RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000154822

Ensembl transcript IDs: ENST00000419842.1, ENST00000432376.5, ENST00000460467.1, ENST00000615277.5, ENST00000638327.1, ENST00000638466.2, ENST00000639559.1, ENST00000639988.1

Found 674 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCTGACTCGGCATGTATCTTCAGCCAGGGAGCTTCAGTCCAATTaGACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGG +
Preference number: 1 (lower is better)
Translates to: VLTRHVSSARELQSN*TFSSMALQGPRGFR
Trigger: CCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTGAAGATACATGCCGAGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR TCA 90 bp TCCCCTGCCCTCTGCCACCTGTGTAATGGCCACATGCTTGGATGTTaGAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCA +
Preference number: 1 (lower is better)
Translates to: SPALCHLCNGHMLGC*RQQRLAPSIPWGPA
Trigger: TGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCATTACACAGGTGGCAGAGGGCAGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
3UTR CCA 90 bp TATCTTCAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATaGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTAC +
Preference number: 1 (lower is better)
Translates to: YLQPGSFSPIAHSPR*LSKDPGDSGNPSTY
Trigger: GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTGAAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR TCA 90 bp ATTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTaGCTCGGCATGTATCTTCAGCCAGGGAGCTTCAGTCCAATTGCA +
Preference number: 1 (lower is better)
Translates to: IVSRLAAFTSSLPMC*LGMYLQPGSFSPIA
Trigger: TGCAATTGGACTGAAGCTCCCTGGCTGAAGATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR GCA 90 bp ACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAACCCAGAGACTCTGGCAACCCCATA +
Preference number: 1 (lower is better)
Translates to: TRPLTFSLVIMAQQA*HQNHLEPRDSGNPI
Trigger: TATGGGGTTGCCAGAGTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR GCA 90 bp TCATACAATGAAAAACTATTTACAATGTATTGTTTCCAGATTGGCTaGTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCT +
Preference number: 1 (lower is better)
Translates to: SYNEKLFTMYCFQIG*FYIISTHVLTRHVS
Trigger: AGATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAATACATTGTAAATAGTTTTTCATTGTATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR CAA 90 bp TGTGCTGACTCGGCATGTATCTTCAGCCAGGGAGCTTCAGTCCAATaGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAG +
Preference number: 2 (lower is better)
Translates to: CADSACIFSQGASVQ*HILLDGSPRTPGIQ
Trigger: CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTGAAGATACATGCCGAGTCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR CCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACAGAACCCAGAGACTCTaGCAACCCCATATAAGTAAA +
Preference number: 2 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYRTQRL*QPHISK
Trigger: TTTACTTATATGGGGTTGCCAGAGTCTCTGGGTTCT...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR CCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGCACATTCTCCTCGATaGCTCTCCAAGGACCCCGGG +
Preference number: 2 (lower is better)
Translates to: PDWLLLHHLYPCADSACIAHSPR*LSKDPG
Trigger: CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAA +
Preference number: 2 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIMAQQA*HQNHLE
Trigger: TTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCAT...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCATTAGTGAGTaGAAAGCAAATGTCCCATCT +
Preference number: 2 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYILISE*KANVPS
Trigger: AGATGGGACATTTGCTTTGCACTCACTAATGAGAAT...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGATTCTCATTAGTGAGTaGAAAGCAAATGTCCCATCT +
Preference number: 2 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGILISE*KANVPS
Trigger: AGATGGGACATTTGCTTTGCACTCACTAATGAGAAT...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAA +
Preference number: 2 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDMAQQA*HQNHLE
Trigger: TTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCAT...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAA +
Preference number: 2 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSMAQQA*HQNHLE
Trigger: TTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCAT...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR CCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAAGAACCCAGAGACTCTaGCAACCCCATATAAGTAAA +
Preference number: 2 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSRTQRL*QPHISK
Trigger: TTTACTTATATGGGGTTGCCAGAGTCTCTGGGTTCT...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR TCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATAGCAAATGTCCCATCTaGCTACAATTGGTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNSKCPI*LQLVLE
