RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCXD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000182836

Ensembl transcript IDs: ENST00000328457.5, ENST00000377801.8

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTCTGAAAAGACAATaGCCAGCTGAGACAAATGTGCATAGGCTAAGGATAAGCTTCGAT +
Preference number: 1 (lower is better)
Translates to: APMCSPCATSSLKRQ*PAETNVHRLRISFD
Trigger: ATCGAAGCTTATCCTTAGCCTATGCACATTTGTCTCAGCTGGGCATTGTCTTTTCAGAGAGCTTGTAGCACAAGGGCTACACATGGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 90 bp GGAGCATTTCTAATATGTCGGTGTGTTTTTGGTTGTCCCAGTTACTaGGAAATGCTATATAAGGGATTAATGGGGAAACTTGGACCTCAC +
Preference number: 1 (lower is better)
Translates to: GAFLICRCVFGCPSY*EMLYKGLMGKLGPH
Trigger: GTGAGGTCCAAGTTTCCCCATTAATCCCTTATATAGCATTTCCCAGTAACTGGGACAACCAAAAACACACCGACATATTAGAAATGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 90 bp CTATTAGCAATTCAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTaGTTGAGTGACCAAAGATTAAAAGATTGTGTCGTTGGATCTGTA +
Preference number: 1 (lower is better)
Translates to: LLAIQSEHSAYGTPV*LSDQRLKDCVVGSV
Trigger: TACAGATCCAACGACACAATCTTTTAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTGAATTGCTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR GCA 90 bp CAGAGACTCAGTGGAATAGGAAGATCAGAGTGTTTACAGATAGTATaGCCTAATACAATGAGCTTTCTCCATCTTATTCATGGAAACTCC +
Preference number: 1 (lower is better)
Translates to: QRLSGIGRSECLQIV*PNTMSFLHLIHGNS
Trigger: GGAGTTTCCATGAATAAGATGGAGAAAGCTCATTGTATTAGGGCATACTATCTGTAAACACTCTGATCTTCCTATTCCACTGAGTCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR TCA 90 bp GGAAGTGTTGAACATGGTGGCATTGATCCTATGAAGATATTTACTTaGTTATCCCATCTGTATTTGAGTTCGTCCTTCAAAAAGCATTTG +
Preference number: 1 (lower is better)
Translates to: GSVEHGGIDPMKIFT*LSHLYLSSSFKKHL
Trigger: CAAATGCTTTTTGAAGGACGAACTCAAATACAGATGGGATAATCAAGTAAATATCTTCATAGGATCAATGCCACCATGTTCAACACTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 90 bp ATGAAGTTAATATATGAATTGATGTTTGATTATTACGAAAAGCAATaGGGTACCTCACAAGGTGGACAGTTTGCTTGTGGGAACTCAGAT +
Preference number: 1 (lower is better)
Translates to: MKLIYELMFDYYEKQ*GTSQGGQFACGNSD
Trigger: ATCTGAGTTCCCACAAGCAAACTGTCCACCTTGTGAGGTACCCCATTGCTTTTCGTAATAATCAAACATCAATTCATATATTAACTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGGAAGGCCCGCAGCCTaGTTCCCCAGTGTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFGRPAA*FPSVLQ
Trigger: CTGGAGCACACTGGGGAAGCAGGCTGCGGGCCTTCC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAGGAAGGCCCGCAGCCTaGTTCCCCAGTGTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLGRPAA*FPSVLQ
Trigger: CTGGAGCACACTGGGGAAGCAGGCTGCGGGCCTTCC...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTAACTCCCCCTCTAGCTaGAGGACCCATGGTTCCCTT +
Preference number: 2 (lower is better)
Translates to: KVYLPPSWRPCVALVLQANSPSS*RTHGSL
Trigger: AAGGGAACCATGGGTCCTCCAGCTAGAGGGGGAGTT...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTATCCCTCGGATAGGATaGAACTCAGAAGTGAGGAGT +
Preference number: 2 (lower is better)
Translates to: GVSTTILAPMCSPCATSSIPRIG*NSEVRS
Trigger: ACTCCTCACTTCTGAGTTTCATCCTATCCGAGGGAT...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCCCTGCTTCCCCAGTGTaGTCCAGGGCAGAACTAATG +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFPASPV*SRAELM
Trigger: CATTAGTTCTGCCCTGGAGCACACTGGGGAAGCAGG...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGATGAAACTCAGAAGTaGGGAGTCAGAGCCAATTTT +
Preference number: 2 (lower is better)
Translates to: GVSTTILAPMCSPCATSSDETQK*GVRANF
Trigger: AAAATTGGCTCTGACTCCTCACTTCTGAGTTTCATC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGCTTTTATTTCTCTATaGCCCTACTTTGCATGGACT +
Preference number: 2 (lower is better)
Translates to: GVSTTILAPMCSPCATSSAFISL*PYFAWT
Trigger: AGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGCCTCACAGGACTTGTaGAATAGTCTTAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: GVSTTILAPMCSPCATSSASQDL*NSLKKQ
Trigger: TTGTTTCTTAAGACTATTTCACAAGTCCTGTGAGGC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTCCATTTACTCTAAGTaGCTGCTACATAGGCACTGT +
Preference number: 2 (lower is better)
Translates to: KVYLPPSWRPCVALVLQASIYSK*LLHRHC
Trigger: ACAGTGCCTATGTAGCAGGCACTTAGAGTAAATGGA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTTGAAAATCCCAAATTaGCAGGAAAGCTTGCAGTCT +
Preference number: 2 (lower is better)
Translates to: GVSTTILAPMCSPCATSSLKIPN*QESLQS
Trigger: AGACTGCAAGCTTTCCTGCCAATTTGGGATTTTCAA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTTTCAGAGATCCCTGTaGTTTCATGGACATAATTTC +
Preference number: 2 (lower is better)
Translates to: GVSTTILAPMCSPCATSSFQRSL*FHGHNF
Trigger: GAAATTATGTCCATGAAATCACAGGGATCTCTGAAA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGATGAAACTCAGAAGTaGGGAGTCAGAGCCAATTTT +
Preference number: 2 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVADETQK*GVRANF
Trigger: AAAATTGGCTCTGACTCCTCACTTCTGAGTTTCATC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGATCCTCCTGAAGGATaGATGAATAGCCAGTTAGAG +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFDPPEG*MNSQLE
Trigger: CTCTAACTGGCTATTCATTCATCCTTCAGGAGGATC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGTGCTACAAGCTCTCTaGAAAGACAATGCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAVLQAL*KDNAQL
Trigger: CAGCTGGGCATTGTCTTTTCAGAGAGCTTGTAGCAC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTCTATGACCCTACTTTaGATGGACTGTATTATCCTA +
Preference number: 2 (lower is better)
Translates to: GVSTTILAPMCSPCATSSSMTLL*MDCIIL
Trigger: TAGGATAATACAGTCCATGCAAAGTAGGGTCATAGA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTTTACTCTAAGTGCCTaGTACATAGGCACTGTATGT +
Preference number: 2 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAFTLSA*YIGTVC
Trigger: ACATACAGTGCCTATGTAGCAGGCACTTAGAGTAAA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCACTGCCAGGTGATAGCTaGATGTCAGGGTCAGATTCT +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSALPGDS*MSGSDS
Trigger: AGAATCTGACCCTGACATGCAGCTATCACCTGGCAG...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCCCTTCAGAGACTCAGTaGAATAGGAAGATCAGAGTG +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFPSETQ*NRKIRV
Trigger: CACTCTGATCTTCCTATTCCACTGAGTCTCTGAAGG...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTACCTTACCATTTACTaGGTACTTGCAGGGCAATAT +
Preference number: 2 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAYLTIY*VLAGQY
Trigger: ATATTGCCCTGCAAGTACCCAGTAAATGGTAAGGTA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTAACTCCCCCTCTAGCTaGAGGACCCATGGTTCCCTT +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQINSPSS*RTHGSL
Trigger: AAGGGAACCATGGGTCCTCCAGCTAGAGGGGGAGTT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGGGTACCTCACAAGGTaGACAGTTTGCTTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAGYLTR*TVCLWE
Trigger: TTCCCACAAGCAAACTGTCCACCTTGTGAGGTACCC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTTCCCATACAGCATCTaGTTAAAAAGAGCGAGCAAG +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFFPYSI*LKRASK
Trigger: CTTGCTCGCTCTTTTTAATCAGATGCTGTATGGGAA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAACACATTGCTCTAACTaGTTCTACCAGCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLTHCSN*FYQPSS
Trigger: AGAGGAAGGCTGGTAGAAGCAGTTAGAGCAATGTGT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTCTCTGAAAAGACAATaGCCAGCTGAGACAAATGTG +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSLKRQ*PAETNV
Trigger: CACATTTGTCTCAGCTGGGCATTGTCTTTTCAGAGA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATTTGACGAGTCTCTCTaGCAGGTGATAGCTGCATGT +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAFDESL*QVIAAC
Trigger: ACATGCAGCTATCACCTGGCAGAGAGACTCGTCAAA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCAGAAGAGAACCATGTTaGAACCACCTAGTATGGATG +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFRREPC*NHLVWM
Trigger: CATCCATACTAGGTGGTTCCAACATGGTTCTCTTCT...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGGTTGTCCCAGTTACTaGGAAATGCTATATAAGGGA +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFGCPSY*EMLYKG
Trigger: TCCCTTATATAGCATTTCCCAGTAACTGGGACAACC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTATGCCCTAATACAATaGGCTTTCTCCATCTTATTC +
Preference number: 2 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAYALIQ*AFSILF
Trigger: GAATAAGATGGAGAAAGCTCATTGTATTAGGGCATA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTGTGCTACAAGCTCTCTaGAAAGACAATGCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIVLQAL*KDNAQL
Trigger: CAGCTGGGCATTGTCTTTTCAGAGAGCTTGTAGCAC...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAGAAACATGCATTTCCTaGGACTTCCAACTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLETCIS*DFQLSS
Trigger: ACTGGAAAGTTGGAAGTCTCAGGAAATGCATGTTTC...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAATTAGCAATTCAAAGTaGGCACTCTGCCTACGGAAC +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAISNSK*ALCLRN
Trigger: GTTCCGTAGGCAGAGTGCTCACTTTGAATTGCTAAT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTTAAAGAAAAATGGGTaGCATGTTGGGAAGGTCAAC +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFLKKNG*HVGKVN
Trigger: GTTGACCTTCCCAACATGGCACCCATTTTTCTTTAA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTCTCCATCTTATTCATaGAAACTCCAAGTAGTGCTA +
Preference number: 2 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVASPSYS*KLQVVL
Trigger: TAGCACTACTTGGAGTTTCCATGAATAAGATGGAGA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCACCTTCAGAGACTCAGTaGAATAGGAAGATCAGAGTG +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAPSETQ*NRKIRV
Trigger: CACTCTGATCTTCCTATTCCACTGAGTCTCTGAAGG...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTATGCTATCACAGGAATaGGCATATGTTTGTATATTG +
Preference number: 2 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAMLSQE*AYVCIL
Trigger: CAATATACAAACATATGCCCATTCCTGTGATAGCAT...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CAA 90 bp TTGATTATTACGAAAAGCAATGGGGTACCTCACAAGGTGGACAGTTaGCTTGTGGGAACTCAGATAGGTTCTAAAGCCCATTCCTCACAA +
Preference number: 2 (lower is better)
Translates to: LIITKSNGVPHKVDS*LVGTQIGSKAHSSQ
Trigger: TTGTGAGGAATGGGCTTTAGAACCTATCTGAGTTCCCACAAGCAAACTGTCCACCTTGTGAGGTACCCCATTGCTTTTCGTAATAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATGTCAAATATCACAATaGCACGAAGGAGGAAGTAAC +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLCQISQ*HEGGSN
Trigger: GTTACTTCCTCCTTCGTGTCATTGTGATATTTGACA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATTTTCCCAGTATGGCTaGAAGTCAATATTGAGGTCA +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLFSQYG*KSILRS
