RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCXD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000240891

Ensembl transcript IDs: ENST00000393934.7, ENST00000468174.1, ENST00000474484.1, ENST00000477665.2, ENST00000636933.1

Found 619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCAGACTTTCAAATTGCAAGCAAGGCTGGCAGCTCCAAGCAGCATaGAGGAGTGAGCACCTGCACGCACCACGCAGAGCAGGACTCCGT +
Preference number: 1 (lower is better)
Translates to: CRLSNCKQGWQLQAA*RSEHLHAPRRAGLR
Trigger: ACGGAGTCCTGCTCTGCGTGGTGCGTGCAGGTGCTCACTCCTCCATGCTGCTTGGAGCTGCCAGCCTTGCTTGCAATTTGAAAGTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp CCACACATGTATACTGTCCCCAGGAGGACTGGGGGAGCCAGGACATaGACAGCAGAGTCAGGAATCACTCACAGCCCTGAGATGCGTGGT +
Preference number: 1 (lower is better)
Translates to: PHMYTVPRRTGGART*TAESGITHSPEMRG
Trigger: ACCACGCATCTCAGGGCTGTGAGTGATTCCTGACTCTGCTGTTCATGTCCTGGCTCCCCCAGTCCTCCTGGGGACAGTATACATGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATaGATAAGGGGCCTTCCACTTAGCGTTGTGTCCCACAGTGCAGAC +
Preference number: 1 (lower is better)
Translates to: PLQFPMHPAPASMVP*IRGLPLSVVSHSAD
Trigger: GTCTGCACTGTGGGACACAACGCTAAGTGGAAGGCCCCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp GGGAGCCAGGACATGAACAGCAGAGTCAGGAATCACTCACAGCCCTaGGATGCGTGGTCCTGTTCAGGACAGAAAGACCATAGCAGCATC +
Preference number: 1 (lower is better)
Translates to: GSQDMNSRVRNHSQP*DAWSCSGQKDHSSI
Trigger: GATGCTGCTATGGTCTTTCTGTCCTGAACAGGACCACGCATCTCAGGGCTGTGAGTGATTCCTGACTCTGCTGTTCATGTCCTGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp CACTCAAACAGTTCACTCTGTGTGTCCCAAGGCAATGGTTGTAAGTaGCAACGCTATGGTGCCAAACACCAGGGAGCAGCCAGAGGCAGA +
Preference number: 1 (lower is better)
Translates to: HSNSSLCVSQGNGCK*QRYGAKHQGAARGR
Trigger: TCTGCCTCTGGCTGCTCCCTGGTGTTTGGCACCATAGCGTTGTCACTTACAACCATTGCCTTGGGACACACAGAGTGAACTGTTTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp GGCACCTCTCTCTTGGTATCCTCCTCCTCCATCAGGATCTTCTGCTaGATCTCAAAGGATAAACTGGGATCAGTGCCAGCCTTGTCTGCT +
Preference number: 1 (lower is better)
Translates to: GTSLLVSSSSIRIFC*ISKDKLGSVPALSA
Trigger: AGCAGACAAGGCTGGCACTGATCCCAGTTTATCCTTTGAGATTCAGCAGAAGATCCTGATGGAGGAGGAGGATACCAAGAGAGAGGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR TCA 90 bp ATGAGTCATGAACCTAAAATCTGTTTTCCCTCTGTCCCACATGCCTaGGTTCTCCTGTCTGGTCTCACGGTCAAGGAGCAGAAGGCACAC +
Preference number: 1 (lower is better)
Translates to: MSHEPKICFPSVPHA*VLLSGLTVKEQKAH
Trigger: GTGTGCCTTCTGCTCCTTGACCGTGAGACCAGACAGGAGAACTCAGGCATGTGGGACAGAGGGAAAACAGATTTTAGGTTCATGACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp CCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTaGCCTCATAGCACCAAACACCTGGACAAAGCCGAGGCTCAAATA +
Preference number: 1 (lower is better)
Translates to: PWVLLASCVDTCQHT*PHSTKHLDKAEAQI
Trigger: TATTTGAGCCTCGGCTTTGTCCAGGTGTTTGGTGCTATGAGGCCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp TGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTaGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCAC +
Preference number: 1 (lower is better)
Translates to: WSLLPPQICQYQLLC*SLKAWCLSLYIPSH
Trigger: GTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR TCA 90 bp CAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTaGATTGGGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCAGATAT +
Preference number: 1 (lower is better)
Translates to: QGNPLQRFHPEPQTL*IGSSRIGASSLLRY
Trigger: ATATCTGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR TCA 90 bp CTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTaGCCTTGGTCACATGAAGCGTGCTTTCTTCCCTTGGACTTAAGT +
Preference number: 1 (lower is better)
Translates to: LFPNSIHHHKPLGRS*PWSHEACFLPLDLS
Trigger: ACTTAAGTCCAAGGGAAGAAAGCACGCTTCATGTGACCAAGGTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp GACAATAGGGAGCTGGGCCAATTAGGGGGACACTCAATACCCCAATaGGTCCTAGAGATCCTATTTCCAAATTCCATTCACCACCATAAG +
Preference number: 1 (lower is better)
Translates to: DNRELGQLGGHSIPQ*VLEILFPNSIHHHK
Trigger: CTTATGGTGGTGAATGGAATTTGGAAATAGGATCTCTAGGACCCATTGGGGTATTGAGTGTCCCCCTAATTGGCCCAGCTCCCTATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 90 bp TATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTaGTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCC +
Preference number: 1 (lower is better)
Translates to: YWSLLPPQICQYQLL*WSLKAWCLSLYIPS
Trigger: GGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR CCA 90 bp CCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTAAAGGCTTaGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCAGG +
Preference number: 1 (lower is better)
Translates to: PQICQYQLLCWSLKA*CLSLYIPSHPFLCR
Trigger: CCTGCACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR CCA 90 bp ACTAAAACCTTTGATGGTCCCCTTTGCCACAAAGCCATGGAAATATaGCTGTGTGGGAAATGGTCCAGGGAGCTCATGAATAGCTCAGTT +
Preference number: 1 (lower is better)
Translates to: TKTFDGPLCHKAMEI*LCGKWSRELMNSSV
Trigger: AACTGAGCTATTCATGAGCTCCCTGGACCATTTCCCACACAGCCATATTTCCATGGCTTTGTGGCAAAGGGGACCATCAAAGGTTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp TTTAGGGTTATAGTGCTATTGGAGTCCTTGTTTCTAGAAGGAAACTaGGGAATCCAGAAGCTACGGAGAGCGTCCCTTGGGGTAGTAATG +
Preference number: 1 (lower is better)
Translates to: FRVIVLLESLFLEGN*GIQKLRRASLGVVM
Trigger: CATTACTACCCCAAGGGACGCTCTCCGTAGCTTCTGGATTCCCCAGTTTCCTTCTAGAAACAAGGACTCCAATAGCACTATAACCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 90 bp TGTAAACACTACTCTAACCGAACTAAAACCTTTGATGGTCCCCTTTaGCACAAAGCCATGGAAATATGGCTGTGTGGGAAATGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: CKHYSNRTKTFDGPL*HKAMEIWLCGKWSR
Trigger: CCTGGACCATTTCCCACACAGCCATATTTCCATGGCTTTGTGGCAAAGGGGACCATCAAAGGTTTTAGTTCGGTTAGAGTAGTGTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp GGTCCCCTTTGCCACAAAGCCATGGAAATATGGCTGTGTGGGAAATaGTCCAGGGAGCTCATGAATAGCTCAGTTGTATTTCAGAATAAA +
Preference number: 1 (lower is better)
Translates to: GPLCHKAMEIWLCGK*SRELMNSSVVFQNK
Trigger: TTTATTCTGAAATACAACTGAGCTATTCATGAGCTCCCTGGACCATTTCCCACACAGCCATATTTCCATGGCTTTGTGGCAAAGGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 90 bp GTGTATTGGACATCACTGAACACACGTGCCTATCACTGTAAGCTTTaGCAGCATCCTGTGGTTAGCAATAATCAGCAGATGATGGAGAAT +
Preference number: 1 (lower is better)
Translates to: VYWTSLNTRAYHCKL*QHPVVSNNQQMMEN
Trigger: ATTCTCCATCATCTGCTGATTATTGCTAACCACAGGATGCTGGCAAAGCTTACAGTGATAGGCACGTGTGTTCAGTGATGTCCAATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp GTGCTTCTTGTTGGGCTTAATGTTTGTGAGCAAGCCCCTGCTATTTaGATTAAGTATTGGTCCCAAGTTCTGGGCTCCAGTATAGTTCTA +
Preference number: 1 (lower is better)
Translates to: VLLVGLNVCEQAPAI*IKYWSQVLGSSIVL
Trigger: TAGAACTATACTGGAGCCCAGAACTTGGGACCAATACTTAATTCAAATAGCAGGGGCTTGCTCACAAACATTAAGCCCAACAAGAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp GAACTAATAGTTCTTCACGACCCATTTTATCTTCGTTCATGGGCATaGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACACATGT +
Preference number: 1 (lower is better)
Translates to: ELIVLHDPFYLRSWA*LGSDFSDLDHIHTC
Trigger: ACATGTGTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAGATAAAATGGGTCGTGAAGAACTATTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp TTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACTaGGAAAGCCCACCTCTCAAGAGTCCACATACATGTTGGCAGATT +
Preference number: 1 (lower is better)
Translates to: FYSLPLGITSLFSMY*ESPPLKSPHTCWQI
Trigger: AATCTGCCAACATGTATGTGGACTCTTGAGAGGTGGGCTTTCCCAGTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp ACTTATGAACTAATAGTTCTTCACGACCCATTTTATCTTCGTTCATaGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCAC +
Preference number: 1 (lower is better)
Translates to: TYELIVLHDPFYLRS*AWLGSDFSDLDHIH
Trigger: GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAGATAAAATGGGTCGTGAAGAACTATTAGTTCATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp TCATTGGGAAGCACTTTCTCATGGCAAGATTCTCAAAACGAGAGATaGAAAGTCCCGCCACGCCATAAAACTGCATTTAATTCCAGAATA +
Preference number: 1 (lower is better)
Translates to: SLGSTFSWQDSQNER*KVPPRHKTAFNSRI
Trigger: TATTCTGGAATTAAATGCAGTTTTATGGCGTGGCGGGACTTTCCATCTCTCGTTTTGAGAATCTTGCCATGAGAAAGTGCTTCCCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp AGCATGTACTGGGAAAGCCCACCTCTCAAGAGTCCACATACATGTTaGCAGATTTCTTTGAGCTCTACACATTTCATTATATGGATCATC +
Preference number: 1 (lower is better)
Translates to: SMYWESPPLKSPHTC*QISLSSTHFIIWII
Trigger: GATGATCCATATAATGAAATGTGTAGAGCTCAAAGAAATCTGCCAACATGTATGTGGACTCTTGAGAGGTGGGCTTTCCCAGTACATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp AAAGCCCACCTCTCAAGAGTCCACATACATGTTGGCAGATTTCTTTaGGCTCTACACATTTCATTATATGGATCATCAAAGGTGCCATTC +
Preference number: 1 (lower is better)
Translates to: KAHLSRVHIHVGRFL*ALHISLYGSSKVPF
Trigger: GAATGGCACCTTTGATGATCCATATAATGAAATGTGTAGAGCTCAAAGAAATCTGCCAACATGTATGTGGACTCTTGAGAGGTGGGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp ACTGTAAGCTTTGCCAGCATCCTGTGGTTAGCAATAATCAGCAGATaGTGGAGAATGGCCAGGAGACAAAAGGAAAAAGTAGTATTCTAT +
Preference number: 1 (lower is better)
Translates to: TVSFASILWLAIISR*WRMARRQKEKVVFY
Trigger: ATAGAATACTACTTTTTCCTTTTGTCTCCTGGCCATTCTCCATCATCTGCTGATTATTGCTAACCACAGGATGCTGGCAAAGCTTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp CATGTTTCTGATACTAAGGGTAGTATGCACTGTTTATCTGAAGAATaGGGTGACCAGTTACCAGTATACGCTATGAAAGAACAGCTTGTG +
Preference number: 1 (lower is better)
Translates to: HVSDTKGSMHCLSEE*GDQLPVYAMKEQLV
Trigger: CACAAGCTGTTCTTTCATAGCGTATACTGGTAACTGGTCACCTCATTCTTCAGATAAACAGTGCATACTACCCTTAGTATCAGAAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 90 bp TTTCTAGAGCCTTTCTTTTCAACACTCTTCTGGAGGGTCTACTTATaGACTAATAGTTCTTCACGACCCATTTTATCTTCGTTCATGGGC +
Preference number: 1 (lower is better)
Translates to: FLEPFFSTLFWRVYL*TNSSSRPILSSFMG
Trigger: GCCCATGAACGAAGATAAAATGGGTCGTGAAGAACTATTAGTTCATAAGTAGACCCTCCAGAAGAGTGTTGAAAAGAAAGGCTCTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 90 bp GCAAAATCCATCTATGGGCATCAAAAGACAGAAACAGGAAACTGCTaGAAGAAGAGTCTGACAATCTTTATAAATGCATACATCCATTCG +
Preference number: 1 (lower is better)
Translates to: AKSIYGHQKTETGNC*KKSLTIFINAYIHS
Trigger: CGAATGGATGTATGCATTTATAAAGATTGTCAGACTCTTCTTCCAGCAGTTTCCTGTTTCTGTCTTTTGATGCCCATAGATGGATTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGCCCCCTCAGAGCCCCTaGTTGATGTTAGATCCACCC +
Preference number: 2 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRPPQSP*LMLDPP
Trigger: GGGTGGATCTAACATCAACCAGGGGCTCTGAGGGGG...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp ATGACTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCAGACCTCCACACCAGCTaGTTGGGTCTTCCCATCCTT +
Preference number: 2 (lower is better)
Translates to: MTDESLGKTSTPAAWVFPDLHTS*LGLPIL
Trigger: AAGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTC...TGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGATCCACCCCAGATGGTaGTCCACAGCTGCAATGAGC +
Preference number: 2 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWIHPRW*STAAMS
Trigger: GCTCATTGCAGCTGTGGACCACCATCTGGGGTGGAT...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGTGCAGGTGCTCTACCTaGCAGCCATTCTGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRCRCST*QPFWKK
Trigger: CTTTTTCCAGAATGGCTGCCAGGTAGAGCACCTGCA...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACACCACCATAAGCCACTaGGGAGGTCCTGACCTTGGT +
Preference number: 2 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHTTISH*GGPDLG
Trigger: ACCAAGGTCAGGACCTCCCCAGTGGCTTATGGTGGT...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp ATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATaGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGG +
Preference number: 2 (lower is better)
Translates to: IEWLQIHLELPPLMP*QFPMHPAPASMVPW
Trigger: CCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp CTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACGGCTCTCTTCCCCAATaGTTGCTGGACTCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: LLCWSLKAWCLSLYIPSHGSLPQ*LLDSWV
Trigger: TACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCC...GTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR GCA 90 bp AGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATCCTTCAGCAGGACTCCTGGGTATATaGTTGAAAATGCCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: SHWERPPHQLLGSSHPSAGLLGI*LKMPAH
Trigger: ATGAGCTGGCATTTTCAAGCATATACCCAGGAGTCC...TGCTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR TCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACCTGTGTGAGTGCTCTTaGTGTAAGAAGCACGGCAGA +
Preference number: 2 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHLCECS*CKKHGR
Trigger: TCTGCCGTGCTTCTTACATCAAGAGCACTCACACAG...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTGTTCTGGGCAAGGATTaGCAGCCTCAGGCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPVLGKD*QPQALF
Trigger: GAAGAGAGCCTGAGGCTGGCAATCCTTGCCCAGAAC...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR GCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACTTACTTCATCATCACTaGCCCAGGGGCCATCCTAAC +
Preference number: 2 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHLLHHH*PRGHPN
Trigger: GTTAGGATGGCCCCTGGGGCAGTGATGATGAAGTAA...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp CTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTTGGGCACCTCTCTCTTaGTATCCTCCTCCTCCATCA +
Preference number: 2 (lower is better)
Translates to: LLESKGLVSFSIHPIPPFWAPLS*YPPPPS
Trigger: TGATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCA...AAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR-3UTR TCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCCACTGGGGAGGTCCTaGCCTTGGTCACATGAAGCG +
Preference number: 2 (lower is better)
Translates to: LLLSREGPTEFDIIPENPPLGRS*PWSHEA
Trigger: CGCTTCATGTGACCAAGGTCAGGACCTCCCCAGTGG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATATTCTCACCGAAATGTTaGACATCACCAACTCCATCT +
Preference number: 2 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIFSPKC*TSPTPS
Trigger: AGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAA...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR GCA 90 bp AGTAAGATATGGTGGCCTGTGAACAAGCAGGTGACCAAAGTTCTGGGCAAGGATGCCAGCCTTGTCTGCTaGTTTTCAATCCCGACTCTT +
Preference number: 2 (lower is better)
Translates to: SKIWWPVNKQVTKVLGKDASLVC*FSIPTL
Trigger: AAGAGTCGGGATTGAAAAGCAGCAGACAAGGCTGGC...ATCCTTGCCCAGAACTTTGGTCACCTGCTTGTTCACAGGCCACCATATCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR CAA 90 bp ATAAAGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTaGGGCACCTCTCTCTTGGTATCCTCCTCCTCCATCAGGATCTTC +
Preference number: 2 (lower is better)
Translates to: IKFSPKCCTSPTPSS*GTSLLVSSSSIRIF
Trigger: GAAGATCCTGATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR-3UTR TCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACAGCAGCATGGAGGAGTaGGCACCTGCACGCACCACG +
Preference number: 2 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYSSMEE*APARTT
Trigger: CGTGGTGCGTGCAGGTGCTCACTCCTCCATGCTGCT...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp TTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTGGACTCCTGGGTATATaGTTGAAAATGCCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: LEPPPSSDMSISATLLESGLLGI*LKMPAH
Trigger: ATGAGCTGGCATTTTCAAGCATATACCCAGGAGTCC...AGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR GCA 90 bp AAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGGTTCTGGGCAAGGATTaGCAGCCTCAGGCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: KDFIQNHKPCELGVVVLEVLGKD*QPQALF
Trigger: GAAGAGAGCCTGAGGCTGGCAATCCTTGCCCAGAAC...CTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR GCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGGTTTCCCATGCATCCTaGGCCTGCTTCCATGGTGCC +
Preference number: 2 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRVSHAS*ACFHGA
Trigger: GGCACCATGGAAGCAGGCGCAGGATGCATGGGAAAC...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp ATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTTCCCCAATGATTGCTaGACTCCTGGGTATATGCTT +
Preference number: 2 (lower is better)
Translates to: IGASSLLRYVNISYSAGVFPNDC*TPGYML
Trigger: AAGCATATACCCAGGAGTCCAGCAATCATTGGGGAA...GACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTAATCCTAGAGAGACCTaGTGCTTGGCTCTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFNPRET*CLALFP
Trigger: GGGGAAAAGAGCCAAGCACCAGGTCTCTCTAGGATT...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATaGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTG +
Preference number: 2 (lower is better)
Translates to: DFIQNHKPCELGVVV*EPPPSSDMSISATL
Trigger: CAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR CAA 90 bp GAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATaGGGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCAGATATGTCA +
Preference number: 2 (lower is better)
Translates to: ETLCKDFIQNHKPCE*GVVVLEPPPSSDMS
Trigger: TGACATATCTGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR TCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAGGTCCACAGCTGCAATaGGCCAGTCTTTTTCACCAG +
Preference number: 2 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEEGPQLQ*ASLFHQ
Trigger: CTGGTGAAAAAGACTGGCTCATTGCAGCTGTGGACC...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp GCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGCTCTTCCCCAATGATTaGTGGACTCCTGGGTATATG +
Preference number: 2 (lower is better)
Translates to: ARETLCKDFIQNHKPCELLFPND*WTPGYM
Trigger: CATATACCCAGGAGTCCAGCAATCATTGGGGAAGAG...CAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAACCAGGAATGTGTTTCTaGTTCAACTTTTTCACCGGC +
Preference number: 2 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQPGMCF*FNFFTG
Trigger: GCCGGTGAAAAAGTTGAACCAGAAACACATTCCTGG...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp TCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTAAAGGCTaGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCAG +
Preference number: 2 (lower is better)
Translates to: SSDMSISATLLESKG*VSFSIHPIPPFLVQ
Trigger: CTGCACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR TCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAAGGACTTTGCCAAAATaGTGCAGGTGCTCTACCTGG +
Preference number: 2 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEERTLPK*CRCSTW
Trigger: CCAGGTAGAGCACCTGCATCATTTTGGCAAAGTCCT...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAAGGCATGCAGCAAACATaGATATCTATCTCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQGMQQT*ISISCW
Trigger: CCAACAAGAGATAGATATGCATGTTTGCTGCATGCC...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCATTGCAGTTTCCCATaGATCCTGCGCCTGCTTCCA +
Preference number: 2 (lower is better)
Translates to: LLLSREGPTEFDIIPENPHCSFP*ILRLLP
Trigger: TGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTGCTTCCATGGTGCCATaGATAAGGGGCCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: LLLSREGPTEFDIIPENPASMVP*IRGLPL
Trigger: AAGTGGAAGGCCCCTTATCCATGGCACCATGGAAGC...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp TCACTTGGTGACACACGAGTCATCCTAAATATCCCCGAGGTAGTCTaGTTTTCAAGGAGTTATAGAATGGCTCCAAATCCACTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: SLGDTRVILNIPEVV*FSRSYRMAPNPLGA
Trigger: AGCTCCAAGTGGATTTGGAGCCATTCTATAACTCCTTGAAAACAAGACTACCTCGGGGATATTTAGGATGACTCGTGTGTCACCAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTCTGACCTTGGTCACATaGAGCGTGCTTTCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLLTLVT*SVLSSL
Trigger: AAGGGAAGAAAGCACGCTTCATGTGACCAAGGTCAG...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGTTCCAAGATCAGGCTTaGAGACCCCACTCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: PYDWGANQPRFANQSALKFQDQA*RPHSKE
Trigger: CTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAA...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTTTCTCACCGAAATGTTaGACATCACCAACTCCATCT +
Preference number: 2 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPFSPKC*TSPTPS
Trigger: AGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAA...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR GCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACCCTAGAGAGACCTGGTaGTTGGCTCTTTTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYPRETW*LALFPL
Trigger: GAGGGGGAAAAGAGCCAAGCACCAGGTCTCTCTAGG...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAACTCACAGCCCTGAGATaGGTGGTCCTGTTCAGGACA +
Preference number: 2 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKLTALR*VVLFRT
Trigger: TGTCCTGAACAGGACCACGCATCTCAGGGCTGTGAG...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp AAAGGACAAAATCATGTAAACATTTCATGGAACAGTCAGCAGCCCTaGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTG +
Preference number: 2 (lower is better)
Translates to: KGQNHVNISWNSQQP*GVTGILCRYLSTHL
