCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGC...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAGACTCAAGGCAAACCTaGCCGCCTGATACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRADSRQT*PPDTLP
Trigger: GGGCAGAGTATCAGGCGGGCAGGTTTGCCTTGAGTC...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263088.11
CDS-3UTR GCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGTCTGGCCGGGTATTTaGTCCAAGAATCACACCGAA +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGVWPGI*SKNHTE
Trigger: TTCGGTGTGATTCTTGGAGCAAATACCCGGCCAGAC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263088.11
CDS-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCCTCTCAGCCATGTCTTaGCACAACTGGAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTLSAMS*HNWKKS
Trigger: TGACTTCTTCCAGTTGTGGCAAGACATGGCTGAGAG...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACCTCTCAGCCATGTCTTaGCACAACTGGAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDLSAMS*HNWKKS
Trigger: TGACTTCTTCCAGTTGTGGCAAGACATGGCTGAGAG...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCCATAGATATTGGCGTTaGTCTCAGCCATGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTHRYWR*SQPCLA
Trigger: GGCAAGACATGGCTGAGAGCAACGCCAATATCTATG...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTTCTAGGGGGATCATaGCCTCCTTGCTACCCAGCG +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRALLGGS*PPCYPA
Trigger: CGCTGGGTAGCAAGGAGGGCATGATCCCCCTAGAAG...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGGTCTGGCCGGGTATTTaGTCCAAGAATCACACTGCC +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQVWPGI*SKNHTA
Trigger: GGCAGTGTGATTCTTGGAGCAAATACCCGGCCAGAC...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCATGCAGGTTCCCACCTTaGATCCGCTGGTATATCTTT +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLACRFPP*IRWYIF
Trigger: AAAGATATACCAGCGGATCCAAGGTGGGAACCTGCA...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCACCAGGAACTCTGTCATaGCATGGTAGTTGCGATAGA +
Preference number: 4 (lower is better)
Translates to: PLVGAEARSGFILPSTLAPGTLS*HGSCDR
Trigger: TCTATCGCAACTACCATGCCATGACAGAGTTCCTGG...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AATGAAATCTTCGAAAGGCCGGTCCAGCTGCACCCAGTCCTTGGTGATAAGATTAGGCCAGGAACACGGTaGCCACCTGAGCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: NEIFERPVQLHPVLGDKIRPGTR*PPERFR
Trigger: CCGGAAGCGCTCAGGTGGCCACCGTGTTCCTGGCCT...AATCTTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAAGATTTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTCCACCAGCCACCTCTTaGACCAGCGATAACAAACTT +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGPPATS*TSDNKL
Trigger: AAGTTTGTTATCGCTGGTCCAAGAGGTGGCTGGTGG...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGCTGAACAAATGAGATaGCACCTGTCTCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLAEQMR*HLSRGT
Trigger: TGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGC...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTAGCTCAGTGATCTCTTaGGCCCACCACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPSSVIS*AHHRAC
Trigger: GCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCT...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCCAACGTCACTTGGTCTaGGTGACGCATCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTQRHLV*VTHHLY
Trigger: ATAAAGGTGATGCGTCACCCAGACCAAGTGACGTTG...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACCAACGTCACTTGGTCTaGGTGACGCATCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDQRHLV*VTHHLY
Trigger: ATAAAGGTGATGCGTCACCCAGACCAAGTGACGTTG...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTCCTCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTGAATGGGCAAGACCTGTACGGTaGTGCACTGCCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PSSAFLLSIMSSLQSSEWARPVR*CTALLE
Trigger: TTCCAGGAGGGCAGTGCACCACCGTACAGGTCTTGC...CCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGTACGAAGCCCGCAGATaGAAATATAGTCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLYEARR*KYSPAM
Trigger: CATGGCGGGACTATATTTCCATCTGCGGGCTTCGTA...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCAGAAGTCATCACAGATaGGGTCTCGGAGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTRSHHR*GLGDPS
Trigger: ACTTGGATCTCCGAGACCCCATCTGTGATGACTTCT...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGAGAGCCCCCTTCTCCTaGAATAAGAGGCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWRAPFS*NKRLDP
Trigger: AGGGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCT...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCCAGACATCAGCAGCCTaGCCCCTGGCCCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KANSTSLNSRIDTRTPSSQTSAA*PLALSS
Trigger: CGAGGACAGGGCCAGGGGCCAGGCTGCTGATGTCTG...GGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CAA 72 bp CACCAGGAGCTTCTCATGATGGGCCCACAACGTCACTaGGTCTGGGTGACGCATCACCTTTATGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: HQELLMMGPQRH*VWVTHHLYVGV
Trigger: CACCCCAACATAAAGGTGATGCGTCACCCAGACCAAGTGACGTTGTGGGCCCATCATGAGAAGCTCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGCCAGGGTCAAAGAGCTaGACAAATGAGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWPGSKS*TNEMAP
Trigger: AGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGG...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCAGCGCTGGATaGAGTGCCGGGCAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSSSSAG*SAGQGP
Trigger: GGGACCTTGCCCGGCACTTCATCCAGCGCTGGAACT...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTAGTGCTGGCTCTCCCTaGTGGTGTGCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPSAGSP*WCAGRH
Trigger: ATGCCTACCTGCACACCATCAGGGAGAGCCAGCACT...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCATCCGGTCATCTGCGATaGGCACCTTGCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRASGHLR*APCCGC
Trigger: ACATCCACAGCAAGGTGCTCATCGCAGATGACCGGA...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCAGTCTGTGATGAAAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGGGCATCTCTCTGTTaGCTGCATCTCGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PVCDENLLLSSKDGICHSRASLC*LHLGLE
Trigger: CTCCAGCCCGAGATGCAGGCAACAGAGAGATGCCCT...GCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATCACAGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGCCAGGTATTTCTGTTTaGTGGCTGCATGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTPGISV*WLHVWW
Trigger: CCACCAGACATGCAGCCAGCAAACAGAAATACCTGG...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp AAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCGTGCCGTGCCTCCGTaGTCCTTTTCCCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: KSPLELEGWHLPQQQSNLRAVPP*SFSPLA
Trigger: TGCAAGTGGGGAAAAGGAGCACGGAGGCACGGCACG...CAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAACCTTTATGTTGGGGTaGAGCAGCATCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRATFMLG*SSISAL
Trigger: GAGGGCGCTGATGCTGCTGCACCCCAACATAAAGGT...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGATTGCTGTAGTCCTTaGCCAGCCAGAAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGDCCSP*PARRIG
Trigger: ACCAATTCTTCTGGCTGGGCAAGGACTACAGCAATC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGAGACCTGTACGGTGGTaGACTGCCCTCCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKRPVRW*TALLEV
Trigger: CACTTCCAGGAGGGCAGTGCACCACCGTACAGGTCT...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGGCTGCTTTAAGGCGATaGAGGATTGAATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLAALRR*RIEYSP
Trigger: TGGGGAGTATTCAATCCTGCATCGCCTTAAAGCAGC...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGCTGCTTTAAGGCGATaGAGGATTGAATACTCCCCA +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGAALRR*RIEYSP
Trigger: TGGGGAGTATTCAATCCTGCATCGCCTTAAAGCAGC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGAATATAGTCCCGCCATaGTGTCCCCATGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQNIVPP*CPHGCF
Trigger: AAAGCAGCCATGGGGACAGCATGGCGGGACTATATT...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTCCAGTTCGTCCCCAGTaGGGAAGAGGCTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSPVRPQ*GRGSQG
Trigger: CCCCTGAGAGCCTCTTCCCCACTGGGGACGAACTGG...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGTGCAGGTTCCCACCTTaGATCCGCTGGTATATCTTT +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLCRFPP*IRWYIF
Trigger: AAAGATATACCAGCGGATCCAAGGTGGGAACCTGCA...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGCCACCAGCCACCTCTTaGACCAGCGATAACAAACTT +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWPPATS*TSDNKL
Trigger: AAGTTTGTTATCGCTGGTCCAAGAGGTGGCTGGTGG...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCCCAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCAGCTCAGTGATCTCTTaGGCCCACCACCGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AQGQFHFFKQQNRHTDTLSSVIS*AHHRAC
Trigger: GCAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCT...GAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR CCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTAGGAATGCTACCACTTaGTCCACCACCAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFRNATT*STTRSF
Trigger: GAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCCT...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CTCTGTTGCCTGCATCTCGGGCTGGAGAATAGGCAACGGCAAATCTGCCCTCTAAGGAATGCTACCACTTaGTCCACCACCAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LCCLHLGLENRQRQICPLRNATT*STTRSF