Trigger: CTCTAGGACCAATTGTAGTCAGATGGGACATTTGCT...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR TCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTAGCAAATGTCCCATCTaGCTACAATTGGTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVISKCPI*LQLVLE
Trigger: CTCTAGGACCAATTGTAGTCAGATGGGACATTTGCT...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTCAGTGGAGCTAGAGTaGATAATCTTTCTTCATACT +
Preference number: 2 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQSVELE*IIFLHT
Trigger: AGTATGAAGAAAGATTATTCACTCTAGCTCCACTGA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAGAGCTTCAGTCCAATTaGACATTCTCCTCGATGGCT +
Preference number: 2 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAELQSN*TFSSMA
Trigger: AGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTC...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATGTTAAAGAGTTTATTTaGCTTCACACGCAGGATTGC +
Preference number: 2 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNVKEFI*LHTQDC
Trigger: GCAATCCTGCGTGTGAAGGCAAATAAACTCTTTAAC...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR TCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAAGCAAATGTCCCATCTaGCTACAATTGGTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: NPSTYILFSNYGSASMPPSKCPI*LQLVLE
Trigger: CTCTAGGACCAATTGTAGTCAGATGGGACATTTGCT...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATATTCTCATTAGTGAGTaGAAAGCAAATGTCCCATCT +
Preference number: 2 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHILISE*KANVPS
Trigger: AGATGGGACATTTGCTTTGCACTCACTAATGAGAAT...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGCAAATGTCCCATCTaGCTACAATTGGTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRSKCPI*LQLVLE
Trigger: CTCTAGGACCAATTGTAGTCAGATGGGACATTTGCT...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR GCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTATTCTCATTAGTGAGTaGAAAGCAAATGTCCCATCT +
Preference number: 2 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIILISE*KANVPS
Trigger: AGATGGGACATTTGCTTTGCACTCACTAATGAGAAT...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR CCA 72 bp CCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATaGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCG +
Preference number: 3 (lower is better)
Translates to: PGSFSPIAHSPR*LSKDPGDSGNP
Trigger: CGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR GCA 72 bp CGGCATGTATCTTCAGCCAGGGAGCTTCAGTCCAATTaGACATTCTCCTCGATGGCTCTCCAAGGACCCCGG +
Preference number: 3 (lower is better)
Translates to: RHVSSARELQSN*TFSSMALQGPR
Trigger: CCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTGAAGATACATGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR-3UTR CAA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCCCACATGCTTGGATGTaGAAGACAGCAAAGATTAGC +
Preference number: 3 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPPHAWM*KTAKIS
Trigger: GCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
3UTR TCA 72 bp CTCTGCCACCTGTGTAATGGCCACATGCTTGGATGTTaGAGACAGCAAAGATTAGCACCTTCCATTCCCTGG +
Preference number: 3 (lower is better)
Translates to: LCHLCNGHMLGC*RQQRLAPSIPW
Trigger: CCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCATTACACAGGTGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
3UTR-3UTR CAA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGGAGCTTCAGTCCAATaGCACATTCTCCTCGATGGC +
Preference number: 3 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHGASVQ*HILLDG
Trigger: GCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR TCA 72 bp CAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTaGGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCC +
Preference number: 3 (lower is better)
Translates to: QLSIREKQLSYF*GEGSSAAAKTS
Trigger: GGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
3UTR GCA 72 bp CTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAACCCAGAGACTCTGGC +
Preference number: 3 (lower is better)
Translates to: LTFSLVIMAQQA*HQNHLEPRDSG
Trigger: GCCAGAGTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR GCA 72 bp GAAAAACTATTTACAATGTATTGTTTCCAGATTGGCTaGTTTTACATCATCTCTACCCATGTGCTGACTCGG +
Preference number: 3 (lower is better)
Translates to: EKLFTMYCFQIG*FYIISTHVLTR
Trigger: CCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAATACATTGTAAATAGTTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGCAGGCCGCCCGGCTTaGTCTCCCGGGGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGAGRPA*SPGGGY