Trigger: CAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCTGACTGTTCCATGAAATGTTTACATGATTTTGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp TCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAACCTTaGATGGTCCCCTTTGCCACAAAGCCATGGAAATATGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SKFKPVNTTLTELKP*MVPFATKPWKYGCV
Trigger: CACACAGCCATATTTCCATGGCTTTGTGGCAAAGGGGACCATCAAAGGTTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp AGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCATCAGGATCTTCTGCTaGATCTCAAAGGATAAACTG +
Preference number: 2 (lower is better)
Translates to: SLKAWCLSLYIPSHPFLCIRIFC*ISKDKL
Trigger: CAGTTTATCCTTTGAGATTCAGCAGAAGATCCTGAT...GCACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR-3UTR TCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAATCCTTCTGTATCCATaGAATCCTGGTGGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEEILLYP*NPGGLS
Trigger: AGAGAGACCACCAGGATTTCATGGATACAGAAGGAT...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp TCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATATGGTGGCAGTGCCAGCCTTGTCTaGTGCTTTTCAATCCCGACT +
Preference number: 2 (lower is better)
Translates to: SGLNKTSAYDFSEVRYGGSASLV*CFSIPT
Trigger: AGTCGGGATTGAAAAGCAGCAGACAAGGCTGGCACT...GCCACCATATCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR-3UTR GCA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTATAAACTGGGATCAGTaGCAGCCTTGTCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSINWDQ*QPCLLL
Trigger: AAGCAGCAGACAAGGCTGGCACTGATCCCAGTTTAT...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR-3UTR CCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTTGGAGTCTAAAGGCTTaGTGTCTTTCTCTATACATC +
Preference number: 2 (lower is better)
Translates to: LSARETLCKDFIQNHKPCWSLKA*CLSLYI
Trigger: GATGTATAGAGAAAGACACCAAGCCTTTAGACTCCA...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CCA 90 bp AAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGTATCAGCTACTCTGCTaGAGTCTAAAGGCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: KDFIQNHKPCELGVVVLEYQLLC*SLKAWC
Trigger: ACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATA...CTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR CAA 90 bp AAATATGTACTGAAAACCTCTGACAATAAAGTTCTCACCGAAATGTaGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: KYVLKTSDNKVLTEM*HITNSIFLGHLSLG
Trigger: ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTTATTGTCAGAGGTTTTCAGTACATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR TCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGCTCTCAGAAAAGTGGTaGCATCCAACAATCCTAGAG +
Preference number: 2 (lower is better)
Translates to: PYDWGANQPRFANQSALKLSEKW*HPTILE
Trigger: CTCTAGGATTGTTGGATGTCACCACTTTTCTGAGAG...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTCATCTTAGTGATAAATaGGTCCTACTCTCTCAGAAA +
Preference number: 2 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFHLSDK*VLLSQK
Trigger: TTTCTGAGAGAGTAGGACTCATTTATCACTAAGATG...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGAGGCCCTACAGAATTTaGCATTATCCCAGAAAACCC +
Preference number: 2 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRRPYRI*HYPRKP
Trigger: GGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAACAAAGGGTAAAAAGTaGGGAAATGATCTAGCCCCT +
Preference number: 2 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEETKGKK*GNDLAP
Trigger: AGGGGCTAGATCATTTCCCCACTTTTTACCCTTTGT...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp GAAAGCCCACCTCTCAAGAGTCCACATACATGTTGGCAGATTTCTTaGAGCTCTACACATTTCATTATATGGATCATCAAAGGTGCCATT +
Preference number: 2 (lower is better)
Translates to: ESPPLKSPHTCWQIS*SSTHFIIWIIKGAI
Trigger: AATGGCACCTTTGATGATCCATATAATGAAATGTGTAGAGCTCAAAGAAATCTGCCAACATGTATGTGGACTCTTGAGAGGTGGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGTCTCTGCAAGCAACATaGAAAATCCATCTATGGGCA +
Preference number: 2 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRSLQAT*KIHLWA
Trigger: TGCCCATAGATGGATTTTGCATGTTGCTTGCAGAGA...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGCACTCAATACCCCAATaGGTCCTAGAGATCCTATTT +
Preference number: 2 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRHSIPQ*VLEILF
Trigger: AAATAGGATCTCTAGGACCCATTGGGGTATTGAGTG...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACCTTCGTTCATGGGCATaGCTTGGTAGTGACTTCTCA +
Preference number: 2 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYLRSWA*LGSDFS
Trigger: TGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTTTTTATCTTCGTTCATaGGCATGGCTTGGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLFYLRS*AWLGSD
Trigger: GTCACTACCAAGCCATGCCCATGAACGAAGATAAAA...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTACCAGTATACGCTATaGAAGAACAGCTTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: LLLSREGPTEFDIIPENPYQYTL*KNSLCL
Trigger: CAAACACAAGCTGTTCTTTCATAGCGTATACTGGTA...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAATTATCATGCAAACACTaGGGTGCACTTAAATGTTAC +
Preference number: 2 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEELSCKH*GALKCY
Trigger: GTAACATTTAAGTGCACCTCAGTGTTTGCATGATAA...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGTTGGCAGTTGCAGAATaGGTCATGAACCTAAAATCT +
Preference number: 2 (lower is better)
Translates to: PYDWGANQPRFANQSALKLAVAE*VMNLKS
Trigger: AGATTTTAGGTTCATGACTCATTCTGCAACTGCCAA...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAATGGTCACATGAAGCGTaGTTTCTTCCCTTGGACTTA +
Preference number: 2 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKWSHEA*FLPLDL
Trigger: TAAGTCCAAGGGAAGAAAGCACGCTTCATGTGACCA...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTGTAATTTTATCTAAATaGCCCTGTGAGGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLVILSK*PCEEGR
Trigger: TCTCCCTTCCTCACAGGGCCATTTAGATAAAATTAC...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGAGATGGATCATTACCTaGGCTCAGATTTTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: PYDWGANQPRFANQSALKRWIIT*AQILCF
Trigger: AAAGCACAAAATCTGAGCCCAGGTAATGATCCATCT...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp TCCCAAGTTCTGGGCTCCAGTATAGTTCTAATGATTGGATGTAGGTaGAGGGGTAGAATAATGCATTTGAAAAGAGTAAGAAGCAATAAC +
Preference number: 2 (lower is better)
Translates to: SQVLGSSIVLMIGCR*RGRIMHLKRVRSNN
Trigger: GTTATTGCTTCTTACTCTTTTCAAATGCATTATTCTACCCCTCAACCTACATCCAATCATTAGAACTATACTGGAGCCCAGAACTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACACAGAAACAGGAAACTaGTGGAAGAAGAGTCTGACA +
Preference number: 2 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYTETGN*WKKSLT
Trigger: TGTCAGACTCTTCTTCCAGCAGTTTCCTGTTTCTGT...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR TCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAATGGAGGGTCTACTTATaGACTAATAGTTCTTCACGA +
Preference number: 2 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKWRVYL*TNSSSR
Trigger: TCGTGAAGAACTATTAGTTCATAAGTAGACCCTCCA...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACATCTGCAGGATGGACTaGTTTCATGTAGCTCTTTTA +
Preference number: 2 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYICRMD*FHVALL
Trigger: TAAAAGAGCTACATGAAACCAGTCCATCCTGCAGAT...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp GACAACAAAAATAAAACCCTGAGGGTAGACCAGGGATTTCAGAGCTaGTCATTAGCATTTAGCATCAGAATTGAAGGAAAGTTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: DNKNKTLRVDQGFQS*SLAFSIRIEGKFRK
Trigger: TTTTCTAAACTTTCCTTCAATTCTGATGCTAAATGCTAATGACAAGCTCTGAAATCCCTGGTCTACCCTCAGGGTTTTATTTTTGTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 90 bp CATGTTCTATGCTATGCAAAAGAAACTTCCTGTCAGTTTGGATATTaGATGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCT +
Preference number: 2 (lower is better)
Translates to: HVLCYAKETSCQFGY*MLSFLFTSSWHNKS
Trigger: AGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCATCAAATATCCAAACTGACAGGAAGTTTCTTTTGCATAGCATAGAACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR GCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACGACAATCTTTATAAATaGATACATCCATTCGGGACT +
Preference number: 2 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYDNLYK*IHPFGT
Trigger: AGTCCCGAATGGATGTATGCATTTATAAAGATTGTC...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp TTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATaGATAAGGGGCCTTCCACTTAGCGTTGTGTCCCAC +
Preference number: 3 (lower is better)
Translates to: FPMHPAPASMVP*IRGLPLSVVSH
Trigger: GTGGGACACAACGCTAAGTGGAAGGCCCCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp ACCACATCCACACATGTATACTGTCCCCAGGAGGACTaGGGGAGCCAGGACATGAACAGCAGAGTCAGGAAT +
Preference number: 3 (lower is better)
Translates to: TTSTHVYCPQED*GSQDMNSRVRN
Trigger: ATTCCTGACTCTGCTGTTCATGTCCTGGCTCCCCCAGTCCTCCTGGGGACAGTATACATGTGTGGATGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAAGCCTTCCACTTAGCGTaGTGTCCCACAGTGCAGACC +
Preference number: 3 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKAFHLA*CPTVQT
Trigger: GGTCTGCACTGTGGGACACAACGCTAAGTGGAAGGC...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp AGTTCACTCTGTGTGTCCCAAGGCAATGGTTGTAAGTaGCAACGCTATGGTGCCAAACACCAGGGAGCAGCC +
Preference number: 3 (lower is better)
Translates to: SSLCVSQGNGCK*QRYGAKHQGAA
Trigger: GGCTGCTCCCTGGTGTTTGGCACCATAGCGTTGTCACTTACAACCATTGCCTTGGGACACACAGAGTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTCTCCACACCAGCTGCTaGGGTCTTCCCATCCTTCAG +
Preference number: 3 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPLHTSC*GLPILQ
Trigger: CTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGAG...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CAA 90 bp CTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTTTGGGCACCTCTCTCTaGGTATCCTCCTCCTCCATC +
Preference number: 3 (lower is better)
Translates to: LLESKGLVSFSIHPIPPFLGTSL*VSSSSI
Trigger: GATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCAA...AAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR TCA 72 bp AATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTaGCCTTGGTCACATGAAGCGTGCTTTCTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: NSIHHHKPLGRS*PWSHEACFLPL
Trigger: CAAGGGAAGAAAGCACGCTTCATGTGACCAAGGTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp GACATGAACAGCAGAGTCAGGAATCACTCACAGCCCTaGGATGCGTGGTCCTGTTCAGGACAGAAAGACCAT +
Preference number: 3 (lower is better)
Translates to: DMNSRVRNHSQP*DAWSCSGQKDH
Trigger: ATGGTCTTTCTGTCCTGAACAGGACCACGCATCTCAGGGCTGTGAGTGATTCCTGACTCTGCTGTTCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp GAACCTAAAATCTGTTTTCCCTCTGTCCCACATGCCTaGGTTCTCCTGTCTGGTCTCACGGTCAAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: EPKICFPSVPHA*VLLSGLTVKEQ
Trigger: CTGCTCCTTGACCGTGAGACCAGACAGGAGAACTCAGGCATGTGGGACAGAGGGAAAACAGATTTTAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 72 bp AAGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTaGTGGACTCCTGGGTATATGCTTGAAAATGCCAGC +
Preference number: 3 (lower is better)
Translates to: KDCQPQALFPND*WTPGYMLENAS
Trigger: GCTGGCATTTTCAAGCATATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR GCA 72 bp AGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTaGCAAAATGATGCAGGTGCTCTACCTGGCAGCCAT +
Preference number: 3 (lower is better)
Translates to: RSGLKTPLQRGL*QNDAGALPGSH
Trigger: ATGGCTGCCAGGTAGAGCACCTGCATCATTTTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp GATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTaGACTCCTGGGTATATGCTTGAAAATGCCAGCTCA +
Preference number: 3 (lower is better)
Translates to: DCQPQALFPNDC*TPGYMLENASS
Trigger: TGAGCTGGCATTTTCAAGCATATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR TCA 72 bp CTCTTGGTATCCTCCTCCTCCATCAGGATCTTCTGCTaGATCTCAAAGGATAAACTGGGATCAGTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: LLVSSSSIRIFC*ISKDKLGSVPA
Trigger: GGCTGGCACTGATCCCAGTTTATCCTTTGAGATTCAGCAGAAGATCCTGATGGAGGAGGAGGATACCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR TCA 72 bp CTTGAAGACCCCACTCCAAAGAGGACTTTGCCAAAATaGTGCAGGTGCTCTACCTGGCAGCCATTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: LEDPTPKRTLPK*CRCSTWQPFWK
Trigger: TTTCCAGAATGGCTGCCAGGTAGAGCACCTGCATCATTTTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp TCCTATTTCCAAATTCCATTCACCACCATAAGCCACTaGGGAGGTCCTGACCTTGGTCACATGAAGCGTGCT +
Preference number: 3 (lower is better)
Translates to: SYFQIPFTTISH*GGPDLGHMKRA
Trigger: AGCACGCTTCATGTGACCAAGGTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp TTACTGGCATCCTGTGTAGATACTTGTCAACACACCTaGCCTCATAGCACCAAACACCTGGACAAAGCCGAG +
Preference number: 3 (lower is better)
Translates to: LLASCVDTCQHT*PHSTKHLDKAE
Trigger: CTCGGCTTTGTCCAGGTGTTTGGTGCTATGAGGCCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp CCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTaGATTGGGAGTAGTCGTATTGGAGCCTCCTCCCTC +
Preference number: 3 (lower is better)
Translates to: PLQRFHPEPQTL*IGSSRIGASSL
Trigger: GAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR CCA 72 bp GAGCTGGGCCAATTAGGGGGACACTCAATACCCCAATaGGTCCTAGAGATCCTATTTCCAAATTCCATTCAC +
Preference number: 3 (lower is better)
Translates to: ELGQLGGHSIPQ*VLEILFPNSIH
Trigger: GTGAATGGAATTTGGAAATAGGATCTCTAGGACCCATTGGGGTATTGAGTGTCCCCCTAATTGGCCCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp AAAGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCGTTCTCACCGAAATGTaGCACATCACCAACTCCATC +
Preference number: 3 (lower is better)
Translates to: KVLTEMLHITNSIFLGHLVLTEM*HITNSI
Trigger: GATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC...GAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CAA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCCTCAGAGCCCCTGGTaGATGTTAGATCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: LLLSREGPTEFDIIPENPPQSPW*MLDPPQ
Trigger: CTGGGGTGGATCTAACATCAACCAGGGGCTCTGAGG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCATTGGGAGTAGTCGTATaGGAGCCTCCTCCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: FILFECQGNPLQRFHPEPLGVVV*EPPPSS
Trigger: TGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAA...TGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CAA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGAGAGAGACCTGGTGCTaGGCTCTTTTCCCCCTCAGA +
Preference number: 3 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRRETWC*ALFPLR
Trigger: TCTGAGGGGGAAAAGAGCCAAGCACCAGGTCTCTCT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGAACAGTCAGCAGCCCTaGGGTGTTACTGGCATCCTG +
Preference number: 3 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRNSQQP*GVTGIL
Trigger: CAGGATGCCAGTAACACCCAAGGGCTGCTGACTGTT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 72 bp TTGATGTTAGATCCACCCCAGATGGTGGTCCACAGCTaGAATGAGCCAGTCTTTTTCACCAGGAATGTGTTT +
Preference number: 3 (lower is better)
Translates to: LMLDPPQMVVHS*NEPVFFTRNVF
Trigger: AAACACATTCCTGGTGAAAAAGACTGGCTCATTGCAGCTGTGGACCACCATCTGGGGTGGATCTAACATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp GTTGGGCTTAATGTTTGTGAGCAAGCCCCTGCTATTTaGATTAAGTATTGGTCCCAAGTTCTGGGCTCCAGT +
Preference number: 3 (lower is better)
Translates to: VGLNVCEQAPAI*IKYWSQVLGSS
Trigger: ACTGGAGCCCAGAACTTGGGACCAATACTTAATTCAAATAGCAGGGGCTTGCTCACAAACATTAAGCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 72 bp ACATCACTGAACACACGTGCCTATCACTGTAAGCTTTaGCAGCATCCTGTGGTTAGCAATAATCAGCAGATG +
Preference number: 3 (lower is better)
Translates to: TSLNTRAYHCKL*QHPVVSNNQQM
Trigger: CATCTGCTGATTATTGCTAACCACAGGATGCTGGCAAAGCTTACAGTGATAGGCACGTGTGTTCAGTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp GCAATGAGCCAGTCTTTTTCACCAGGAATGTGTTTCTaGTTCAACTTTTTCACCGGCTCAAACACAACACCC +
Preference number: 3 (lower is better)
Translates to: AMSQSFSPGMCF*FNFFTGSNTTP
Trigger: GGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCAGAAACACATTCCTGGTGAAAAAGACTGGCTCATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp GTTCTTCACGACCCATTTTATCTTCGTTCATGGGCATaGCTTGGTAGTGACTTCTCAGATCTAGACCACATC +
Preference number: 3 (lower is better)
Translates to: VLHDPFYLRSWA*LGSDFSDLDHI
Trigger: GATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAGATAAAATGGGTCGTGAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp CTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACTaGGAAAGCCCACCTCTCAAGAGTCCACATACATGT +
Preference number: 3 (lower is better)
Translates to: LPLGITSLFSMY*ESPPLKSPHTC
Trigger: ACATGTATGTGGACTCTTGAGAGGTGGGCTTTCCCAGTACATGCTAAACAGACTTGTTATGCCAAGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 72 bp TACTCTAACCGAACTAAAACCTTTGATGGTCCCCTTTaGCACAAAGCCATGGAAATATGGCTGTGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: YSNRTKTFDGPL*HKAMEIWLCGK
Trigger: TTTCCCACACAGCCATATTTCCATGGCTTTGTGGCAAAGGGGACCATCAAAGGTTTTAGTTCGGTTAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp CTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTaGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATC +
Preference number: 3 (lower is better)
Translates to: LPPQICQYQLLC*SLKAWCLSLYI
Trigger: GATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR CCA 72 bp AGCCAGGTCTTAAATTGTTTTACAGAACGTATAGGGTaGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTT +
Preference number: 3 (lower is better)
Translates to: SQVLNCFTERIG*KTKSWGCGCAF
Trigger: AAAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAACAATTTAAGACCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGTTCTCACCGAAATGTaGCACATCACCAACTCCATC +
Preference number: 3 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSVLTEM*HITNSI
Trigger: GATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
3UTR-3UTR CAA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCTAGGTATTTCTCACTaGGTGACACACGAGTCATCC +
Preference number: 3 (lower is better)
Translates to: LLLSREGPTEFDIIPENPLGISH*VTHESS
Trigger: GGATGACTCGTGTGTCACCAAGTGAGAAATACCTAG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 72 bp TATGGATCATCAAAGGTGCCATTCCTAGATAAGTTCTaGCATCCTACATCACACTGTTGGGAAATAAGCCCA +
Preference number: 3 (lower is better)
Translates to: YGSSKVPFLDKF*HPTSHCWEISP
Trigger: TGGGCTTATTTCCCAACAGTGTGATGTAGGATGGCAGAACTTATCTAGGAATGGCACCTTTGATGATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp AGCACTTTCTCATGGCAAGATTCTCAAAACGAGAGATaGAAAGTCCCGCCACGCCATAAAACTGCATTTAAT +
Preference number: 3 (lower is better)
Translates to: STFSWQDSQNER*KVPPRHKTAFN
Trigger: ATTAAATGCAGTTTTATGGCGTGGCGGGACTTTCCATCTCTCGTTTTGAGAATCTTGCCATGAGAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTATGCATATCTATCTCTaGTTGGGCCCCACGCTAAAA +
Preference number: 3 (lower is better)
Translates to: LLLSREGPTEFDIIPENPMHIYL*LGPTLK
Trigger: TTTTAGCGTGGGGCCCAACAAGAGATAGATATGCAT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACGTTCATGGGCATGGCTaGGTAGTGACTTCTCAGATC +
Preference number: 3 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYVHGHG*VVTSQI
Trigger: GATCTGAGAAGTCACTACCAAGCCATGCCCATGAAC...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAATTCCAAGATCAGGCTaGAAGACCCCACTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKIPRSG*KTPLQR
Trigger: TCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAAT...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTATCCCCGAGGTAGTCTaGTTTTCAAGGAGTTATAGA +
Preference number: 3 (lower is better)
Translates to: LLLSREGPTEFDIIPENPIPEVV*FSRSYR
Trigger: TCTATAACTCCTTGAAAACAAGACTACCTCGGGGAT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAATCCTGTGTAGATACTaGTCAACACACCTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKILCRY*STHLAS
Trigger: TGAGGCCAGGTGTGTTGACAAGTATCTACACAGGAT...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACCATATCTATCTCTTGTaGGGCCCCACGCTAAAAAGA +
Preference number: 3 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYHIYLL*GPTLKR
Trigger: TCTTTTTAGCGTGGGGCCCAACAAGAGATAGATATG...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR GCA 72 bp AAACTGGGAAGCATGTTTCTGATACTAAGGGTAGTATaGACTGTTTATCTGAAGAATGAGGTGACCAGTTAC +
Preference number: 3 (lower is better)
Translates to: KLGSMFLILRVV*TVYLKNEVTSY
Trigger: GTAACTGGTCACCTCATTCTTCAGATAAACAGTGCATACTACCCTTAGTATCAGAAACATGCTTCCCAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp CTGAAGAATGAGGTGACCAGTTACCAGTATACGCTATaGAAGAACAGCTTGTGTTTGAAACATCTTAGTGAT +
Preference number: 3 (lower is better)
Translates to: LKNEVTSYQYTL*KNSLCLKHLSD
Trigger: ATCACTAAGATGTTTCAAACACAAGCTGTTCTTTCATAGCGTATACTGGTAACTGGTCACCTCATTCTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp CCTTTCTTTTCAACACTCTTCTGGAGGGTCTACTTATaGACTAATAGTTCTTCACGACCCATTTTATCTTCG +
Preference number: 3 (lower is better)
Translates to: PFFSTLFWRVYL*TNSSSRPILSS