Trigger: GAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCCT...TAGAGGGCAGATTTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGCAACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGTACGAAGCCCGCAGATaGAAATATAGTCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWYEARR*KYSPAM
Trigger: CATGGCGGGACTATATTTCCATCTGCGGGCTTCGTA...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTAGAAGTCATCACAGATaGGGTCTCGGAGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGRSHHR*GLGDPS
Trigger: ACTTGGATCTCCGAGACCCCATCTGTGATGACTTCT...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GATCTCAAAGGGCACTGCCCTCAGTCCTTGGGGTTAAGGGGCAGGGAGCCAGACTCTGCTCATAGATATTaGCGTTGCTCTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: DLKGHCPQSLGLRGREPDSAHRY*RCSQPC
Trigger: ACATGGCTGAGAGCAACGCCAATATCTATGAGCAGA...GTCTGGCTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGACGCGTGGCATTGGATaGCAGGCAGCGGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKTRGIG*QAAEDL
Trigger: CAGATCTTCCGCTGCCTGCCATCCAATGCCACGCGT...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTGGGAGCCAGACGTGGTaGGGCACAGCAGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLGSQTW*GTAAGD
Trigger: GTCACCAGCTGCTGTGCCCCACCACGTCTGGCTCCC...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCCACCTTGGCAGCAATaGGCTGGGAGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLPPWQQ*AGRALG
Trigger: TCCCAGGGCCCTCCCAGCCCATTGCTGCCAAGGTGG...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTTGTCTGTCAGCAGGCTaGTGGAGGGAGTTAATGTGC +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFCLSAG*WRELMC
Trigger: GCACATTAACTCCCTCCACCAGCCTGCTGACAGACA...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCCCCAGGTCTCTCTCCTaGGACACCCCTTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: PKANSTSLNSRIDTRTPSPRSLS*DTPSML
Trigger: GAGCATGGAAGGGGTGTCCCAGGAGAGAGACCTGGG...GGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575246.6
3UTR CAA 72 bp GCCTTCAGGATTCTGTCCACAATCTCATCGCCCACCTaGTTCAGAACCGTCCGCCCATCTGAGCAGCTAATG +
Preference number: 4 (lower is better)
Translates to: AFRILSTISSPT*FRTVRPSEQLM
Trigger: CATTAGCTGCTCAGATGGGCGGACGGTTCTGAACAAGGTGGGCGATGAGATTGTGGACAGAATCCTGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACAGGAAAAGTCGCCGTaGGTCAAGCGGACAGAATAC +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRAQEKSP*VKRTEY
Trigger: GTATTCTGTCCGCTTGACTCACGGCGACTTTTCCTG...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCCAGTCATCTGAATGGGCCGGACGCTTCAGGTAAACCTCAGGACTCAACCACCGGGATAAAGGACAGCTaGCTGACTTCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: SSHLNGPDASGKPQDSTTGIKDS*LTSRNS
Trigger: AGAGTTCCTGGAAGTCAGTCAGCTGTCCTTTATCCC...GGTGGTTGAGTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTATGAAAATCTCCTCTTaGGCTCGAAGGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGMKISS*ARRMAS
Trigger: AGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCAT...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp AAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCAGTCTCCAGTCATCTaGATGGGCCGGACGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KSPLELEGWHLPQQQSNLQSPVI*MGRTLQ
Trigger: CTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTG...CAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR TCA 90 bp GTAGAGGAAGTGCTGGCTCTCCCTGATGGTGTGCAGGTAGGCATTGAGGATGGATGCTATAGCCACTGTTaGTGCCCAAGGCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: VEEVLALPDGVQVGIEDGCYSHC*CPRPIP
Trigger: TGGAATTGGCCTTGGGCATCAACAGTGGCTATAGCA...TCCATCCTCAATGCCTACCTGCACACCATCAGGGAGAGCCAGCACTTCCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATGTCACTTGGTCTGGGTaGCGCATCACCTTTATGTTG +
Preference number: 4 (lower is better)
Translates to: PLELEGWHLPQQQSNLPHVTWSG*RITFML
Trigger: CAACATAAAGGTGATGCGTCACCCAGACCAAGTGAC...ATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRANRPPI*AANEEL
Trigger: CAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTT...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTTCCGGTCATCTGCGATaGGCACCTTGCTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPSGHLR*APCCGC
Trigger: ACATCCACAGCAAGGTGCTCATCGCAGATGACCGGA...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATCTCTCTGTTGCCTaGATCTCGGGCTGGAGAATA +
Preference number: 4 (lower is better)
Translates to: SPLELEGWHLPQQQSNLPHLSVA*ISGWRI
Trigger: TATTCTCCAGCCCGAGATGCAGGCAACAGAGAGATG...GGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTACCTTTATGTTGGGGTaGAGCAGCATCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVTFMLG*SSISAL
Trigger: GAGGGCGCTGATGCTGCTGCACCCCAACATAAAGGT...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGAAAGGCCGGTCCAGCTaGACCCAGTCCTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKKGRSS*TQSLVI
Trigger: TATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTT...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTCCATCTGGAGCTGGCTaGAGTCCAGTTCGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSPSGAG*SPVRPQ
Trigger: CTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGG...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGCCAGGAACTCTGTCATaGCATGGTAGTTGCGATAGA +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQPGTLS*HGSCDR
Trigger: TCTATCGCAACTACCATGCCATGACAGAGTTCCTGG...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTGCCACCGCCCGTaGAGATGTCACCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSSCHRP*RCHPRS
Trigger: GCTTCGAGGGTGACATCTCCACGGGCGGTGGCAACT...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCATCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRASEIQV*PGICSK
Trigger: CTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGA...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCGCCTTCCCCATTCACAAACCTaGGGGGAGGCCAAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: QFHFFKQQNRHTDTLLRLPHSQT*GEAKPR
Trigger: CCTTGGCTTGGCCTCCCCCCAGGTTTGTGAATGGGG...AAGGCGGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575813.5
CDS-3UTR TCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGTGGTCAAGAGACGGTTaGGGTAATTCTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWWSRDG*GNSPGI
Trigger: AATACCTGGAGAATTACCTCAACCGTCTCTTGACCA...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAGGGATAAAGGACAGCTaGCTGACTTCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRAGIKDS*LTSRNS
Trigger: AGAGTTCCTGGAAGTCAGTCAGCTGTCCTTTATCCC...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCACAAACCCCAGGGTCAAAGAGCTaGACAAATGAGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: LEGWHLPQQQSNLPHSQTPGSKS*TNEMAP
Trigger: AGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGG...GGTTTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGATGAAAATCTCCTCTTaGGCTCGAAGGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQMKISS*ARRMAS
Trigger: AGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCAT...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCAGAAGAATTGGTTGTaGGAGAGGTCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPQKNWL*ERSGVA
Trigger: AGCCACCCCAGACCTCTCTCACAACCAATTCTTCTG...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTTGCTGTGGATGTAGATaGGCTCCGAGACGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLCCGCR*APRRGA
Trigger: GGCACCCCGTCTCGGAGCTCATCTACATCCACAGCA...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCTGGTGACCTCTCCCTaGCGGGGGCCTCAACTATGT +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLLVTSP*RGPQLC
Trigger: ACATAGTTGAGGCCCCCGTCAGGGAGAGGTCACCAG...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCACAAACCTCGAAGGATGGCATCTaGCACAGCAGCAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: LEGWHLPQQQSNLPHSQTSKDGI*HSSKVT
Trigger: GGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGA...GGTTTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR GCA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGTGCTGTCCCCATGGCTaGTTTAAGGCGATGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LCNTSSSLQECLPPQISKCCPHG*FKAMQD
Trigger: ATCCTGCATCGCCTTAAAGCAGCCATGGGGACAGCA...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTAGTTCCCTTCAGGAATaGCTGCCTCCCCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPSSLQE*LPPQIS
Trigger: TGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACT...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGGACGGTATTTCTTCTTaGTTGTCCAGGAAAAGTCGC +
Preference number: 4 (lower is better)
Translates to: AEARSGFILPSTLAAMGWDGISS*LSRKSR
Trigger: GCGACTTTTCCTGGACAACCAAGAAGAAATACCGTC...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGGACGGTATTTCTTCTTaGTTGTCCAGGAAAAGTCGC +
Preference number: 4 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTDGISS*LSRKSR
Trigger: GCGACTTTTCCTGGACAACCAAGAAGAAATACCGTC...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp AAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGGCCTGCATCTCGGGCTaGAGAATAGGCAACGGCAAA +
Preference number: 4 (lower is better)
Translates to: KSPLELEGWHLPQQQSNLACISG*RIGNGK
Trigger: TTTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGC...CAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTGCAAGACCTGTACGGTaGTGCACTGCCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSARPVR*CTALLE