Trigger: TGACCTCAATATTGACTTTCAGCCATACTGGGAAAA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATTAGGTGGCACTCCATaGAAAGTAAGTTTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSALGGTP*KVSFPS
Trigger: ACTGGGAAAACTTACTTTTCATGGAGTGCCACCTAA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAATTGGCAGGAAAGCTTaGAGTCTTTTTCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLIGRKA*SLFLLP
Trigger: AGGAAGAAGAAAAAGACTGCAAGCTTTCCTGCCAAT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAAACAAGGTTTCTGGGTaGATATCATTAGCAGCAGTA +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLNKVSG*ISLAAV
Trigger: TACTGCTGCTAATGATATGCACCCAGAAACCTTGTT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATCCATTTACTCTAAGTaGCTGCTACATAGGCACTGT +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSASIYSK*LLHRHC
Trigger: ACAGTGCCTATGTAGCAGGCACTTAGAGTAAATGGA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATCTCTGAAAAGACAATaGCCAGCTGAGACAAATGTG +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSASLKRQ*PAETNV
Trigger: CACATTTGTCTCAGCTGGGCATTGTCTTTTCAGAGA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAACATTCACTGTTAGGTaGCACTCCATGAAAAGTAAG +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLTFTVR*HSMKSK
Trigger: CTTACTTTTCATGGAGTGCCACCTAACAGTGAATGT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATATCCCATCTGTATTTaGGTTCGTCCTTCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAYPICI*VRPSKS
Trigger: GCTTTTTGAAGGACGAACTCAAATACAGATGGGATA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAACTCCTTTGATTTCCTaGTGTAGATTGGGTAAAAGT +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLTPLIS*CRLGKS
Trigger: ACTTTTACCCAATCTACAGCAGGAAATCAAAGGAGT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTACATGTATGCTATTTaGTATACCACAGGTACATAC +
Preference number: 2 (lower is better)
Translates to: KRGPGTELGGVATFQEHFYMYAI*YTTGTY
Trigger: GTATGTACCTGTGGTATACCAAATAGCATACATGTA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATACGGAACTCCTGTTTaGTTGAGTGACCAAAGATTA +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAYGTPV*LSDQRL
Trigger: TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTTCCCATACAGCATCTaGTTAAAAAGAGCGAGCAAG +
Preference number: 2 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIFPYSI*LKRASK
Trigger: CTTGCTCGCTCTTTTTAATCAGATGCTGTATGGGAA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATCCTGTTTGGTTGAGTaGCCAAAGATTAAAAGATTG +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSASCLVE*PKIKRL
Trigger: CAATCTTTTAATCTTTGGTCACTCAACCAAACAGGA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACATTTACTGGGTACTTaGAGGGCAATATTATTTAAG +
Preference number: 2 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLHLLGT*RAILFK
Trigger: CTTAAATAATATTGCCCTGCAAGTACCCAGTAAATG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTCTGGTCGTTATAATTTaGTTTGACGAGTCTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQILVVII*FDESLC
Trigger: GCAGAGAGACTCGTCAAAGCAAATTATAACGACCAG...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTATTACGAAAAGCAATaGGGTACCTCACAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIYYEKQ*GTSQGG
Trigger: TCCACCTTGTGAGGTACCCCATTGCTTTTCGTAATA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CAA 90 bp TTAGCAATTCAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTaGAGTGACCAAAGATTAAAAGATTGTGTCGTTGGATCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: LAIQSEHSAYGTPVW*SDQRLKDCVVGSVK
Trigger: TTTTACAGATCCAACGACACAATCTTTTAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTGAATTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAATCCCTCGGATAGGATaGAACTCAGAAGTGAGGAGT +
Preference number: 2 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKIPRIG*NSEVRS
Trigger: ACTCCTCACTTCTGAGTTTCATCCTATCCGAGGGAT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTGCAATAGACTCAGATTaGTTAGAGTGCAGTTTCAAC +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIAIDSD*LECSFN
Trigger: GTTGAAACTGCACTCTAATCAATCTGAGTCTATTGC...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAAAATTAGCTATGATTaGCCAACTGTGGATGACTAT +
Preference number: 2 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAKISYD*PTVDDY
Trigger: ATAGTCATCCACAGTTGGGCAATCATAGCTAATTTT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTATGCCCTAATACAATaGGCTTTCTCCATCTTATTC +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIYALIQ*AFSILF
Trigger: GAATAAGATGGAGAAAGCTCATTGTATTAGGGCATA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTAGAGGAGGTAGCTACTaGAAATGTTTCAAAATTCCA +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIRGGSY*KCFKIP
Trigger: TGGAATTTTGAAACATTTTCAGTAGCTACCTCCTCT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAATGCAGAAACTTTGTGTaGAACTTTTGCCTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKCRNFV*NFCLCL
Trigger: AAGGCAGAGGCAAAAGTTTCACACAAAGTTTCTGCA...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTATGTTTGAATTTGTATaGTATCACAGGAATGGGCAT +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIMFEFV*YHRNGH
Trigger: ATGCCCATTCCTGTGATAGCATACAAATTCAAACAT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTATGCTATCACAGGAATaGGCATATGTTTGTATATTG +
Preference number: 2 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIMLSQE*AYVCIL
Trigger: CAATATACAAACATATGCCCATTCCTGTGATAGCAT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAATTGGCAGGAAAGCTTaGAGTCTTTTTCTTCTTCCT +
Preference number: 2 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKIGRKA*SLFLLP
Trigger: AGGAAGAAGAAAAAGACTGCAAGCTTTCCTGCCAAT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGTCTCCATCTTATTCATaGAAACTCCAAGTAGTGCTA +
Preference number: 2 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKSPSYS*KLQVVL
Trigger: TAGCACTACTTGGAGTTTCCATGAATAAGATGGAGA...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
3UTR-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAATCTATGACCCTACTTTaGATGGACTGTATTATCCTA +
Preference number: 2 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKSMTLL*MDCIIL
Trigger: TAGGATAATACAGTCCATGCAAAGTAGGGTCATAGA...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAACATTTACTGGGTACTTaGAGGGCAATATTATTTAAG +
Preference number: 2 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKHLLGT*RAILFK
Trigger: CTTAAATAATATTGCCCTGCAAGTACCCAGTAAATG...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAATGTTTGAATTTGTATaGTATCACAGGAATGGGCAT +
Preference number: 2 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKMFEFV*YHRNGH
Trigger: ATGCCCATTCCTGTGATAGCATACAAATTCAAACAT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 72 bp TCCAAGGACTCCCTTTTAGTAAACTCCCCCTCTAGCTaGAGGACCCATGGTTCCCTTCTACCTCTTCCCTCC +
Preference number: 3 (lower is better)
Translates to: SKDSLLVNSPSS*RTHGSLLPLPS
Trigger: GGAGGGAAGAGGTAGAAGGGAACCATGGGTCCTCCAGCTAGAGGGGGAGTTTACTAAAAGGGAGTCCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR TCA 72 bp TGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTCTaGAAAGACAATGCCCAGCTGAGACAAATGTGCATA +
Preference number: 3 (lower is better)
Translates to: WRPCVALVLQAL*KDNAQLRQMCI
Trigger: TATGCACATTTGTCTCAGCTGGGCATTGTCTTTTCAGAGAGCTTGTAGCACAAGGGCTACACATGGGCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 72 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTaGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTC +
Preference number: 3 (lower is better)
Translates to: NKKCTKVYLPPS*RPCVALVLQAL
Trigger: GAGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGGGCATTCAATTGTTTaGATTCCCATACAGCATCTG +
Preference number: 3 (lower is better)
Translates to: GVSTTILAPMCSPCATSSGHSIV*IPIQHL
Trigger: CAGATGCTGTATGGGAATCAAAACAATTGAATGCCC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTGATTCTATCCCCTACTaGCGCCTGCCTCCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIDSIPY*RLPPLS
Trigger: GGACAGGGGAGGCAGGCGCAAGTAGGGGATAGAATC...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTCTATGACCCTACTTaGCATGGACTGTATTATCCT +
Preference number: 3 (lower is better)
Translates to: KVYLPPSWRPCVALVLQALYDPT*HGLYYP
Trigger: AGGATAATACAGTCCATGCAAAGTAGGGTCATAGAG...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTTTGAAAATCCCAAATaGGCAGGAAAGCTTGCAGTC +
Preference number: 3 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAFENPK*AGKLAV
Trigger: GACTGCAAGCTTTCCTGCCAATTTGGGATTTTCAAA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGGGCATTCAATTGTTTaGATTCCCATACAGCATCTG +
Preference number: 3 (lower is better)
Translates to: KRGPGTELGGVATFQEHFGHSIV*IPIQHL
Trigger: CAGATGCTGTATGGGAATCAAAACAATTGAATGCCC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTGCTCAAGCTGTGTCATaGTTCTTCCCTGTAGACCCG +
Preference number: 3 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIAQAVS*FFPVDP
Trigger: CGGGTCTACAGGGAAGAACAATGACACAGCTTGAGC...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCCTCTATGACCCTACTTaGCATGGACTGTATTATCCT +
Preference number: 3 (lower is better)
Translates to: KRGPGTELGGVATFQEHFLYDPT*HGLYYP
Trigger: AGGATAATACAGTCCATGCAAAGTAGGGTCATAGAG...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAATTCCACCCACTCCTTaGATTTCCTGCTGTAGATTG +
Preference number: 3 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLIPPTP*ISCCRL
Trigger: CAATCTACAGCAGGAAATCAAAGGAGTGGGTGGAAT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCAAAATGGGTGCCATGTaGGGAAGGTCAACTTTAAAG +
Preference number: 3 (lower is better)
Translates to: KRGPGTELGGVATFQEHFKMGAM*GRSTLK
Trigger: CTTTAAAGTTGACCTTCCCAACATGGCACCCATTTT...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGTGTGGGTTGCATGCTaGTTTTCTCGAGAAGAGAAC +
Preference number: 3 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAVWVAC*FSREEN
Trigger: GTTCTCTTCTCGAGAAAACAAGCATGCAACCCACAC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR GCA 72 bp TGTAGCCCTTGTGCTACAAGCTCTCTGAAAAGACAATaGCCAGCTGAGACAAATGTGCATAGGCTAAGGATA +
Preference number: 3 (lower is better)
Translates to: CSPCATSSLKRQ*PAETNVHRLRI
Trigger: TATCCTTAGCCTATGCACATTTGTCTCAGCTGGGCATTGTCTTTTCAGAGAGCTTGTAGCACAAGGGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 72 bp CACCCACTACCAGCCCTATTCCCTTCAGAGACTCAGTaGAATAGGAAGATCAGAGTGTTTACAGATAGTATG +
Preference number: 3 (lower is better)
Translates to: HPLPALFPSETQ*NRKIRVFTDSM
Trigger: CATACTATCTGTAAACACTCTGATCTTCCTATTCCACTGAGTCTCTGAAGGGAATAGGGCTGGTAGTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGGAATGGGCATATGTTaGTATATTGTATATGGCAAG +