Trigger: GTACCCTCCCCCGGGAGAGCAAGCCGGGCGGCCTGC...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACTACAGACGACCGCGCTaGGGGTCGGGGCGAGCGCAA +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYYRRPR*GSGRAQ
Trigger: TTGCGCTCGCCCCGACCCCCAGCGCGGTCGTCTGTA...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR GCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTGCCCCGCGACCCGCCTaGACAAAGCCGCGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLAPRPA*TKPRPR
Trigger: GCGAGGACGCGGCTTTGTGCAGGCGGGTCGCGGGGC...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR TCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTGTCTTCCCTGCCCGGTaGTGGAGCACGTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIVFPAR*WSTSQG
Trigger: CCCCTGTGACGTGCTCCATCACCGGGCAGGGAAGAC...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTACAGACGACCGCGCTaGGGGTCGGGGCGAGCGCAA +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLYRRPR*GSGRAQ
Trigger: TTGCGCTCGCCCCGACCCCCAGCGCGGTCGTCTGTA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACCTCCCTCATGATGGCTaGCCGGAGGACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYLPHDG*PEDIAT
Trigger: TGTGGCTATGTCCTCCGGCCAGCCATCATGAGGGAG...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACGTGAAGAAGTTGAGGTaGGACCCCTGGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYVKKLR*DPWDRV
Trigger: GACTCTGTCCCAGGGGTCTCACCTCAACTTCTTCAC...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTCAGCGGTGTCTTCCCTaGCCGGTGATGGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLQRCLP*PVMEHV
Trigger: GACGTGCTCCATCACCGGGCAGGGAAGACACCGCTG...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACTCCCTCATGATGGCTaGCCGGAGGACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLLPHDG*PEDIAT
Trigger: TGTGGCTATGTCCTCCGGCCAGCCATCATGAGGGAG...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCTGCCGCACCTTCCATTCCCTaGGGGCCAGCAGACACTTTT +
Preference number: 4 (lower is better)
Translates to: TSEVRDPVRQLRLPLPSAAPSIP*GPADTF
Trigger: AAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC...GGCAGAGGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCAAGGCTGTGGAGAGGTaGCAGCGGTGTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPKAVER*QRCLPC
Trigger: GCAGGGAAGACACCGCTGCCACCTCTCCACAGCCTT...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR TCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACCTTTTGTATTGGCGCTaGAGAAGGAGACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYLLYWR*RRRPPP
Trigger: GGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAAG...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTGTGAAGAAGTTGAGGTaGGACCCCTGGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIVKKLR*DPWDRV
Trigger: GACTCTGTCCCAGGGGTCTCACCTCAACTTCTTCAC...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCTGCCGGGGCTGGGCATTCTTaGATACCTCATCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: TSEVRDPVRQLRLPLPSAGAGHS*IPHPRF
Trigger: AAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCC...GGCAGAGGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTGGGGTACTGCTCGCTaGGATTTAGGACCACTAGGG +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLWGTAR*DLGPLG
Trigger: CCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCGTCTTACTTCTGAGGTaGGGGATCCAGTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPVLLLR*GIQCGS
Trigger: GCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGAC...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACACCGCCAACATGCACTaGATGAGATTGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYTANMH*MRLATE
Trigger: CTCTGTGGCCAATCTCATGCAGTGCATGTTGGCGGT...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTATCCGGCACAATTCCCTaGAGCTCCATTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLSGTIP*SSIVGY
Trigger: GTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGA...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTACAGGGGAGCACTGCTaGCTTCTCTCTCGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLTGEHC*LLSRVC
Trigger: GCAGACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGT...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAGCCCCGCGACCCGCCTaGACAAAGCCGCGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVAPRPA*TKPRPR
Trigger: GCGAGGACGCGGCTTTGTGCAGGCGGGTCGCGGGGC...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CCA 90 bp ACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCTGCCTGGCACCTGATCCTTTaGGCTTGGGAAAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSEVRDPVRQLRLPLPSAWHLIL*AWESSA
Trigger: GGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCA...GGCAGAGGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCCGGCGTGGCTTCTaGACATCAGCATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYILRRGF*TSAFSV