Trigger: TTCCAGGAGGGCAGTGCACCACCGTACAGGTCTTGC...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTAGTTGCCACCGCCCGTaGAGATGTCACCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSCHRP*RCHPRS
Trigger: GCTTCGAGGGTGACATCTCCACGGGCGGTGGCAACT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGATGTCTTGCCACAACTaGAAGAAGTCATCACAGATG +
Preference number: 4 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLMSCHN*KKSSQM
Trigger: CATCTGTGATGACTTCTTCCAGTTGTGGCAAGACAT...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTTTCTCCTTTGCAGCATaGAGAAGTGGTTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFFSFAA*RSGLHW
Trigger: CCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAA...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAAAAGAGCTGAACAAATaGGATGGCACCTGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRAKELNK*DGTCLE
Trigger: CTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTT...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp AAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCGGTAGCTGCTGCACTTaGGAATCAAGGACCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KANSTSLNSRIDTRTPSSGSCCT*ESRTCG
Trigger: CCCACAGGTCCTTGATTCTCAAGTGCAGCAGCTACC...GGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCAGTCTGTGATGAAAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCTGCTATAGCCACTGTTaGTGCCCAAGGCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: PVCDENLLLSSKDGICHSCYSHC*CPRPIP
Trigger: TGGAATTGGCCTTGGGCATCAACAGTGGCTATAGCA...GCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATCACAGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR TCA 90 bp AAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCAGAAGAATTGGTTGTaGGAGAGGTCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KSPLELEGWHLPQQQSNLQKNWL*ERSGVA
Trigger: AGCCACCCCAGACCTCTCTCACAACCAATTCTTCTG...CAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: PKANSTSLNSRIDTRTPSNRPPI*AANEEL
Trigger: CAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTT...GGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTACTCTGCCCCATTCATaGGGGATGGTTCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSTLPHS*GMVPSL
Trigger: CAGAGACGGAACCATCCCTCATGAATGGGGCAGAGT...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTTCCCCTGGTGGGGGCTaGAGCCAGAAGTGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSPGGG*SQKWLY
Trigger: ATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGA...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCATCTCTCTGTTGCCTaGATCTCGGGCTGGAGAATA +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPHLSVA*ISGWRI
Trigger: TATTCTCCAGCCCGAGATGCAGGCAACAGAGAGATG...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTAGGGCATCTCTCTGTTaGCTGCATCTCGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLRASLC*LHLGLE
Trigger: CTCCAGCCCGAGATGCAGGCAACAGAGAGATGCCCT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTTCGAAGGATGGCATCTaGCACAGCAGCAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVSKDGI*HSSKVT
Trigger: GGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGA...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTACCTTTATGTTGGGGTaGAGCAGCATCAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSTFMLG*SSISAL
Trigger: GAGGGCGCTGATGCTGCTGCACCCCAACATAAAGGT...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAGATTGCTGTAGTCCTTaGCCAGCCAGAAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: VTPLVPFRNACLPRSQRADCCSP*PARRIG
Trigger: ACCAATTCTTCTGGCTGGGCAAGGACTACAGCAATC...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp AAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCTGTACGGTGGTGCACTaGCCTCCTGGAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: KANSTSLNSRIDTRTPSSCTVVH*PPGSVK
Trigger: CTTCACACTTCCAGGAGGGCAGTGCACCACCGTACA...GGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGCCGGTCATTGATGTTTaGAGAACCAATGATGACTGT +
Preference number: 4 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQPVIDV*RTNDDC
Trigger: ACAGTCATCATTGGTTCTGCAAACATCAATGACCGG...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTTGGAGGGAGTTAATGTaGCCTCCTTCCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSWRELM*PPSFPW
Trigger: CCAGGGGAAGGAAGGAGGGCACATTAACTCCCTCCA...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTTCATCGGACTCCATCTaGAGCTGGCTGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSSSDSI*SWLESS
Trigger: ACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATGA...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp GAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCACAACCAGGAACTCTGTCATaGCATGGTAGTTGCGATAGA +
Preference number: 4 (lower is better)
Translates to: ELEGWHLPQQQSNLPHSQPGTLS*HGSCDR
Trigger: TCTATCGCAACTACCATGCCATGACAGAGTTCCTGG...TTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp AGCCAGGGTCAAAGAGCTGAACAAATGAGATGGCACCTGTCTCGAGGCACATGTGCTGAACAAATGAGATaGCACCTGTCTCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: SQGQRAEQMRWHLSRGTCAEQMR*HLSRGT
Trigger: TGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGC...ACATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp AAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCTTGAGCTCGAAGGATaGCATCTGCCACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KSPLELEGWHLPQQQSNLLELEG*HLPQQQ
Trigger: TTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAG...CAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTAAGTGCAGAATGGCCTaGATGGAGTTGCCACCGCCC +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLKCRMA*MELPPP
Trigger: GGGCGGTGGCAACTCCATCCAGGCCATTCTGCACTT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTGAATGGGCCGGATGGTCAAGAGACGGTTaGGGTAATTCTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: SAFLLSIMSSLQSSEWAGWSRDG*GNSPGI
Trigger: AATACCTGGAGAATTACCTCAACCGTCTCTTGACCA...TCCGGCCCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTACTCTGCCCCATTCATaGGGGATGGTTCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLTLPHS*GMVPSL
Trigger: CAGAGACGGAACCATCCCTCATGAATGGGGCAGAGT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp GCCCAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCAGCAGCAAAGTAACCTaGCCCATTCACAAACCACCG +
Preference number: 4 (lower is better)
Translates to: AQGQFHFFKQQNRHTDTLSSKVT*PIHKPP
Trigger: CGGTGGTTTGTGAATGGGGCAGGTTACTTTGCTGCT...GAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTGATCTCAAAGGGCACTaGCCTCAGTCCTTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSDLKGH*PQSLGL
Trigger: TAACCCCAAGGACTGAGGGCAGTGCCCTTTGAGATC...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCCACCTTGGATCCGCTaGTATATCTTTCGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGQFHFFKQQNRHTDTLLPPWIR*YIFRCP
Trigger: TGGGCACCGAAAGATATACCAGCGGATCCAAGGTGG...GAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp CAGGAACTCTGTCATGGCATGGTAGTTGCGATAGAAAGACATGGTCAAGAGACGAGAATCAAGGACCTGTaGGAGGTATCGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: QELCHGMVVAIERHGQETRIKDL*EVSIRT
Trigger: CGTGCGGATCGATACCTCCCACAGGTCCTTGATTCT...CGTCTCTTGACCATGTCTTTCTATCGCAACTACCATGCCATGACAGAGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp AAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCGCATCACCTTTATGTTaGGGTGCAGCAGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: KANSTSLNSRIDTRTPSSASPLC*GAAASA
Trigger: CGCTGATGCTGCTGCACCCCAACATAAAGGTGATGC...GGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTTGGTCAAGAGACGGTTaGGGTAATTCTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPWSRDG*GNSPGI
Trigger: AATACCTGGAGAATTACCTCAACCGTCTCTTGACCA...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTGGGATAAAGGACAGCTaGCTGACTTCCAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSGIKDS*LTSRNS
Trigger: AGAGTTCCTGGAAGTCAGTCAGCTGTCCTTTATCCC...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTCATCTCTCTGTTGCCTaGATCTCGGGCTGGAGAATA +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSHLSVA*ISGWRI
Trigger: TATTCTCCAGCCCGAGATGCAGGCAACAGAGAGATG...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGCAGCAAAGTAACCTaGCCCATTCACAAACCACCG +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSSSKVT*PIHKPP
Trigger: CGGTGGTTTGTGAATGGGGCAGGTTACTTTGCTGCT...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTTCGAAGGATGGCATCTaGCACAGCAGCAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSSKDGI*HSSKVT
Trigger: GGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGA...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTAGTTCCCTTCAGGAATaGCTGCCTCCCCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSSLQE*LPPQIS
Trigger: TGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTGACGGTATTTCTTCTTaGTTGTCCAGGAAAAGTCGC +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPDGISS*LSRKSR
Trigger: GCGACTTTTCCTGGACAACCAAGAAGAAATACCGTC...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp AATGAAATCTTCGAAAGGCCGGTCCAGCTGCACCCAGTCCTTGGTGATAAGATTCCACCAGCCACCTCTTaGACCAGCGATAACAAACTT +
Preference number: 4 (lower is better)
Translates to: NEIFERPVQLHPVLGDKIPPATS*TSDNKL
Trigger: AAGTTTGTTATCGCTGGTCCAAGAGGTGGCTGGTGG...AATCTTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAAGATTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CCA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTGCTGAACAAATGAGATaGCACCTGTCTCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSAEQMR*HLSRGT