Preference number: 3 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAGMGIC*YIVYGK
Trigger: CTTGCCATATACAATATACAAACATATGCCCATTCC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAGAAAAGTGTGTGGGTaGCATGCTTGTTTTCTCGAG +
Preference number: 3 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSARKVCG*HACFLE
Trigger: CTCGAGAAAACAAGCATGCAACCCACACACTTTTCT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTCACAAGGTGGACAGTTaGCTTGTGGGAACTCAGATA +
Preference number: 3 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIHKVDS*LVGTQI
Trigger: TATCTGAGTTCCCACAAGCAAACTGTCCACCTTGTG...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTTATCCCATCTGTATTaGAGTTCGTCCTTCAAAAAG +
Preference number: 3 (lower is better)
Translates to: KRGPGTELGGVATFQEHFLSHLY*SSSFKK
Trigger: CTTTTTGAAGGACGAACTCAAATACAGATGGGATAA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTATGTCGGTGTGTTTTaGGTTGTCCCAGTTACTGGG +
Preference number: 3 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIYVGVF*VVPVTG
Trigger: CCCAGTAACTGGGACAACCAAAAACACACCGACATA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR TCA 72 bp GGACACTGTGCATTATTTTCTATTAGCAATTCAAAGTaGGCACTCTGCCTACGGAACTCCTGTTTGGTTGAG +
Preference number: 3 (lower is better)
Translates to: GHCALFSISNSK*ALCLRNSCLVE
Trigger: CTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTGAATTGCTAATAGAAAATAATGCACAGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGCTCAAGCTGTGTCATaGTTCTTCCCTGTAGACCCG +
Preference number: 3 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKAQAVS*FFPVDP
Trigger: CGGGTCTACAGGGAAGAACAATGACACAGCTTGAGC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTATTCCACCCACTCCTTaGATTTCCTGCTGTAGATTG +
Preference number: 3 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIIPPTP*ISCCRL
Trigger: CAATCTACAGCAGGAAATCAAAGGAGTGGGTGGAAT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCACACATGTGTAGATCCTaGTCAGTCATGAGTTTTCTA +
Preference number: 3 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAHMCRS*SVMSFL
Trigger: TAGAAAACTCATGACTGACAAGGATCTACACATGTG...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR GCA 72 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTaGATGGACTGTATTATCCTAGGAAACTATTGGGGT +
Preference number: 3 (lower is better)
Translates to: LRACFYFSMTLL*MDCIILGNYWG
Trigger: ACCCCAATAGTTTCCTAGGATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 72 bp ATTCAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTaGTTGAGTGACCAAAGATTAAAAGATTGTGTCGTT +
Preference number: 3 (lower is better)
Translates to: IQSEHSAYGTPV*LSDQRLKDCVV
Trigger: AACGACACAATCTTTTAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR TCA 72 bp GCCACTTATAGGAATTTCAGGAGAGGAGGTAGCTACTaGAAATGTTTCAAAATTCCATCTGCATTCAGTCTC +
Preference number: 3 (lower is better)
Translates to: ATYRNFRRGGSY*KCFKIPSAFSL
Trigger: GAGACTGAATGCAGATGGAATTTTGAAACATTTTCAGTAGCTACCTCCTCTCCTGAAATTCCTATAAGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTTTTCCAGAACCCAGTaGACAAATAGGACAAAGTTA +
Preference number: 3 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIFSRTQ*TNRTKL
Trigger: TAACTTTGTCCTATTTGTCAACTGGGTTCTGGAAAA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 72 bp CTAATATGTCGGTGTGTTTTTGGTTGTCCCAGTTACTaGGAAATGCTATATAAGGGATTAATGGGGAAACTT +
Preference number: 3 (lower is better)
Translates to: LICRCVFGCPSY*EMLYKGLMGKL
Trigger: AAGTTTCCCCATTAATCCCTTATATAGCATTTCCCAGTAACTGGGACAACCAAAAACACACCGACATATTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR GCA 72 bp AGTGGAATAGGAAGATCAGAGTGTTTACAGATAGTATaGCCTAATACAATGAGCTTTCTCCATCTTATTCAT +
Preference number: 3 (lower is better)
Translates to: SGIGRSECLQIV*PNTMSFLHLIH
Trigger: ATGAATAAGATGGAGAAAGCTCATTGTATTAGGGCATACTATCTGTAAACACTCTGATCTTCCTATTCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CCA 72 bp TTCTATGACCAAAAATTAGCTATGATTGCCCAACTGTaGATGACTATAGAGCATTATAACAAGTCCCACAAA +
Preference number: 3 (lower is better)
Translates to: FYDQKLAMIAQL*MTIEHYNKSHK
Trigger: TTTGTGGGACTTGTTATAATGCTCTATAGTCATCCACAGTTGGGCAATCATAGCTAATTTTTGGTCATAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTCGTGCCAGTCGGCGTaGAGCGCGCTGGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSSCQSA*SALVPA
Trigger: TGCTGGGACCAGCGCGCTGCACGCCGACTGGCACGA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTCGTGCCAGTCGGCGTaGAGCGCGCTGGTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVASCQSA*SALVPA
Trigger: TGCTGGGACCAGCGCGCTGCACGCCGACTGGCACGA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACGGCGTGCAGCGCGCTaGTCCCAGCACTCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLRRAAR*SQHSSG
Trigger: GCCCGAGGAGTGCTGGGACCAGCGCGCTGCACGCCG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGGTGCTGGCATCATCTaGCCAGGCCAGAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSGAGII*PGQRKG
Trigger: GCCCTTTCTCTGGCCTGGGCAGATGATGCCAGCACC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTCTCCTGGCTTCTGCGTaGGGACCCACTGCATCATGG +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSLLASA*GPTASW
Trigger: CCATGATGCAGTGGGTCCGCACGCAGAAGCCAGGAG...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGTGAGGGGGATGCTGTaGATGCTCTCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSVRGML*MLSGRV
Trigger: AACTCTGCCGGAGAGCATGCACAGCATCCCCCTCAC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCACTCCTCGGGCAGGCTaGCAGGCTGCTGCCGCTAAT +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVATPRAG*QAAAAN
Trigger: ATTAGCGGCAGCAGCCTGCCAGCCTGCCCGAGGAGT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTCCCCCAACAATGTTCTaGGAAGGTGTCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSPPTMF*EGVTRA
Trigger: TGCCCTGGTGACACCTTCTCAGAACATTGTTGGGGG...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGAGACGAGGCCATCGTaGCAGTCGGCGTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAETRPS*QSACSA
Trigger: CGCGCTGCACGCCGACTGGCACGATGGCCTCGTCTC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGGGGGATGCTGTGCATaGTCTCCGGCAGAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAGGCCA*SPAELP
Trigger: TGGCAACTCTGCCGGAGAGCATGCACAGCATCCCCC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTCCTGCTTCCCCAGTGTaGTCCAGGGCAGAACTAATG +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSPASPV*SRAELM
Trigger: CATTAGTTCTGCCCTGGAGCACACTGGGGAAGCAGG...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTATTCTATCCCCTACTTaGGCCTGCCTCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAILSPT*ACLPCP
Trigger: GGGACAGGGGAGGCAGGCGCAAGTAGGGGATAGAAT...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGGTGCTGGCATCATCTaGCCAGGCCAGAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFGAGII*PGQRKG
Trigger: GCCCTTTCTCTGGCCTGGGCAGATGATGCCAGCACC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTGCGTGCGGACCCACTaGATCATGGCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVACVRTH*IMAGRA
Trigger: AGCTCTTCCTGCCATGATGCAGTGGGTCCGCACGCA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCATTCTATCCCCTACTTaGGCCTGCCTCCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAILSPT*ACLPCP
Trigger: GGGACAGGGGAGGCAGGCGCAAGTAGGGGATAGAAT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGTTTCTCGGGGTCTGTaGTGTTGGCCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFVSRGL*CWPRVL
Trigger: CAGCACCCTGGGCCAACACCACAGACCCCGAGAAAC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTTCTCTGAGGCCACTTaGCACCCCTTTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAFSEAT*HPFDHS
Trigger: ACTGTGGTCAAAGGGGTGGCAAGTGGCCTCAGAGAA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGCGGCGTGCAGCGCGCTaGTCCCAGCACTCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKRRAAR*SQHSSG
Trigger: GCCCGAGGAGTGCTGGGACCAGCGCGCTGCACGCCG...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR CCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTCGGGGTCTCTGGGCTTaGTGGAAATTCGAAGATCAA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSRGLWA*WKFEDQ
Trigger: TTGATCTTCGAATTTCCACCAAGCCCAGAGACCCCG...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAGTTTCTCGGGGTCTGTaGTGTTGGCCCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLVSRGL*CWPRVL
Trigger: CAGCACCCTGGGCCAACACCACAGACCCCGAGAAAC...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGGGTACCTCACAAGGTaGACAGTTTGCTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSGYLTR*TVCLWE
Trigger: TTCCCACAAGCAAACTGTCCACCTTGTGAGGTACCC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTGGACAGTTTCTGGCTaGTCAGGACCTACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAWTVSG*SGPTGE
Trigger: CTCTCCAGTAGGTCCTGAGCAGCCAGAAACTGTCCA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCGGAAGGCCCGCAGCCTaGTTCCCCAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIGRPAA*FPSVLQ
Trigger: CTGGAGCACACTGGGGAAGCAGGCTGCGGGCCTTCC...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGCCAGGTGATAGCTaGATGTCAGGGTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQALPGDS*MSGSDS
Trigger: AGAATCTGACCCTGACATGCAGCTATCACCTGGCAG...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTGGGTACCTCACAAGGTaGACAGTTTGCTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAGYLTR*TVCLWE
Trigger: TTCCCACAAGCAAACTGTCCACCTTGTGAGGTACCC...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTGAACACAAGGGTATaGAGGGAGGTAGATCTCGCC +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVALNTRV*REVDLA
Trigger: GGCGAGATCTACCTCCCTCCATACCCTTGTGTTCAG...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAGCTCGTTTTTCCCCTaGGACGAGGCCATCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSASSFFP*DEAIVP
Trigger: TGGCACGATGGCCTCGTCTCAGGGGAAAAACGAGCT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTAAGCTGAAGGAATCATaGGACCCTGGAATGGCTAAA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSKLKES*DPGMAK
Trigger: TTTAGCCATTCCAGGGTCTCATGATTCCTTCAGCTT...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTACTACCTCCTTATGGTaGTCTGTGAGGAATGCATTG +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSTTSLW*SVRNAL
Trigger: CAATGCATTCCTCACAGATCACCATAAGGAGGTAGT...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTTCTCTGAGGCCACTTaGCACCCCTTTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFFSEAT*HPFDHS
Trigger: ACTGTGGTCAAAGGGGTGGCAAGTGGCCTCAGAGAA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAAACTCCCCCTCTAGCTaGAGGACCCATGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLNSPSS*RTHGSL
Trigger: AAGGGAACCATGGGTCCTCCAGCTAGAGGGGGAGTT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCATCAATGTAGAAGCTaGAGGAATCATGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAHQCRS*RNHETL