Trigger: CGAAGATAAAATGGGTCGTGAAGAACTATTAGTTCATAAGTAGACCCTCCAGAAGAGTGTTGAAAAGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR-3UTR CAA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACAAACTAAAGTCCTCTTaGGCTCAATCAAGTAGCTTC +
Preference number: 3 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYKLKSS*AQSSSF
Trigger: GAAGCTACTTGATTGAGCCAAAGAGGACTTTAGTTT...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR TCA 72 bp CTCTCAAGAGTCCACATACATGTTGGCAGATTTCTTTaGGCTCTACACATTTCATTATATGGATCATCAAAG +
Preference number: 3 (lower is better)
Translates to: LSRVHIHVGRFL*ALHISLYGSSK
Trigger: CTTTGATGATCCATATAATGAAATGTGTAGAGCTCAAAGAAATCTGCCAACATGTATGTGGACTCTTGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CCA 72 bp GGCCATCCTAACAGGACATCCTTTAGAACTCTACCCTaGATCAACAAATTCAACATTAAGGTTAAATTAAAA +
Preference number: 3 (lower is better)
Translates to: GHPNRTSFRTLP*INKFNIKVKLK
Trigger: TTTTAATTTAACCTTAATGTTGAATTTGTTGATCCAGGGTAGAGTTCTAAAGGATGTCCTGTTAGGATGGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGGAACCAGCGTGTTCTTaGGGCCCCCAACCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIREPACS*GPQPSP
Trigger: GGGGCTTGGTTGGGGGCCTCAAGAACACGCTGGTTC...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGAGCAGCATGGAGGAGTaGGCACCTGCACGCACCACG +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRSSMEE*APARTT
Trigger: CGTGGTGCGTGCAGGTGCTCACTCCTCCATGCTGCT...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp ATGACTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCAATGGAAGGAGCCCCGTaGGGCCCGCTCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: MTDESLGKTSTPAAWVFPMEGAP*GPLTQS
Trigger: ACTCTGAGTGAGCGGGCCTCACGGGGCTCCTTCCAT...TGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATACAAGCTGGGCCTGCCTaGTACTCACTCCCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIQAGPA*YSLPRF
Trigger: GAAGCGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTG...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATCCTTCAGCATACACAAGCTGGGCCTaGCTGCTACTCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: SHWERPPHQLLGSSHPSAYTSWA*LLLTPP
Trigger: CGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTGTGTA...TGCTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCCTCGAACCAGCGTGTTCTTaGGGCCCCCAACCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LHITNSIFLGHLSLGILLEPACS*GPQPSP
Trigger: GGGGCTTGGTTGGGGGCCTCAAGAACACGCTGGTTC...GAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATCCTTCAGCAGTTTGCGCACACTTGTaGTGTTTGCCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SHWERPPHQLLGSSHPSAVCAHL*CLPRAL
Trigger: CAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAAC...TGCTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGTAAGATATGGTGGCCTGTGAACAAGCAGGTGACCAAAGTTCTGGGCAAGGATACTCCCCCGCTTCTCTaGACAGACGCCCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SKIWWPVNKQVTKVLGKDTPPLL*TDAPCP
Trigger: AGGGCAGGGGGCGTCTGTGCAGAGAAGCGGGGGAGT...ATCCTTGCCCAGAACTTTGGTCACCTGCTTGTTCACAGGCCACCATATCTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGCCCAGTGTACAGACATaGCTGCGGGTCCATACACAG +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRPSVQT*LRVHTQ
Trigger: CTGTGTATGGACCCGCAGGCATGTCTGTACACTGGG...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCGGAGGAGTGAGCACCTaGACGCACCACGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSGGVST*THHAEQ
Trigger: CTGCTCTGCGTGGTGCGTGCAGGTGCTCACTCCTCC...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATAGGCTCTCTTCCCCAATaGTTGCTGGACTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIGSLPQ*LLDSWV
Trigger: TACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCC...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TCAGCTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCACTCCCCCGCTTCTCTaGACAGACGCCCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SATLLESKGLVSFSIHPITPPLL*TDAPCP
Trigger: AGGGCAGGGGGCGTCTGTGCAGAGAAGCGGGGGAGT...GATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp GGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCAAGCTGGGCCTGCCTaGTACTCACTCCCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GVVVLEPPPSSDMSISATQAGPA*YSLPRF
Trigger: GAAGCGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTG...AGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATACGACTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCTACACAAGCTGGGCCTaGCTGCTACTCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSYTSWA*LLLTPP
Trigger: CGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTGTGTA...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATACCCAGTGTACAGACATaGCTGCGGGTCCATACACAG +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIPSVQT*LRVHTQ
Trigger: CTGTGTATGGACCCGCAGGCATGTCTGTACACTGGG...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATCCTTCAGCACCATCCAGTCGGCATTaGAGACCTCCGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: SHWERPPHQLLGSSHPSAPSSRH*RPPMMS
Trigger: AGACATCATCGGAGGTCTGCAATGCCGACTGGATGG...TGCTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGATGTCTTTGTCCCGCTaGGGTTGGGGGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWMSLSR*GWGSRW
Trigger: CCATCTGCTCCCCCAACCCCAGCGGGACAAAGACAT...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CCTTGGGCACCTCTCTCTTGGTATCCTCCTCCTCCATCAGGATCTTCTGCTGAATTGGTCAGGCCCCACTaGGGACTTTTCATCCACCCA +
Preference number: 4 (lower is better)
Translates to: PWAPLSWYPPPPSGSSAELVRPH*GLFIHP
Trigger: TGGGTGGATGAAAAGTCCCCAGTGGGGCCTGACCAA...TTCAGCAGAAGATCCTGATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR CCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGAGGCGTTTGATAGCTTaGGTTTGGTCAGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRRRLIA*VWSGPT
Trigger: AGTGGGGCCTGACCAAACCCAAGCTATCAAACGCCT...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTAGGGGTGAGGATCGCTTaGGAGACATGGAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PKCCTSPTPSSLGTSLLVGVRIA*ETWKEP
Trigger: GGGCTCCTTCCATGTCTCCCAAGCGATCCTCACCCC...TACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ATGACTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCAAGCAGGGATGGCCCATaGCTGTTCCAGCGATTGCTA +
Preference number: 4 (lower is better)
Translates to: MTDESLGKTSTPAAWVFPSRDGP*LFQRLL
Trigger: TAGCAATCGCTGGAACAGCCATGGGCCATCCCTGCT...TGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR CCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGCCCCCTCAGAGCCCCTaGTTGATGTTAGATCCACCC +
Preference number: 4 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWPPQSP*LMLDPP
Trigger: GGGTGGATCTAACATCAACCAGGGGCTCTGAGGGGG...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATAGTGCCACTCACTCAGTaGTCATCACTTCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIVPLTQ*SSLLGL
Trigger: GAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCAC...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp ATAAACTGGGATCAGTGCCAGCCTTGTCTGCTGCTTTTCAATCCCGACTCTTCCAGATGGTCCCCATCCTaGGTTTCCTCCTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: INWDQCQPCLLLFNPDSSRWSPS*VSSWPS
Trigger: GGAAGGCCAGGAGGAAACTCAGGATGGGGACCATCT...GGAAGAGTCGGGATTGAAAAGCAGCAGACAAGGCTGGCACTGATCCCAGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR TCA 90 bp TTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCCTCTCTTCACTCTGGGGGTaGGGATCGCTTGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: LHITNSIFLGHLSLGILLSSLWG*GSLGRH
Trigger: ATGTCTCCCAAGCGATCCTCACCCCCAGAGTGAAGA...GAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp AGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCGAACCAGCGTGTTCTTaGGGCCCCCAACCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLKAWCLSLYIPSHPFLCEPACS*GPQPSP
Trigger: GGGGCTTGGTTGGGGGCCTCAAGAACACGCTGGTTC...GCACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATATTTCAGGGCGACGCTTaGCACGCCAGTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIFQGDA*HASLSK
Trigger: TTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAA...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGCTCACAGCCCTGAGATaGGTGGTCCTGTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWLTALR*VVLFRT
Trigger: TGTCCTGAACAGGACCACGCATCTCAGGGCTGTGAG...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTAACGCCCCCTGCCCTGTaGCTTCCTGAAAGACACACA +
Preference number: 4 (lower is better)
Translates to: PKCCTSPTPSSLGTSLLVTPPAL*LPERHT
Trigger: TGTGTGTCTTTCAGGAAGCCACAGGGCAGGGGGCGT...TACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCGGCTGGTACACAAGCTaGGCCTGCCTGCTACTCACT +
Preference number: 4 (lower is better)
Translates to: SSHRNVAHHQLHLPWAPLGWYTS*ACLLLT
Trigger: AGTGAGTAGCAGGCAGGCCCAGCTTGTGTACCAGCC...GAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCCTCACTTCTTGGGCTCTGTaGACGTTTCAGGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: LHITNSIFLGHLSLGILLTSWAL*TFQGDA
Trigger: AGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGT...GAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATACTGGGATTGCCAGATTaGAAAGGGGGAGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGILGLPD*KGGGCG
Trigger: TCCACAACCTCCCCCTTTCCAATCTGGCAATCCCAG...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTCTGGTCGGCATCCCCTaGTTTGGAAGACACACGCAG +
Preference number: 4 (lower is better)
Translates to: TEMLHITNSIFLGHLSLGLVGIP*FGRHTQ
Trigger: CTGCGTGTGTCTTCCAAACCAGGGGATGCCGACCAG...ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATCCTTTCCACACTGCAGGCTaGGCACAGCTTGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LMSHWERPPHQLLGSSHPFHTAG*AQLVSK
Trigger: TTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAA...AGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGTTCCACACTGCAGGCTaGGCACAGCTTGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRFHTAG*AQLVSK
Trigger: TTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAA...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGACGGAGAGCGTCCCTTaGGGTAGTAATGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRTESVP*GSNELF
Trigger: AAACAGCTCATTACTACCCCAAGGGACGCTCTCCGT...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCAGTGCCACTCACTCAGTaGTCATCACTTCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NHKPCELGVVVLEPPPSSVPLTQ*SSLLGL
Trigger: GAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCAC...TGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CCTTGGGCACCTCTCTCTTGGTATCCTCCTCCTCCATCAGGATCTTCTGCTGAACAAAAAGCCCATGGATaGAGTAGATCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: PWAPLSWYPPPPSGSSAEQKAHG*SRSPGR
Trigger: CCGACCAGGAGATCTACTTCATCCATGGGCTTTTTG...TTCAGCAGAAGATCCTGATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR TCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACTCTGTCCCACATGCCTaGGTTCTCCTGTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHSVPHA*VLLSGL
Trigger: GAGACCAGACAGGAGAACTCAGGCATGTGGGACAGA...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AAAGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCAAAGACACACAGAAGTaGAGCCGGCGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: KVLTEMLHITNSIFLGHLKDTQK*SRRHQD
Trigger: GTCCTGGTGCCGCCGGCTGCACTTCTGTGTGTCTTT...GAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTAAAGAAAGACACACAGAAGTaGAGCCGGCGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLLPPQICQYQLLCWSLKKDTQK*SRRHQD
Trigger: GTCCTGGTGCCGCCGGCTGCACTTCTGTGTGTCTTT...CTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACGTGTACAGACATGCCTaGGGGTCCATACACAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHVYRHA*GSIHRC
Trigger: GCACCTGTGTATGGACCCGCAGGCATGTCTGTACAC...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGCACTCACAAGACAGGTaGCCACCCAGTGTACAGACA +
Preference number: 4 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWHSQDR*PPSVQT
Trigger: TGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTG...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCCTCCCAGTCTTTCCAAAATaGCTTTCTGGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: LHITNSIFLGHLSLGILLPVFPK*LSGWGT
Trigger: CGTCCCCCAGCCAGAAAGGCATTTTGGAAAGACTGG...GAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCCTCCCAGTCTCAGCCCAGTaGCACTCACTCAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: LHITNSIFLGHLSLGILLPVSAQ*HSLSDH
Trigger: ATGATCACTGAGTGAGTGGCACTGGGCTGAGACTGG...GAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATATCAAACTTTCCACACTaGAGGCTGGGCACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGISNFPH*RLGTAC
Trigger: ACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGA...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGTTCTGGGCAAGGATTaGCAGCCTCAGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LTEMLHITNSIFLGHLSLVLGKD*QPQALF
Trigger: GAAGAGAGCCTGAGGCTGGCAATCCTTGCCCAGAAC...AAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp ACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTGACCTCCACACCAGCTaGTTGGGTCTTCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: TEMLHITNSIFLGHLSLGDLHTS*LGLPIL
Trigger: AAGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTC...ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCCATGCATCCTGCGCCTaGTTCCATGGTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSHASCA*FHGAMD
Trigger: ATCCATGGCACCATGGAAGCAGGCGCAGGATGCATG...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACTCCCTCTGTCCCACATaGCTGAGTTCTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHSLCPT*LSSPVW
Trigger: CCAGACAGGAGAACTCAGGCATGTGGGACAGAGGGA...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCATATATGTCACTGGGCTaGTACACAAGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NHKPCELGVVVLEPPPSSYMSLG*YTSWAC
Trigger: GCAGGCCCAGCTTGTGTACCAGCCCAGTGACATATA...TGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTACTTCTTGGGCTCTGTaGACGTTTCAGGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: TEMLHITNSIFLGHLSLGTSWAL*TFQGDA
Trigger: AGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGT...ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTTTGGTCAGGCCCCACTaGGGACTTTTCATCCACCCA +
Preference number: 4 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSLVRPH*GLFIHP
Trigger: TGGGTGGATGAAAAGTCCCCAGTGGGGCCTGACCAA...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTTTGATAGCTTGGGTTTaGTCAGGCCCCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSLIAWV*SGPTGD
Trigger: GTCCCCAGTGGGGCCTGACCAAACCCAAGCTATCAA...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAACTGGTCGGCATCCCCTaGTTTGGAAGACACACGCAG +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQLVGIP*FGRHTQ
Trigger: CTGCGTGTGTCTTCCAAACCAGGGGATGCCGACCAG...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp ACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCGTTTGCCCAGGGCGCTaGAATCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLLESKGLVSFSIHPIPPVCPGR*NLLSWP
Trigger: TGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAAC...GGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTAAGATATGGTGGCCTGTGAACAAGCAGGTGACCAAAGTTCTGGGCAAGGATGTTTGCGCACACTTGTaGTGTTTGCCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SKIWWPVNKQVTKVLGKDVCAHL*CLPRAL
Trigger: CAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAAC...ATCCTTGCCCAGAACTTTGGTCACCTGCTTGTTCACAGGCCACCATATCTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACGTTTGCGCACACTTGTaGTGTTTGCCCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDVCAHL*CLPRAL
Trigger: CAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAAC...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp ATGACTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCACCCGCTCACTCAGAGTaGTCTCCAAGAAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: MTDESLGKTSTPAAWVFPPAHSE*SPRRGL
Trigger: TAATCCTCTTCTTGGAGACCACTCTGAGTGAGCGGG...TGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp GCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGATCGCTTGGGAGACATaGAAGGAGCCCCGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ARETLCKDFIQNHKPCELIAWET*KEPREA
Trigger: GGCCTCACGGGGCTCCTTCCATGTCTCCCAAGCGAT...CAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp GAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGATCGCTTGGGAGACATaGAAGGAGCCCCGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ESKGLVSFSIHPIPPFLVIAWET*KEPREA
Trigger: GGCCTCACGGGGCTCCTTCCATGTCTCCCAAGCGAT...CACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTGGGGTGAGGATCGCTTaGGAGACATGGAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFGVRIA*ETWKEP
Trigger: GGGCTCCTTCCATGTCTCCCAAGCGATCCTCACCCC...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAAACCACCATAAGCCACTaGGGAGGTCCTGACCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKTTISH*GGPDLG
Trigger: ACCAAGGTCAGGACCTCCCCAGTGGCTTATGGTGGT...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAAATCCACCCCAGATGGTaGTCCACAGCTGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKIHPRW*STAAMS
Trigger: GCTCATTGCAGCTGTGGACCACCATCTGGGGTGGAT...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGGCTTCCATGGTGCCATaGATAAGGGGCCTTCCACTT +
Preference number: 4 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWASMVP*IRGLPL
Trigger: AAGTGGAAGGCCCCTTATCCATGGCACCATGGAAGC...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TCAGCTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCAGATGGTCCCCATCCTaGGTTTCCTCCTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SATLLESKGLVSFSIHPIRWSPS*VSSWPS
Trigger: GGAAGGCCAGGAGGAAACTCAGGATGGGGACCATCT...GATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTGCCCATCCCAGACCTTaGTGCCAAAAAGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: YWSLLPPQICQYQLLCWSAHPRP*CQKAHG
Trigger: TCCATGGGCTTTTTGGCATCAAGGTCTGGGATGGGC...ACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAATGGAAGGAGCCCCGTaGGGCCCGCTCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAMEGAP*GPLTQS
Trigger: ACTCTGAGTGAGCGGGCCTCACGGGGCTCCTTCCAT...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAACCAGTCTCAGCCCAGTaGCACTCACTCAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKPVSAQ*HSLSDH
Trigger: ATGATCACTGAGTGAGTGGCACTGGGCTGAGACTGG...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp ACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTCTTATGTTCCCCTCTaGAGATGGGGGAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: TLLESKGLVSFSIHPIPPSYVPL*RWGKVG
Trigger: GCCTACCTTCCCCCATCTCCAGAGGGGAACATAAGA...GGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCAAATGCCTTTCTGGCTaGGGGACGGGGCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: IGASSLLRYVNISYSAGVKCLSG*GTGQTD
Trigger: ATCTGTTTGCCCCGTCCCCCAGCCAGAAAGGCATTT...GACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACTTGGTCAGGCCCCACTaGGGACTTTTCATCCACCCA +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDLVRPH*GLFIHP
Trigger: TGGGTGGATGAAAAGTCCCCAGTGGGGCCTGACCAA...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp GTAGTCGTATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCGGCATCCCCTGGTTTaGAAGACACACGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VVVLEPPPSSDMSISATLRHPLV*KTHAGQ
Trigger: TTGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCG...CAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATACGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTCTGGTCGGCATCCCCTaGTTTGGAAGACACACGCAG +
Preference number: 4 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPLVGIP*FGRHTQ
Trigger: CTGCGTGTGTCTTCCAAACCAGGGGATGCCGACCAG...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTTTTCCAAAGGCCTCCTaGATCCGCAGAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TEMLHITNSIFLGHLSLGFPKAS*IRRTRH
Trigger: ATGCCTGGTTCTGCGGATCCAGGAGGCCTTTGGAAA...ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTAAGATATGGTGGCCTGTGAACAAGCAGGTGACCAAAGTTCTGGGCAAGGATGTTTGCCCAGGGCGCTaGAATCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SKIWWPVNKQVTKVLGKDVCPGR*NLLSWP
Trigger: TGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAAC...ATCCTTGCCCAGAACTTTGGTCACCTGCTTGTTCACAGGCCACCATATCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTTCCACACCAGCTGCTTaGGTCTTCCCATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: YWSLLPPQICQYQLLCWSSTPAA*VFPSFS
Trigger: GCTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGA...ACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACACAGTCAGCAGCCCTTaGGTGTTACTGGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHTVSSP*VLLASC
Trigger: ACAGGATGCCAGTAACACCCAAGGGCTGCTGACTGT...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp TCACCGAAATGTTGCACATCACCAACTCCATCTTCCTaGGGCACCTCTCTCTTGGTATCCTCCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SPKCCTSPTPSS*GTSLLVSSSSI
Trigger: GATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477665.2