Trigger: TGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGC...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTAGAATCAAGGACCTGTaGGAGGTATCGATCCGCACG +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLRIKDL*EVSIRT
Trigger: CGTGCGGATCGATACCTCCCACAGGTCCTTGATTCT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCTTGAGCTCGAAGGATaGCATCTGCCACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLLELEG*HLPQQQ
Trigger: TTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAG...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp AATGAAATCTTCGAAAGGCCGGTCCAGCTGCACCCAGTCCTTGGTGATAAGATTAAAGAGCTGAACAAATaGGATGGCACCTGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: NEIFERPVQLHPVLGDKIKELNK*DGTCLE
Trigger: CTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTT...AATCTTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAAGATTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR TCA 90 bp AAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGATGAAAATCTCCTCTTaGGCTCGAAGGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: KSPLELEGWHLPQQQSNLMKISS*ARRMAS
Trigger: AGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCAT...CAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR GCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTTCATGGCATGGTAGTTaGGATAGAAAGACATGGTCA +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPSWHGS*DRKTWS
Trigger: TGACCATGTCTTTCTATCGCAACTACCATGCCATGA...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTTCATGGCATGGTAGTTaGGATAGAAAGACATGGTCA +
Preference number: 4 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVSWHGS*DRKTWS
Trigger: TGACCATGTCTTTCTATCGCAACTACCATGCCATGA...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp AAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCGATTGCTGTAGTCCTTaGCCAGCCAGAAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: KANSTSLNSRIDTRTPSSDCCSP*PARRIG
Trigger: ACCAATTCTTCTGGCTGGGCAAGGACTACAGCAATC...GGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCGGTCATTGATGTTTaGAGAACCAATGATGACTGT +
Preference number: 4 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPPVIDV*RTNDDC
Trigger: ACAGTCATCATTGGTTCTGCAAACATCAATGACCGG...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR TCA 90 bp CAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCGCCTTATGAAAATCTCCTCTTaGGCTCGAAGGATGGCATCT +
Preference number: 4 (lower is better)
Translates to: QFHFFKQQNRHTDTLLRLMKISS*ARRMAS
Trigger: AGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCAT...AAGGCGGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR TCA 90 bp CAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCGCCTTCAGCTAATGAAGAACTaGTTCTGGGGCAAGAATCAG +
Preference number: 4 (lower is better)
Translates to: QFHFFKQQNRHTDTLLRLQLMKN*FWGKNQ
Trigger: CTGATTCTTGCCCCAGAATCAGTTCTTCATTAGCTG...AAGGCGGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR GCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCATAGATATTGGCGTTaGTCTCAGCCATGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLHRYWR*SQPCLA
Trigger: GGCAAGACATGGCTGAGAGCAACGCCAATATCTATG...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTTCTGCTCATAGATATTaGCGTTGCTCTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSAHRY*RCSQPC
Trigger: ACATGGCTGAGAGCAACGCCAATATCTATGAGCAGA...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR GCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTTCATGGCATGGTAGTTaGGATAGAAAGACATGGTCA +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSWHGS*DRKTWS
Trigger: TGACCATGTCTTTCTATCGCAACTACCATGCCATGA...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CCA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTATGTCTTGCCACAACTaGAAGAAGTCATCACAGATG +
Preference number: 4 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLMSCHN*KKSSQM
Trigger: CATCTGTGATGACTTCTTCCAGTTGTGGCAAGACAT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAGGGATCATGCCCTCCTaGCTACCCAGCGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASGIMPS*LPSGGS
Trigger: GCTGCCCCCGCTGGGTAGCAAGGAGGGCATGATCCC...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS CCA 90 bp CATCGGACTCCATCTGGAGCTGGCTGGAGTCCAGTTCGTCCCCAGTaGGGAAGAGGCTCTCAGGGGTCGCCGTCATCCCTGGCAGACGGA +
Preference number: 5 (lower is better)
Translates to: HRTPSGAGWSPVRPQ*GRGSQGSPSSLADG
Trigger: TCCGTCTGCCAGGGATGACGGCGACCCCTGAGAGCCTCTTCCCCACTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
CDS-3UTR CAA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCACAGGAATGCTACCACTaGGTCCACCACCAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASQECYH*VHHQEL
Trigger: AAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCCTG...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAGTGGGAGTCTTGTACTaGGCCTTGGTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASVGVLY*ALVVLV
Trigger: CACCAAGACCACCAAGGCCAAGTACAAGACTCCCAC...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTGGGATCATGCCCTCCTaGCTACCCAGCGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPGIMPS*LPSGGS
Trigger: GCTGCCCCCGCTGGGTAGCAAGGAGGGCATGATCCC...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp GGAATGCTACCACTTGGTCCACCACCAGGAGCTTCTCATGATGGGCCCACAACGCCTCGGCCTCCAGCCTaGGTCCCAGGCTCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: GMLPLGPPPGASHDGPTTPRPPA*VPGSRR
Trigger: ACGCCTGGAGCCTGGGACCAAGGCTGGAGGCCGAGG...CGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS GCA 90 bp TCAGGGCTGGACTCCTTGGGACACTTGGGGCAGGGAGAAAGAGCCTaGCAGAGGGAGGGCTGTACCACCGTTGACCCCTCTCATCCCACT +
Preference number: 5 (lower is better)
Translates to: SGLDSLGHLGQGERA*QREGCTTVDPSHPT
Trigger: AGTGGGATGAGAGGGGTCAACGGTGGTACAGCCCTCCCTCTGGCAGGCTCTTTCTCCCTGCCCCAAGTGTCCCAAGGAGTCCAGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572199.1
ENST00000576329.1
CDS CCA 90 bp TCTCCCTCCTTCAGGGTGTCCACCTCATCGGACTCCATCTGGAGCTaGCTGGAGTCCAGTTCGTCCCCAGTGGGGAAGAGGCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SPSFRVSTSSDSIWS*LESSSSPVGKRLSG
Trigger: CCCTGAGAGCCTCTTCCCCACTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATGAGGTGGACACCCTGAAGGAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 90 bp CTGGCCACCTTGGATCCGCTGGTATATCTTTCGGTGCCCACCACCTaGGCTGTGACAGGGACCCCAGGTGCGAACACCAAGGGGTGCACT +
Preference number: 5 (lower is better)
Translates to: LATLDPLVYLSVPTT*AVTGTPGANTKGCT
Trigger: AGTGCACCCCTTGGTGTTCGCACCTGGGGTCCCTGTCACAGCCCAGGTGGTGGGCACCGAAAGATATACCAGCGGATCCAAGGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574268.1
CDS-3UTR CAA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCACTCCCCAGCCCAGGGTaGGGAGTGCCCTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: PLVGAEARSGFILPSTLALPSPG*GVPFSA
Trigger: AGCTGAAAAGGGCACTCCCAACCCTGGGCTGGGGAG...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS CCA 90 bp GTTCCCACCTTGGATCCGCTGGTATATCTTTCGGTGCCCACCACCTaGGCTGTGACAGGGACCCCAGGTGCGAACACCAAGGGGTGCACT +
Preference number: 5 (lower is better)
Translates to: VPTLDPLVYLSVPTT*AVTGTPGANTKGCT
Trigger: AGTGCACCCCTTGGTGTTCGCACCTGGGGTCCCTGTCACAGCCCAGGTGGTGGGCACCGAAAGATATACCAGCGGATCCAAGGTGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575246.6
ENST00000575316.1
CDS CCA 90 bp CCACGGCCACGTACTCCCGGAGAGTCCGCAGGGAACGCGTGGCATTaGATGGCAGGCAGCGGAAGATCTGCTCATAGATATTGGCGTTGC +
Preference number: 5 (lower is better)
Translates to: PRPRTPGESAGNAWH*MAGSGRSAHRYWRC
Trigger: GCAACGCCAATATCTATGAGCAGATCTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCCTGCGGACTCTCCGGGAGTACGTGGCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS CCA 90 bp AGGGCTCCACGGCCACGTACTCCCGGAGAGTCCGCAGGGAACGCGTaGCATTGGATGGCAGGCAGCGGAAGATCTGCTCATAGATATTGG +
Preference number: 5 (lower is better)
Translates to: RAPRPRTPGESAGNA*HWMAGSGRSAHRYW
Trigger: CCAATATCTATGAGCAGATCTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCCTGCGGACTCTCCGGGAGTACGTGGCCGTGGAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS-3UTR CAA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCATCCAGGTATTTCTGTTaGCTGGCTGCATGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASSRYFC*LAACLV
Trigger: CACCAGACATGCAGCCAGCAAACAGAAATACCTGGA...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp GTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATCCCAGCGGCCATAGGCAAGCAGCTCAGTGATCTCTaGGGCCCACCACCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: VSKVSQSVVQVIPAAIGKQLSDL*GPPPCL
Trigger: CAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTG...CTTGCCTATGGCCGCTGGGATGACCTGCACTACCGACTGACTGACCTTGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTATGGCCTGGATGGAGTaGCCACCGCCCGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGMAWME*PPPVEM
Trigger: CATCTCCACGGGCGGTGGCAACTCCATCCAGGCCAT...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTCACTGCCCTCAGTCCTaGGGGTTAAGGGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGHCPQS*GLRGRE
Trigger: CTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTG...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS TCA 90 bp CCTTGGATCCGCTGGTATATCTTTCGGTGCCCACCACCTGGGCTGTaGCAGGGACCCCAGGTGCGAACACCAAGGGGTGCACTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: PWIRWYIFRCPPPGL*QGPQVRTPRGALSE