Trigger: CAGGGTCTCATGATTCCTTCAGCTTCTACATTGATG...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGTGCTACAAGCTCTCTaGAAAGACAATGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFVLQAL*KDNAQL
Trigger: CAGCTGGGCATTGTCTTTTCAGAGAGCTTGTAGCAC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTATTAGCAATTCAAAGTaGGCACTCTGCCTACGGAAC +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAISNSK*ALCLRN
Trigger: GTTCCGTAGGCAGAGTGCTCACTTTGAATTGCTAAT...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCGTTATAATTTGCTTTaGCGAGTCTCTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQARYNLL*RVSLPG
Trigger: ACCTGGCAGAGAGACTCGTCAAAGCAAATTATAACG...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGAGACGAGGCCATCGTaGCAGTCGGCGTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKETRPS*QSACSA
Trigger: CGCGCTGCACGCCGACTGGCACGATGGCCTCGTCTC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTCTCTCTCCTGGCTTCTaGGTGCGGACCCACTGCATC +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQILSPGF*VRTHCI
Trigger: GATGCAGTGGGTCCGCACGCAGAAGCCAGGAGAGAG...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTCTCTGAAAAGACAATaGCCAGCTGAGACAAATGTG +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSSLKRQ*PAETNV
Trigger: CACATTTGTCTCAGCTGGGCATTGTCTTTTCAGAGA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCCTGCCAGGTGATAGCTaGATGTCAGGGTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFLPGDS*MSGSDS
Trigger: AGAATCTGACCCTGACATGCAGCTATCACCTGGCAG...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTGCTCAGGACCTACTaGAGAGGCTTCATCAATGTA +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVALLRTY*RGFINV
Trigger: TACATTGATGAAGCCTCTCCAGTAGGTCCTGAGCAG...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTATCTACCACCATCTTaGCGCCCATGTGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFYLPPS*RPCVAL
Trigger: AAGGGCTACACATGGGCGCCAAGATGGTGGTAGATA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTATTACGAAAAGCAATaGGGTACCTCACAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSYYEKQ*GTSQGG
Trigger: TCCACCTTGTGAGGTACCCCATTGCTTTTCGTAATA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGGTTGTCCCAGTTACTaGGAAATGCTATATAAGGGA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSGCPSY*EMLYKG
Trigger: TCCCTTATATAGCATTTCCCAGTAACTGGGACAACC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CAA 72 bp AAACAAAAAGTGCACCAAGGTGTATCTACCACCATCTaGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KQKVHQGVSTTI*APMCSPCATSS
Trigger: AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTGCAGAAACTTTGTGTaGAACTTTTGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQACRNFV*NFCLCL
Trigger: AAGGCAGAGGCAAAAGTTTCACACAAAGTTTCTGCA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGATCCTCCTGAAGGATaGATGAATAGCCAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVADPPEG*MNSQLE
Trigger: CTCTAACTGGCTATTCATTCATCCTTCAGGAGGATC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTTAGGTGGCACTCCATaGAAAGTAAGTTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQALGGTP*KVSFPS
Trigger: ACTGGGAAAACTTACTTTTCATGGAGTGCCACCTAA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCGTGAGGGGGATGCTGTaGATGCTCTCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIVRGML*MLSGRV
Trigger: AACTCTGCCGGAGAGCATGCACAGCATCCCCCTCAC...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATGGACAGTTTCTGGCTaGTCAGGACCTACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAWTVSG*SGPTGE
Trigger: CTCTCCAGTAGGTCCTGAGCAGCCAGAAACTGTCCA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTATTCCAGCTCCTAGCTaGCCAGTAAAATTCATTGTC +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAIPAPS*PVKFIV
Trigger: GACAATGAATTTTACTGGCCAGCTAGGAGCTGGAAT...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGGACCCACTGCATCATaGCAGGAAGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAGPTAS*QEELFL
Trigger: CAGAAAGAGCTCTTCCTGCCATGATGCAGTGGGTCC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCCTTCAGAGACTCAGTaGAATAGGAAGATCAGAGTG +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAPSETQ*NRKIRV
Trigger: CACTCTGATCTTCCTATTCCACTGAGTCTCTGAAGG...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACTAACCATTTCCGCATaGGCTTTTTGGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLLTISA*AFWPQF
Trigger: GAACTGTGGCCAAAAAGCTCATGCGGAAATGGTTAG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGTAAAATTCATTGTCTaGGTGGCTAACCATTTCCGC +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAVKFIV*VANHFR
Trigger: GCGGAAATGGTTAGCCACTCAGACAATGAATTTTAC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATTCCACCCACTCCTTTaGTTTCCTGCTGTAGATTGG +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLFHPLL*FPAVDW
Trigger: CCAATCTACAGCAGGAAATCAAAGGAGTGGGTGGAA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCATTAGCAATTCAAAGTaGGCACTCTGCCTACGGAAC +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFISNSK*ALCLRN
Trigger: GTTCCGTAGGCAGAGTGCTCACTTTGAATTGCTAAT...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCAAGAGGTCCTGGTACTaGGTTAGGCGGTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIKRSWY*VRRCCH
Trigger: GTGGCAACACCGCCTAACTCAGTACCAGGACCTCTT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAGTGATCTGTGAGGAATaGATTGATCTCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLVICEE*IDLLKA
Trigger: GGCCTTGAGGAGATCAATGCATTCCTCACAGATCAC...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGCTCTCTCCTGGCTTCTaGGTGCGGACCCACTGCATC +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKLSPGF*VRTHCI
Trigger: GATGCAGTGGGTCCGCACGCAGAAGCCAGGAGAGAG...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR GCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTACTCCTTTGATTTCCTaGTGTAGATTGGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSTPLIS*CRLGKS
Trigger: ACTTTTACCCAATCTACAGCAGGAAATCAAAGGAGT...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCAGTGTGTGGGTTGCATaGTTGTTTTCTCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSVWVA*LFSREE
Trigger: CTCTTCTCGAGAAAACAAGCATGCAACCCACACACT...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCAAATGTCACCAGCTCTaGAAATTCCCATCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFKCHQL*KFPSSR
Trigger: TCTGGAGGATGGGAATTTGCAGAGCTGGTGACATTT...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAACTCCTCGGGCAGGCTaGCAGGCTGCTGCCGCTAAT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKTPRAG*QAAAAN
Trigger: ATTAGCGGCAGCAGCCTGCCAGCCTGCCCGAGGAGT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAATTCTGGACAGTTTCTaGCTGCTCAGGACCTACTGG +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAILDSF*LLRTYW
Trigger: CCAGTAGGTCCTGAGCAGCCAGAAACTGTCCAGAAT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCATTCCAGCTCCTAGCTaGCCAGTAAAATTCATTGTC +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAIPAPS*PVKFIV
Trigger: GACAATGAATTTTACTGGCCAGCTAGGAGCTGGAAT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCACATTGTCGGGGTCTCTaGGCTTGGTGGAAATTCGAA +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAHCRGL*AWWKFE
Trigger: TTCGAATTTCCACCAAGCCCAGAGACCCCGACAATG...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTCTCCATCTTATTCATaGAAACTCCAAGTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GVSTTILAPMCSPCATSSSPSYS*KLQVVL
Trigger: TAGCACTACTTGGAGTTTCCATGAATAAGATGGAGA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CAA 72 bp ACGAAAAGCAATGGGGTACCTCACAAGGTGGACAGTTaGCTTGTGGGAACTCAGATAGGTTCTAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: TKSNGVPHKVDS*LVGTQIGSKAH
Trigger: ATGGGCTTTAGAACCTATCTGAGTTCCCACAAGCAAACTGTCCACCTTGTGAGGTACCCCATTGCTTTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTCCCATAAAAGTGGTTaGAGTCCAAGAACACTACCT +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSHKSG*SPRTLP
Trigger: AGGTAGTGTTCTTGGACTTCAACCACTTTTATGGGA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTCAGTGATGGATGCTTaGAGAAACTGGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSVMDA*RNWISF
Trigger: GAAACTGATCCAGTTTCTTCAAGCATCCATCACTGA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTATGCCCTAATACAATaGGCTTTCTCCATCTTATTC +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAYALIQ*AFSILF
Trigger: GAATAAGATGGAGAAAGCTCATTGTATTAGGGCATA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTGCAGAAACTTTGTGTaGAACTTTTGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFCRNFV*NFCLCL
Trigger: AAGGCAGAGGCAAAAGTTTCACACAAAGTTTCTGCA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGCAATAGACTCAGATTaGTTAGAGTGCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAAIDSD*LECSFN
Trigger: GTTGAAACTGCACTCTAATCAATCTGAGTCTATTGC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTGTAAGCAGGAGTCATaGGATGGACATGTTATATTA +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQACKQES*DGHVIL
Trigger: TAATATAACATGTCCATCTCATGACTCCTGCTTACA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAACTCCTGGCTTCTGCGTaGGGACCCACTGCATCATGG +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKLLASA*GPTASW
Trigger: CCATGATGCAGTGGGTCCGCACGCAGAAGCCAGGAG...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAAGTGTGTGGGTTGCATaGTTGTTTTCTCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLSVWVA*LFSREE
Trigger: CTCTTCTCGAGAAAACAAGCATGCAACCCACACACT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGGTCTCTGGGCTTGGTaGAAATTCGAAGATCAAAAT +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFGLWAW*KFEDQN
Trigger: ATTTTGATCTTCGAATTTCCACCAAGCCCAGAGACC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCGGACCCACTGCATCATaGCAGGAAGAGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIGPTAS*QEELFL
Trigger: CAGAAAGAGCTCTTCCTGCCATGATGCAGTGGGTCC...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCAGTGCTATCAAGTGTTaGCTTCTCCTTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVASAIKC*LLLHQR
Trigger: TCTTTGATGAAGGAGAAGCCAACACTTGATAGCACT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACCTTCAGAGACTCAGTaGAATAGGAAGATCAGAGTG +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLPSETQ*NRKIRV
Trigger: CACTCTGATCTTCCTATTCCACTGAGTCTCTGAAGG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTATTACGAAAAGCAATaGGGTACCTCACAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFYYEKQ*GTSQGG
Trigger: TCCACCTTGTGAGGTACCCCATTGCTTTTCGTAATA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAATGTCGGTGTGTTTTTaGTTGTCCCAGTTACTGGGA +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLMSVCF*LSQLLG