3UTR CAA 72 bp CTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATaGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LQIHLELPPLMP*QFPMHPAPASM
Trigger: CATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp CTCCTATCTCCCAGAACTCTTGTGCAGACTTTCAAATaGCAAGCAAGGCTGGCAGCTCCAAGCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LLSPRTLVQTFK*QARLAAPSSME
Trigger: CTCCATGCTGCTTGGAGCTGCCAGCCTTGCTTGCAATTTGAAAGTCTGCACAAGAGTTCTGGGAGATAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCCATCCACCCAGTAGCTaGATGAATCATGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSHPPSS*MNHVSL
Trigger: CAGGCTCACATGATTCATTCAGCTACTGGGTGGATG...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCACGAAATGTCAGGTTCTaGGTCACAGACCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: NHKPCELGVVVLEPPPSSRNVRF*VTDHFF
Trigger: GAAGAAGTGGTCTGTGACTCAGAACCTGACATTTCG...TGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp GAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGGGCTCTCTTCCCCAATaGTTGCTGGACTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: ESKGLVSFSIHPIPPFLVGSLPQ*LLDSWV
Trigger: TACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCC...CACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATAGCAGGCTTTGATTTCTaGATGACTGATGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIAGFDF*MTDESL
Trigger: CAGTGACTCATCAGTCATTCAGAAATCAAAGCCTGC...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCTTCCAAGATCAGGCTTaGAGACCCCACTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSFQDQA*RPHSKE
Trigger: CTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAA...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACAATCACTCACAGCCCTaGGATGCGTGGTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDNHSQP*DAWSCS
Trigger: TGAACAGGACCACGCATCTCAGGGCTGTGAGTGATT...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAAATGCCTCTAGACTGTTaGTGGGCTTGCCTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQMPLDC*WACLGK
Trigger: TTTGCCGAGGCAAGCCCATCAACAGTCTAGAGGCAT...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGTACCAAAGGCCTATTTaGCTTTTCAAAGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRYQRPI*LFKVLC
Trigger: GCACAGCACTTTGAAAAGTCAAATAGGCCTTTGGTA...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTGTGTACAGACATGCCTaGGGGTCCATACACAGGTGC +
Preference number: 4 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPVYRHA*GSIHRC
Trigger: GCACCTGTGTATGGACCCGCAGGCATGTCTGTACAC...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCCAGTCTCAGCCCAGTaGCACTCACTCAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: LLESKGLVSFSIHPIPPFPVSAQ*HSLSDH
Trigger: ATGATCACTGAGTGAGTGGCACTGGGCTGAGACTGG...AAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAATCAAACTTTCCACACTaGAGGCTGGGCACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKSNFPH*RLGTAC
Trigger: ACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGA...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAACACACTTGTGGTGTTTaGCCAGGGCGCTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQHTCGV*PGRWNL
Trigger: AAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTG...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGGGCATGCAGCAAACATaGATATCTATCTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRGMQQT*ISISCW
Trigger: CCAACAAGAGATAGATATGCATGTTTGCTGCATGCC...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CAGCTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCTATATGTCACTGGGCTaGTACACAAGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QLLCWSLKAWCLSLYIPSYMSLG*YTSWAC
Trigger: GCAGGCCCAGCTTGTGTACCAGCCCAGTGACATATA...GGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTCTGTTGTTAACAAACTaGCCAGTCTCAGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TEMLHITNSIFLGHLSLGLLLTN*PVSAQC
Trigger: GCACTGGGCTGAGACTGGCCAGTTTGTTAACAACAG...ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTCTGTTGTTAACAAACTaGCCAGTCTCAGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LEPPPSSDMSISATLLESLLLTN*PVSAQC
Trigger: GCACTGGGCTGAGACTGGCCAGTTTGTTAACAACAG...AGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTAAGATATGGTGGCCTGTGAACAAGCAGGTGACCAAAGTTCTGGGCAAGGATCTGGGATTGCCAGATTaGAAAGGGGGAGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SKIWWPVNKQVTKVLGKDLGLPD*KGGGCG
Trigger: TCCACAACCTCCCCCTTTCCAATCTGGCAATCCCAG...ATCCTTGCCCAGAACTTTGGTCACCTGCTTGTTCACAGGCCACCATATCTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTAGGCGTTTGATAGCTTaGGTTTGGTCAGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LLESKGLVSFSIHPIPPFRRLIA*VWSGPT
Trigger: AGTGGGGCCTGACCAAACCCAAGCTATCAAACGCCT...AAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATAAGGAAGATAATCTCCTaGGGGTGCTGTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIRKIIS*GCCVRN
Trigger: GTTTCTTACACAGCACCCCCAGGAGATTATCTTCCT...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTTGGGCACCTCTCTCTTaGTATCCTCCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: YWSLLPPQICQYQLLCWSWAPLS*YPPPPS
Trigger: TGATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCA...ACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAAAATCCTAGAGAGACCTaGTGCTTGGCTCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKNPRET*CLALFP
Trigger: GGGGAAAAGAGCCAAGCACCAGGTCTCTCTAGGATT...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCTGCAGGTGCTCTACCTaGCAGCCATTCTGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSCRCST*QPFWKK
Trigger: CTTTTTCCAGAATGGCTGCCAGGTAGAGCACCTGCA...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAATGGCTGTGTGGGAAATaGTCCAGGGAGCTCATGAAT +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKWLCGK*SRELMN
Trigger: ATTCATGAGCTCCCTGGACCATTTCCCACACAGCCA...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACTCTCAAAACGAGAGATaGAAAGTCCCGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHSQNER*KVPPRH
Trigger: ATGGCGTGGCGGGACTTTCCATCTCTCGTTTTGAGA...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp ACGGGAAGGAATGACACAGAATATGCCTCTAGACTGTaGATGGGCTTGCCTCGGCAAATGGTGAGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TGRNDTEYASRL*MGLPRQMVSLN
Trigger: ATTCAGGCTCACCATTTGCCGAGGCAAGCCCATCAACAGTCTAGAGGCATATTCTGTGTCATTCCTTCCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTTGCCCTGTGGCTTCCTaGAAGACACACAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LSARETLCKDFIQNHKPCCPVAS*KTHRSA
Trigger: TGCACTTCTGTGTGTCTTTCAGGAAGCCACAGGGCA...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CAGCTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCATCCACCCAGTAGCTaGATGAATCATGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QLLCWSLKAWCLSLYIPSHPPSS*MNHVSL
Trigger: CAGGCTCACATGATTCATTCAGCTACTGGGTGGATG...GGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp ACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCCGAAATGTCAGGTTCTaGGTCACAGACCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLLESKGLVSFSIHPIPPRNVRF*VTDHFF
Trigger: GAAGAAGTGGTCTGTGACTCAGAACCTGACATTTCG...GGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCCGAAATGTCAGGTTCTaGGTCACAGACCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSRNVRF*VTDHFF
Trigger: GAAGAAGTGGTCTGTGACTCAGAACCTGACATTTCG...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCAAAAAGCCCATGGATaGAGTAGATCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: NVAHHQLHLPWAPLSWYPQKAHG*SRSPGR
Trigger: CCGACCAGGAGATCTACTTCATCCATGGGCTTTTTG...AGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TATTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACATGGAAGGAGCCCCGTaGGGCCCGCTCACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: YLFCLSARETLCKDFIQNMEGAP*GPLTQS
Trigger: ACTCTGAGTGAGCGGGCCTCACGGGGCTCCTTCCAT...GTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp GCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGATCAGTGCCAGCCTATaGACCAGCGTGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ARETLCKDFIQNHKPCELISASL*TSVFLR
Trigger: CCTCAAGAACACGCTGGTTCATAGGCTGGCACTGAT...CAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393934.7
CDS-3UTR TCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGCCACTGGGGAGGTCCTaGCCTTGGTCACATGAAGCG +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRPLGRS*PWSHEA
Trigger: CGCTTCATGTGACCAAGGTCAGGACCTCCCCAGTGG...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTGGTCCACAGCTGCAATaGGCCAGTCTTTTTCACCAG +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFGPQLQ*ASLFHQ
Trigger: CTGGTGAAAAAGACTGGCTCATTGCAGCTGTGGACC...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACGGCAATGGTTGTAAGTaGCAACGCTATGGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHGNGCK*QRYGAK
Trigger: TTTGGCACCATAGCGTTGTCACTTACAACCATTGCC...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCAGGCTTCCACTCCCTTAATCTaGTCAGTCCCAGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: KGLVSFSIHPIPPFLVQASTPLI*SVPAPL
Trigger: TAACGGAGCTGGGACTGAGCAGATTAAGGGAGTGGA...AGCCTGCACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACTCCACTCCCTTAATCTaGTCAGTCCCAGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDSTPLI*SVPAPL
Trigger: TAACGGAGCTGGGACTGAGCAGATTAAGGGAGTGGA...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp GAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCCAGTCTTTCCAAAATaGCTTTCTGGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: ESKGLVSFSIHPIPPFLVPVFPK*LSGWGT
Trigger: CGTCCCCCAGCCAGAAAGGCATTTTGGAAAGACTGG...CACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTTTTCAGGGCGACGCTTaGCACGCCAGTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSARETLCKDFIQNHKPCFQGDA*HASLSK
Trigger: TTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAA...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATATGCTTGAAAATGCCAGCTTCAAACTTTCCACACTaGAGGCTGGGCACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSSPMIAGLLGICLKMPASNFPH*RLGTAC
Trigger: ACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGA...AGCTGGCATTTTCAAGCATATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTCACACTTGTGGTGTTTaGCCAGGGCGCTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LSARETLCKDFIQNHKPCHTCGV*PGRWNL
Trigger: AAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTG...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTCACACTTGTGGTGTTTaGCCAGGGCGCTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPHTCGV*PGRWNL
Trigger: AAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTG...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTCTTCCCCAATGATTaGTGGACTCCTGGGTATATG +
Preference number: 4 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSLFPND*WTPGYM
Trigger: CATATACCCAGGAGTCCAGCAATCATTGGGGAAGAG...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAGTTTCCCATGCATCCTaGGCCTGCTTCCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAVSHAS*ACFHGA
Trigger: GGCACCATGGAAGCAGGCGCAGGATGCATGGGAAAC...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGACGCCCCCTGCCCTGTaGCTTCCTGAAAGACACACA +
Preference number: 4 (lower is better)
Translates to: KDFIQNHKPCELGVVVLETPPAL*LPERHT
Trigger: TGTGTGTCTTTCAGGAAGCCACAGGGCAGGGGGCGT...CTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTTATATGTCACTGGGCTaGTACACAAGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFYMSLG*YTSWAC
Trigger: GCAGGCCCAGCTTGTGTACCAGCCCAGTGACATATA...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp GAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGTCTTATGTTCCCCTCTaGAGATGGGGGAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: ESKGLVSFSIHPIPPFLVSYVPL*RWGKVG
Trigger: GCCTACCTTCCCCCATCTCCAGAGGGGAACATAAGA...CACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCGTGATCATCACTTCTTaGGCTCTGTGGACGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TLLESKGLVSFSIHPIPPVIITS*ALWTFQ
Trigger: CTGAAACGTCCACAGAGCCCAAGAAGTGATGATCAC...GGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGATGTCTTTGTCCCGCTaGGGTTGGGGGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KDFIQNHKPCELGVVVLEMSLSR*GWGSRW
Trigger: CCATCTGCTCCCCCAACCCCAGCGGGACAAAGACAT...CTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTCTGGGATTGCCAGATTaGAAAGGGGGAGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFLGLPD*KGGGCG
Trigger: TCCACAACCTCCCCCTTTCCAATCTGGCAATCCCAG...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTAGGCGTTTGATAGCTTaGGTTTGGTCAGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LSARETLCKDFIQNHKPCRRLIA*VWSGPT
Trigger: AGTGGGGCCTGACCAAACCCAAGCTATCAAACGCCT...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAACCCGCTCACTCAGAGTaGTCTCCAAGAAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQPAHSE*SPRRGL
Trigger: TAATCCTCTTCTTGGAGACCACTCTGAGTGAGCGGG...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTATCGCTTGGGAGACATaGAAGGAGCCCCGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPIAWET*KEPREA
Trigger: GGCCTCACGGGGCTCCTTCCATGTCTCCCAAGCGAT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTTGGGCACCTCTCTCTTaGTATCCTCCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: LSARETLCKDFIQNHKPCWAPLS*YPPPPS
Trigger: TGATGGAGGAGGAGGATACCAAGAGAGAGGTGCCCA...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCCTCTATCAGCTACTCTGCTaGAGTCTAAAGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LHITNSIFLGHLSLGILLYQLLC*SLKAWC
Trigger: ACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATA...GAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGTGTCCCCAGGAGGACTaGGGGAGCCAGGACATGAAC +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRCPQED*GSQDMN
Trigger: GTTCATGTCCTGGCTCCCCCAGTCCTCCTGGGGACA...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAACAGCTCCAAGCAGCATaGAGGAGTGAGCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEEQLQAA*RSEHLH
Trigger: GTGCAGGTGCTCACTCCTCCATGCTGCTTGGAGCTG...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAATGTGGTGTATTCTTCTaGGTTAGGGCCTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKCGVFF*VRACLG
Trigger: CCCTAAACAGGCCCTAACCCAGAAGAATACACCACA...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp TGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATaGGGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CKDFIQNHKPCE*GVVVLEPPPSS
Trigger: TGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp AGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGATGCCCTGTGGCTTCCTaGAAGACACACAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RETLCKDFIQNHKPCELGCPVAS*KTHRSA
Trigger: TGCACTTCTGTGTGTCTTTCAGGAAGCCACAGGGCA...TCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTGCGCCGGCTCTAGCCTaGTTTATGTTTCTATATATG +
Preference number: 4 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSAPALA*FMFLYM
Trigger: CATATATAGAAACATAAATCAGGCTAGAGCCGGCGC...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp AAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGATTGCAGACCTCCGATaGTGTCTTTGTCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KDFIQNHKPCELGVVVLEIADLR*CLCPAG
Trigger: CCCAGCGGGACAAAGACATCATCGGAGGTCTGCAAT...CTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTAATTGCAGACCTCCGATaGTGTCTTTGTCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCKDFIQNHKPCELGVVVIADLR*CLCPAG
Trigger: CCCAGCGGGACAAAGACATCATCGGAGGTCTGCAAT...TACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp GCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGCATCCACCCAGTAGCTaGATGAATCATGTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ARETLCKDFIQNHKPCELHPPSS*MNHVSL
Trigger: CAGGCTCACATGATTCATTCAGCTACTGGGTGGATG...CAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTAGCCCATCCCAGACCTTaGTGCCAAAAAGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LCKDFIQNHKPCELGVVVAHPRP*CQKAHG
Trigger: TCCATGGGCTTTTTGGCATCAAGGTCTGGGATGGGC...TACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAGCCCATCCCAGACCTTaGTGCCAAAAAGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEEAHPRP*CQKAHG
Trigger: TCCATGGGCTTTTTGGCATCAAGGTCTGGGATGGGC...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp ACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTGAACCACAAACCCTGTaGATTGGGAGTAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: TEMLHITNSIFLGHLSLGEPQTL*IGSSRI
Trigger: AATACGACTACTCCCAATTCACAGGGTTTGTGGTTC...ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGGGGGGAGCCAGGACATaGACAGCAGAGTCAGGAATC +
Preference number: 4 (lower is better)
Translates to: PYDWGANQPRFANQSALKGGART*TAESGI
Trigger: GATTCCTGACTCTGCTGTTCATGTCCTGGCTCCCCC...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACATTCTCAGATGGTGCTaGGGAGCAACAAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDILRWC*GATKCT
Trigger: TGTGCACTTTGTTGCTCCTCAGCACCATCTGAGAAT...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAAGAGGCATTTCTATTATaGCCTCCTCAAGGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQEAFLL*PPQGCK
Trigger: CTTGCACCCTTGAGGAGGTCATAATAGAAATGCCTC...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAATGTATTGGACATCACTaGACACACGTGCCTATCACT +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKCIGHH*THVPIT
Trigger: AGTGATAGGCACGTGTGTTCAGTGATGTCCAATACA...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACCAAGCTGGGCCTGCCTaGTACTCACTCCCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYQAGPA*YSLPRF
Trigger: GAAGCGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTG...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTATAATCTCCTGGGGGTaGTGTGTAAGAAACGAGTCA +
Preference number: 4 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSIISWG*CVRNES
Trigger: TGACTCGTTTCTTACACAGCACCCCCAGGAGATTAT...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAAATAATCTCCTGGGGGTaGTGTGTAAGAAACGAGTCA +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKIISWG*CVRNES
Trigger: TGACTCGTTTCTTACACAGCACCCCCAGGAGATTAT...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGAGAAGAGGATTAGTTTaGGCACACTTGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWRRGLV*AHLWCL
Trigger: CAAACACCACAAGTGTGCGCAAACTAATCCTCTTCT...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp ATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCGGACTCCTGGGTATATaGTTGAAAATGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IGASSLLRYVNISYSAGVGLLGI*LKMPAH
Trigger: ATGAGCTGGCATTTTCAAGCATATACCCAGGAGTCC...GACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTAGTGCCAGCCTTGTCTaGTGCTTTTCAATCCCGACT +
Preference number: 4 (lower is better)
Translates to: LSARETLCKDFIQNHKPCSASLV*CFSIPT
Trigger: AGTCGGGATTGAAAAGCAGCAGACAAGGCTGGCACT...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR GCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCCTCCAAAGAGGACTTTaGCAAAATGATGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSLQRGL*QNDAGA
Trigger: AGCACCTGCATCATTTTGGCAAAGTCCTCTTTGGAG...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGCCATGTTCTATGCTATaGAAAAGAAACTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRPCSML*KRNFLS
Trigger: TGACAGGAAGTTTCTTTTGCATAGCATAGAACATGG...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAGTGACAACGCTATGGTaGCAAACACCAGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAVTTLW*QTPGSS
Trigger: GCTGCTCCCTGGTGTTTGGCACCATAGCGTTGTCAC...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTACGCCCCCTGCCCTGTaGCTTCCTGAAAGACACACA +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPTPPAL*LPERHT
Trigger: TGTGTGTCTTTCAGGAAGCCACAGGGCAGGGGGCGT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp ACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCAAATGCCTTTCTGGCTaGGGGACGGGGCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: TLCKDFIQNHKPCELGVVKCLSG*GTGQTD
Trigger: ATCTGTTTGCCCCGTCCCCCAGCCAGAAAGGCATTT...GACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTAAAGGTGATCATCACTTCTTaGGCTCTGTGGACGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SLLPPQICQYQLLCWSLKVIITS*ALWTFQ
Trigger: CTGAAACGTCCACAGAGCCCAAGAAGTGATGATCAC...CTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp ACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTAGGAAGATAATCTCCTaGGGGTGCTGTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: TEMLHITNSIFLGHLSLGRKIIS*GCCVRN
Trigger: GTTTCTTACACAGCACCCCCAGGAGATTATCTTCCT...ACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TATTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACGGGGTGAGGATCGCTTaGGAGACATGGAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: YLFCLSARETLCKDFIQNGVRIA*ETWKEP
Trigger: GGGCTCCTTCCATGTCTCCCAAGCGATCCTCACCCC...GTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAGAGAGACCTGGTGCTTaGCTCTTTTCCCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAERPGA*LFSPSE