Trigger: CTCTGAAAGTGCACCCCTTGGTGTTCGCACCTGGGGTCCCTGTCACAGCCCAGGTGGTGGGCACCGAAAGATATACCAGCGGATCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 90 bp GAGGCCAAGCCAAGGAGGTCAGGGGAGTCAGAAGCCAGAAAGCTCTaGAGAGTGAAGACCGGAGGACAGTCGTGGGTCAGAGGTGACAGC +
Preference number: 5 (lower is better)
Translates to: EAKPRRSGESEARKL*RVKTGGQSWVRGDS
Trigger: GCTGTCACCTCTGACCCACGACTGTCCTCCGGTCTTCACTCTCCAGAGCTTTCTGGCTTCTGACTCCCCTGACCTCCTTGGCTTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574796.1
CDS CCA 90 bp CATCGGACTCCATCTGGAGCTGGCTGGAGTCCAGTTCGTCCCCAGTaGGGAAGAGGCTCTCAGGGGTCGCCGTCATCCTTAGTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: HRTPSGAGWSPVRPQ*GRGSQGSPSSLVLH
Trigger: ATGAAGGACTAAGGATGACGGCGACCCCTGAGAGCCTCTTCCCCACTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575316.1
CDS-3UTR CAA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCGCTCCTTTTCCCCACTaGCACCTCAAAGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTAPFPH*HLKARV
Trigger: GACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGC...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp AGCCAGACGTGGTGGGGCACAGCAGCTGGTGACCTCTCCCTGACGGGGGCCTCAAGCAAGCTCCGGTCATaGATGTTTGCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: SQTWWGTAAGDLSLTGASSKLRS*MFAEPM
Trigger: CATTGGTTCTGCAAACATCAATGACCGGAGCTTGCT...TGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS TCA 90 bp GCAGACTCAAGGCAAACCTGCCCGCCTGATACTCTGCCCCATTCATaGGGGATGGTTCCGTCTCTGTGTCCTCGATCAGCACGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: ADSRQTCPPDTLPHS*GMVPSLCPRSARPA
Trigger: AGCTGGCCGTGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGGTTTGCCTTGAGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS CCA 90 bp CAAGGCAAACCTGCCCGCCTGATACTCTGCCCCATTCATGAGGGATaGTTCCGTCTCTGTGTCCTCGATCAGCACGGCCAGCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: QGKPARLILCPIHEG*FRLCVLDQHGQLTV
Trigger: GACAGTGAGCTGGCCGTGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGGTTTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS-3UTR CAA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCCCAGCGATAACAAACTaGGTCTCGGCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTPAITN*VSATAG
Trigger: ACCTGCTGTGGCCGAGACCAAGTTTGTTATCGCTGG...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATCAGCTCAGTGATCTCTaGGGCCCACCACCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: PLELEGWHLPQQQSNLPHQLSDL*GPPPCL
Trigger: CAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTG...ATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR CAA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGGGCCCACAACGTCACTaGGTCTGGGTGACGCATCAC +
Preference number: 5 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQGPQRH*VWVTHH
Trigger: GTGATGCGTCACCCAGACCAAGTGACGTTGTGGGCC...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTTGGCCTTGGTGGTCTaGGTGAAGTTCCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPLALVV*VKFQRW
Trigger: CCAGCGCTGGAACTTCACCAAGACCACCAAGGCCAA...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS GCA 90 bp GCAGTGCTTCCGCAGACTCAAGGCAAACCTGCCCGCCTGATACTCTaGCCCATTCATGAGGGATGGTTCCGTCTCTGTGTCCTCGATCAG +
Preference number: 5 (lower is better)
Translates to: AVLPQTQGKPARLIL*PIHEGWFRLCVLDQ
Trigger: CTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGGTTTGCCTTGAGTCTGCGGAAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS-3UTR CAA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTCCAGCGATAACAAACTaGGTCTCGGCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPPAITN*VSATAG
Trigger: ACCTGCTGTGGCCGAGACCAAGTTTGTTATCGCTGG...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCATCCTCCGCCTTCCTCTaGAGCATAATGTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: PLVGAEARSGFILPSTLASSAFL*SIMSSL
Trigger: GAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGA...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGCGCATCACCTTTATGTaGGGGTGCAGCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLRITFM*GCSSIS
Trigger: GCTGATGCTGCTGCACCCCAACATAAAGGTGATGCG...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TCTGTTGCCTGCATCTCGGGCTGGAGAATAGGCAACGGCAAATCTGCCCTCTACGGCCCACAACGTCACTaGGTCTGGGTGACGCATCAC +
Preference number: 5 (lower is better)
Translates to: SVACISGWRIGNGKSALYGPQRH*VWVTHH
Trigger: GTGATGCGTCACCCAGACCAAGTGACGTTGTGGGCC...GTAGAGGGCAGATTTGCCGTTGCCTATTCTCCAGCCCGAGATGCAGGCAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGTTGGCCTTGGTGGTCTaGGTGAAGTTCCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AEARSGFILPSTLAAMGWLALVV*VKFQRW
Trigger: CCAGCGCTGGAACTTCACCAAGACCACCAAGGCCAA...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp GGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGCACTGGGCAGATCTCATCGCCCACCTaGTTCAGAACCGTCCGCCCA +
Preference number: 5 (lower is better)
Translates to: GRSCASPLQHGEVVCTGQISSPT*FRTVRP
Trigger: TGGGCGGACGGTTCTGAACAAGGTGGGCGATGAGAT...CTGCCCAGTGCAAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TGGGTAGTAGGGCCTGGGGCAGAGCCCCCTTCTCCTGGAATAAGAGGCTTGACCAGTCTGGCCGGGTATTaGCTCCAAGAATCACACCGA +
Preference number: 5 (lower is better)
Translates to: WVVGPGAEPPSPGIRGLTSLAGY*LQESHR
Trigger: TCGGTGTGATTCTTGGAGCAAATACCCGGCCAGACT...GGTCAAGCCTCTTATTCCAGGAGAAGGGGGCTCTGCCCCAGGCCCTACTACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263088.11
CDS TCA 90 bp CCCCCTTCAACCGGGCTCAAACCACACCCACAGTCCCCACCTTCCTaGCAGTCCACCTTACTTGTGGGCCTTCAGGATTCTGTCCACAAT +
Preference number: 5 (lower is better)
Translates to: PPSTGLKPHPQSPPS*QSTLLVGLQDSVHN
Trigger: ATTGTGGACAGAATCCTGAAGGCCCACAAGTAAGGTGGACTGTCAGGAAGGTGGGGACTGTGGGTGTGGTTTGAGCCCGGTTGAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572127.1
CDS TCA 90 bp TTGCTCCAAGAATCACACTGCCCGCCTGATACTCTGCCCCATTCATaGGGGATGGTTCCGTCTCTGTGTCCTCGATCAGCACGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: LLQESHCPPDTLPHS*GMVPSLCPRSARPA
Trigger: AGCTGGCCGTGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGTGTGATTCTTGGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS CCA 90 bp AAGAATCACACTGCCCGCCTGATACTCTGCCCCATTCATGAGGGATaGTTCCGTCTCTGTGTCCTCGATCAGCACGGCCAGCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: KNHTARLILCPIHEG*FRLCVLDQHGQLTV
Trigger: GACAGTGAGCTGGCCGTGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGTGTGATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS-3UTR CAA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTGTGCAGGTTCCCACCTaGGATCCGCTGGTATATCTT +
Preference number: 5 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPVQVPT*DPLVYL
Trigger: AAGATATACCAGCGGATCCAAGGTGGGAACCTGCAC...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAAGACTCATCAAGACTTaGTGTCTCAGGAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: PLVGAEARSGFILPSTLARLIKT*CLRRSR
Trigger: TCGGGACCTCCTGAGACACAAAGTCTTGATGAGTCT...TGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGCAGCTCAGTGATCTCTaGGGCCCACCACCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: LCNTSSSLQECLPPQISKQLSDL*GPPPCL
Trigger: CAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTG...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCAGCTCAGTGATCTCTaGGGCCCACCACCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPQLSDL*GPPPCL
Trigger: CAGGCACGGTGGTGGGCCCAAGAGATCACTGAGCTG...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCACTGCCCTCAGTCCTTGTCCTCCGCCTTCCTCTaGAGCATAATGTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: PSGMPASPDLKGHCPQSLSSAFL*SIMSSL
Trigger: GAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGA...CAAGGACTGAGGGCAGTGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp GCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTTGGCAGCAATGGGCTGGCGCATCACCTTTATGTaGGGGTGCAGCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: AEARSGFILPSTLAAMGWRITFM*GCSSIS
Trigger: GCTGATGCTGCTGCACCCCAACATAAAGGTGATGCG...CCAGCCCATTGCTGCCAAGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TGTCCAGTCTCCAGTCATCTGAATGGGCCGGACGCTTCAGGTAAACCTCAGGACTTGGCCTTGGTGGTCTaGGTGAAGTTCCAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: CPVSSHLNGPDASGKPQDLALVV*VKFQRW
Trigger: CCAGCGCTGGAACTTCACCAAGACCACCAAGGCCAA...GTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGAGACTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp TCCAGTCATCTGAATGGGCCGGACGCTTCAGGTAAACCTCAGGACTCAACCACCATCTCATCGCCCACCTaGTTCAGAACCGTCCGCCCA +
Preference number: 5 (lower is better)
Translates to: SSHLNGPDASGKPQDSTTISSPT*FRTVRP
Trigger: TGGGCGGACGGTTCTGAACAAGGTGGGCGATGAGAT...GGTGGTTGAGTCCTGAGGTTTACCTGAAGCGTCCGGCCCATTCAGATGACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTATGGCCTGGATGGAGTaGCCACCGCCCGTGGAGATG +
Preference number: 5 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPMAWME*PPPVEM
Trigger: CATCTCCACGGGCGGTGGCAACTCCATCCAGGCCAT...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGAGGGAACGCGTGGCATaGGATGGCAGGCAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LCNTSSSLQECLPPQISKRERVA*DGRQRK
Trigger: CTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCCT...CTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TCCTTCCCCTGGTGGGGGCTGAAGCCAGAAGTGGCTTTATCCTTCCCTCCACCTAGTCTGGCCGGGTATTaGCTCCAAGAATCACACTGC +
Preference number: 5 (lower is better)
Translates to: SFPWWGLKPEVALSFPPPSLAGY*LQESHC