Trigger: TCCCAGTAACTGGGACAACCAAAAACACACCGACAT...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CAA 72 bp GGGTTGCATGCTTGTTTTCTCGAGAAGAGAACCATGTaGGAACCACCTAGTATGGATGGGCCTTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GLHACFLEKRTM*EPPSMDGPLKA
Trigger: AGCTTTTAAAGGCCCATCCATACTAGGTGGTTCCAACATGGTTCTCTTCTCGAGAAAACAAGCATGCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAAGCTCGTTTTTCCCCTaGGACGAGGCCATCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKSSFFP*DEAIVP
Trigger: TGGCACGATGGCCTCGTCTCAGGGGAAAAACGAGCT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATTCCCATACAGCATCTaGTTAAAAAGAGCGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLFPYSI*LKRASK
Trigger: CTTGCTCGCTCTTTTTAATCAGATGCTGTATGGGAA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTTTCAGAGATCCCTGTaGTTTCATGGACATAATTTC +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAFQRSL*FHGHNF
Trigger: GAAATTATGTCCATGAAATCACAGGGATCTCTGAAA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGATCCTCCTGAAGGATaGATGAATAGCCAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSADPPEG*MNSQLE
Trigger: CTCTAACTGGCTATTCATTCATCCTTCAGGAGGATC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTTTTCCCAGTATGGCTaGAAGTCAATATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFFSQYG*KSILRS
Trigger: TGACCTCAATATTGACTTTCAGCCATACTGGGAAAA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAATGCGTGCGGACCCACTaGATCATGGCAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKCVRTH*IMAGRA
Trigger: AGCTCTTCCTGCCATGATGCAGTGGGTCCGCACGCA...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTATGTTTGAATTTGTATaGTATCACAGGAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAMFEFV*YHRNGH
Trigger: ATGCCCATTCCTGTGATAGCATACAAATTCAAACAT...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACTGGTCGTTATAATTTaGTTTGACGAGTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLLVVII*FDESLC
Trigger: GCAGAGAGACTCGTCAAAGCAAATTATAACGACCAG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCATTCTGGACAGTTTCTaGCTGCTCAGGACCTACTGG +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIILDSF*LLRTYW
Trigger: CCAGTAGGTCCTGAGCAGCCAGAAACTGTCCAGAAT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTATCTACCACCATCTTaGCGCCCATGTGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIYLPPS*RPCVAL
Trigger: AAGGGCTACACATGGGCGCCAAGATGGTGGTAGATA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CAA 72 bp GTTCTTCCCTGTAGACCCGGACTATTAAACGTTAGGTaGCAGAAACTTTGTGTGAAACTTTTGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLPCRPGLLNVR*QKLCVKLLPLP
Trigger: AGGCAGAGGCAAAAGTTTCACACAAAGTTTCTGCAACCTAACGTTTAATAGTCCGGGTCTACAGGGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGTAAAATTCATTGTCTaGGTGGCTAACCATTTCCGC +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAVKFIV*VANHFR
Trigger: GCGGAAATGGTTAGCCACTCAGACAATGAATTTTAC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATCCCATAAAAGTGGTTaGAGTCCAAGAACACTACCT +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSASHKSG*SPRTLP
Trigger: AGGTAGTGTTCTTGGACTTCAACCACTTTTATGGGA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATCTTTCTTCTCTCAGTaGTGGATGCTTGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLSFFSQ*WMLEET
Trigger: AGTTTCTTCAAGCATCCATCACTGAGAGAAGAAAGA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCATCCCTCGGATAGGATaGAACTCAGAAGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIIPRIG*NSEVRS
Trigger: ACTCCTCACTTCTGAGTTTCATCCTATCCGAGGGAT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAGCAATAGACTCAGATTaGTTAGAGTGCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLAIDSD*LECSFN
Trigger: GTTGAAACTGCACTCTAATCAATCTGAGTCTATTGC...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATATCCCATCTGTATTTaGGTTCGTCCTTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLYPICI*VRPSKS
Trigger: GCTTTTTGAAGGACGAACTCAAATACAGATGGGATA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAAAGAGGTCCTGGTACTaGGTTAGGCGGTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKKRSWY*VRRCCH
Trigger: GTGGCAACACCGCCTAACTCAGTACCAGGACCTCTT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCGTGATCTGTGAGGAATaGATTGATCTCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIVICEE*IDLLKA
Trigger: GGCCTTGAGGAGATCAATGCATTCCTCACAGATCAC...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCAAAATTAGCTATGATTaGCCAACTGTGGATGACTAT +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAKISYD*PTVDDY
Trigger: ATAGTCATCCACAGTTGGGCAATCATAGCTAATTTT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCATGTTTGAATTTGTATaGTATCACAGGAATGGGCAT +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAMFEFV*YHRNGH
Trigger: ATGCCCATTCCTGTGATAGCATACAAATTCAAACAT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATTTACTCTAAGTGCCTaGTACATAGGCACTGTATGT +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLFTLSA*YIGTVC
Trigger: ACATACAGTGCCTATGTAGCAGGCACTTAGAGTAAA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTTTGACGAGTCTCTCTaGCAGGTGATAGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIFDESL*QVIAAC
Trigger: ACATGCAGCTATCACCTGGCAGAGAGACTCGTCAAA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATTGAAAATCCCAAATTaGCAGGAAAGCTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLLKIPN*QESLQS
Trigger: AGACTGCAAGCTTTCCTGCCAATTTGGGATTTTCAA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTACATGTATGCTATTTaGTATACCACAGGTACATAC +
Preference number: 4 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAYMYAI*YTTGTY
Trigger: GTATGTACCTGTGGTATACCAAATAGCATACATGTA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAAACTCCCCCTCTAGCTaGAGGACCCATGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKNSPSS*RTHGSL
Trigger: AAGGGAACCATGGGTCCTCCAGCTAGAGGGGGAGTT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATACGGAACTCCTGTTTaGTTGAGTGACCAAAGATTA +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLYGTPV*LSDQRL
Trigger: TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAGAAGAGAACCATGTTaGAACCACCTAGTATGGATG +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSARREPC*NHLVWM
Trigger: CATCCATACTAGGTGGTTCCAACATGGTTCTCTTCT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTCTCTGGTGAATTTCTaGTGTCTAATGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSLVNF*CLMKEM
Trigger: CATTTCCTTCATTAGACACCAGAAATTCACCAGAGA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCAAGCTGAAGGAATCATaGGACCCTGGAATGGCTAAA +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIKLKES*DPGMAK
Trigger: TTTAGCCATTCCAGGGTCTCATGATTCCTTCAGCTT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATCTTTCTTCTCTCAGTaGTGGATGCTTGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSASFFSQ*WMLEET
Trigger: AGTTTCTTCAAGCATCCATCACTGAGAGAAGAAAGA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATCCTGTTTGGTTGAGTaGCCAAAGATTAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLSCLVE*PKIKRL
Trigger: CAATCTTTTAATCTTTGGTCACTCAACCAAACAGGA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAATTGGCAGGAAAGCTTaGAGTCTTTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAIGRKA*SLFLLP
Trigger: AGGAAGAAGAAAAAGACTGCAAGCTTTCCTGCCAAT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTACACATTGCTCTAACTaGTTCTACCAGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQITHCSN*FYQPSS
Trigger: AGAGGAAGGCTGGTAGAAGCAGTTAGAGCAATGTGT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGCGGGGTCTCTGGGCTTaGTGGAAATTCGAAGATCAA +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKRGLWA*WKFEDQ
Trigger: TTGATCTTCGAATTTCCACCAAGCCCAGAGACCCCG...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR CCA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATACCTTACCATTTACTaGGTACTTGCAGGGCAATAT +
Preference number: 4 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAYLTIY*VLAGQY
Trigger: ATATTGCCCTGCAAGTACCCAGTAAATGGTAAGGTA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCATGCTATCACAGGAATaGGCATATGTTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: KRGPGTELGGVATFQEHFMLSQE*AYVCIL
Trigger: CAATATACAAACATATGCCCATTCCTGTGATAGCAT...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCATGTCGGTGTGTTTTTaGTTGTCCCAGTTACTGGGA +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIMSVCF*LSQLLG
Trigger: TCCCAGTAACTGGGACAACCAAAAACACACCGACAT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATCTCTGGTGAATTTCTaGTGTCTAATGAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLSLVNF*CLMKEM
Trigger: CATTTCCTTCATTAGACACCAGAAATTCACCAGAGA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCAGTGATGGATGCTTaGAGAAACTGGATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISVMDA*RNWISF
Trigger: GAAACTGATCCAGTTTCTTCAAGCATCCATCACTGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCGATGAAACTCAGAAGTaGGGAGTCAGAGCCAATTTT +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIDETQK*GVRANF
Trigger: AAAATTGGCTCTGACTCCTCACTTCTGAGTTTCATC...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGTGCTACAAGCTCTCTaGAAAGACAATGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKVLQAL*KDNAQL
Trigger: CAGCTGGGCATTGTCTTTTCAGAGAGCTTGTAGCAC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGTTCCACCCACTCCTTTaGTTTCCTGCTGTAGATTGG +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKFHPLL*FPAVDW
Trigger: CCAATCTACAGCAGGAAATCAAAGGAGTGGGTGGAA...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTTAGGTGGCACTCCATaGAAAGTAAGTTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIILGGTP*KVSFPS
Trigger: ACTGGGAAAACTTACTTTTCATGGAGTGCCACCTAA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTGAAACATGCATTTCCTaGGACTTCCAACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIETCIS*DFQLSS
Trigger: ACTGGAAAGTTGGAAGTCTCAGGAAATGCATGTTTC...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCTCTCAGTGATGGATaGTTGAAGAAACTGGATCAG +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISLSDG*LKKLDQ
Trigger: CTGATCCAGTTTCTTCAAGCATCCATCACTGAGAGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCCATTTACTCTAAGTaGCTGCTACATAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISIYSK*LLHRHC
Trigger: ACAGTGCCTATGTAGCAGGCACTTAGAGTAAATGGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCCTGGTCGTTATAATTTaGTTTGACGAGTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIILVVII*FDESLC
Trigger: GCAGAGAGACTCGTCAAAGCAAATTATAACGACCAG...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAACATTGTCGGGGTCTCTaGGCTTGGTGGAAATTCGAA +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKHCRGL*AWWKFE