Trigger: CTCTGAGGGGGAAAAGAGCCAAGCACCAGGTCTCTC...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGCAAGGAGTTATAGAATaGCTCCAAATCCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWQGVIE*LQIHLE
Trigger: CTCCAAGTGGATTTGGAGCCATTCTATAACTCCTTG...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAATGGAAGACCAAGAGTTaGGGGTGTGGATGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQWKTKS*GCGCAF
Trigger: AAAAGCACATCCACACCCCCAACTCTTGGTCTTCCA...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTACAGAACGTATAGGGTaGAAGACCAAGAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFTERIG*KTKSWG
Trigger: CCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGT...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACACTTGTCAACACACCTaGCCTCATAGCACCAAACAC +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDTCQHT*PHSTKH
Trigger: GTGTTTGGTGCTATGAGGCCAGGTGTGTTGACAAGT...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAACCTACATCACACTGTTaGGAAATAAGCCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQPTSHC*EISPSS
Trigger: GCTGCTTGGGCTTATTTCCCAACAGTGTGATGTAGG...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAACTGTTTAGCATGTACTaGGAAAGCCCACCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQLFSMY*ESPPLK
Trigger: CTTGAGAGGTGGGCTTTCCCAGTACATGCTAAACAG...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAATGCCCTGTGGCTTCCTaGAAGACACACAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEECPVAS*KTHRSA
Trigger: TGCACTTCTGTGTGTCTTTCAGGAAGCCACAGGGCA...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGATTGCAGACCTCCGATaGTGTCTTTGTCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRIADLR*CLCPAG
Trigger: CCCAGCGGGACAAAGACATCATCGGAGGTCTGCAAT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCATCTTCACTCTGGGGGTaGGGATCGCTTGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: FILFECQGNPLQRFHPEPSSLWG*GSLGRH
Trigger: ATGTCTCCCAAGCGATCCTCACCCCCAGAGTGAAGA...TGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATATGCTTGAAAATGCCAGCTGCAGGCTTTGATTTCTaGATGACTGATGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LSSPMIAGLLGICLKMPAAGFDF*MTDESL
Trigger: CAGTGACTCATCAGTCATTCAGAAATCAAAGCCTGC...AGCTGGCATTTTCAAGCATATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACGAACCACAAACCCTGTaGATTGGGAGTAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: LLCWSLKAWCLSLYIPSHEPQTL*IGSSRI
Trigger: AATACGACTACTCCCAATTCACAGGGTTTGTGGTTC...GTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTCCTATTTATTCTGTTTaGGTGCCAGGGAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: LEPPPSSDMSISATLLESPIYSV*VPGKPF
Trigger: AAAGGGTTTCCCTGGCACTCAAACAGAATAAATAGG...AGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACGTATTTCTCACTTGGTaGCACACGAGTCATCCTAAA +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHVFLTW*HTSHPK
Trigger: TTTAGGATGACTCGTGTGTCACCAAGTGAGAAATAC...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCAGGCAGAGATTCTGCTaGTGCAAAGGTGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSRQRFC*CKGVYQ
Trigger: TTGATAAACACCTTTGCATCAGCAGAATCTCTGCCT...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGTGTACAGACATGCCTaGGGGTCCATACACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSVYRHA*GSIHRC
Trigger: GCACCTGTGTATGGACCCGCAGGCATGTCTGTACAC...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTCCCAGTGTACAGACATaGCTGCGGGTCCATACACAG +
Preference number: 4 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSPSVQT*LRVHTQ
Trigger: CTGTGTATGGACCCGCAGGCATGTCTGTACACTGGG...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTACACTCACAAGACAGGTaGCCACCCAGTGTACAGACA +
Preference number: 4 (lower is better)
Translates to: LCKDFIQNHKPCELGVVVHSQDR*PPSVQT
Trigger: TGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTG...TACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp ACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCTCCACTCCCTTAATCTaGTCAGTCCCAGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: TLCKDFIQNHKPCELGVVSTPLI*SVPAPL
Trigger: TAACGGAGCTGGGACTGAGCAGATTAAGGGAGTGGA...GACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp ATAAACTGGGATCAGTGCCAGCCTTGTCTGCTGCTTTTCAATCCCGACTCTTCCAGAAGAGGATTAGTTTaGGCACACTTGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: INWDQCQPCLLLFNPDSSRRGLV*AHLWCL
Trigger: CAAACACCACAAGTGTGCGCAAACTAATCCTCTTCT...GGAAGAGTCGGGATTGAAAAGCAGCAGACAAGGCTGGCACTGATCCCAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR GCA 90 bp ACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTCTCACCGAAATGTTaGACATCACCAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: TLLESKGLVSFSIHPIPPFSPKC*TSPTPS
Trigger: AGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAA...GGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTCTCTTCCCCAATGATTaGTGGACTCCTGGGTATATG +
Preference number: 4 (lower is better)
Translates to: LSARETLCKDFIQNHKPCLFPND*WTPGYM
Trigger: CATATACCCAGGAGTCCAGCAATCATTGGGGAAGAG...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGCCTAGAGAGACCTGGTaGTTGGCTCTTTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRPRETW*LALFPL
Trigger: GAGGGGGAAAAGAGCCAAGCACCAGGTCTCTCTAGG...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCACATTGCAGTTTCCCATaGATCCTGCGCCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAHCSFP*ILRLLP
Trigger: TGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATG...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAGGCTGGTACACAAGCTaGGCCTGCCTGCTACTCACT +
Preference number: 4 (lower is better)
Translates to: HPSASGLNKTSAYDFSEVGWYTS*ACLLLT
Trigger: AGTGAGTAGCAGGCAGGCCCAGCTTGTGTACCAGCC...TACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTCTAAAGTTCTATATATGTCACTaGGCTGGTACACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLLPPQICQYQLLCWSLKFYICH*AGTQAG
Trigger: CCCAGCTTGTGTACCAGCCCAGTGACATATATAGAA...CTTTAGACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp GTAGTCGTATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGTTCTATATATGTCACTaGGCTGGTACACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVVLEPPPSSDMSISATLFYICH*AGTQAG
Trigger: CCCAGCTTGTGTACCAGCCCAGTGACATATATAGAA...CAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATACGACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAAAATGCCTTTCTGGCTaGGGGACGGGGCAAACAGAT +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAKCLSG*GTGQTD
Trigger: ATCTGTTTGCCCCGTCCCCCAGCCAGAAAGGCATTT...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAATGTCTTTGTCCCGCTaGGGTTGGGGGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: HPSASGLNKTSAYDFSEVMSLSR*GWGSRW
Trigger: CCATCTGCTCCCCCAACCCCAGCGGGACAAAGACAT...TACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTTGATAGCTTGGGTTTaGTCAGGCCCCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPLIAWV*SGPTGD
Trigger: GTCCCCAGTGGGGCCTGACCAAACCCAAGCTATCAA...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTCGGCATCCCCTGGTTTaGAAGACACACGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSRHPLV*KTHAGQ
Trigger: TTGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCG...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCGGCATCCCCTGGTTTaGAAGACACACGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPRHPLV*KTHAGQ
Trigger: TTGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACAGGAAGATAATCTCCTaGGGGTGCTGTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDRKIIS*GCCVRN
Trigger: GTTTCTTACACAGCACCCCCAGGAGATTATCTTCCT...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AAAGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTTCCCCAATGATTGCTaGACTCCTGGGTATATGCTT +
Preference number: 4 (lower is better)
Translates to: KVLTEMLHITNSIFLGHLFPNDC*TPGYML
Trigger: AAGCATATACCCAGGAGTCCAGCAATCATTGGGGAA...GAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACTATCAGCTACTCTGCTaGAGTCTAAAGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LLCWSLKAWCLSLYIPSHYQLLC*SLKAWC
Trigger: ACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGATA...GTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACCATGTAAACATTTCATaGAACAGTCAGCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHHVNIS*NSQQPL
Trigger: CAAGGGCTGCTGACTGTTCCATGAAATGTTTACATG...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp CAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATaGGAGCCTCCTCCCTCCTCAGATATGTCAATATCA +
Preference number: 4 (lower is better)
Translates to: QNHKPCELGVVV*EPPPSSDMSIS
Trigger: TGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTAAATCTTACATAAACTaGAAGTCCGAGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLESKGLVSFSIHPIPPFKSYIN*KSEEQP
Trigger: TGGCTGCTCCTCGGACTTTCAGTTTATGTAAGATTT...AAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTGTGCCACTCACTCAGTaGTCATCACTTCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPVPLTQ*SSLLGL
Trigger: GAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCAC...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AAAGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCCCTATTTATTCTGTTTaGGTGCCAGGGAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: KVLTEMLHITNSIFLGHLPIYSV*VPGKPF
Trigger: AAAGGGTTTCCCTGGCACTCAAACAGAATAAATAGG...GAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACTACCAGTATACGCTATaGAAGAACAGCTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHYQYTL*KNSLCL
Trigger: CAAACACAAGCTGTTCTTTCATAGCGTATACTGGTA...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTAGGCCCTACAGAATTTaGCATTATCCCAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFRPYRI*HYPRKP
Trigger: GGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCT...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAAAAGACACACAGAAGTaGAGCCGGCGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKKDTQK*SRRHQD
Trigger: GTCCTGGTGCCGCCGGCTGCACTTCTGTGTGTCTTT...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TTTATAAGCCTATTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTTACACAAGCTGGGCCTaGCTGCTACTCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: FISLFILFECQGNPLQRFYTSWA*LLLTPP
Trigger: CGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTGTGTA...AAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAATAGGCTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACACTCACAAGACAGGTaGCCACCCAGTGTACAGACA +
Preference number: 4 (lower is better)
Translates to: FILFECQGNPLQRFHPEPHSQDR*PPSVQT
Trigger: TGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTG...TGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGCCATCCAGTCGGCATTaGAGACCTCCGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: PYDWGANQPRFANQSALKPSSRH*RPPMMS
Trigger: AGACATCATCGGAGGTCTGCAATGCCGACTGGATGG...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp GAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGATAATCTCCTGGGGGTaGTGTGTAAGAAACGAGTCA +
Preference number: 4 (lower is better)
Translates to: ESKGLVSFSIHPIPPFLVIISWG*CVRNES
Trigger: TGACTCGTTTCTTACACAGCACCCCCAGGAGATTAT...CACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATATGGTGGCGTTCTGGGCAAGGATTaGCAGCCTCAGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SGLNKTSAYDFSEVRYGGVLGKD*QPQALF
Trigger: GAAGAGAGCCTGAGGCTGGCAATCCTTGCCCAGAAC...GCCACCATATCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATTTATTCTGTTTGAGTaGCAGGGAAACCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PKCCTSPTPSSLGTSLLVFILFE*QGNPLQ
Trigger: TTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAA...TACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTTTTATTCTGTTTGAGTaGCAGGGAAACCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSFILFE*QGNPLQ
Trigger: TTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAA...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTTGGTCACATGAAGCGTaGTTTCTTCCCTTGGACTTA +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFWSHEA*FLPLDL
Trigger: TAAGTCCAAGGGAAGAAAGCACGCTTCATGTGACCA...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACTCTCTGCAAGCAACATaGAAAATCCATCTATGGGCA +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDSLQAT*KIHLWA
Trigger: TGCCCATAGATGGATTTTGCATGTTGCTTGCAGAGA...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTCAGAGCAGGACTCCGTaGATGCAACCTTGGTACAGT +
Preference number: 4 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLQSRTP*MQPWYS
Trigger: ACTGTACCAAGGTTGCATGCACGGAGTCCTGCTCTG...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCTTCCTAGATAAGTTCTaGCATCCTACATCACACTGT +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSFLDKF*HPTSHC
Trigger: ACAGTGTGATGTAGGATGGCAGAACTTATCTAGGAA...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCCTTTTCAAAGTGCTGTaGTTCTTGTTGGGCTTAATG +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSLFKVL*FLLGLM
Trigger: CATTAAGCCCAACAAGAAGCACAGCACTTTGAAAAG...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTCTTATGTTCCCCTCTaGAGATGGGGGAAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPSYVPL*RWGKVG
Trigger: GCCTACCTTCCCCCATCTCCAGAGGGGAACATAAGA...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCACTGTTGTTAACAAACTaGCCAGTCTCAGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIALLLTN*PVSAQC
Trigger: GCACTGGGCTGAGACTGGCCAGTTTGTTAACAACAG...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTTTTCCAAAGGCCTCCTaGATCCGCAGAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLFPKAS*IRRTRH
Trigger: ATGCCTGGTTCTGCGGATCCAGGAGGCCTTTGGAAA...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCAGCTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCTTCCCCAATGATTGCTaGACTCCTGGGTATATGCTT +
Preference number: 4 (lower is better)
Translates to: SATLLESKGLVSFSIHPIFPNDC*TPGYML
Trigger: AAGCATATACCCAGGAGTCCAGCAATCATTGGGGAA...GATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATCCACACCAGCTGCTTaGGTCTTCCCATCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSASGLNKTSAYDFSEVRSTPAA*VFPSFS
Trigger: GCTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGA...TCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGCTGAGTTCTCCTGTCTaGTCTCACGGTCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PYDWGANQPRFANQSALKLSSPV*SHGQGA
Trigger: TGCTCCTTGACCGTGAGACCAGACAGGAGAACTCAG...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACGTGATAAGAGTGTATTaGACATCACTGAACACACGT +
Preference number: 4 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHVIRVY*TSLNTR
Trigger: ACGTGTGTTCAGTGATGTCCAATACACTCTTATCAC...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp CTGAAAACCTCTGACAATAAAGTTCTCACCGAAATGTaGCACATCACCAACTCCATCTTCCTTGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: LKTSDNKVLTEM*HITNSIFLGHL
Trigger: GAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTTATTGTCAGAGGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp GAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGAAATCTTACATAAACTaGAAGTCCGAGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ESKGLVSFSIHPIPPFLVKSYIN*KSEEQP
Trigger: TGGCTGCTCCTCGGACTTTCAGTTTATGTAAGATTT...CACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTAAATCTTACATAAACTaGAAGTCCGAGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFKSYIN*KSEEQP
Trigger: TGGCTGCTCCTCGGACTTTCAGTTTATGTAAGATTT...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGAGATGGTCCCCATCCTaGGTTTCCTCCTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FGKNAINSPVILSKWPCERWSPS*VSSWPS
Trigger: GGAAGGCCAGGAGGAAACTCAGGATGGGGACCATCT...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGCAAAAAGCCCATGGATaGAGTAGATCTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRQKAHG*SRSPGR
Trigger: CCGACCAGGAGATCTACTTCATCCATGGGCTTTTTG...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTAGAACCAGGCATTTGTaGTGGGTCTCATCCATGGCA +
Preference number: 4 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSRTRHL*WVSSMA
Trigger: TGCCATGGATGAGACCCATCACAAATGCCTGGTTCT...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTAGAACCAGGCATTTGTaGTGGGTCTCATCCATGGCA +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPRTRHL*WVSSMA
Trigger: TGCCATGGATGAGACCCATCACAAATGCCTGGTTCT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTGCAGGAAGATTCCTATaGACCAGCGTGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPAGRFL*TSVFLR
Trigger: CCTCAAGAACACGCTGGTTCATAGGAATCTTCCTGC...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGCTGACCTTGGTCACATaGAGCGTGCTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PYDWGANQPRFANQSALKLTLVT*SVLSSL
Trigger: AAGGGAAGAAAGCACGCTTCATGTGACCAAGGTCAG...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATATGGTGGCCCATCCAGTCGGCATTaGAGACCTCCGATGATGTCT +
Preference number: 4 (lower is better)
Translates to: SGLNKTSAYDFSEVRYGGPSSRH*RPPMMS
Trigger: AGACATCATCGGAGGTCTGCAATGCCGACTGGATGG...GCCACCATATCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGCCAGCCTTGTCTGCTaGTTTTCAATCCCGACTCTT +
Preference number: 4 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSASLVC*FSIPTL
Trigger: AAGAGTCGGGATTGAAAAGCAGCAGACAAGGCTGGC...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR GCA 90 bp TTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAAATAAACTGGGATCAGTaGCAGCCTTGTCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FCLSARETLCKDFIQNHKINWDQ*QPCLLL
Trigger: AAGCAGCAGACAAGGCTGGCACTGATCCCAGTTTAT...TTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR GCA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAATTTATTGTTGGCAGTTaGAGAATGAGTCATGAACCT +
Preference number: 4 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKFIVGS*RMSHEP
Trigger: AGGTTCATGACTCATTCTGCAACTGCCAACAATAAA...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTATTTCCAAAGGCCTCCTaGATCCGCAGAACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HPSASGLNKTSAYDFSEVFPKAS*IRRTRH
Trigger: ATGCCTGGTTCTGCGGATCCAGGAGGCCTTTGGAAA...TACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACGTTTGCCCAGGGCGCTaGAATCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYVCPGR*NLLSWP
Trigger: TGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAAC...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTCACTCAATACCCCAATaGGTCCTAGAGATCCTATTT +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFHSIPQ*VLEILF
Trigger: AAATAGGATCTCTAGGACCCATTGGGGTATTGAGTG...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAACTTCGTTCATGGGCATaGCTTGGTAGTGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEELRSWA*LGSDFS
Trigger: TGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp ATCTGGCATGCAGCAAACATGCATATCTATCTCTTGTaGGGCCCCACGCTAAAAAGATCTCCCATCATTGTT +
Preference number: 4 (lower is better)
Translates to: IWHAANMHIYLL*GPTLKRSPIIV
Trigger: AACAATGATGGGAGATCTTTTTAGCGTGGGGCCCAACAAGAGATAGATATGCATGTTTGCTGCATGCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp GATATCTGGCATGCAGCAAACATGCATATCTATCTCTaGTTGGGCCCCACGCTAAAAAGATCTCCCATCATT +
Preference number: 4 (lower is better)
Translates to: DIWHAANMHIYL*LGPTLKRSPII
Trigger: AATGATGGGAGATCTTTTTAGCGTGGGGCCCAACAAGAGATAGATATGCATGTTTGCTGCATGCCAGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGTCTTCACTCTGGGGGTaGGGATCGCTTGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: FGKNAINSPVILSKWPCESSLWG*GSLGRH
Trigger: ATGTCTCCCAAGCGATCCTCACCCCCAGAGTGAAGA...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TATTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACTTCCAGCGATTGCTATaGACCAGCGTGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: YLFCLSARETLCKDFIQNFQRLL*TSVFLR
Trigger: CCTCAAGAACACGCTGGTTCATAGCAATCGCTGGAA...GTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR TCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCACTCTCAGAAAAGTGGTaGCATCCAACAATCCTAGAG +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIALSEKW*HPTILE
Trigger: CTCTAGGATTGTTGGATGTCACCACTTTTCTGAGAG...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAACTTCAACTGTGGCATaGACTAAATCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEETSTVA*TKSAGW
Trigger: CCATCCTGCAGATTTAGTTCATGCCACAGTTGAAGT...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACCCAGTCTTTCCAAAATaGCTTTCTGGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYPVFPK*LSGWGT
Trigger: CGTCCCCCAGCCAGAAAGGCATTTTGGAAAGACTGG...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACTTTCAGGGCGACGCTTaGCACGCCAGTCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYFQGDA*HASLSK
Trigger: TTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAA...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp AGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAAGAAGAGGATTAGTTTaGGCACACTTGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: RETLCKDFIQNHKPCELGRRGLV*AHLWCL