Trigger: GCAGTGTGATTCTTGGAGCAAATACCCGGCCAGACT...AGGTGGAGGGAAGGATAAAGCCACTTCTGGCTTCAGCCCCCACCAGGGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS GCA 90 bp ATATCTTTCGGTGCCCACCACCTGGGCTGTGACAGGGACCCCAGGTaGGAACACCAAGGGGTGCACTTTCAGAGACTGAAGCTCATAGAT +
Preference number: 5 (lower is better)
Translates to: ISFGAHHLGCDRDPR*EHQGVHFQRLKLID
Trigger: ATCTATGAGCTTCAGTCTCTGAAAGTGCACCCCTTGGTGTTCGCACCTGGGGTCCCTGTCACAGCCCAGGTGGTGGGCACCGAAAGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS GCA 90 bp GTCATCACAGATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTTaGTCCAAGAATCACACTATAGGAGAAAGGGGTCCCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VITDGVSEIQVWPGI*SKNHTIGERGPSRA
Trigger: GGCCCTGCTGGGACCCCTTTCTCCTATAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575945.1
CDS-3UTR CAA 90 bp GTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATCCCAGCGGCCATAGGCAAGAGACTCATCAAGACTTaGTGTCTCAGGAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: VSKVSQSVVQVIPAAIGKRLIKT*CLRRSR
Trigger: TCGGGACCTCCTGAGACACAAAGTCTTGATGAGTCT...CTTGCCTATGGCCGCTGGGATGACCTGCACTACCGACTGACTGACCTTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTTCATCCTCTAGGAACTaGAGGGGGAAGTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFSSSRN*RGKWTR
Trigger: CCTGGTCCACTTCCCCCTCAAGTTCCTAGAGGATGA...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS TCA 90 bp GTCCACAATCTCATCGCCCACCTTGTTCAGAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTGATTCTGTACGGTGGTGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: VHNLIAHLVQNRPPI*AANEELILYGGALP
Trigger: GGGCAGTGCACCACCGTACAGAATCAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTTCTGAACAAGGTGGGCGATGAGATTGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576983.5
CDS-3UTR CAA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGTGCAGGTTCCCACCTaGGATCCGCTGGTATATCTT +
Preference number: 5 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFVQVPT*DPLVYL
Trigger: AAGATATACCAGCGGATCCAAGGTGGGAACCTGCAC...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGGTATTTCTTCTTGGTaGTCCAGGAAAAGTCGCCGT +
Preference number: 5 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGGISSW*SRKSRR
Trigger: ACGGCGACTTTTCCTGGACAACCAAGAAGAAATACC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTGCTCCTTTTCCCCACTaGCACCTCAAAGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPAPFPH*HLKARV
Trigger: GACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGC...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CAGGTAGGGGTATGTGGGAGTCTTGTACTTGGCCTTGGTGGTCTTGGTGAAGTTGCTCCTTTTCCCCACTaGCACCTCAAAGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QVGVCGSLVLGLGGLGEVAPFPH*HLKARV
Trigger: GACCCTGGCTTTGAGGTGCAAGTGGGGAAAAGGAGC...AACTTCACCAAGACCACCAAGGCCAAGTACAAGACTCCCACATACCCCTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTGATGAAAATCTCCTCTaGAGCTCGAAGGATGGCATC +
Preference number: 5 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGDENLL*SSKDGI
Trigger: GATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATC...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp GTCTCCAAGGTCAGTCAGTCGGTAGTGCAGGTCATCCCAGCGGCCATAGGCAAGGATGAAAATCTCCTCTaGAGCTCGAAGGATGGCATC +
Preference number: 5 (lower is better)
Translates to: VSKVSQSVVQVIPAAIGKDENLL*SSKDGI
Trigger: GATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATC...CTTGCCTATGGCCGCTGGGATGACCTGCACTACCGACTGACTGACCTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp TCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCTCCTCCGCCTTCCTCTaGAGCATAATGTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: SPLELEGWHLPQQQSNLPSSAFL*SIMSSL
Trigger: GAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGA...GGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR CAA 90 bp TCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTGAATGGGCCGGACGCATCACCTTTATGTaGGGGTGCAGCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: SAFLLSIMSSLQSSEWAGRITFM*GCSSIS
Trigger: GCTGATGCTGCTGCACCCCAACATAAAGGTGATGCG...TCCGGCCCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp CCCTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTAGCAAGCTCCGGTCATaGATGTTTGCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: PCSPWQELCFSFAAWRSGSKLRS*MFAEPM
Trigger: CATTGGTTCTGCAAACATCAATGACCGGAGCTTGCT...ACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TTGGGAGTGCCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTCTCCCCAGCCCAGGGTaGGGAGTGCCCTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LGVPFSAISHVRVLCNTSLPSPG*GVPFSA
Trigger: AGCTGAAAAGGGCACTCCCAACCCTGGGCTGGGGAG...AGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGGCACTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS TCA 90 bp GTCCCGCCATGCTGTCCCCATGGCTGCTTTAAGGCGATGCAGGATTaGATACTCCCCACGACACAGGGTCCTGTAAGTAAAGTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: VPPCCPHGCFKAMQD*ILPTTQGPVSKVQN
Trigger: ATTCTGCACTTTACTTACAGGACCCTGTGTCGTGGGGAGTATTCAATCCTGCATCGCCTTAAAGCAGCCATGGGGACAGCATGGCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000571273.5
ENST00000572127.1
ENST00000572940.5
ENST00000576983.5
CDS GCA 90 bp CCGGTCATTGATGTTTGCAGAACCAATGATGACTGTCCGGTCATCTaGGATGAGCACCTTGCTGTGGATGTAGATGAGCTCCGAGACGGG +
Preference number: 5 (lower is better)
Translates to: PVIDVCRTNDDCPVI*DEHLAVDVDELRDG
Trigger: CCCGTCTCGGAGCTCATCTACATCCACAGCAAGGTGCTCATCGCAGATGACCGGACAGTCATCATTGGTTCTGCAAACATCAATGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572127.1
ENST00000572940.5
ENST00000576864.1
ENST00000576983.5
CDS CCA 90 bp CAACTGGAAGAAGTCATCACAGATGGGGTCTCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAGAATCACACCGAAGCAGTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: QLEEVITDGVSEIQV*PGICSKNHTEAVLP
Trigger: CGGAAGCACTGCTTCGGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGACTTCTTCCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS CCA 90 bp CAACTGGAAGAAGTCATCACAGATGGGGTCTCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAGAATCACACTGCCCGCCTGATACTC +
Preference number: 5 (lower is better)
Translates to: QLEEVITDGVSEIQV*PGICSKNHTARLIL
Trigger: GAGTATCAGGCGGGCAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGACTTCTTCCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS-3UTR CAA 90 bp CCAGTCTGTGATGAAAATCTCCTCTTGAGCTCGAAGGATGGCATCTGCCACAGCCCAGCGATAACAAACTaGGTCTCGGCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: PVCDENLLLSSKDGICHSPAITN*VSATAG
Trigger: ACCTGCTGTGGCCGAGACCAAGTTTGTTATCGCTGG...GCTGTGGCAGATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATCACAGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp GGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCACAAACCTGGGGGGATGAAAATCTCCTCTaGAGCTCGAAGGATGGCATC +
Preference number: 5 (lower is better)
Translates to: GWHLPQQQSNLPHSQTWGDENLL*SSKDGI
Trigger: GATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATC...CCCCCAGGTTTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575813.5
CDS-3UTR CAA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGTCTTGTACTTGGCCTaGGTGGTCTTGGTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFVLYLA*VVLVKF
Trigger: GAACTTCACCAAGACCACCAAGGCCAAGTACAAGAC...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp AGCCAGGGTCAAAGAGCTGAACAAATGAGATGGCACCTGTCTCGAGGCACATGTGTGGGAGTCTTGTACTaGGCCTTGGTGGTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SQGQRAEQMRWHLSRGTCVGVLY*ALVVLV
Trigger: CACCAAGACCACCAAGGCCAAGTACAAGACTCCCAC...ACATGTGCCTCGAGACAGGTGCCATCTCATTTGTTCAGCTCTTTGACCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTAGGGAACGCGTGGCATaGGATGGCAGGCAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLRERVA*DGRQRK
Trigger: CTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCCT...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCACTGCCCTCAGTCCTaGGGGTTAAGGGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLHCPQS*GLRGRE
Trigger: CTCCCTGCCCCTTAACCCCAAGGACTGAGGGCAGTG...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CTGCTCACCCTGGCAGGAGCTGTGCTTCTCCTTTGCAGCATGGAGAAGTGGTTTGGTATTTCTTCTTGGTaGTCCAGGAAAAGTCGCCGT +
Preference number: 5 (lower is better)
Translates to: LLTLAGAVLLLCSMEKWFGISSW*SRKSRR
Trigger: ACGGCGACTTTTCCTGGACAACCAAGAAGAAATACC...AAACCACTTCTCCATGCTGCAAAGGAGAAGCACAGCTCCTGCCAGGGTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp TCCGCCTTCCTCTTGAGCATAATGTCCAGTCTCCAGTCATCTGAATGGGCCGGATCCAGGTATTTCTGTTaGCTGGCTGCATGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SAFLLSIMSSLQSSEWAGSRYFC*LAACLV
Trigger: CACCAGACATGCAGCCAGCAAACAGAAATACCTGGA...TCCGGCCCATTCAGATGACTGGAGACTGGACATTATGCTCAAGAGGAAGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTGGCCCACAACGTCACTaGGTCTGGGTGACGCATCAC +
Preference number: 5 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLGPQRH*VWVTHH
Trigger: GTGATGCGTCACCCAGACCAAGTGACGTTGTGGGCC...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAGTCTTGTACTTGGCCTaGGTGGTCTTGGTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: VTPLVPFRNACLPRSQRAVLYLA*VVLVKF
Trigger: GAACTTCACCAAGACCACCAAGGCCAAGTACAAGAC...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CTCGAAGGATGGCATCTGCCACAGCAGCAAAGTAACCTGCCCCATTCACAAACCGTCTTGTACTTGGCCTaGGTGGTCTTGGTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LEGWHLPQQQSNLPHSQTVLYLA*VVLVKF