Trigger: TTCGAATTTCCACCAAGCCCAGAGACCCCGACAATG...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTTTAAACTAACTTCCTaGGCAAAAATCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIFKLTS*AKIAGH
Trigger: GTGCCCAGCGATTTTTGCCCAGGAAGTTAGTTTAAA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAACTAACCATTTCCGCATaGGCTTTTTGGCCACAGTTC +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKLTISA*AFWPQF
Trigger: GAACTGTGGCCAAAAAGCTCATGCGGAAATGGTTAG...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTGTCAAATATCACAATaGCACGAAGGAGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQICQISQ*HEGGSN
Trigger: GTTACTTCCTCCTTCGTGTCATTGTGATATTTGACA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTGTCAAATATCACAATaGCACGAAGGAGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIICQISQ*HEGGSN
Trigger: GTTACTTCCTCCTTCGTGTCATTGTGATATTTGACA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCGGCATTTTCTATTTCTaGTGGCCTCACTTTTCATTG +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIGIFYF*WPHFSL
Trigger: CAATGAAAAGTGAGGCCATCAGAAATAGAAAATGCC...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTATCCCATCTGTATTTaGGTTCGTCCTTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIYPICI*VRPSKS
Trigger: GCTTTTTGAAGGACGAACTCAAATACAGATGGGATA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTTAAAGAAAAATGGGTaGCATGTTGGGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIILKKNG*HVGKVN
Trigger: GTTGACCTTCCCAACATGGCACCCATTTTTCTTTAA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTTAAAGAAAAATGGGTaGCATGTTGGGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQILKKNG*HVGKVN
Trigger: GTTGACCTTCCCAACATGGCACCCATTTTTCTTTAA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAATTTGACGAGTCTCTCTaGCAGGTGATAGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKFDESL*QVIAAC
Trigger: ACATGCAGCTATCACCTGGCAGAGAGACTCGTCAAA...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGAAATGTCACCAGCTCTaGAAATTCCCATCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKKCHQL*KFPSSR
Trigger: TCTGGAGGATGGGAATTTGCAGAGCTGGTGACATTT...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTAGTGCTATCAAGTGTTaGCTTCTCCTTCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISAIKC*LLLHQR
Trigger: TCTTTGATGAAGGAGAAGCCAACACTTGATAGCACT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTACCTTACCATTTACTaGGTACTTGCAGGGCAATAT +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIYLTIY*VLAGQY
Trigger: ATATTGCCCTGCAAGTACCCAGTAAATGGTAAGGTA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTTGAAAATCCCAAATTaGCAGGAAAGCTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQILKIPN*QESLQS
Trigger: AGACTGCAAGCTTTCCTGCCAATTTGGGATTTTCAA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTACGGAACTCCTGTTTaGTTGAGTGACCAAAGATTA +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIYGTPV*LSDQRL
Trigger: TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAACTACCTCCTTATGGTaGTCTGTGAGGAATGCATTG +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKTTSLW*SVRNAL
Trigger: CAATGCATTCCTCACAGATCACCATAAGGAGGTAGT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCCTGTTTGGTTGAGTaGCCAAAGATTAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISCLVE*PKIKRL
Trigger: CAATCTTTTAATCTTTGGTCACTCAACCAAACAGGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAACGTTATAATTTGCTTTaGCGAGTCTCTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKRYNLL*RVSLPG
Trigger: ACCTGGCAGAGAGACTCGTCAAAGCAAATTATAACG...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCAGAGGAGGTAGCTACTaGAAATGTTTCAAAATTCCA +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIRGGSY*KCFKIP
Trigger: TGGAATTTTGAAACATTTTCAGTAGCTACCTCCTCT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTGTAAGCAGGAGTCATaGGATGGACATGTTATATTA +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQICKQES*DGHVIL
Trigger: TAATATAACATGTCCATCTCATGACTCCTGCTTACA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAACACATTGCTCTAACTaGTTCTACCAGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKTHCSN*FYQPSS
Trigger: AGAGGAAGGCTGGTAGAAGCAGTTAGAGCAATGTGT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCTATGACCCTACTTTaGATGGACTGTATTATCCTA +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISMTLL*MDCIIL
Trigger: TAGGATAATACAGTCCATGCAAAGTAGGGTCATAGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGTCCATTTACTCTAAGTaGCTGCTACATAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKSIYSK*LLHRHC
Trigger: ACAGTGCCTATGTAGCAGGCACTTAGAGTAAATGGA...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR GCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGTCTCTGAAAAGACAATaGCCAGCTGAGACAAATGTG +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKSLKRQ*PAETNV
Trigger: CACATTTGTCTCAGCTGGGCATTGTCTTTTCAGAGA...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR CCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGGGTCTCTGGGCTTGGTaGAAATTCGAAGATCAAAAT +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKGLWAW*KFEDQN
Trigger: ATTTTGATCTTCGAATTTCCACCAAGCCCAGAGACC...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR CCA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCTCCATCTTATTCATaGAAACTCCAAGTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISPSYS*KLQVVL
Trigger: TAGCACTACTTGGAGTTTCCATGAATAAGATGGAGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGGGCATTTTCTATTTCTaGTGGCCTCACTTTTCATTG +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKGIFYF*WPHFSL
Trigger: CAATGAAAAGTGAGGCCATCAGAAATAGAAAATGCC...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGAAACATGCATTTCCTaGGACTTCCAACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKETCIS*DFQLSS
Trigger: ACTGGAAAGTTGGAAGTCTCAGGAAATGCATGTTTC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCCATTTACTGGGTACTTaGAGGGCAATATTATTTAAG +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIHLLGT*RAILFK
Trigger: CTTAAATAATATTGCCCTGCAAGTACCCAGTAAATG...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAATTTAAACTAACTTCCTaGGCAAAAATCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKFKLTS*AKIAGH
Trigger: GTGCCCAGCGATTTTTGCCCAGGAAGTTAGTTTAAA...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCATGCTATCACAGGAATaGGCATATGTTTGTATATTG +
Preference number: 4 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIMLSQE*AYVCIL
Trigger: CAATATACAAACATATGCCCATTCCTGTGATAGCAT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGGTTGTCCCAGTTACTaGGAAATGCTATATAAGGGA +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKGCPSY*EMLYKG
Trigger: TCCCTTATATAGCATTTCCCAGTAACTGGGACAACC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGCTTTTATTTCTCTATaGCCCTACTTTGCATGGACT +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKAFISL*PYFAWT
Trigger: AGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR TCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGCCTCACAGGACTTGTaGAATAGTCTTAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKASQDL*NSLKKQ
Trigger: TTGTTTCTTAAGACTATTTCACAAGTCCTGTGAGGC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR GCA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGTCTATGACCCTACTTTaGATGGACTGTATTATCCTA +
Preference number: 4 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKSMTLL*MDCIIL
Trigger: TAGGATAATACAGTCCATGCAAAGTAGGGTCATAGA...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR GCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAAACAAGGTTTCTGGGTaGATATCATTAGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKNKVSG*ISLAAV
Trigger: TACTGCTGCTAATGATATGCACCCAGAAACCTTGTT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CCA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAACATTCACTGTTAGGTaGCACTCCATGAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKTFTVR*HSMKSK
Trigger: CTTACTTTTCATGGAGTGCCACCTAACAGTGAATGT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
3UTR CAA 72 bp CAATGTAATACACAAAATGTTGGGCATTCAATTGTTTaGATTCCCATACAGCATCTGATTAAAAAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: QCNTQNVGHSIV*IPIQHLIKKSE
Trigger: CTCGCTCTTTTTAATCAGATGCTGTATGGGAATCAAAACAATTGAATGCCCAACATTTTGTGTATTACATTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 90 bp CCAGTCGGCGTGCAGCGCGCTGGTCCCAGCACTCCTCGGGCAGGCTaGCAGGCTGCTGCCGCTAATCCAATGTTTGCTCTAGCCCCGCTA +
Preference number: 5 (lower is better)
Translates to: PVGVQRAGPSTPRAG*QAAAANPMFALAPL
Trigger: TAGCGGGGCTAGAGCAAACATTGGATTAGCGGCAGCAGCCTGCCAGCCTGCCCGAGGAGTGCTGGGACCAGCGCGCTGCACGCCGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS GCA 90 bp AGTCGGCTAATTTCAGCTCGTTTTTCCCCTGAGACGAGGCCATCGTaGCAGTCGGCGTGCAGCGCGCTGGTCCCAGCACTCCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: SRLISARFSPETRPS*QSACSALVPALLGQ
Trigger: CTGCCCGAGGAGTGCTGGGACCAGCGCGCTGCACGCCGACTGGCACGATGGCCTCGTCTCAGGGGAAAAACGAGCTGAAATTAGCCGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS TCA 90 bp GGCAGAGTTGCCATCCAGTCGGCTAATTTCAGCTCGTTTTTCCCCTaGGACGAGGCCATCGTGCCAGTCGGCGTGCAGCGCGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GRVAIQSANFSSFFP*DEAIVPVGVQRAGP
Trigger: GGGACCAGCGCGCTGCACGCCGACTGGCACGATGGCCTCGTCTCAGGGGAAAAACGAGCTGAAATTAGCCGACTGGATGGCAACTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTCGGGGTCTGTGGTGTaGGCCCAGGGTGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: GVSTTILAPMCSPCATSSSGSVV*AQGAGI
Trigger: GATGCCAGCACCCTGGGCCAACACCACAGACCCCGA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 90 bp TGGATGCTTGAAGAAACTGGATCAGTTTCTCGGGGTCTGTGGTGTTaGCCCAGGGTGCTGGCATCATCTGCCCAGGCCAGAGAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: WMLEETGSVSRGLWC*PRVLASSAQARERA
Trigger: TGCCCTTTCTCTGGCCTGGGCAGATGATGCCAGCACCCTGGGCCAACACCACAGACCCCGAGAAACTGATCCAGTTTCTTCAAGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGATTCTATCCCCTACTaGCGCCTGCCTCCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: GVSTTILAPMCSPCATSSDSIPY*RLPPLS
Trigger: GGACAGGGGAGGCAGGCGCAAGTAGGGGATAGAATC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGATTCTATCCCCTACTaGCGCCTGCCTCCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVADSIPY*RLPPLS
Trigger: GGACAGGGGAGGCAGGCGCAAGTAGGGGATAGAATC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTGCTCAAGCTGTGTCATaGTTCTTCCCTGTAGACCCG +
Preference number: 5 (lower is better)
Translates to: GVSTTILAPMCSPCATSSAQAVS*FFPVDP
Trigger: CGGGTCTACAGGGAAGAACAATGACACAGCTTGAGC...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTGTATCTACCACCATCTaGGCGCCCATGTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAVSTTI*APMCSP