Trigger: CACCGAAAATGCTGATGTCCAGAAGCCACGCCGGAG...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGCTCCGGCGTGGCTTCTaGACATCAGCATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGLRRGF*TSAFSV
Trigger: CACCGAAAATGCTGATGTCCAGAAGCCACGCCGGAG...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGCACATTCTCCTCGATaGCTCTCCAAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQAHSPR*LSKDPG
Trigger: CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGC...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGAGACCTCCTCCCTCATaGTGGCTGGCCGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: PFPGGQQTLFFQITCSVRRPPPS*WLAGGH
Trigger: ATGTCCTCCGGCCAGCCATCATGAGGGAGGAGGTCT...CCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTGGGGCTGGGCATTCTTaGATACCTCATCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIGAGHS*IPHPRF
Trigger: AAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCC...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGGCCACACAGCTCCTTaGATGACACCACCGCATTCT +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPGHTAP*MTPPHS
Trigger: AGAATGCGGTGGTGTCATTCAAGGAGCTGTGTGGCC...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCGGCCACACAGCTCCTTaGATGACACCACCGCATTCT +
Preference number: 4 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPGHTAP*MTPPHS
Trigger: AGAATGCGGTGGTGTCATTCAAGGAGCTGTGTGGCC...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAACAGGGGAGCACTGCTaGCTTCTCTCTCGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSTGEHC*LLSRVC
Trigger: GCAGACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGT...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTACGGACACGCCGAGGCTaGAGTCTCCGTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVRTRRG*SLRWKP
Trigger: GGGTTTCCAACGGAGACTGCAGCCTCGGCGTGTCCG...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAGCAGGCCGCCCGGCTTaGTCTCCCGGGGGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPAGRPA*SPGGGY
Trigger: GTACCCTCCCCCGGGAGAGCAAGCCGGGCGGCCTGC...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGCTCCCTCATGATGGCTaGCCGGAGGACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQLPHDG*PEDIAT
Trigger: TGTGGCTATGTCCTCCGGCCAGCCATCATGAGGGAG...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGTGGCACCTGATCCTTTaGGCTTGGGAAAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGWHLIL*AWESSA
Trigger: GGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCA...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTTCCAAGCTCCGGCGTaGCTTCTGGACATCAGCATT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLFQAPA*LLDISI
Trigger: AATGCTGATGTCCAGAAGCCACGCCGGAGCTTGGAA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCCTCGAATATATCCTGTaGTGTCGGAGGGACCTCGGA +
Preference number: 4 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPLEYIL*CRRDLG
Trigger: TCCGAGGTCCCTCCGACATCACAGGATATATTCGAG...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGCCACACAGCTCCTTaGATGACACCACCGCATTCT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQGHTAP*MTPPHS
Trigger: AGAATGCGGTGGTGTCATTCAAGGAGCTGTGTGGCC...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTATCTCTACCCATGTGCTaGCTCGGCATGTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLSLPMC*LGMYLQ
Trigger: CTGAAGATACATGCCGAGTCAGCACATGGGTAGAGA...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGGAGGAGTCCGGCACAATTCCCTaGAGCTCCATTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: PGGQQTLFFQITCSVREESGTIP*SSIVGY
Trigger: GTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGA...CTCCTCCCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTCTACCACATCACCTTTaGCACCTGATCCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLLPHHL*HLILWA
Trigger: AGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAG...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGTCCCGTATAGGGGGCTaGGCATTCTTGAATACCTCA +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGSRIGG*AFLNTS
Trigger: TGAGGTATTCAAGAATGCCCAGCCCCCTATACGGGA...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTATCCCGTATAGGGGGCTaGGCATTCTTGAATACCTCA +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLSRIGG*AFLNTS
Trigger: TGAGGTATTCAAGAATGCCCAGCCCCCTATACGGGA...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAGCACATTCTCCTCGATaGCTCTCCAAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVAHSPR*LSKDPG
Trigger: CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGC...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
3UTR CAA 72 bp TCGGCATGTATCTTCAGCCAGGGAGCTTCAGTCCAATaGCACATTCTCCTCGATGGCTCTCCAAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: SACIFSQGASVQ*HILLDGSPRTP