Trigger: GAACTTCACCAAGACCACCAAGGCCAAGTACAAGAC...GGTTTGTGAATGGGGCAGGTTACTTTGCTGCTGTGGCAGATGCCATCCTTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp CACCCAGTCCTTGGTGATAAGATTGCTGTAGTCCTTGCCCAGCCAGAAGAATTGGTGCAGGTTCCCACCTaGGATCCGCTGGTATATCTT +
Preference number: 5 (lower is better)
Translates to: HPVLGDKIAVVLAQPEELVQVPT*DPLVYL
Trigger: AAGATATACCAGCGGATCCAAGGTGGGAACCTGCAC...CAATTCTTCTGGCTGGGCAAGGACTACAGCAATCTTATCACCAAGGACTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS-3UTR CAA 90 bp TCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTAGACTCATCAAGACTTaGTGTCTCAGGAGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: SHVRVLCNTSSSLQECLPRLIKT*CLRRSR
Trigger: TCGGGACCTCCTGAGACACAAAGTCTTGATGAGTCT...AGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp GTAACACCTCTAGTTCCCTTCAGGAATGCCTGCCTCCCCAGATCTCAAAGGGCAGATGAAAATCTCCTCTaGAGCTCGAAGGATGGCATC +
Preference number: 5 (lower is better)
Translates to: VTPLVPFRNACLPRSQRADENLL*SSKDGI
Trigger: GATGCCATCCTTCGAGCTCAAGAGGAGATTTTCATC...TGCCCTTTGAGATCTGGGGAGGCAGGCATTCCTGAAGGGAACTAGAGGTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CAAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCAGGAATGCTACCACTaGGTCCACCACCAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: QGQFHFFKQQNRHTDTLLQECYH*VHHQEL
Trigger: AAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCCTG...GAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575246.6
CDS TCA 90 bp GTCCACAATCTCATCGCCCACCTTGTTCAGAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTGATTCTCAATGTAGAGGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: VHNLIAHLVQNRPPI*AANEELILNVEEVL
Trigger: CAGCACTTCCTCTACATTGAGAATCAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTTCTGAACAAGGTGGGCGATGAGATTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS TCA 90 bp AAAGCTCTGGAGAGTGAAGACCGGAGGACAGTCGTGGGTCAGAGGTaGCAGCAAGGTCAAAGATCAGAAATGATCAGAGAACACAAGTGG +
Preference number: 5 (lower is better)
Translates to: KALESEDRRTVVGQR*QQGQRSEMIREHKW
Trigger: CCACTTGTGTTCTCTGATCATTTCTGATCTTTGACCTTGCTGTCACCTCTGACCCACGACTGTCCTCCGGTCTTCACTCTCCAGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574796.1
CDS CCA 90 bp TCAGGAGGTCCCGATGCAGCTCCTGAAAATGACGGTATTTCTTCTTaGTTGTCCAGGAAAAGTCGCCGTGAGTCAAGCGGACAGAATACA +
Preference number: 5 (lower is better)
Translates to: SGGPDAAPENDGISS*LSRKSRRESSGQNT
Trigger: TGTATTCTGTCCGCTTGACTCACGGCGACTTTTCCTGGACAACCAAGAAGAAATACCGTCATTTTCAGGAGCTGCATCGGGACCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 90 bp CAACTGGAAGAAGTCATCACAGATGGGGTCTCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAGAATCACACTATAGGAGAAAGGGGT +
Preference number: 5 (lower is better)
Translates to: QLEEVITDGVSEIQV*PGICSKNHTIGERG
Trigger: ACCCCTTTCTCCTATAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGACTTCTTCCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575945.1
CDS-3UTR CAA 90 bp AAGGCCAATTCCACTTCTTTAAACAGCAGAATAGACACACGGACACCCTCCTCCTCCTCCGCCTTCCTCTaGAGCATAATGTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: KANSTSLNSRIDTRTPSSSSAFL*SIMSSL
Trigger: GAGACTGGACATTATGCTCAAGAGGAAGGCGGAGGA...GGAGGAGGGTGTCCGTGTGTCTATTCTGCTGTTTAAAGAAGTGGAATTGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575246.6
ENST00000575813.5
CDS-3UTR CAA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTCAGGAATGCTACCACTaGGTCCACCACCAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLQECYH*VHHQEL
Trigger: AAGCTCCTGGTGGTGGACCAAGTGGTAGCATTCCTG...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTTCATCCTCTAGGAACTaGAGGGGGAAGTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSSSRN*RGKWTR
Trigger: CCTGGTCCACTTCCCCCTCAAGTTCCTAGAGGATGA...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS-3UTR CAA 90 bp CCCTTTTCAGCTATTTCTCACGTAAGGGTCCTCTGTAACACCTCTAGTTCCCTTTCCAGGTATTTCTGTTaGCTGGCTGCATGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: PFSAISHVRVLCNTSSSLSRYFC*LAACLV
Trigger: CACCAGACATGCAGCCAGCAAACAGAAATACCTGGA...AAGGGAACTAGAGGTGTTACAGAGGACCCTTACGTGAGAAATAGCTGAAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS TCA 72 bp GGCAGGGAGCCAGACGTGGTGGGGCACAGCAGCTGGTaGCCTCTCCCTGACGGGGGCCTCAACTATGTCCAC +
Preference number: 6 (lower is better)
Translates to: GREPDVVGHSSW*PLPDGGLNYVH
Trigger: GTGGACATAGTTGAGGCCCCCGTCAGGGAGAGGTCACCAGCTGCTGTGCCCCACCACGTCTGGCTCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS CCA 72 bp CCCTCCTTCAGGGTGTCCACCTCATCGGACTCCATCTaGAGCTGGCTGGAGTCCAGTTCGTCCCCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: PSFRVSTSSDSI*SWLESSSSPVG
Trigger: CCCCACTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATGAGGTGGACACCCTGAAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 72 bp CGGCCACGTACTCCCGGAGAGTCCGCAGGGAACGCGTaGCATTGGATGGCAGGCAGCGGAAGATCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: RPRTPGESAGNA*HWMAGSGRSAH
Trigger: ATGAGCAGATCTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCCTGCGGACTCTCCGGGAGTACGTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS CAA 72 bp CCCAGCGGGGGCAGCAAAGACTCATCCTCTAGGAACTaGAGGGGGAAGTGGACCAGGTGGCCCTGGACCTGG +
Preference number: 6 (lower is better)
Translates to: PSGGSKDSSSRN*RGKWTRWPWTW
Trigger: CCAGGTCCAGGGCCACCTGGTCCACTTCCCCCTCAAGTTCCTAGAGGATGAGTCTTTGCTGCCCCCGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS CCA 72 bp GGGTGTCCACCTCATCGGACTCCATCTGGAGCTGGCTaGAGTCCAGTTCGTCCCCAGTGGGGAAGAGGCTCT +
Preference number: 6 (lower is better)
Translates to: GCPPHRTPSGAG*SPVRPQWGRGS
Trigger: AGAGCCTCTTCCCCACTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATGAGGTGGACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 72 bp GCCCGCCCAGCTCTCCGTGTGTACGAAGCCCGCAGATaGAAATATAGTCCCGCCATGCTGTCCCCATGGCTG +
Preference number: 6 (lower is better)
Translates to: ARPALRVYEARR*KYSPAMLSPWL
Trigger: CAGCCATGGGGACAGCATGGCGGGACTATATTTCCATCTGCGGGCTTCGTACACACGGAGAGCTGGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263088.11
ENST00000571273.5
ENST00000572127.1
ENST00000572940.5
ENST00000576864.1
ENST00000576983.5
CDS CCA 72 bp TTCAGGGTGTCCACCTCATCGGACTCCATCTGGAGCTaGCTGGAGTCCAGTTCGTCCCCAGTGGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: FRVSTSSDSIWS*LESSSSPVGKR
Trigger: CCTCTTCCCCACTGGGGACGAACTGGACTCCAGCCAGCTCCAGATGGAGTCCGATGAGGTGGACACCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 72 bp AGTGCAGAATGGCCTGGATGGAGTTGCCACCGCCCGTaGAGATGTCACCCTCGAAGCCAGGGAGTAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SAEWPGWSCHRP*RCHPRSQGVRA
Trigger: TGCCCTTACTCCCTGGCTTCGAGGGTGACATCTCCACGGGCGGTGGCAACTCCATCCAGGCCATTCTGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000571273.5
ENST00000572127.1
ENST00000572940.5
ENST00000576983.5
CDS CCA 72 bp CCTGCCCGCCTGATACTCTGCCCCATTCATGAGGGATaGTTCCGTCTCTGTGTCCTCGATCAGCACGGCCAG +
Preference number: 6 (lower is better)
Translates to: PARLILCPIHEG*FRLCVLDQHGQ
Trigger: CTGGCCGTGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS CCA 72 bp CTCCCGGAGAGTCCGCAGGGAACGCGTGGCATTGGATaGCAGGCAGCGGAAGATCTGCTCATAGATATTGGC +
Preference number: 6 (lower is better)
Translates to: LPESPQGTRGIG*QAAEDLLIDIG
Trigger: GCCAATATCTATGAGCAGATCTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCCTGCGGACTCTCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS CCA 72 bp AGAGTGTGGGCAGCTCTCACACCAGGGAGAGTGGGTTaGGGTGTTAGGCTGAAGGAGACAAAGGGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: RVWAALTPGRVG*GVRLKETKGRA
Trigger: AGCCCTCCCCTTTGTCTCCTTCAGCCTAACACCCCAACCCACTCTCCCTGGTGTGAGAGCTGCCCACACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572199.1
CDS CCA 72 bp ACTGCCCGCCTGATACTCTGCCCCATTCATGAGGGATaGTTCCGTCTCTGTGTCCTCGATCAGCACGGCCAG +
Preference number: 6 (lower is better)
Translates to: TARLILCPIHEG*FRLCVLDQHGQ
Trigger: CTGGCCGTGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS GCA 72 bp TCCCGCCATGCTGTCCCCATGGCTGCTTTAAGGCGATaGAGGATTGAATACTCCCCACGACACAGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: SRHAVPMAALRR*RIEYSPRHRVL
Trigger: CAGGACCCTGTGTCGTGGGGAGTATTCAATCCTGCATCGCCTTAAAGCAGCCATGGGGACAGCATGGCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263088.11
ENST00000571273.5
ENST00000572127.1
ENST00000572940.5
ENST00000576864.1
ENST00000576983.5
CDS GCA 72 bp CCGCAGACTCAAGGCAAACCTGCCCGCCTGATACTCTaGCCCATTCATGAGGGATGGTTCCGTCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: PQTQGKPARLIL*PIHEGWFRLCV
Trigger: GACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGGTTTGCCTTGAGTCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS CCA 72 bp CGTACTCCCGGAGAGTCCGCAGGGAACGCGTGGCATTaGATGGCAGGCAGCGGAAGATCTGCTCATAGATAT +
Preference number: 6 (lower is better)
Translates to: RTPGESAGNAWH*MAGSGRSAHRY
Trigger: ATATCTATGAGCAGATCTTCCGCTGCCTGCCATCCAATGCCACGCGTTCCCTGCGGACTCTCCGGGAGTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS CCA 72 bp CCAAGGAGGTCAGGGGAGTCAGAAGCCAGAAAGCTCTaGAGAGTGAAGACCGGAGGACAGTCGTGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: PRRSGESEARKL*RVKTGGQSWVR
Trigger: TCTGACCCACGACTGTCCTCCGGTCTTCACTCTCCAGAGCTTTCTGGCTTCTGACTCCCCTGACCTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574796.1
CDS TCA 72 bp AGGCAAACCTGCCCGCCTGATACTCTGCCCCATTCATaGGGGATGGTTCCGTCTCTGTGTCCTCGATCAGCA +
Preference number: 6 (lower is better)