Trigger: AGGGCTACACATGGGCGCCAAGATGGTGGTAGATAC...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 90 bp ACAAAATCGGCAGTGACAATATTGATGCCACTCTCTCCTGGCTTCTaGGTGCGGACCCACTGCATCATGGCAGGAAGAGCTCTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TKSAVTILMPLSPGF*VRTHCIMAGRALSV
Trigger: CACAGAAAGAGCTCTTCCTGCCATGATGCAGTGGGTCCGCACGCAGAAGCCAGGAGAGAGTGGCATCAATATTGTCACTGCCGATTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTGCTCTCCGGCAGAGTaGCCATCCAGTCGGCTAATT +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFCSPAE*PSSRLI
Trigger: AATTAGCCGACTGGATGGCAACTCTGCCGGAGAGCA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTTCCGCATGAGCTTTTaGGCCACAGTTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: GVSTTILAPMCSPCATSSFRMSF*ATVPNT
Trigger: TGTGTTTGGAACTGTGGCCAAAAAGCTCATGCGGAA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTGTAGAAGACCAGCACTaGATAGTCCTTCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAVEDQH*IVLLPQ
Trigger: CTGTGGGAGAAGGACTATCAAGTGCTGGTCTTCTAC...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTCGGGGTCTGTGGTGTaGGCCCAGGGTGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: LRACFYFSMTLLCMDCIISGSVV*AQGAGI
Trigger: GATGCCAGCACCCTGGGCCAACACCACAGACCCCGA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCCCACTTGCCACCCCTTaGACCACAGTGCTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFPLATP*TTVLAL
Trigger: CAAAGCTAGCACTGTGGTCAAAGGGGTGGCAAGTGG...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTCCTTCAAAAAGCATTaGCAGGACCTAGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: GVSTTILAPMCSPCATSSSFKKH*QDLELT
Trigger: GGTCAGCTCTAGGTCCTGCAAATGCTTTTTGAAGGA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTTATGTCGGTGTGTTTTaGGTTGTCCCAGTTACTGGG +
Preference number: 5 (lower is better)
Translates to: GVSTTILAPMCSPCATSSYVGVF*VVPVTG
Trigger: CCCAGTAACTGGGACAACCAAAAACACACCGACATA...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACCTGGAATGGCTAAATaGGTGAGGGGGATGCTGTGC +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLPGMAK*VRGMLC
Trigger: GCACAGCATCCCCCTCACCAATTTAGCCATTCCAGG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTCGGGGTCTCTGGGCTaGGTGGAAATTCGAAGATCA +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSGSLG*VEIRRS
Trigger: TGATCTTCGAATTTCCACCAAGCCCAGAGACCCCGA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTCTAGAAAAGTGTGTGGGTaGCATGCTTGTTTTCTCGAG +
Preference number: 5 (lower is better)
Translates to: GVSTTILAPMCSPCATSSRKVCG*HACFLE
Trigger: CTCGAGAAAACAAGCATGCAACCCACACACTTTTCT...AGAGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 90 bp CGCATGAGCTTTTTGGCCACAGTTCCAAACACAGAGACAAAATTCTaGACAGTTTCTGGCTGCTCAGGACCTACTGGAGAGGCTTCATCA +
Preference number: 5 (lower is better)
Translates to: RMSFLATVPNTETKF*TVSGCSGPTGEASS
Trigger: TGATGAAGCCTCTCCAGTAGGTCCTGAGCAGCCAGAAACTGTCCAGAATTTTGTCTCTGTGTTTGGAACTGTGGCCAAAAAGCTCATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCACCTGGAATGGCTAAATaGGTGAGGGGGATGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAPGMAK*VRGMLC
Trigger: GCACAGCATCCCCCTCACCAATTTAGCCATTCCAGG...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTCTGTGAGGAATGCATaGATCTCCTCAAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVASVRNA*ISSRPS
Trigger: TGAAGGCCTTGAGGAGATCAATGCATTCCTCACAGA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTGAGAAGAGAACCATGTaGGAACCACCTAGTATGGAT +
Preference number: 5 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAEKRTM*EPPSMD
Trigger: ATCCATACTAGGTGGTTCCAACATGGTTCTCTTCTC...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 90 bp CACAGAGACAAAATTCTGGACAGTTTCTGGCTGCTCAGGACCTACTaGAGAGGCTTCATCAATGTAGAAGCTGAAGGAATCATGAGACCC +
Preference number: 5 (lower is better)
Translates to: HRDKILDSFWLLRTY*RGFINVEAEGIMRP
Trigger: GGGTCTCATGATTCCTTCAGCTTCTACATTGATGAAGCCTCTCCAGTAGGTCCTGAGCAGCCAGAAACTGTCCAGAATTTTGTCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCTCCTCAAGGCCTTCATaGACTTTGGCACTGAACAAA +
Preference number: 5 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVASSRPS*TLALNK
Trigger: TTTGTTCAGTGCCAAAGTCAATGAAGGCCTTGAGGA...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTTGTGCTACAAGCTTTTGAAAATCCCAAATaGGCAGGAAAGCTTGCAGTC +
Preference number: 5 (lower is better)
Translates to: KVYLPPSWRPCVALVLQAFENPK*AGKLAV
Trigger: GACTGCAAGCTTTCCTGCCAATTTGGGATTTTCAAA...AGCTTGTAGCACAAGGGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCATTCCACCCACTCCTTaGATTTCCTGCTGTAGATTG +
Preference number: 5 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVAIPPTP*ISCCRL
Trigger: CAATCTACAGCAGGAAATCAAAGGAGTGGGTGGAAT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCCACAAGGTGGACAGTTaGCTTGTGGGAACTCAGATA +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFHKVDS*LVGTQI
Trigger: TATCTGAGTTCCCACAAGCAAACTGTCCACCTTGTG...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGTGTGGGTTGCATGCTaGTTTTCTCGAGAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFVWVAC*FSREEN
Trigger: GTTCTCTTCTCGAGAAAACAAGCATGCAACCCACAC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 90 bp TTTGGCCACAGTTCCAAACACAGAGACAAAATTCTGGACAGTTTCTaGCTGCTCAGGACCTACTGGAGAGGCTTCATCAATGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: FGHSSKHRDKILDSF*LLRTYWRGFINVEA
Trigger: AGCTTCTACATTGATGAAGCCTCTCCAGTAGGTCCTGAGCAGCCAGAAACTGTCCAGAATTTTGTCTCTGTGTTTGGAACTGTGGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATCTGTGAGGAATGCATaGATCTCCTCAAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLSVRNA*ISSRPS
Trigger: TGAAGGCCTTGAGGAGATCAATGCATTCCTCACAGA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCGATGTCTTTCAGCATTaGGACCAGTTTTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVADVFQH*DQFFMV
Trigger: CACCATGAAAAACTGGTCCAAATGCTGAAAGACATC...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCCTCTATGACCCTACTTaGCATGGACTGTATTATCCT +
Preference number: 5 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVALYDPT*HGLYYP
Trigger: AGGATAATACAGTCCATGCAAAGTAGGGTCATAGAG...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTGTATCTACCACCATCTaGGCGCCCATGTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIVSTTI*APMCSP
Trigger: AGGGCTACACATGGGCGCCAAGATGGTGGTAGATAC...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACACAAGGTGGACAGTTaGCTTGTGGGAACTCAGATA +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLHKVDS*LVGTQI
Trigger: TATCTGAGTTCCCACAAGCAAACTGTCCACCTTGTG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGAGAAGAGAACCATGTaGGAACCACCTAGTATGGAT +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFEKRTM*EPPSMD
Trigger: ATCCATACTAGGTGGTTCCAACATGGTTCTCTTCTC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATATGTCGGTGTGTTTTaGGTTGTCCCAGTTACTGGG +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLYVGVF*VVPVTG
Trigger: CCCAGTAACTGGGACAACCAAAAACACACCGACATA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCGGCAGTGACAATATaGATGCCACTCTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISAVTI*MPLSPG
Trigger: GCCAGGAGAGAGTGGCATCAATATTGTCACTGCCGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTCGGCAGTGACAATATaGATGCCACTCTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LRACFYFSMTLLCMDCIISAVTI*MPLSPG
Trigger: GCCAGGAGAGAGTGGCATCAATATTGTCACTGCCGA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 90 bp GTTGAAGTCCAAGAACACTACCTCCTTATGGTGATCTGTGAGGAATaGATTGATCTCCTCAAGGCCTTCATTGACTTTGGCACTGAACAA +
Preference number: 5 (lower is better)
Translates to: VEVQEHYLLMVICEE*IDLLKAFIDFGTEQ
Trigger: TTGTTCAGTGCCAAAGTCAATGAAGGCCTTGAGGAGATCAATGCATTCCTCACAGATCACCATAAGGAGGTAGTGTTCTTGGACTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAGGGCATTCAATTGTTTaGATTCCCATACAGCATCTG +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLGHSIV*IPIQHL
Trigger: CAGATGCTGTATGGGAATCAAAACAATTGAATGCCC...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCTCATTGCAAATATTCTaGGCTAAGATCCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSLQIF*AKILLK
Trigger: CTTCAGGAGGATCTTAGCCAAGAATATTTGCAATGA...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AACAAAAAGTGCACCAAGGTGTATCTACCACCATCTTGGCGCCCATGTGTAGCCAGCAATAGACTCAGATaGATTAGAGTGCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: NKKCTKVYLPPSWRPCVASNRLR*IRVQFQ
Trigger: TTGAAACTGCACTCTAATCAATCTGAGTCTATTGCT...GGCTACACATGGGCGCCAAGATGGTGGTAGATACACCTTGGTGCACTTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATCGGTGTGTTTTTGGTaGTCCCAGTTACTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSASVCFW*SQLLGN
Trigger: ATTTCCCAGTAACTGGGACAACCAAAAACACACCGA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAATGCTCTCCGGCAGAGTaGCCATCCAGTCGGCTAATT +
Preference number: 5 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKCSPAE*PSSRLI
Trigger: AATTAGCCGACTGGATGGCAACTCTGCCGGAGAGCA...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCACTCAGTGATGGATGCTaGAAGAAACTGGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSALSDGC*KKLDQF
Trigger: AAACTGATCCAGTTTCTTCAAGCATCCATCACTGAG...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGGGCATTCAATTGTTTaGATTCCCATACAGCATCTG +
Preference number: 5 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAGHSIV*IPIQHL
Trigger: CAGATGCTGTATGGGAATCAAAACAATTGAATGCCC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCGGAATGGGCATATGTTaGTATATTGTATATGGCAAG +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFGMGIC*YIVYGK
Trigger: CTTGCCATATACAATATACAAACATATGCCCATTCC...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTATCATTGCAAATATTCTaGGCTAAGATCCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLSLQIF*AKILLK
Trigger: CTTCAGGAGGATCTTAGCCAAGAATATTTGCAATGA...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp AAAAGAGGTCCTGGTACTGAGTTAGGCGGTGTTGCCACTTTTCAGGAGCATTTCAGCAATAGACTCAGATaGATTAGAGTGCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: KRGPGTELGGVATFQEHFSNRLR*IRVQFQ
Trigger: TTGAAACTGCACTCTAATCAATCTGAGTCTATTGCT...GAAATGCTCCTGAAAAGTGGCAACACCGCCTAACTCAGTACCAGGACCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTAGGAACTCCTGTTTGGTaGAGTGACCAAAGATTAAAA +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLGTPVW*SDQRLK
Trigger: TTTTAATCTTTGGTCACTCAACCAAACAGGAGTTCC...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAAAATGGGTGCCATGTaGGGAAGGTCAACTTTAAAG +
Preference number: 5 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAKMGAM*GRSTLK
Trigger: CTTTAAAGTTGACCTTCCCAACATGGCACCCATTTT...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTGTGTGGGTTGCATGCTaGTTTTCTCGAGAAGAGAAC +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIVWVAC*FSREEN