Trigger: CAAACACCACAAGTGTGCGCAAACTAATCCTCTTCT...TCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CCCAATATGTATGATGGAGTAAGAACTTGTAAATATGTACTGAAAACCTCTGACGACCTCCACACCAGCTaGTTGGGTCTTCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: PNMYDGVRTCKYVLKTSDDLHTS*LGLPIL
Trigger: AAGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTC...GTCAGAGGTTTTCAGTACATATTTACAAGTTCTTACTCCATCATACATATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCGACAATCTTTATAAATaGATACATCCATTCGGGACT +
Preference number: 4 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSDNLYK*IHPFGT
Trigger: AGTCCCGAATGGATGTATGCATTTATAAAGATTGTC...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCATTCTATATATGTCACTaGGCTGGTACACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAFYICH*AGTQAG
Trigger: CCCAGCTTGTGTACCAGCCCAGTGACATATATAGAA...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGACTTCTTGGGCTCTGTaGACGTTTCAGGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: FGKNAINSPVILSKWPCETSWAL*TFQGDA
Trigger: AGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGT...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTGTGATCATCACTTCTTaGGCTCTGTGGACGTTTCAG +
Preference number: 4 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLVIITS*ALWTFQ
Trigger: CTGAAACGTCCACAGAGCCCAAGAAGTGATGATCAC...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CCCAATATGTATGATGGAGTAAGAACTTGTAAATATGTACTGAAAACCTCTGACTTGATAGCTTGGGTTTaGTCAGGCCCCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PNMYDGVRTCKYVLKTSDLIAWV*SGPTGD
Trigger: GTCCCCAGTGGGGCCTGACCAAACCCAAGCTATCAA...GTCAGAGGTTTTCAGTACATATTTACAAGTTCTTACTCCATCATACATATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp CCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATTCCACACTGCAGGCTaGGCACAGCTTGTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PSASGLNKTSAYDFSEVRFHTAG*AQLVSK
Trigger: TTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAA...TCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATATGGTGGCCCCGCTCACTCAGAGTaGTCTCCAAGAAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: SGLNKTSAYDFSEVRYGGPAHSE*SPRRGL
Trigger: TAATCCTCTTCTTGGAGACCACTCTGAGTGAGCGGG...GCCACCATATCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp AGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCTGGAGTCTAAAGGCTTaGTGTCTTTCTCTATACATC +
Preference number: 4 (lower is better)
Translates to: SLKAWCLSLYIPSHPFLCWSLKA*CLSLYI
Trigger: GATGTATAGAGAAAGACACCAAGCCTTTAGACTCCA...GCACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTCACCCAGTCCAGGATaGCAGGAAGATTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPSPSPG*QEDSYE
Trigger: TTCATAGGAATCTTCCTGCCATCCTGGACTGGGTGA...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTCCCAGAAAACCCTTTaGGGAGGGGTTCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPSQKTL*GGVQMQ
Trigger: TTGCATTTGAACCCCTCCCCAAAGGGTTTTCTGGGA...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGATAGCACCAAACACCTaGACAAAGCCGAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRIAPNT*TKPRLK
Trigger: TTTGAGCCTCGGCTTTGTCCAGGTGTTTGGTGCTAT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCCGTGCATGCAACCTTaGTACAGTTTTCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPPCMQP*YSFLGF
Trigger: AAAGCCCAGAAAACTGTACCAAGGTTGCATGCACGG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAAATTGCAAGCAAGGCTaGCAGCTCCAAGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKNCKQG*QLQAAW
Trigger: CCATGCTGCTTGGAGCTGCCAGCCTTGCTTGCAATT...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTAGATGGATCATTACCTaGGCTCAGATTTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFRWIIT*AQILCF
Trigger: AAAGCACAAAATCTGAGCCCAGGTAATGATCCATCT...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp TGTTTTCAAGGAGTTATAGAATGGCTCCAAATCCACTaGGAGCTTCCTCCTTTAATGCCATTGCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CFQGVIEWLQIH*ELPPLMPLQFP
Trigger: GGGAAACTGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACTCCTTGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp GACACACGAGTCATCCTAAATATCCCCGAGGTAGTCTaGTTTTCAAGGAGTTATAGAATGGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: DTRVILNIPEVV*FSRSYRMAPNP
Trigger: TGGATTTGGAGCCATTCTATAACTCCTTGAAAACAAGACTACCTCGGGGATATTTAGGATGACTCGTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp AATCATGTAAACATTTCATGGAACAGTCAGCAGCCCTaGGGTGTTACTGGCATCCTGTGTAGATACTTGTCA +
Preference number: 4 (lower is better)
Translates to: NHVNISWNSQQP*GVTGILCRYLS
Trigger: TGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCTGACTGTTCCATGAAATGTTTACATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp CTGGGAAAGCCCACCTCTCAAGAGTCCACATACATGTaGGCAGATTTCTTTGAGCTCTACACATTTCATTAT +
Preference number: 4 (lower is better)
Translates to: LGKPTSQESTYM*ADFFELYTFHY
Trigger: ATAATGAAATGTGTAGAGCTCAAAGAAATCTGCCAACATGTATGTGGACTCTTGAGAGGTGGGCTTTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAAGGACTTTGCCAAAATaGTGCAGGTGCTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKRTLPK*CRCSTW
Trigger: CCAGGTAGAGCACCTGCATCATTTTGGCAAAGTCCT...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAATGAGAGCCTTGTTTTaGTCTGAAAGGTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAMRALF*SERSPE
Trigger: TTCTGGAGACCTTTCAGATCAAAACAAGGCTCTCAT...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTATCCTTCTGTATCCATaGAATCCTGGTGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLILLYP*NPGGLS
Trigger: AGAGAGACCACCAGGATTTCATGGATACAGAAGGAT...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATATGGTGGCATAAACTGGGATCAGTaGCAGCCTATGAACCAGCGT +
Preference number: 4 (lower is better)
Translates to: SGLNKTSAYDFSEVRYGGINWDQ*QPMNQR
Trigger: ACGCTGGTTCATAGGCTGGCACTGATCCCAGTTTAT...GCCACCATATCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393934.7
CDS-3UTR GCA 90 bp CTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTCTCACCGAAATGTTaGACATCACCAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: LCKDFIQNHKPCELGVVVFSPKC*TSPTPS
Trigger: AGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAA...TACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAACAGAAACAGGAAACTaGTGGAAGAAGAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEETETGN*WKKSLT
Trigger: TGTCAGACTCTTCTTCCAGCAGTTTCCTGTTTCTGT...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAGCAGGACTCCGTGCATaGAACCTTGGTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKAGLRA*NLGTVF
Trigger: GAAAACTGTACCAAGGTTGCATGCACGGAGTCCTGC...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACTCACTATTTTATTGTTaGCAGTTGCAGAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDSLFYC*QLQNES
Trigger: TGACTCATTCTGCAACTGCCAACAATAAAATAGTGA...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAGGAAATATGGCTGTGTaGGAAATGGTCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKGNMAV*EMVQGA
Trigger: AGCTCCCTGGACCATTTCCCACACAGCCATATTTCC...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAGGAAGCACTTTCTCATaGCAAGATTCTCAAAACGAG +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAGSTFS*QDSQNE
Trigger: CTCGTTTTGAGAATCTTGCCATGAGAAAGTGCTTCC...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAGTAGTAATGTCTCATTaGGAAGCACTTTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEEVVMSH*EALSHG
Trigger: GCCATGAGAAAGTGCTTCCCAATGAGACATTACTAC...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATATGGTGGCGCGCCGGCTCTAGCCTaGTTTATGTTTCTATATATG +
Preference number: 4 (lower is better)
Translates to: SGLNKTSAYDFSEVRYGGAPALA*FMFLYM
Trigger: CATATATAGAAACATAAATCAGGCTAGAGCCGGCGC...GCCACCATATCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TTTATAAGCCTATTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTAGAACCAGGCATTTGTaGTGGGTCTCATCCATGGCA +
Preference number: 4 (lower is better)
Translates to: FISLFILFECQGNPLQRFRTRHL*WVSSMA
Trigger: TGCCATGGATGAGACCCATCACAAATGCCTGGTTCT...AAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAATAGGCTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCATTGGCAGTTGCAGAATaGGTCATGAACCTAAAATCT +
Preference number: 4 (lower is better)
Translates to: SYRMAPNPLGASSFNAIALAVAE*VMNLKS
Trigger: AGATTTTAGGTTCATGACTCATTCTGCAACTGCCAA...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTAGCCTTGTTTTGATCTaGAAGGTCTCCAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPSLVLI*KVSRTC
Trigger: ACAAGTTCTGGAGACCTTTCAGATCAAAACAAGGCT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTAGTTCTGAGCAAGTATaGGAGCCTTGTTTTGATCTG +
Preference number: 4 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLSSEQV*EPCFDL
Trigger: CAGATCAAAACAAGGCTCTCATACTTGCTCAGAACT...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp CCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGAGGACTCCTGGGTATATaGTTGAAAATGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PSASGLNKTSAYDFSEVRGLLGI*LKMPAH
Trigger: ATGAGCTGGCATTTTCAAGCATATACCCAGGAGTCC...TCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR GCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGTTTGATGGTCCCCTTTaGCACAAAGCCATGGAAATA +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRFDGPL*HKAMEI
Trigger: TATTTCCATGGCTTTGTGGCAAAGGGGACCATCAAA...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTCATCAAGAGAAGGACTaGAAATGTTCCAACACTAGG +
Preference number: 4 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLHQEKD*KCSNTR
Trigger: CCTAGTGTTGGAACATTTCCAGTCCTTCTCTTGATG...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGGAAACAGGAAACTGCTaGAAGAAGAGTCTGACAATC +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRETGNC*KKSLTI
Trigger: GATTGTCAGACTCTTCTTCCAGCAGTTTCCTGTTTC...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGACAAAGGGTAAAAAGTaGGGAAATGATCTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PYDWGANQPRFANQSALKTKGKK*GNDLAP
Trigger: AGGGGCTAGATCATTTCCCCACTTTTTACCCTTTGT...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGACTTGTGAGAATAAGTaGTGTGGTTGGGTCACTATT +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRTCENK*CGWVTI
Trigger: AATAGTGACCCAACCACATCACTTATTCTCACAAGT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTAAAAGTAGTATTCTATaGAGGAGACGGGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLKSSIL*RRREGM
Trigger: CATTCCTTCCCGTCTCCTTCATAGAATACTACTTTT...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCTGAATTTCTTCTGTTaGTCCACCTTTAGCATTGTG +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPLNFFC*STFSIV
Trigger: CACAATGCTAAAGGTGGAGCAACAGAAGAAATTCAG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACCCAGGAATGTGTTTCTaGTTCAACTTTTTCACCGGC +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYPGMCF*FNFFTG
Trigger: GCCGGTGAAAAAGTTGAACCAGAAACACATTCCTGG...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGGCTAAGCCTCCTAGCTaGGAGGTAGTAATGTCTCAT +
Preference number: 4 (lower is better)
Translates to: FGKNAINSPVILSKWPCEAKPPS*EVVMSH
Trigger: ATGAGACATTACTACCTCCCAGCTAGGAGGCTTAGC...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTATCTGCAGGATGGACTaGTTTCATGTAGCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LLLSREGPTEFDIIPENPICRMD*FHVALL
Trigger: TAAAAGAGCTACATGAAACCAGTCCATCCTGCAGAT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp AATAAAACCCTGAGGGTAGACCAGGGATTTCAGAGCTaGTCATTAGCATTTAGCATCAGAATTGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NKTLRVDQGFQS*SLAFSIRIEGK
Trigger: CTTTCCTTCAATTCTGATGCTAAATGCTAATGACAAGCTCTGAAATCCCTGGTCTACCCTCAGGGTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGCATCTTAGTGATAAATaGGTCCTACTCTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRHLSDK*VLLSQK
Trigger: TTTCTGAGAGAGTAGGACTCATTTATCACTAAGATG...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGCAGCATCTTCAAAGATaGAGGAACCAAGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: PYDWGANQPRFANQSALKQHLQR*RNQERF
Trigger: AAATCTTTCTTGGTTCCTTCATCTTTGAAGATGCTG...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACCAAGCCCCTGCTATTTaGATTAAGTATTGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYQAPAI*IKYWSQ
Trigger: TTGGGACCAATACTTAATTCAAATAGCAGGGGCTTG...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTTATAAGCCTATTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTTCTCAAAGGATAAACTaGGATCAGTGCCAGCCTATG +
Preference number: 4 (lower is better)
Translates to: FISLFILFECQGNPLQRFSQRIN*DQCQPM
Trigger: CATAGGCTGGCACTGATCCCAGTTTATCCTTTGAGA...AAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAATAGGCTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393934.7
CDS-3UTR CCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACTTTTATCTTCGTTCATaGGCATGGCTTGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYFYLRS*AWLGSD
Trigger: GTCACTACCAAGCCATGCCCATGAACGAAGATAAAA...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGAAAGCCATGGAAATATaGCTGTGTGGGAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: FGKNAINSPVILSKWPCEKAMEI*LCGKWS
Trigger: GGACCATTTCCCACACAGCCATATTTCCATGGCTTT...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAATGTTTATCTGAAGAATaGGGTGACCAGTTACCAGTA +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKCLSEE*GDQLPV
Trigger: TACTGGTAACTGGTCACCTCATTCTTCAGATAAACA...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACGTAATTTTATCTAAATaGCCCTGTGAGGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYVILSK*PCEEGR
Trigger: TCTCCCTTCCTCACAGGGCCATTTAGATAAAATTAC...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAACACAAACTTCAACTGTaGCATGAACTAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKHKLQL*HELNLQ
Trigger: CTGCAGATTTAGTTCATGCCACAGTTGAAGTTTGTG...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACAGTCCACATACATGTTaGCAGATTTCTTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYSPHTC*QISLSS
Trigger: AGAGCTCAAAGAAATCTGCCAACATGTATGTGGACT...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR TCA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAGGTTCACGTATCATCTaGATTGACCAAGACTTATTT +
Preference number: 4 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKGSRII*IDQDLF
Trigger: AAATAAGTCTTGGTCAATTCAGATGATACGTGAACC...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CCA 90 bp CCCAATATGTATGATGGAGTAAGAACTTGTAAATATGTACTGAAAACCTCTGACTGGAGTCTAAAGGCTTaGTGTCTTTCTCTATACATC +
Preference number: 4 (lower is better)
Translates to: PNMYDGVRTCKYVLKTSDWSLKA*CLSLYI
Trigger: GATGTATAGAGAAAGACACCAAGCCTTTAGACTCCA...GTCAGAGGTTTTCAGTACATATTTACAAGTTCTTACTCCATCATACATATTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR TCA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGTTATCATGCAAACACTaGGGTGCACTTAAATGTTAC +
Preference number: 4 (lower is better)
Translates to: FGKNAINSPVILSKWPCELSCKH*GALKCY
Trigger: GTAACATTTAAGTGCACCTCAGTGTTTGCATGATAA...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
3UTR CAA 72 bp TGCTATGCAAAAGAAACTTCCTGTCAGTTTGGATATTaGATGCTATCATTTCTATTCACTTCCTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: CYAKETSCQFGY*MLSFLFTSSWH
Trigger: ATGCCAAGAGGAAGTGAATAGAAATGATAGCATCAAATATCCAAACTGACAGGAAGTTTCTTTTGCATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR GCA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGACAACCCAAGTGAAGTaGAACCATATATTTAAGAAC +
Preference number: 4 (lower is better)
Translates to: FGKNAINSPVILSKWPCETTQVK*NHIFKN
Trigger: GTTCTTAAATATATGGTTGCACTTCACTTGGGTTGT...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS GCA 90 bp ACCCGGAGCCACTCACAAGACAGGTGCCCACCCAGTGTACAGACATaGCTGCGGGTCCATACACAGGTGCGCGCCCGGGCGCGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: TRSHSQDRCPPSVQT*LRVHTQVRARARRL
Trigger: GAGCCGGCGCGCCCGGGCGCGCACCTGTGTATGGACCCGCAGGCATGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTGGCTCCGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 90 bp GGAGCCACTCACAAGACAGGTGCCCACCCAGTGTACAGACATGCCTaGGGGTCCATACACAGGTGCGCGCCCGGGCGCGCCGGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: GATHKTGAHPVYRHA*GSIHRCAPGRAGSS
Trigger: GCTAGAGCCGGCGCGCCCGGGCGCGCACCTGTGTATGGACCCGCAGGCATGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS TCA 90 bp ACTCCCCCGCTTCTCTGCACAGACGCCCCCTGCCCTGTGGCTTCCTaGAAGACACACAGAAGTGCAGCCGGCGGCACCAGGACTCCCAGC +
Preference number: 5 (lower is better)
Translates to: TPPLLCTDAPCPVAS*KTHRSAAGGTRTPS
Trigger: GCTGGGAGTCCTGGTGCCGCCGGCTGCACTTCTGTGTGTCTTTCAGGAAGCCACAGGGCAGGGGGCGTCTGTGCAGAGAAGCGGGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 90 bp GGTGCCCACCCAGTGTACAGACATGCCTGCGGGTCCATACACAGGTaGGCGCCCGGGCGCGCCGGCTCTAGCCTGATTTATGTTTCTATA +
Preference number: 5 (lower is better)
Translates to: GAHPVYRHACGSIHR*APGRAGSSLIYVSI
Trigger: TATAGAAACATAAATCAGGCTAGAGCCGGCGCGCCCGGGCGCGCACCTGTGTATGGACCCGCAGGCATGTCTGTACACTGGGTGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 90 bp GAAAGTCCGAGGAGCAGCCACACCCGGAGCCACTCACAAGACAGGTaGCCACCCAGTGTACAGACATGCCTGCGGGTCCATACACAGGTG +
Preference number: 5 (lower is better)
Translates to: ESPRSSHTRSHSQDR*PPSVQTCLRVHTQV
Trigger: CACCTGTGTATGGACCCGCAGGCATGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTGGCTCCGGGTGTGGCTGCTCCTCGGACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS TCA 90 bp GCGGGTCCATACACAGGTGCGCGCCCGGGCGCGCCGGCTCTAGCCTaGTTTATGTTTCTATATATGTCACTGGGCTGGTACACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: AGPYTGARPGAPALA*FMFLYMSLGWYTSW
Trigger: CCAGCTTGTGTACCAGCCCAGTGACATATATAGAAACATAAATCAGGCTAGAGCCGGCGCGCCCGGGCGCGCACCTGTGTATGGACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 90 bp TGTTTCTATATATGTCACTGGGCTGGTACACAAGCTGGGCCTGCCTaGTACTCACTCCCCCGCTTCTCTGCACAGACGCCCCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: CFYICHWAGTQAGPA*YSLPRFSAQTPPAL
Trigger: CAGGGCAGGGGGCGTCTGTGCAGAGAAGCGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTGTGTACCAGCCCAGTGACATATATAGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS-3UTR CAA 90 bp CCATTGCAGTTTCCCATGCATCCTGCGCCTGCTTCCATGGTGCCATGGATAAGGCCTCCGATGATGTCTTaGTCCCGCTGGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PLQFPMHPAPASMVPWIRPPMMS*SRWGWG
Trigger: CCCCCAACCCCAGCGGGACAAAGACATCATCGGAGG...CCTTATCCATGGCACCATGGAAGCAGGCGCAGGATGCATGGGAAACTGCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS GCA 90 bp GTGATCATCACTTCTTGGGCTCTGTGGACGTTTCAGGGCGACGCTTaGCACGCCAGTCTTTCCAAAATGCCTTTCTGGCTGGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: VIITSWALWTFQGDA*HASLSKMPFWLGDG
Trigger: CCCGTCCCCCAGCCAGAAAGGCATTTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGTGATGATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 90 bp GGCAGTTCTTCTCCCACAGAGTTCGCAGCGTCAAACTTTCCACACTaGAGGCTGGGCACAGCTTGTTTCCAAAGGCCTCCTGGATCCGCA +
Preference number: 5 (lower is better)
Translates to: GSSSPTEFAASNFPH*RLGTACFQRPPGSA
Trigger: TGCGGATCCAGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGACGCTGCGAACTCTGTGGGAGAAGAACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 90 bp CTTCTCCCACAGAGTTCGCAGCGTCAAACTTTCCACACTGCAGGCTaGGCACAGCTTGTTTCCAAAGGCCTCCTGGATCCGCAGAACCAG +
Preference number: 5 (lower is better)
Translates to: LLPQSSQRQTFHTAG*AQLVSKGLLDPQNQ
Trigger: CTGGTTCTGCGGATCCAGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGACGCTGCGAACTCTGTGGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS-3UTR CAA 90 bp AGGATTGCCAGCCTCAGGCTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATACAGGCTGGGCACAGCTaGTTTCCAAAGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RIASLRLSSPMIAGLLGIQAGHS*FPKASW
Trigger: CCAGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTG...TATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAGCCTGAGGCTGGCAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS GCA 90 bp TTTATGTTTCTATATATGTCACTGGGCTGGTACACAAGCTGGGCCTaGCTGCTACTCACTCCCCCGCTTCTCTGCACAGACGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: FMFLYMSLGWYTSWA*LLLTPPLLCTDAPC
Trigger: GCAGGGGGCGTCTGTGCAGAGAAGCGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTGTGTACCAGCCCAGTGACATATATAGAAACATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 90 bp CAGCCCAGTGCCACTCACTCAGTGATCATCACTTCTTGGGCTCTGTaGACGTTTCAGGGCGACGCTTGCCACGCCAGTCTTTCCAAAATG +
Preference number: 5 (lower is better)
Translates to: QPSATHSVIITSWAL*TFQGDACHASLSKM
Trigger: CATTTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCACTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 90 bp GCGCACACTTGTGGTGTTTGCCCAGGGCGCTGGAATCTTCTTTCCTaGCCACAGGAAGGGGTACTGCTTGTAGAAGGGACAGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: AHTCGVCPGRWNLLS*PQEGVLLVEGTVVE
Trigger: TTCTACCACTGTCCCTTCTACAAGCAGTACCCCTTCCTGTGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 90 bp CTTGGGAGACATGGAAGGAGCCCCGTGAGGCCCGCTCACTCAGAGTaGTCTCCAAGAAGAGGATTAGTTTGCGCACACTTGTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LGRHGRSPVRPAHSE*SPRRGLVCAHLWCL