Translates to: RQTCPPDTLPHS*GMVPSLCPRSA
Trigger: TGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGGTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS TCA 72 bp ACCGGGCTCAAACCACACCCACAGTCCCCACCTTCCTaGCAGTCCACCTTACTTGTGGGCCTTCAGGATTCT +
Preference number: 6 (lower is better)
Translates to: TGLKPHPQSPPS*QSTLLVGLQDS
Trigger: AGAATCCTGAAGGCCCACAAGTAAGGTGGACTGTCAGGAAGGTGGGGACTGTGGGTGTGGTTTGAGCCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572127.1
CDS GCA 72 bp GATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTTaGTCCAAGAATCACACCGAAGCAGTGCTTCCGCAG +
Preference number: 6 (lower is better)
Translates to: DGVSEIQVWPGI*SKNHTEAVLPQ
Trigger: CTGCGGAAGCACTGCTTCGGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS GCA 72 bp GATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTTaGTCCAAGAATCACACTGCCCGCCTGATACTCTGC +
Preference number: 6 (lower is better)
Translates to: DGVSEIQVWPGI*SKNHTARLILC
Trigger: GCAGAGTATCAGGCGGGCAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS TCA 72 bp GAATCACACTGCCCGCCTGATACTCTGCCCCATTCATaGGGGATGGTTCCGTCTCTGTGTCCTCGATCAGCA +
Preference number: 6 (lower is better)
Translates to: ESHCPPDTLPHS*GMVPSLCPRSA
Trigger: TGCTGATCGAGGACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGTGTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS GCA 72 bp ACTATGTCCACACTTCTAGGGGGATCATGCCCTCCTTaGTACCCAGCGGGGGCAGCAAAGACTCATCCTCTA +
Preference number: 6 (lower is better)
Translates to: TMSTLLGGSCPP*YPAGAAKTHPL
Trigger: TAGAGGATGAGTCTTTGCTGCCCCCGCTGGGTAGCAAGGAGGGCATGATCCCCCTAGAAGTGTGGACATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS CCA 72 bp GAAGTCATCACAGATGGGGTCTCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAGAATCACACTGCCCGC +
Preference number: 6 (lower is better)
Translates to: EVITDGVSEIQV*PGICSKNHTAR
Trigger: GCGGGCAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS CAA 72 bp AGATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTaGCTCCAAGAATCACACCGAAGCAGTGCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: RWGLGDPSLAGY*LQESHRSSASA
Trigger: TGCGGAAGCACTGCTTCGGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS CAA 72 bp AACTATGTCCACACTTCTAGGGGGATCATGCCCTCCTaGCTACCCAGCGGGGGCAGCAAAGACTCATCCTCT +
Preference number: 6 (lower is better)
Translates to: NYVHTSRGIMPS*LPSGGSKDSSS
Trigger: AGAGGATGAGTCTTTGCTGCCCCCGCTGGGTAGCAAGGAGGGCATGATCCCCCTAGAAGTGTGGACATAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS CAA 72 bp AGATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTaGCTCCAAGAATCACACTGCCCGCCTGATACTCTG +
Preference number: 6 (lower is better)
Translates to: RWGLGDPSLAGY*LQESHCPPDTL
Trigger: CAGAGTATCAGGCGGGCAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS CAA 90 bp TCAAACCACACCCACAGTCCCCACCTTCCTGACAGTCCACCTTACTaGTGGGCCTTCAGGATTCTGTCCACAATCTCATCGCCCACCTTG +
Preference number: 6 (lower is better)
Translates to: SNHTHSPHLPDSPPY*WAFRILSTISSPTL
Trigger: CAAGGTGGGCGATGAGATTGTGGACAGAATCCTGAAGGCCCACAAGTAAGGTGGACTGTCAGGAAGGTGGGGACTGTGGGTGTGGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572127.1
CDS CAA 90 bp AGTCATCACAGATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTaGCTCCAAGAATCACACTATAGGAGAAAGGGGTCCCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: SHHRWGLGDPSLAGY*LQESHYRRKGSQQG
Trigger: GCCCTGCTGGGACCCCTTTCTCCTATAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575945.1
CDS GCA 72 bp GATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTTaGTCCAAGAATCACACTATAGGAGAAAGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: DGVSEIQVWPGI*SKNHTIGERGP
Trigger: GGGACCCCTTTCTCCTATAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575945.1
CDS CAA 72 bp AGCTCACTGTCCCGCTTCCCCAGCAAGCTCCGGTCATaGATGTTTGCAGAACCAATGATGACTGTCCGGTCA +
Preference number: 6 (lower is better)
Translates to: SSLSRFPSKLRS*MFAEPMMTVRS
Trigger: TGACCGGACAGTCATCATTGGTTCTGCAAACATCAATGACCGGAGCTTGCTGGGGAAGCGGGACAGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000576864.1
ENST00000576983.5
CDS CAA 72 bp ACCCACAGTCCCCACCTTCCTGACAGTCCACCTTACTaGTGGGCCTTCAGGATTCTGTCCACAATCTCATCG +
Preference number: 6 (lower is better)
Translates to: THSPHLPDSPPY*WAFRILSTISS
Trigger: CGATGAGATTGTGGACAGAATCCTGAAGGCCCACAAGTAAGGTGGACTGTCAGGAAGGTGGGGACTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572127.1
CDS TCA 72 bp CTCATCGCCCACCTTGTTCAGAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTGATTCTGTACGGTGGT +
Preference number: 6 (lower is better)
Translates to: LIAHLVQNRPPI*AANEELILYGG
Trigger: ACCACCGTACAGAATCAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTTCTGAACAAGGTGGGCGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576983.5
CDS GCA 72 bp ATTTGCTCCAAGAATCACACTGCCCGCCTGATACTCTaGCCCATTCATGAGGGATGGTTCCGTCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: ICSKNHTARLIL*PIHEGWFRLCV
Trigger: GACACAGAGACGGAACCATCCCTCATGAATGGGGCAGAGTATCAGGCGGGCAGTGTGATTCTTGGAGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572940.5
CDS CCA 72 bp GAAGTCATCACAGATGGGGTCTCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAGAATCACACCGAAGCA +
Preference number: 6 (lower is better)
Translates to: EVITDGVSEIQV*PGICSKNHTEA
Trigger: TGCTTCGGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000576864.1
CDS CAA 72 bp AGATGGGGTCTCGGAGATCCAAGTCTGGCCGGGTATTaGCTCCAAGAATCACACTATAGGAGAAAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: RWGLGDPSLAGY*LQESHYRRKGS
Trigger: GGACCCCTTTCTCCTATAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575945.1
CDS CAA 90 bp GGAGGTCCCGATGCAGCTCCTGAAAATGACGGTATTTCTTCTTGGTaGTCCAGGAAAAGTCGCCGTGAGTCAAGCGGACAGAATACAGAG +
Preference number: 6 (lower is better)
Translates to: GGPDAAPENDGISSW*SRKSRRESSGQNTE
Trigger: CTCTGTATTCTGTCCGCTTGACTCACGGCGACTTTTCCTGGACAACCAAGAAGAAATACCGTCATTTTCAGGAGCTGCATCGGGACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CAA 90 bp GCGGAAGATCTGCTCATAGATATTGGCGTTGCTCTCAGCCATGTCTaGCCACAACTGGAAGAAGTCATCACAGATGGGGTCTCGGAGATC +
Preference number: 6 (lower is better)
Translates to: AEDLLIDIGVALSHV*PQLEEVITDGVSEI
Trigger: GATCTCCGAGACCCCATCTGTGATGACTTCTTCCAGTTGTGGCAAGACATGGCTGAGAGCAACGCCAATATCTATGAGCAGATCTTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS TCA 72 bp CGGTATTTCTTCTTGGTTGTCCAGGAAAAGTCGCCGTaGGTCAAGCGGACAGAATACAGAGTGCAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: RYFFLVVQEKSP*VKRTEYRVQVP
Trigger: GGGAACCTGCACTCTGTATTCTGTCCGCTTGACTCACGGCGACTTTTCCTGGACAACCAAGAAGAAATACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 72 bp CCCGATGCAGCTCCTGAAAATGACGGTATTTCTTCTTaGTTGTCCAGGAAAAGTCGCCGTGAGTCAAGCGGA +
Preference number: 6 (lower is better)
Translates to: PDAAPENDGISS*LSRKSRRESSG
Trigger: TCCGCTTGACTCACGGCGACTTTTCCTGGACAACCAAGAAGAAATACCGTCATTTTCAGGAGCTGCATCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000574268.1
ENST00000575246.6
ENST00000575316.1
CDS CCA 72 bp ATATTGGCGTTGCTCTCAGCCATGTCTTGCCACAACTaGAAGAAGTCATCACAGATGGGGTCTCGGAGATCC +
Preference number: 6 (lower is better)
Translates to: ILALLSAMSCHN*KKSSQMGSRRS
Trigger: GGATCTCCGAGACCCCATCTGTGATGACTTCTTCCAGTTGTGGCAAGACATGGCTGAGAGCAACGCCAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS TCA 72 bp CTCATCGCCCACCTTGTTCAGAACCGTCCGCCCATCTaGGCAGCTAATGAAGAACTGATTCTCAATGTAGAG +
Preference number: 6 (lower is better)
Translates to: LIAHLVQNRPPI*AANEELILNVE
Trigger: CTCTACATTGAGAATCAGTTCTTCATTAGCTGCTCAGATGGGCGGACGGTTCTGAACAAGGTGGGCGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263088.11
ENST00000572940.5
CDS TCA 72 bp GAGAGTGAAGACCGGAGGACAGTCGTGGGTCAGAGGTaGCAGCAAGGTCAAAGATCAGAAATGATCAGAGAA +
Preference number: 6 (lower is better)
Translates to: ESEDRRTVVGQR*QQGQRSEMIRE
Trigger: TTCTCTGATCATTTCTGATCTTTGACCTTGCTGTCACCTCTGACCCACGACTGTCCTCCGGTCTTCACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574796.1
CDS GCA 72 bp GATGTTTGCAGAACCAATGATGACTGTCCGGTCATCTaGGATGAGCACCTTGCTGTGGATGTAGATGAGCTC +
Preference number: 6 (lower is better)
Translates to: DVCRTNDDCPVI*DEHLAVDVDEL
Trigger: GAGCTCATCTACATCCACAGCAAGGTGCTCATCGCAGATGACCGGACAGTCATCATTGGTTCTGCAAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263088.11
ENST00000572127.1
ENST00000572940.5
ENST00000576864.1
ENST00000576983.5
CDS CCA 72 bp GAAGTCATCACAGATGGGGTCTCGGAGATCCAAGTCTaGCCGGGTATTTGCTCCAAGAATCACACTATAGGA +
Preference number: 6 (lower is better)
Translates to: EVITDGVSEIQV*PGICSKNHTIG
Trigger: TCCTATAGTGTGATTCTTGGAGCAAATACCCGGCCAGACTTGGATCTCCGAGACCCCATCTGTGATGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575945.1
CDS CAA 72 bp CTGCTCATAGATATTGGCGTTGCTCTCAGCCATGTCTaGCCACAACTGGAAGAAGTCATCACAGATGGGGTC +
Preference number: 6 (lower is better)
Translates to: LLIDIGVALSHV*PQLEEVITDGV
Trigger: GACCCCATCTGTGATGACTTCTTCCAGTTGTGGCAAGACATGGCTGAGAGCAACGCCAATATCTATGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263088.11
ENST00000572940.5
ENST00000575945.1
ENST00000576864.1
CDS CCA 72 bp CAAGGTCAAAGATCAGAAATGATCAGAGAACACAAGTaGTATCAGACACATCAAAATAGTGTTTGCCCATAT +
Preference number: 6 (lower is better)
Translates to: QGQRSEMIREHK*YQTHQNSVCPY
Trigger: ATATGGGCAAACACTATTTTGATGTGTCTGATACCACTTGTGTTCTCTGATCATTTCTGATCTTTGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574796.1