Trigger: GTTCTCTTCTCGAGAAAACAAGCATGCAACCCACAC...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CAAAGTGAGCACTCTGCCTACGGAACTCCTGTTTGGTTGAGTGACCAAAGATTACACATGTGTAGATCCTaGTCAGTCATGAGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: QSEHSAYGTPVWLSDQRLHMCRS*SVMSFL
Trigger: TAGAAAACTCATGACTGACAAGGATCTACACATGTG...TAATCTTTGGTCACTCAACCAAACAGGAGTTCCGTAGGCAGAGTGCTCACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTCCTTCAAAAAGCATTaGCAGGACCTAGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQISFKKH*QDLELT
Trigger: GGTCAGCTCTAGGTCCTGCAAATGCTTTTTGAAGGA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAATCGGGGTCTCTGGGCTaGGTGGAAATTCGAAGATCA +
Preference number: 5 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKSGSLG*VEIRRS
Trigger: TGATCTTCGAATTTCCACCAAGCCCAGAGACCCCGA...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTCCTCAAGGCCTTCATaGACTTTGGCACTGAACAAA +
Preference number: 5 (lower is better)
Translates to: LRACFYFSMTLLCMDCIISSRPS*TLALNK
Trigger: TTTGTTCAGTGCCAAAGTCAATGAAGGCCTTGAGGA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCAGAAAAGTGTGTGGGTaGCATGCTTGTTTTCTCGAG +
Preference number: 5 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIRKVCG*HACFLE
Trigger: CTCGAGAAAACAAGCATGCAACCCACACACTTTTCT...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTCGGTGTGTTTTTGGTaGTCCCAGTTACTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LRACFYFSMTLLCMDCIISVCFW*SQLLGN
Trigger: ATTTCCCAGTAACTGGGACAACCAAAAACACACCGA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGTAGAAGACCAGCACTaGATAGTCCTTCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKVEDQH*IVLLPQ
Trigger: CTGTGGGAGAAGGACTATCAAGTGCTGGTCTTCTAC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTTTGAAAATCCCAAATaGGCAGGAAAGCTTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIFENPK*AGKLAV
Trigger: GACTGCAAGCTTTCCTGCCAATTTGGGATTTTCAAA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTCTCTATGACCCTACTTaGCATGGACTGTATTATCCT +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQILYDPT*HGLYYP
Trigger: AGGATAATACAGTCCATGCAAAGTAGGGTCATAGAG...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAGGAATGGGCATATGTTaGTATATTGTATATGGCAAG +
Preference number: 5 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAGMGIC*YIVYGK
Trigger: CTTGCCATATACAATATACAAACATATGCCCATTCC...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCATTTTCCAGAACCCAGTaGACAAATAGGACAAAGTTA +
Preference number: 5 (lower is better)
Translates to: SLSGEFLVSNEGNVTSSAFSRTQ*TNRTKL
Trigger: TAACTTTGTCCTATTTGTCAACTGGGTTCTGGAAAA...TGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTAAAATGGGTGCCATGTaGGGAAGGTCAACTTTAAAG +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQIKMGAM*GRSTLK
Trigger: CTTTAAAGTTGACCTTCCCAACATGGCACCCATTTT...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGCTCAGTGATGGATGCTaGAAGAAACTGGATCAGTTT +
Preference number: 5 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKLSDGC*KKLDQF
Trigger: AAACTGATCCAGTTTCTTCAAGCATCCATCACTGAG...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR CAA 90 bp CTGAGGGCATGCTTTTATTTCTCTATGACCCTACTTTGCATGGACTGTATTATCTTTTCCAGAACCCAGTaGACAAATAGGACAAAGTTA +
Preference number: 5 (lower is better)
Translates to: LRACFYFSMTLLCMDCIIFSRTQ*TNRTKL
Trigger: TAACTTTGTCCTATTTGTCAACTGGGTTCTGGAAAA...GATAATACAGTCCATGCAAAGTAGGGTCATAGAGAAATAAAAGCATGCCCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAATTCCACCCACTCCTTaGATTTCCTGCTGTAGATTG +
Preference number: 5 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKIPPTP*ISCCRL
Trigger: CAATCTACAGCAGGAAATCAAAGGAGTGGGTGGAAT...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TCTCTGGTGAATTTCTGGTGTCTAATGAAGGAAATGTCACCAGCTCTGCAAATTTTATCCCATCTGTATTaGAGTTCGTCCTTCAAAAAG +
Preference number: 5 (lower is better)
Translates to: SLVNFWCLMKEMSPALQILSHLY*SSSFKK
Trigger: CTTTTTGAAGGACGAACTCAAATACAGATGGGATAA...AATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACCAGAAATTCACCAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAAGATGTCTTTCAGCATTaGGACCAGTTTTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKDVFQH*DQFFMV
Trigger: CACCATGAAAAACTGGTCCAAATGCTGAAAGACATC...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS-3UTR CAA 90 bp GAAAGCTTGCAGTCTTTTTCTTCTTCCTTCCTTCTGTCTTTTTCTTTCATCAAGGGAACTCCTGTTTGGTaGAGTGACCAAAGATTAAAA +
Preference number: 5 (lower is better)
Translates to: ESLQSFSSSFLLSFSFIKGTPVW*SDQRLK
Trigger: TTTTAATCTTTGGTCACTCAACCAAACAGGAGTTCC...CTTGATGAAAGAAAAAGACAGAAGGAAGGAAGAAGAAAAAGACTGCAAGCTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328457.5
CDS-3UTR CAA 90 bp TTGGTATACCACAGGTACATACACACTCCTCATAAACATTCTCTTCAGTATAAACACATGTGTAGATCCTaGTCAGTCATGAGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: LVYHRYIHTPHKHSLQYKHMCRS*SVMSFL
Trigger: TAGAAAACTCATGACTGACAAGGATCTACACATGTG...TTTATACTGAAGAGAATGTTTATGAGGAGTGTGTATGTACCTGTGGTATACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 72 bp AGACGAGGCCATCGTGCCAGTCGGCGTGCAGCGCGCTaGTCCCAGCACTCCTCGGGCAGGCTGGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: RRGHRASRRAAR*SQHSSGRLAGC
Trigger: GCAGCCTGCCAGCCTGCCCGAGGAGTGCTGGGACCAGCGCGCTGCACGCCGACTGGCACGATGGCCTCGTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 72 bp TTTTCCCCTGAGACGAGGCCATCGTGCCAGTCGGCGTaGAGCGCGCTGGTCCCAGCACTCCTCGGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: FSPETRPSCQSA*SALVPALLGQA
Trigger: AGCCTGCCCGAGGAGTGCTGGGACCAGCGCGCTGCACGCCGACTGGCACGATGGCCTCGTCTCAGGGGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 72 bp ATTTCAGCTCGTTTTTCCCCTGAGACGAGGCCATCGTaGCAGTCGGCGTGCAGCGCGCTGGTCCCAGCACTC +
Preference number: 6 (lower is better)
Translates to: ISARFSPETRPS*QSACSALVPAL
Trigger: GAGTGCTGGGACCAGCGCGCTGCACGCCGACTGGCACGATGGCCTCGTCTCAGGGGAAAAACGAGCTGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS TCA 72 bp GCCATCCAGTCGGCTAATTTCAGCTCGTTTTTCCCCTaGGACGAGGCCATCGTGCCAGTCGGCGTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: AIQSANFSSFFP*DEAIVPVGVQR
Trigger: GCGCTGCACGCCGACTGGCACGATGGCCTCGTCTCAGGGGAAAAACGAGCTGAAATTAGCCGACTGGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 72 bp GACCCTGGAATGGCTAAATTGGTGAGGGGGATGCTGTaGATGCTCTCCGGCAGAGTTGCCATCCAGTCGGCT +
Preference number: 6 (lower is better)
Translates to: DPGMAKLVRGML*MLSGRVAIQSA
Trigger: AGCCGACTGGATGGCAACTCTGCCGGAGAGCATGCACAGCATCCCCCTCACCAATTTAGCCATTCCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 72 bp GAAGAAACTGGATCAGTTTCTCGGGGTCTGTGGTGTTaGCCCAGGGTGCTGGCATCATCTGCCCAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: EETGSVSRGLWC*PRVLASSAQAR
Trigger: TCTGGCCTGGGCAGATGATGCCAGCACCCTGGGCCAACACCACAGACCCCGAGAAACTGATCCAGTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 72 bp GCAGTGACAATATTGATGCCACTCTCTCCTGGCTTCTaGGTGCGGACCCACTGCATCATGGCAGGAAGAGCT +
Preference number: 6 (lower is better)
Translates to: AVTILMPLSPGF*VRTHCIMAGRA
Trigger: AGCTCTTCCTGCCATGATGCAGTGGGTCCGCACGCAGAAGCCAGGAGAGAGTGGCATCAATATTGTCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 72 bp ATGCTTGAAGAAACTGGATCAGTTTCTCGGGGTCTGTaGTGTTGGCCCAGGGTGCTGGCATCATCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: MLEETGSVSRGL*CWPRVLASSAQ
Trigger: CTGGGCAGATGATGCCAGCACCCTGGGCCAACACCACAGACCCCGAGAAACTGATCCAGTTTCTTCAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CAA 72 bp TCTGTGATTGTTTCTCTGAGGCCACTTGCCACCCCTTaGACCACAGTGCTAGCTTTGGGGGTCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: SVIVSLRPLATP*TTVLALGVSTT
Trigger: GGTGGTGCTGACCCCCAAAGCTAGCACTGTGGTCAAAGGGGTGGCAAGTGGCCTCAGAGAAACAATCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 72 bp ATGCCACTCTCTCCTGGCTTCTGCGTGCGGACCCACTaGATCATGGCAGGAAGAGCTCTTTCTGTGATTGTT +
Preference number: 6 (lower is better)
Translates to: MPLSPGFCVRTH*IMAGRALSVIV
Trigger: AACAATCACAGAAAGAGCTCTTCCTGCCATGATGCAGTGGGTCCGCACGCAGAAGCCAGGAGAGAGTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CAA 90 bp GTGCTGATAAAGTCACCAAGTTCTACAAAATCGGCAGTGACAATATaGATGCCACTCTCTCCTGGCTTCTGCGTGCGGACCCACTGCATC +
Preference number: 6 (lower is better)
Translates to: VLIKSPSSTKSAVTI*MPLSPGFCVRTHCI
Trigger: GATGCAGTGGGTCCGCACGCAGAAGCCAGGAGAGAGTGGCATCAATATTGTCACTGCCGATTTTGTAGAACTTGGTGACTTTATCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CAA 72 bp AAGTCACCAAGTTCTACAAAATCGGCAGTGACAATATaGATGCCACTCTCTCCTGGCTTCTGCGTGCGGACC +
Preference number: 6 (lower is better)
Translates to: KSPSSTKSAVTI*MPLSPGFCVRT
Trigger: GGTCCGCACGCAGAAGCCAGGAGAGAGTGGCATCAATATTGTCACTGCCGATTTTGTAGAACTTGGTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS TCA 72 bp CAGGACCTACTGGAGAGGCTTCATCAATGTAGAAGCTaGAGGAATCATGAGACCCTGGAATGGCTAAATTGG +
Preference number: 6 (lower is better)
Translates to: QDLLERLHQCRS*RNHETLEWLNW
Trigger: CCAATTTAGCCATTCCAGGGTCTCATGATTCCTTCAGCTTCTACATTGATGAAGCCTCTCCAGTAGGTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS TCA 72 bp ATTCCAGCTCCTAGCTGGCCAGTAAAATTCATTGTCTaGGTGGCTAACCATTTCCGCATGAGCTTTTTGGCC +
Preference number: 6 (lower is better)
Translates to: IPAPSWPVKFIV*VANHFRMSFLA
Trigger: GGCCAAAAAGCTCATGCGGAAATGGTTAGCCACTCAGACAATGAATTTTACTGGCCAGCTAGGAGCTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 72 bp TTTTTGGCCACAGTTCCAAACACAGAGACAAAATTCTaGACAGTTTCTGGCTGCTCAGGACCTACTGGAGAG +
Preference number: 6 (lower is better)
Translates to: FLATVPNTETKF*TVSGCSGPTGE
Trigger: CTCTCCAGTAGGTCCTGAGCAGCCAGAAACTGTCCAGAATTTTGTCTCTGTGTTTGGAACTGTGGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS TCA 72 bp AAGTGGTTGAAGTCCAAGAACACTACCTCCTTATGGTaGTCTGTGAGGAATGCATTGATCTCCTCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: KWLKSKNTTSLW*SVRNALISSRP
Trigger: AGGCCTTGAGGAGATCAATGCATTCCTCACAGATCACCATAAGGAGGTAGTGTTCTTGGACTTCAACCACTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS GCA 72 bp CAAGAACACTACCTCCTTATGGTGATCTGTGAGGAATaGATTGATCTCCTCAAGGCCTTCATTGACTTTGGC +
Preference number: 6 (lower is better)
Translates to: QEHYLLMVICEE*IDLLKAFIDFG
Trigger: GCCAAAGTCAATGAAGGCCTTGAGGAGATCAATGCATTCCTCACAGATCACCATAAGGAGGTAGTGTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8
CDS CCA 72 bp AAAATTCTGGACAGTTTCTGGCTGCTCAGGACCTACTaGAGAGGCTTCATCAATGTAGAAGCTGAAGGAATC +
Preference number: 6 (lower is better)
Translates to: KILDSFWLLRTY*RGFINVEAEGI
Trigger: GATTCCTTCAGCTTCTACATTGATGAAGCCTCTCCAGTAGGTCCTGAGCAGCCAGAAACTGTCCAGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328457.5
ENST00000377801.8