Trigger: CAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTCTGAGTGAGCGGGCCTCACGGGGCTCCTTCCATGTCTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS-3UTR CAA 90 bp CTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGGGGTGAGGATCGCTaGGGAGACATGGAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LTEMLHITNSIFLGHLSLGGEDR*GDMEGA
Trigger: GGCTCCTTCCATGTCTCCCAAGCGATCCTCACCCCC...AAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS CCA 90 bp GCCAAAAAGCCCATGGATGAAGTAGATCTCCTGGTCGGCATCCCCTaGTTTGGAAGACACACGCAGGTCAAAGTAGCGGATCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AKKPMDEVDLLVGIP*FGRHTQVKVADPSF
Trigger: GAAGCTGGGATCCGCTACTTTGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCGACCAGGAGATCTACTTCATCCATGGGCTTTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393934.7
ENST00000468174.1
ENST00000477665.2
ENST00000636933.1
CDS-3UTR CAA 90 bp AGCAGCCCTTGGGTGTTACTGGCATCCTGTGTAGATACTTGTCAACACACCTGGGCCATCCAGTCGGCATaGCAGACCTCCGATGATGTC +
Preference number: 5 (lower is better)
Translates to: SSPWVLLASCVDTCQHTWAIQSA*QTSDDV
Trigger: GACATCATCGGAGGTCTGCAATGCCGACTGGATGGC...CCAGGTGTGTTGACAAGTATCTACACAGGATGCCAGTAACACCCAAGGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp ACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCCAGGCTGGGCACAGCTaGTTTCCAAAGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLLESKGLVSFSIHPIPPQAGHS*FPKASW
Trigger: CCAGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTG...GGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCCAGGCTGGGCACAGCTaGTTTCCAAAGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSQAGHS*FPKASW
Trigger: CCAGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTG...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp ATGACTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATTAGTTTGCGCACACTaGTGGTGTTTGCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: MTDESLGKTSTPAAWVFPLVCAH*WCLPRA
Trigger: CGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAA...TGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACGGGGGTGAGGATCGCTaGGGAGACATGGAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDGGEDR*GDMEGA
Trigger: GGCTCCTTCCATGTCTCCCAAGCGATCCTCACCCCC...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp ATGACTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATTGGGAGTAGTCGTATaGGAGCCTCCTCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: MTDESLGKTSTPAAWVFPLGVVV*EPPPSS
Trigger: TGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAA...TGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS CCA 90 bp CACTCAGAGTGGTCTCCAAGAAGAGGATTAGTTTGCGCACACTTGTaGTGTTTGCCCAGGGCGCTGGAATCTTCTTTCCTGGCCACAGGA +
Preference number: 5 (lower is better)
Translates to: HSEWSPRRGLVCAHL*CLPRALESSFLATG
Trigger: TCCTGTGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS-3UTR CAA 90 bp CTGATGAGTCACTGGGAAAGACCTCCACACCAGCTGCTTGGGTCTTCCCATCCTCTGCTAGCATCCCTGTaGTTAACAAACTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LMSHWERPPHQLLGSSHPLLASL*LTNWPV
Trigger: GACTGGCCAGTTTGTTAACAACAGGGATGCTAGCAG...AGGATGGGAAGACCCAAGCAGCTGGTGTGGAGGTCTTTCCCAGTGACTCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGCCTCCGATGATGTCTTaGTCCCGCTGGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PGKPFAKISSRTTNPVNWPPMMS*SRWGWG
Trigger: CCCCCAACCCCAGCGGGACAAAGACATCATCGGAGG...CCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTAGAGGCGTTTGATAGCTaGGGTTTGGTCAGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PKCCTSPTPSSLGTSLLVEAFDS*GLVRPH
Trigger: GTGGGGCCTGACCAAACCCAAGCTATCAAACGCCTC...TACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACGAGGCGTTTGATAGCTaGGGTTTGGTCAGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHEAFDS*GLVRPH
Trigger: GTGGGGCCTGACCAAACCCAAGCTATCAAACGCCTC...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TCCAGAAGCTGCCACTTCCTTAGGGATTCTCAGATGGTGCTGAGGAGCAACAAATCGGCATCCCCTGGTTaGGAAGACACACGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SRSCHFLRDSQMVLRSNKSASPG*EDTRRS
Trigger: TGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCGA...TTTGTTGCTCCTCAGCACCATCTGAGAATCCCTAAGGAAGTGGCAGCTTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCTTTCTTGTGCGGGGGTGAGGATCGCTaGGGAGACATGGAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SLKAWCLSLYIPSHPFLCGGEDR*GDMEGA
Trigger: GGCTCCTTCCATGTCTCCCAAGCGATCCTCACCCCC...GCACAAGAAAGGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTCCTCTTGGGAGTAGTCGTATaGGAGCCTCCTCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LHITNSIFLGHLSLGILLLGVVV*EPPPSS
Trigger: TGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAA...GAGGAGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS GCA 90 bp CTGCTAGCATCCCTGTTGTTAACAAACTGGCCAGTCTCAGCCCAGTaGCACTCACTCAGTGATCATCACTTCTTGGGCTCTGTGGACGTT +
Preference number: 5 (lower is better)
Translates to: LLASLLLTNWPVSAQ*HSLSDHHFLGSVDV
Trigger: AACGTCCACAGAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCACTGGGCTGAGACTGGCCAGTTTGTTAACAACAGGGATGCTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS-3UTR CAA 90 bp AAAGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCGTTTCAGGGCGACGCTaGCCACGCCAGTCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: KVLTEMLHITNSIFLGHLVSGRR*PRQSFQ
Trigger: TTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAAC...GAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp AATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATCCTGTTTCAGGGCGACGCTaGCCACGCCAGTCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: NVAHHQLHLPWAPLSWYPVSGRR*PRQSFQ
Trigger: TTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAAC...AGGATACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CAGCTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCGCCATCCAGTCGGCATaGCAGACCTCCGATGATGTC +
Preference number: 5 (lower is better)
Translates to: QLLCWSLKAWCLSLYIPSAIQSA*QTSDDV
Trigger: GACATCATCGGAGGTCTGCAATGCCGACTGGATGGC...GGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCATGTGAGCCTGGGATaGCCAGATTGGAAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSHVSLG*PDWKGG
Trigger: TCCCCCTTTCCAATCTGGCAATCCCAGGCTCACATG...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTGGTATTTGATAGCTTGGGTTaGGTCAGGCCCCACTGGGGA +
Preference number: 5 (lower is better)
Translates to: PKCCTSPTPSSLGTSLLVFDSLG*VRPHWG
Trigger: TCCCCAGTGGGGCCTGACCAAACCCAAGCTATCAAA...TACCAAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp ACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACCCAGCCCATCCCAGACCTaGATGCCAAAAAGCCCATGG +
Preference number: 5 (lower is better)
Translates to: TLLESKGLVSFSIHPIPPSPSQT*MPKSPW
Trigger: CCATGGGCTTTTTGGCATCAAGGTCTGGGATGGGCT...GGGTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGCCATCCAGTCGGCATaGCAGACCTCCGATGATGTC +
Preference number: 5 (lower is better)
Translates to: PGKPFAKISSRTTNPVNWAIQSA*QTSDDV
Trigger: GACATCATCGGAGGTCTGCAATGCCGACTGGATGGC...CCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCCCACTTTGATAGCTTGGGTTaGGTCAGGCCCCACTGGGGA +
Preference number: 5 (lower is better)
Translates to: LLCWSLKAWCLSLYIPSHFDSLG*VRPHWG
Trigger: TCCCCAGTGGGGCCTGACCAAACCCAAGCTATCAAA...GTGGGATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTTCGGCATCCCCTGGTTaGGAAGACACACGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPSASPG*EDTRRS
Trigger: TGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCGA...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CTCTCTTCCCCAATGATTGCTGGACTCCTGGGTATATGCTTGAAAATGCCAGCTAGCCCATCCCAGACCTaGATGCCAAAAAGCCCATGG +
Preference number: 5 (lower is better)
Translates to: LSSPMIAGLLGICLKMPASPSQT*MPKSPW
Trigger: CCATGGGCTTTTTGGCATCAAGGTCTGGGATGGGCT...AGCTGGCATTTTCAAGCATATACCCAGGAGTCCAGCAATCATTGGGGAAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp GATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTATTGGAGCCTGCACACTTGTGGTGTTaGCCCAGGGCGCTGGAATCT +
Preference number: 5 (lower is better)
Translates to: DFIQNHKPCELGVVVLEPAHLWC*PRALES
Trigger: AGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGC...AGGCTCCAATACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp GGAGTAGTCGTATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTTTAGTTTGCGCACACTaGTGGTGTTTGCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: GVVVLEPPPSSDMSISATLVCAH*WCLPRA
Trigger: CGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAA...AGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATACGACTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCTCAGATGTGATGATGTaGACACCCATGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSSDVMM*TPMAPG
Trigger: GCCTGGAGCCATGGGTGTCAACATCATCACATCTGA...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS TCA 90 bp GGCACCTCTCTCTTGGTATCCTCCTCCTCCATCAGGATCTTCTGCTaGATCTCAAAGGATAAACTGGGATCAGTGCCAGCCTATGAACCA +
Preference number: 5 (lower is better)
Translates to: GTSLLVSSSSIRIFC*ISKDKLGSVPAYEP
Trigger: TGGTTCATAGGCTGGCACTGATCCCAGTTTATCCTTTGAGATTCAGCAGAAGATCCTGATGGAGGAGGAGGATACCAAGAGAGAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393934.7
CDS-3UTR CAA 90 bp TATTGGAGCCTCCTCCCTCCTCAGATATGTCAATATCAGCTACTCTGCTGGAGTATCCTGGCGAGGCGTTaGATAGCTTGGGTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: YWSLLPPQICQYQLLCWSILARR*IAWVWS
Trigger: TGACCAAACCCAAGCTATCAAACGCCTCGCCAGGAT...ACTCCAGCAGAGTAGCTGATATTGACATATCTGAGGAGGGAGGAGGCTCCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTAGCCCATCCCAGACCTaGATGCCAAAAAGCCCATGG +
Preference number: 5 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFSPSQT*MPKSPW
Trigger: CCATGGGCTTTTTGGCATCAAGGTCTGGGATGGGCT...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGACTCCACACCAGCTGCTaGGGTCTTCCCATCCTTCAG +
Preference number: 5 (lower is better)
Translates to: RETLCKDFIQNHKPCELGLHTSC*GLPILQ
Trigger: CTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGAG...TCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACGTTCATGGGCATGGCTaGGTAGTGACTTCTCAGATC +
Preference number: 5 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHVHGHG*VVTSQI
Trigger: GATCTGAGAAGTCACTACCAAGCCATGCCCATGAAC...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTTAGTGATCATCACTTCTaGGGCTCTGTGGACGTTTCA +
Preference number: 5 (lower is better)
Translates to: LTEMLHITNSIFLGHLSLSDHHF*GSVDVS
Trigger: TGAAACGTCCACAGAGCCCAAGAAGTGATGATCACT...AAGAGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAATCGGCATCCCCTGGTTaGGAAGACACACGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: FCLSARETLCKDFIQNHKSASPG*EDTRRS
Trigger: TGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCGA...TTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAGCACACTTGTGGTGTTaGCCCAGGGCGCTGGAATCT +
Preference number: 5 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEEAHLWC*PRALES
Trigger: AGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGC...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCATTCCAAGATCAGGCTaGAAGACCCCACTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSIPRSG*KTPLQR
Trigger: TCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAAT...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCTGGCTCCAAATCCACTaGGAGCTTCCTCCTTTAATG +
Preference number: 5 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSWLQIH*ELPPLM
Trigger: CATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCA...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCATCCTGTGTAGATACTaGTCAACACACCTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSILCRY*STHLAS
Trigger: TGAGGCCAGGTGTGTTGACAAGTATCTACACAGGAT...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS GCA 90 bp ACAGTCTGTAATTCCACAGCTGAGCCTGAATCCCAGTGCTGGTTCTaGTGTGATTACTTCTGTGAACCTGGGCTTCCAAACTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: TVCNSTAEPESQCWF*CDYFCEPGLPNLYL
Trigger: CAAGTACAAGTTTGGAAGCCCAGGTTCACAGAAGTAATCACAGCAGAACCAGCACTGGGATTCAGGCTCAGCTGTGGAATTACAGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468174.1
CDS GCA 90 bp GTTGAAGAAACAGTCTGTAATTCCACAGCTGAGCCTGAATCCCAGTaGTGGTTCTGCTGTGATTACTTCTGTGAACCTGGGCTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VEETVCNSTAEPESQ*WFCCDYFCEPGLPN
Trigger: GTTTGGAAGCCCAGGTTCACAGAAGTAATCACAGCAGAACCAGCACTGGGATTCAGGCTCAGCTGTGGAATTACAGACTGTTTCTTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468174.1
CDS GCA 90 bp ATGGTGTTCTCTTCATGTGCTTGTGTCCACATTTCCCTTGTCTGCTaGTTTTCAATCCCGACTCTTCCCTCAGCTTCTTTCCTGACTCAG +
Preference number: 5 (lower is better)
Translates to: MVFSSCACVHISLVC*FSIPTLPSASFLTQ
Trigger: CTGAGTCAGGAAAGAAGCTGAGGGAAGAGTCGGGATTGAAAAGCAGCAGACAAGGGAAATGTGGACACAAGCACATGAAGAGAACACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS CCA 90 bp GAAGAAACAGTCTGTAATTCCACAGCTGAGCCTGAATCCCAGTGCTaGTTCTGCTGTGATTACTTCTGTGAACCTGGGCTTCCAAACTTG +
Preference number: 5 (lower is better)
Translates to: EETVCNSTAEPESQC*FCCDYFCEPGLPNL
Trigger: CAAGTTTGGAAGCCCAGGTTCACAGAAGTAATCACAGCAGAACCAGCACTGGGATTCAGGCTCAGCTGTGGAATTACAGACTGTTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468174.1
CDS-3UTR CAA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTGTTTCAGGGCGACGCTaGCCACGCCAGTCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLVSGRR*PRQSFQ
Trigger: TTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAAC...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACAGGAGGTCATTCAACTaGATGACAGTCGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDRRSFN*MTVAAK
Trigger: CTTTGCTGCGACTGTCATCAAGTTGAATGACCTCCT...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACCATATCTATCTCTTGTaGGGCCCCACGCTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHHIYLL*GPTLKR
Trigger: TCTTTTTAGCGTGGGGCCCAACAAGAGATAGATATG...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGGCCTTCCACTTAGCGTaGTGTCCCACAGTGCAGACC +
Preference number: 5 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRAFHLA*CPTVQT
Trigger: GGTCTGCACTGTGGGACACAACGCTAAGTGGAAGGC...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AGATCCTATTTCCAAATTCCATTCACCACCATAAGCCACTGGGGAGGTCCTGACCTAGGTATTTCTCACTaGGTGACACACGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: RSYFQIPFTTISHWGGPDLGISH*VTHESS
Trigger: GGATGACTCGTGTGTCACCAAGTGAGAAATACCTAG...GTCAGGACCTCCCCAGTGGCTTATGGTGGTGAATGGAATTTGGAAATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAATCCTACATCACACTGTaGGGAAATAAGCCCAAGCAG +
Preference number: 5 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQSYITL*GNKPKQ
Trigger: CTGCTTGGGCTTATTTCCCAACAGTGTGATGTAGGA...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAAGACTGTTGATGGGCTaGCCTCGGCAAATGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEERLLMG*PRQMVS
Trigger: GCTCACCATTTGCCGAGGCAAGCCCATCAACAGTCT...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS GCA 90 bp GCTCGTAGATGGCCATCTTTATGTTCACATGGTGTTCTCTTCATGTaGTTGTGTCCACATTTCCCTTGTCTGCTGCTTTTCAATCCCGAC +
Preference number: 5 (lower is better)
Translates to: ARRWPSLCSHGVLFM*LCPHFPCLLLFNPD
Trigger: GTCGGGATTGAAAAGCAGCAGACAAGGGAAATGTGGACACAAGCACATGAAGAGAACACCATGTGAACATAAAGATGGCCATCTACGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS-3UTR CAA 90 bp TTTATAAGCCTATTTATTCTGTTTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCCTCCGATGATGTCTTaGTCCCGCTGGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: FISLFILFECQGNPLQRFPPMMS*SRWGWG
Trigger: CCCCCAACCCCAGCGGGACAAAGACATCATCGGAGG...AAATCTTTGCAAAGGGTTTCCCTGGCACTCAAACAGAATAAATAGGCTTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGCATGTGAGCCTGGGATaGCCAGATTGGAAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRHVSLG*PDWKGG
Trigger: TCCCCCTTTCCAATCTGGCAATCCCAGGCTCACATG...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGAGAGGCGTTTGATAGCTaGGGTTTGGTCAGGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PSASGLNKTSAYDFSEVREAFDS*GLVRPH
Trigger: GTGGGGCCTGACCAAACCCAAGCTATCAAACGCCTC...TCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGTTAGTTTGCGCACACTaGTGGTGTTTGCCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PYDWGANQPRFANQSALKLVCAH*WCLPRA
Trigger: CGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAA...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TGGTTCAACTTTTTCACCGGCTCAAACACAACACCCCAGACGACAATAGGGAGCAAGAAGAGGATTAGTTaGCGCACACTTGTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: WFNFFTGSNTTPQTTIGSKKRIS*RTLVVF
Trigger: AAACACCACAAGTGTGCGCAAACTAATCCTCTTCTT...GCTCCCTATTGTCGTCTGGGGTGTTGTGTTTGAGCCGGTGAAAAAGTTGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TTGAGTGCCAGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGTTCTCACCGAAATGTaGCACATCACCAACTCCATC +
Preference number: 5 (lower is better)
Translates to: LSARETLCKDFIQNHKPCVLTEM*HITNSI
Trigger: GATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC...ACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCTGGCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp GTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCTCTCTGGAGTCTAAAGGCTaGGTGTCTTTCTCTATACAT +
Preference number: 5 (lower is better)
Translates to: VLTEMLHITNSIFLGHLSLESKG*VSFSIH
Trigger: ATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAG...AGAGAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp ATAAACTGGGATCAGTGCCAGCCTTGTCTGCTGCTTTTCAATCCCGACTCTTCCCTGGAGTCTAAAGGCTaGGTGTCTTTCTCTATACAT +
Preference number: 5 (lower is better)
Translates to: INWDQCQPCLLLFNPDSSLESKG*VSFSIH
Trigger: ATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAG...GGAAGAGTCGGGATTGAAAAGCAGCAGACAAGGCTGGCACTGATCCCAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS GCA 90 bp CAAAGTTGGTTTCTTCTGAAGGCTATGAGGGAAGCATCCATTCCATaGTTCTCTCCTTGGCTCGTAGATGGCCATCTTTATGTTCACATG +
Preference number: 5 (lower is better)
Translates to: QSWFLLKAMREASIP*FSPWLVDGHLYVHM
Trigger: CATGTGAACATAAAGATGGCCATCTACGAGCCAAGGAGAGAAGCATGGAATGGATGCTTCCCTCATAGCCTTCAGAAGAAACCAACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS-3UTR CAA 90 bp AGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAAGTGATCATCACTTCTaGGGCTCTGTGGACGTTTCA +
Preference number: 5 (lower is better)
Translates to: RETLCKDFIQNHKPCELGSDHHF*GSVDVS
Trigger: TGAAACGTCCACAGAGCCCAAGAAGTGATGATCACT...TCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCACTGCTAGCATCCCTGTaGTTAACAAACTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: SYRMAPNPLGASSFNAIALLASL*LTNWPV
Trigger: GACTGGCCAGTTTGTTAACAACAGGGATGCTAGCAG...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGACATGTGAGCCTGGGATaGCCAGATTGGAAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: PSASGLNKTSAYDFSEVRHVSLG*PDWKGG
Trigger: TCCCCCTTTCCAATCTGGCAATCCCAGGCTCACATG...TCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTATCCTGGCGAGGCGTTaGATAGCTTGGGTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: LLLSREGPTEFDIIPENPILARR*IAWVWS
Trigger: TGACCAAACCCAAGCTATCAAACGCCTCGCCAGGAT...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AAAGTTCTCACCGAAATGTTGCACATCACCAACTCCATCTTCCTTGGGCACCTCAAGAAGAGGATTAGTTaGCGCACACTTGTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: KVLTEMLHITNSIFLGHLKKRIS*RTLVVF
Trigger: AAACACCACAAGTGTGCGCAAACTAATCCTCTTCTT...GAGGTGCCCAAGGAAGATGGAGTTGGTGATGTGCAACATTTCGGTGAGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp AGGGAAACCCTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTTCTCACCGAAATGTaGCACATCACCAACTCCATC +
Preference number: 5 (lower is better)
Translates to: RETLCKDFIQNHKPCELGVLTEM*HITNSI
Trigger: GATGGAGTTGGTGATGTGCAACATTTCGGTGAGAAC...TCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAGGGTTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAACCTCAGAGCCCCTGGTaGATGTTAGATCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKPQSPW*MLDPPQ
Trigger: CTGGGGTGGATCTAACATCAACCAGGGGCTCTGAGG...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTGAGTCCACATACATGTaGGCAGATTTCTTTGAGCTC +
Preference number: 5 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFESTYM*ADFFEL
Trigger: GAGCTCAAAGAAATCTGCCAACATGTATGTGGACTC...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTTATGCCTCTAGACTGTaGATGGGCTTGCCTCGGCAA +
Preference number: 5 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLYASRL*MGLPRQ
Trigger: TTGCCGAGGCAAGCCCATCAACAGTCTAGAGGCATA...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAATGTGATAAGAGTGTATaGGACATCACTGAACACACG +
Preference number: 5 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQCDKSV*DITEHT
Trigger: CGTGTGTTCAGTGATGTCCAATACACTCTTATCACA...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TGCTATCATTTCTATTCACTTCCTCTTGGCATAACAAGTCTGTTTAGCATGTACTTTGATAGCTTGGGTTaGGTCAGGCCCCACTGGGGA +
Preference number: 5 (lower is better)
Translates to: CYHFYSLPLGITSLFSMYFDSLG*VRPHWG
Trigger: TCCCCAGTGGGGCCTGACCAAACCCAAGCTATCAAA...GTACATGCTAAACAGACTTGTTATGCCAAGAGGAAGTGAATAGAAATGATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CCCAATATGTATGATGGAGTAAGAACTTGTAAATATGTACTGAAAACCTCTGACGCACACTTGTGGTGTTaGCCCAGGGCGCTGGAATCT +
Preference number: 5 (lower is better)
Translates to: PNMYDGVRTCKYVLKTSDAHLWC*PRALES
Trigger: AGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGC...GTCAGAGGTTTTCAGTACATATTTACAAGTTCTTACTCCATCATACATATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TCAGCTACTCTGCTGGAGTCTAAAGGCTTGGTGTCTTTCTCTATACATCCCATCAAGAAGAGGATTAGTTaGCGCACACTTGTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: SATLLESKGLVSFSIHPIKKRIS*RTLVVF
Trigger: AAACACCACAAGTGTGCGCAAACTAATCCTCTTCTT...GATGGGATGTATAGAGAAAGACACCAAGCCTTTAGACTCCAGCAGAGTAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CCCAATATGTATGATGGAGTAAGAACTTGTAAATATGTACTGAAAACCTCTGACCTCCACACCAGCTGCTaGGGTCTTCCCATCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PNMYDGVRTCKYVLKTSDLHTSC*GLPILQ
Trigger: CTGAAGGATGGGAAGACCCAAGCAGCTGGTGTGGAG...GTCAGAGGTTTTCAGTACATATTTACAAGTTCTTACTCCATCATACATATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CTTTGCAAAGATTTCATCCAGAACCACAAACCCTGTGAATTGGGAGTAGTCGTACACAAACCCTGTGAATaGGGAGTAGTCGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: LCKDFIQNHKPCELGVVVHKPCE*GVVVLE
Trigger: CTCCAATACGACTACTCCCAATTCACAGGGTTTGTG...TACGACTACTCCCAATTCACAGGGTTTGTGGTTCTGGATGAAATCTTTGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp GAATCTCAAAGGATAAACTGGGATCAGTGCCAGCCTTGTCTGCTGCTTTTCAATGCCTATTTATTCTGTTaGAGTGCCAGGGAAACCCTT +
Preference number: 5 (lower is better)
Translates to: ESQRINWDQCQPCLLLFNAYLFC*SARETL
Trigger: AAGGGTTTCCCTGGCACTCAAACAGAATAAATAGGC...ATTGAAAAGCAGCAGACAAGGCTGGCACTGATCCCAGTTTATCCTTTGAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477665.2
CDS-3UTR CAA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAAGAGAGACCTGGTGCTaGGCTCTTTTCCCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKRETWC*ALFPLR
Trigger: TCTGAGGGGGAAAAGAGCCAAGCACCAGGTCTCTCT...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CTTCGTTCATGGGCATGGCTTGGTAGTGACTTCTCAGATCTAGACCACATCCACGCTTTTGTGTCATGCTaGATGACATTTATCATGCAA +
Preference number: 5 (lower is better)
Translates to: LRSWAWLGSDFSDLDHIHAFVSC*MTFIMQ
Trigger: TTGCATGATAAATGTCATCAAGCATGACACAAAAGC...GTGGATGTGGTCTAGATCTGAGAAGTCACTACCAAGCCATGCCCATGAACGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGTCCGTGCATGCAACCTaGGTACAGTTTTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: PYDWGANQPRFANQSALKSVHAT*VQFSGL
Trigger: AAGCCCAGAAAACTGTACCAAGGTTGCATGCACGGA...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTGTGCAGACTTTCAAATaGCAAGCAAGGCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLVQTFK*QARLAA
Trigger: AGCTGCCAGCCTTGCTTGCAATTTGAAAGTCTGCAC...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAAGATATGGTGGCCTGCTAGCATCCCTGTaGTTAACAAACTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: SGLNKTSAYDFSEVRYGGLLASL*LTNWPV
Trigger: GACTGGCCAGTTTGTTAACAACAGGGATGCTAGCAG...GCCACCATATCTTACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TCTTCCCATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTCACAAACCCTGTGAATaGGGAGTAGTCGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: SSHPSASGLNKTSAYDFSHKPCE*GVVVLE
Trigger: CTCCAATACGACTACTCCCAATTCACAGGGTTTGTG...ACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp TACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTTCCTCCTTTAATGCCATaGCAGTTTCCCATGCATCCT +
Preference number: 5 (lower is better)
Translates to: YSYPEKALQNLTLSQKTLPPLMP*QFPMHP
Trigger: AGGATGCATGGGAAACTGCAATGGCATTAAAGGAGG...AAGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGAACAGTCAGCAGCCCTaGGGTGTTACTGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: FGKNAINSPVILSKWPCENSQQP*GVTGIL
Trigger: CAGGATGCCAGTAACACCCAAGGGCTGCTGACTGTT...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TTTTACAGAACGTATAGGGTGGAAGACCAAGAGTTGGGGGTGTGGATGTGCTTTATGATTGGATGTAGGTaGAGGGGTAGAATAATGCAT +
Preference number: 5 (lower is better)
Translates to: FYRTYRVEDQELGVWMCFMIGCR*RGRIMH
Trigger: ATGCATTATTCTACCCCTCAACCTACATCCAATCAT...AAAGCACATCCACACCCCCAACTCTTGGTCTTCCACCCTATACGTTCTGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGGTGCTGTGCTTCTTGTaGGGCTTAATGTTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: PYDWGANQPRFANQSALKVLCFL*GLMFVS
Trigger: GCTCACAAACATTAAGCCCAACAAGAAGCACAGCAC...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AACGCAATTCCAAGATCAGGCTTGAAGACCCCACTCCAAAGAGGACTTTGCCAACACGTATCATCTGAATaGACCAAGACTTATTTTCAC +
Preference number: 5 (lower is better)
Translates to: NAIPRSGLKTPLQRGLCQHVSSE*TKTYFH
Trigger: GTGAAAATAAGTCTTGGTCAATTCAGATGATACGTG...TTGGCAAAGTCCTCTTTGGAGTGGGGTCTTCAAGCCTGATCTTGGAATTGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CCCAATATGTATGATGGAGTAAGAACTTGTAAATATGTACTGAAAACCTCTGACATCCTGGCGAGGCGTTaGATAGCTTGGGTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: PNMYDGVRTCKYVLKTSDILARR*IAWVWS
Trigger: TGACCAAACCCAAGCTATCAAACGCCTCGCCAGGAT...GTCAGAGGTTTTCAGTACATATTTACAAGTTCTTACTCCATCATACATATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGATGCATATCTATCTCTaGTTGGGCCCCACGCTAAAA +
Preference number: 5 (lower is better)
Translates to: PYDWGANQPRFANQSALKMHIYL*LGPTLK
Trigger: TTTTAGCGTGGGGCCCAACAAGAGATAGATATGCAT...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGACAGTAATTCTCCTCTaGCCTCCTTATCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRTVILL*PPYLFA
Trigger: GGCAAAGAGATAAGGAGGCAAGAGGAGAATTACTGT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAAAAGTGCTGTGCTTCTaGTTGGGCTTAATGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAKVLCF*LGLMFV
Trigger: CACAAACATTAAGCCCAACAAGAAGCACAGCACTTT...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CATCCTTCAGCATCTGGACTAAATAAAACCTCAGCATATGACTTCAGTGAAGTAGCCTATTTATTCTGTTaGAGTGCCAGGGAAACCCTT +
Preference number: 5 (lower is better)
Translates to: HPSASGLNKTSAYDFSEVAYLFC*SARETL
Trigger: AAGGGTTTCCCTGGCACTCAAACAGAATAAATAGGC...TACTTCACTGAAGTCATATGCTGAGGTTTTATTTAGTCCAGATGCTGAAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393934.7
ENST00000477665.2
CDS-3UTR CAA 90 bp AAGCAACTTTTTCTTGAGGCAGAGATTCTGCTGATGCAAAGGTGTTTATCAAGGATCCCCGAGGTAGTCTaGTTTTCAAGGAGTTATAGA +
Preference number: 5 (lower is better)
Translates to: KQLFLEAEILLMQRCLSRIPEVV*FSRSYR
Trigger: TCTATAACTCCTTGAAAACAAGACTACCTCGGGGAT...CCTTGATAAACACCTTTGCATCAGCAGAATCTCTGCCTCAAGAAAAAGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TTACTCTTATCCAGAGAAGGCCCTACAGAATTTGACATTATCCCAGAAAACCCTCAGGGATTTCAGAGCTaGTCATTAGCATTTAGCATC +
Preference number: 5 (lower is better)
Translates to: LLLSREGPTEFDIIPENPQGFQS*SLAFSI
Trigger: GATGCTAAATGCTAATGACAAGCTCTGAAATCCCTG...AGGGTTTTCTGGGATAATGTCAAATTCTGTAGGGCCTTCTCTGGATAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAACCGAACTAAAACCTTaGATGGTCCCCTTTGCCACA +
Preference number: 5 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKTELKP*MVPFAT
Trigger: TGTGGCAAAGGGGACCATCAAAGGTTTTAGTTCGGT...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CTAAATCTGCAGGATGGACTGGTTTCATGTAGCTCTTTTACTTCCCAGGAAGAAACCTGGGCTCAGATTTaGTGCTTTTCTTTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: LNLQDGLVSCSSFTSQEETWAQI*CFSLSL
Trigger: TAAACTCAAAGAAAAGCACAAAATCTGAGCCCAGGT...TTCTTCCTGGGAAGTAAAAGAGCTACATGAAACCAGTCCATCCTGCAGATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp AGTTATAGAATGGCTCCAAATCCACTTGGAGCTTCCTCCTTTAATGCCATTGCAAAGCCAGGTCTTAAATaGTTTTACAGAACGTATAGG +
Preference number: 5 (lower is better)
Translates to: SYRMAPNPLGASSFNAIAKPGLK*FYRTYR
Trigger: CCTATACGTTCTGTAAAACAATTTAAGACCTGGCTT...TGCAATGGCATTAAAGGAGGAAGCTCCAAGTGGATTTGGAGCCATTCTATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TCTCTAAAAGGCTCAAAGTTCAAGCCTGTAAACACTACTCTAACCGAACTAAAAGGTAGTAATGTCTCATaGGGAAGCACTTTCTCATGG +
Preference number: 5 (lower is better)
Translates to: SLKGSKFKPVNTTLTELKGSNVS*GSTFSW
Trigger: CCATGAGAAAGTGCTTCCCAATGAGACATTACTACC...TTTTAGTTCGGTTAGAGTAGTGTTTACAGGCTTGAACTTTGAGCCTTTTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp CCTTATGATTGGGGAGCTAATCAACCAAGATTTGCAAATCAGTCAGCACTAAAGAGGGTTATAGTGCTATaGGAGTCCTTGTTTCTAGAA +
Preference number: 5 (lower is better)
Translates to: PYDWGANQPRFANQSALKRVIVL*ESLFLE
Trigger: TTCTAGAAACAAGGACTCCAATAGCACTATAACCCT...CTTTAGTGCTGACTGATTTGCAAATCTTGGTTGATTAGCTCCCCAATCATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS-3UTR CAA 90 bp TTTGGGAAAAATGCAATTAATAGCCCTGTAATTTTATCTAAATGGCCCTGTGAGTATCTCCCAGAACTCTaGTGCAGACTTTCAAATTGC +
Preference number: 5 (lower is better)
Translates to: FGKNAINSPVILSKWPCEYLPEL*CRLSNC
Trigger: GCAATTTGAAAGTCTGCACAAGAGTTCTGGGAGATA...CTCACAGGGCCATTTAGATAAAATTACAGGGCTATTAATTGCATTTTTCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS GCA 72 bp CACTCACAAGACAGGTGCCCACCCAGTGTACAGACATaGCTGCGGGTCCATACACAGGTGCGCGCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: HSQDRCPPSVQT*LRVHTQVRARA
Trigger: CGCCCGGGCGCGCACCTGTGTATGGACCCGCAGGCATGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 72 bp CCAGTGTACAGACATGCCTGCGGGTCCATACACAGGTaGGCGCCCGGGCGCGCCGGCTCTAGCCTGATTTAT +
Preference number: 6 (lower is better)
Translates to: PVYRHACGSIHR*APGRAGSSLIY
Trigger: ATAAATCAGGCTAGAGCCGGCGCGCCCGGGCGCGCACCTGTGTATGGACCCGCAGGCATGTCTGTACACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 72 bp AGGAGCAGCCACACCCGGAGCCACTCACAAGACAGGTaGCCACCCAGTGTACAGACATGCCTGCGGGTCCAT +
Preference number: 6 (lower is better)
Translates to: RSSHTRSHSQDR*PPSVQTCLRVH
Trigger: ATGGACCCGCAGGCATGTCTGTACACTGGGTGGGCACCTGTCTTGTGAGTGGCTCCGGGTGTGGCTGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS TCA 72 bp GAGCGAGGCCATCCAGTCGGCATTGCAGACCTCCGATaGTGTCTTTGTCCCGCTGGGGTTGGGGGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: ERGHPVGIADLR*CLCPAGVGGAD
Trigger: ATCTGCTCCCCCAACCCCAGCGGGACAAAGACATCATCGGAGGTCTGCAATGCCGACTGGATGGCCTCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS TCA 72 bp GGTGAGGATCGCTTGGGAGACATGGAAGGAGCCCCGTaGGGCCCGCTCACTCAGAGTGGTCTCCAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: GEDRLGDMEGAP*GPLTQSGLQEE
Trigger: CTCTTCTTGGAGACCACTCTGAGTGAGCGGGCCTCACGGGGCTCCTTCCATGTCTCCCAAGCGATCCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 72 bp ATATGTCACTGGGCTGGTACACAAGCTGGGCCTGCCTaGTACTCACTCCCCCGCTTCTCTGCACAGACGCCC +
Preference number: 6 (lower is better)
Translates to: ICHWAGTQAGPA*YSLPRFSAQTP
Trigger: GGGCGTCTGTGCAGAGAAGCGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTGTGTACCAGCCCAGTGACATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS TCA 72 bp CTGGGATCAGTGCCAGCCTATGAACCAGCGTGTTCTTaGGGCCCCCAACCAAGCCCCGGGCAATGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: LGSVPAYEPACS*GPQPSPGQWSS
Trigger: TGAAGACCATTGCCCGGGGCTTGGTTGGGGGCCTCAAGAACACGCTGGTTCATAGGCTGGCACTGATCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393934.7
CDS CCA 72 bp CAGCCCAGTGCCACTCACTCAGTGATCATCACTTCTTaGGCTCTGTGGACGTTTCAGGGCGACGCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: QPSATHSVIITS*ALWTFQGDACH
Trigger: GTGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCACTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 90 bp AGTGATCATCACTTCTTGGGCTCTGTGGACGTTTCAGGGCGACGCTaGCCACGCCAGTCTTTCCAAAATGCCTTTCTGGCTGGGGGACGG +
Preference number: 6 (lower is better)
Translates to: SDHHFLGSVDVSGRR*PRQSFQNAFLAGGR
Trigger: CCGTCCCCCAGCCAGAAAGGCATTTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGTGATGATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS TCA 72 bp TACACAGGTGCGCGCCCGGGCGCGCCGGCTCTAGCCTaGTTTATGTTTCTATATATGTCACTGGGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: YTGARPGAPALA*FMFLYMSLGWY
Trigger: GTACCAGCCCAGTGACATATATAGAAACATAAATCAGGCTAGAGCCGGCGCGCCCGGGCGCGCACCTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS TCA 72 bp GGATGGCAGGAAGATTCCTATGAACCAGCGTGTTCTTaGGGCCCCCAACCAAGCCCCGGGCAATGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: GWQEDSYEPACS*GPQPSPGQWSS
Trigger: TGAAGACCATTGCCCGGGGCTTGGTTGGGGGCCTCAAGAACACGCTGGTTCATAGGAATCTTCCTGCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS GCA 72 bp CTATATATGTCACTGGGCTGGTACACAAGCTGGGCCTaGCTGCTACTCACTCCCCCGCTTCTCTGCACAGAC +
Preference number: 6 (lower is better)
Translates to: LYMSLGWYTSWA*LLLTPPLLCTD
Trigger: GTCTGTGCAGAGAAGCGGGGGAGTGAGTAGCAGGCAGGCCCAGCTTGTGTACCAGCCCAGTGACATATATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 72 bp GCCACTCACTCAGTGATCATCACTTCTTGGGCTCTGTaGACGTTTCAGGGCGACGCTTGCCACGCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: ATHSVIITSWAL*TFQGDACHASL
Trigger: AAGACTGGCGTGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGTGATGATCACTGAGTGAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 72 bp CAGAGTTCGCAGCGTCAAACTTTCCACACTGCAGGCTaGGCACAGCTTGTTTCCAAAGGCCTCCTGGATCCG +
Preference number: 6 (lower is better)
Translates to: QSSQRQTFHTAG*AQLVSKGLLDP
Trigger: CGGATCCAGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGACGCTGCGAACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 72 bp CATGGAAGGAGCCCCGTGAGGCCCGCTCACTCAGAGTaGTCTCCAAGAAGAGGATTAGTTTGCGCACACTTG +
Preference number: 6 (lower is better)
Translates to: HGRSPVRPAHSE*SPRRGLVCAHL
Trigger: CAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTCTGAGTGAGCGGGCCTCACGGGGCTCCTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 72 bp TCAGCCCAGTGCCACTCACTCAGTGATCATCACTTCTaGGGCTCTGTGGACGTTTCAGGGCGACGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: SAQCHSLSDHHF*GSVDVSGRRLP
Trigger: TGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCACTGGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 72 bp AGCGTCAAACTTTCCACACTGCAGGCTGGGCACAGCTaGTTTCCAAAGGCCTCCTGGATCCGCAGAACCAGG +
Preference number: 6 (lower is better)
Translates to: SVKLSTLQAGHS*FPKASWIRRTR
Trigger: CCTGGTTCTGCGGATCCAGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 72 bp ACTTCTTGGGCTCTGTGGACGTTTCAGGGCGACGCTTaGCACGCCAGTCTTTCCAAAATGCCTTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: TSWALWTFQGDA*HASLSKMPFWL
Trigger: CAGCCAGAAAGGCATTTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 72 bp TCTCCCACAGAGTTCGCAGCGTCAAACTTTCCACACTaGAGGCTGGGCACAGCTTGTTTCCAAAGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: SPTEFAASNFPH*RLGTACFQRPP
Trigger: AGGAGGCCTTTGGAAACAAGCTGTGCCCAGCCTGCAGTGTGGAAAGTTTGACGCTGCGAACTCTGTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 72 bp CACTTCTTGGGCTCTGTGGACGTTTCAGGGCGACGCTaGCCACGCCAGTCTTTCCAAAATGCCTTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: HFLGSVDVSGRR*PRQSFQNAFLA
Trigger: AGCCAGAAAGGCATTTTGGAAAGACTGGCGTGGCAAGCGTCGCCCTGAAACGTCCACAGAGCCCAAGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 72 bp ATTAGCTTCTTCACCAAGGAGATCCTGGCGAGGCGTTaGATAGCTTGGGTTTGGTCAGGCCCCACTGGGGAC +
Preference number: 6 (lower is better)
Translates to: ISFFTKEILARR*IAWVWSGPTGD
Trigger: GTCCCCAGTGGGGCCTGACCAAACCCAAGCTATCAAACGCCTCGCCAGGATCTCCTTGGTGAAGAAGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393934.7
ENST00000468174.1
ENST00000477665.2
ENST00000636933.1
CDS CAA 72 bp GCCAGAGCTGTGTCCTCCTGTAGGAGGTCATTCAACTaGATGACAGTCGCAGCAAAGTCCACCAGGTCCACG +
Preference number: 6 (lower is better)
Translates to: ARAVSSCRRSFN*MTVAAKSTRST
Trigger: CGTGGACCTGGTGGACTTTGCTGCGACTGTCATCAAGTTGAATGACCTCCTACAGGAGGACACAGCTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS CAA 90 bp GAGTGGTCTCCAAGAAGAGGATTAGTTTGCGCACACTTGTGGTGTTaGCCCAGGGCGCTGGAATCTTCTTTCCTGGCCACAGGAAGGGGT +
Preference number: 6 (lower is better)
Translates to: EWSPRRGLVCAHLWC*PRALESSFLATGRG
Trigger: ACCCCTTCCTGTGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 90 bp CGTGAGGCCCGCTCACTCAGAGTGGTCTCCAAGAAGAGGATTAGTTaGCGCACACTTGTGGTGTTTGCCCAGGGCGCTGGAATCTTCTTT +
Preference number: 6 (lower is better)
Translates to: REARSLRVVSKKRIS*RTLVVFAQGAGIFF
Trigger: AAAGAAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTCTGAGTGAGCGGGCCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CCA 72 bp CCCATGGATGAAGTAGATCTCCTGGTCGGCATCCCCTaGTTTGGAAGACACACGCAGGTCAAAGTAGCGGAT +
Preference number: 6 (lower is better)
Translates to: PMDEVDLLVGIP*FGRHTQVKVAD
Trigger: ATCCGCTACTTTGACCTGCGTGTGTCTTCCAAACCAGGGGATGCCGACCAGGAGATCTACTTCATCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393934.7
ENST00000468174.1
ENST00000477665.2
ENST00000636933.1
CDS CAA 90 bp GCTCACTCAGAGTGGTCTCCAAGAAGAGGATTAGTTTGCGCACACTaGTGGTGTTTGCCCAGGGCGCTGGAATCTTCTTTCCTGGCCACA +
Preference number: 6 (lower is better)
Translates to: AHSEWSPRRGLVCAH*WCLPRALESSFLAT
Trigger: TGTGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTCTGAGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 72 bp CCAAGAAGAGGATTAGTTTGCGCACACTTGTGGTGTTaGCCCAGGGCGCTGGAATCTTCTTTCCTGGCCACA +
Preference number: 6 (lower is better)
Translates to: PRRGLVCAHLWC*PRALESSFLAT
Trigger: TGTGGCCAGGAAAGAAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 90 bp CAGCATTTAGCCAGAGCTGTGTCCTCCTGTAGGAGGTCATTCAACTaGATGACAGTCGCAGCAAAGTCCACCAGGTCCACGAAGTCAGAT +
Preference number: 6 (lower is better)
Translates to: QHLARAVSSCRRSFN*MTVAAKSTRSTKSD
Trigger: ATCTGACTTCGTGGACCTGGTGGACTTTGCTGCGACTGTCATCAAGTTGAATGACCTCCTACAGGAGGACACAGCTCTGGCTAAATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636933.1
CDS GCA 72 bp TCCCTGTTGTTAACAAACTGGCCAGTCTCAGCCCAGTaGCACTCACTCAGTGATCATCACTTCTTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SLLLTNWPVSAQ*HSLSDHHFLGS
Trigger: AGAGCCCAAGAAGTGATGATCACTGAGTGAGTGGCACTGGGCTGAGACTGGCCAGTTTGTTAACAACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS CAA 72 bp GAGTGGTCTCCAAGAAGAGGATTAGTTTGCGCACACTaGTGGTGTTTGCCCAGGGCGCTGGAATCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: EWSPRRGLVCAH*WCLPRALESSF
Trigger: GAAAGAAGATTCCAGCGCCCTGGGCAAACACCACAAGTGTGCGCAAACTAATCCTCTTCTTGGAGACCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393934.7
ENST00000477665.2
ENST00000636933.1
CDS GCA 72 bp AATTCCACAGCTGAGCCTGAATCCCAGTGCTGGTTCTaGTGTGATTACTTCTGTGAACCTGGGCTTCCAAAC +
Preference number: 6 (lower is better)
Translates to: NSTAEPESQCWF*CDYFCEPGLPN
Trigger: GTTTGGAAGCCCAGGTTCACAGAAGTAATCACAGCAGAACCAGCACTGGGATTCAGGCTCAGCTGTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468174.1
CDS GCA 72 bp ACAGTCTGTAATTCCACAGCTGAGCCTGAATCCCAGTaGTGGTTCTGCTGTGATTACTTCTGTGAACCTGGG +
Preference number: 6 (lower is better)
Translates to: TVCNSTAEPESQ*WFCCDYFCEPG
Trigger: CCCAGGTTCACAGAAGTAATCACAGCAGAACCAGCACTGGGATTCAGGCTCAGCTGTGGAATTACAGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468174.1
CDS CCA 72 bp GCTATGAGGGAAGCATCCATTCCATGCTTCTCTCCTTaGCTCGTAGATGGCCATCTTTATGTTCACATGGTG +
Preference number: 6 (lower is better)
Translates to: AMREASIPCFSP*LVDGHLYVHMV
Trigger: CACCATGTGAACATAAAGATGGCCATCTACGAGCCAAGGAGAGAAGCATGGAATGGATGCTTCCCTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS CAA 72 bp TGGTGTTCTCTTCATGTGCTTGTGTCCACATTTCCCTaGTCTGCTGCTTTTCAATCCCGACTCTTCCCTCAG +
Preference number: 6 (lower is better)
Translates to: WCSLHVLVSTFP*SAAFQSRLFPQ
Trigger: CTGAGGGAAGAGTCGGGATTGAAAAGCAGCAGACAAGGGAAATGTGGACACAAGCACATGAAGAGAACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS CAA 90 bp CGTAGATGGCCATCTTTATGTTCACATGGTGTTCTCTTCATGTGCTaGTGTCCACATTTCCCTTGTCTGCTGCTTTTCAATCCCGACTCT +
Preference number: 6 (lower is better)
Translates to: RRWPSLCSHGVLFMC*CPHFPCLLLFNPDS
Trigger: AGAGTCGGGATTGAAAAGCAGCAGACAAGGGAAATGTGGACACAAGCACATGAAGAGAACACCATGTGAACATAAAGATGGCCATCTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS GCA 72 bp TTTCTTCTGAAGGCTATGAGGGAAGCATCCATTCCATaGTTCTCTCCTTGGCTCGTAGATGGCCATCTTTAT +
Preference number: 6 (lower is better)
Translates to: FLLKAMREASIP*FSPWLVDGHLY
Trigger: ATAAAGATGGCCATCTACGAGCCAAGGAGAGAAGCATGGAATGGATGCTTCCCTCATAGCCTTCAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS CAA 72 bp CCATCTTTATGTTCACATGGTGTTCTCTTCATGTGCTaGTGTCCACATTTCCCTTGTCTGCTGCTTTTCAAT +
Preference number: 6 (lower is better)
Translates to: PSLCSHGVLFMC*CPHFPCLLLFN
Trigger: ATTGAAAAGCAGCAGACAAGGGAAATGTGGACACAAGCACATGAAGAGAACACCATGTGAACATAAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474484.1
CDS CAA 72 bp TGCTGTGATTACTTCTGTGAACCTGGGCTTCCAAACTaGTACTTGGAATTCTGTTTCTTCATTTGCAAACTT +
Preference number: 6 (lower is better)
Translates to: CCDYFCEPGLPN*YLEFCFFICKL
Trigger: AAGTTTGCAAATGAAGAAACAGAATTCCAAGTACAAGTTTGGAAGCCCAGGTTCACAGAAGTAATCACAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468174.1