Trigger: CGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTGAAGATACATGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGGAGGAGAGCCAGCCCTTTTCCTaGCCCTCTTTGGATGGTTCA +
Preference number: 4 (lower is better)
Translates to: PGGQQTLFFQITCSVREESQPFS*PSLDGS
Trigger: TGAACCATCCAAAGAGGGTCAGGAAAAGGGCTGGCT...CTCCTCCCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTCTGCGGAAAACTATCTaGGAGGTCATGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLLRKTI*EVMVWP
Trigger: AGGCCACACCATGACCTCTCAGATAGTTTTCCGCAG...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCTGCCCTGATTTGCAGATGCTaGCCAGTTCAGACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TSEVRDPVRQLRLPLPSALICRC*PVQTVL
Trigger: AAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAG...GGCAGAGGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTCTTTTGTATTGGCGCTaGAGAAGGAGACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLLLYWR*RRRPPP
Trigger: GGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAAG...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTGAAGAAGTTGAGGTaGGACCCCTGGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSVKKLR*DPWDRV
Trigger: GACTCTGTCCCAGGGGTCTCACCTCAACTTCTTCAC...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGGTGAAGAAGTTGAGGTaGGACCCCTGGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: PFPGGQQTLFFQITCSVRVKKLR*DPWDRV
Trigger: GACTCTGTCCCAGGGGTCTCACCTCAACTTCTTCAC...CCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTAATTTCCAGTGCTCTTaGACAAGGCTGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLNFQCS*TRLWRG
Trigger: ACCTCTCCACAGCCTTGTTCAAGAGCACTGGAAATT...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR TCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTCTGTTGGCATGCTGCTaGATGAGACTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLLLACC*MRLSFS
Trigger: GGAAAAAGACAGTCTCATTCAGCAGCATGCCAACAG...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTTGCTTTTTCGGGTATaGCTTCCAAGCTCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQLLFRV*LPSSGV
Trigger: CACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACAGCAAATGTCCCATCTaGCTACAATTGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYSKCPI*LQLVLE
Trigger: CTCTAGGACCAATTGTAGTCAGATGGGACATTTGCT...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACACCGCCAACATGCACTaGATGAGATTGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDTANMH*MRLATE
Trigger: CTCTGTGGCCAATCTCATGCAGTGCATGTTGGCGGT...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGTCCCACCTTAGGCTCTaGATGTCAGCATCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGSHLRL*MSASSK
Trigger: TTTACTGGATGCTGACATGCAGAGCCTAAGGTGGGA...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACGGTCAGAAATGCCATTaGTGCGGAATATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYGQKCH*CGICLC
Trigger: ACACAGACATATTCCGCAGCAATGGCATTTCTGACC...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTGAGCTTCAGTCCAATTaGACATTCTCCTCGATGGCT +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIELQSN*TFSSMA
Trigger: AGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTC...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACTCCCTCATGATGGCTaGCCGGAGGACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRLPHDG*PEDIAT
Trigger: TGTGGCTATGTCCTCCGGCCAGCCATCATGAGGGAG...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTGGAGCGTCTCCATTCTaGTGCACTGTTTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLGASPF*CTVFVL
Trigger: AAGGACAAAAACAGTGCACCAGAATGGAGACGCTCC...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTCAACATCTGCGGAGTTaGCAACCAAATCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLQHLRS*QPNPVT
Trigger: AGTCACTGGATTTGGTTGCCAACTCCGCAGATGTTG...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTTCCAAGCTCCGGCGTaGCTTCTGGACATCAGCATT +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLFQAPA*LLDISI
Trigger: AATGCTGATGTCCAGAAGCCACGCCGGAGCTTGGAA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATGCACATTCTCCTCGATaGCTCTCCAAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNAHSPR*LSKDPG
Trigger: CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGC...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTGGCTGCAGTCTCCGTTaGAAACCCCGCCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIGCSLR*KPRRCH
Trigger: ATGACAGCGGCGGGGTTTCCAACGGAGACTGCAGCC...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR TCA 90 bp CCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGAGCCAGCCCTTTTCCTaGCCCTCTTTGGATGGTTCA +
Preference number: 4 (lower is better)
Translates to: PFPGGQQTLFFQITCSVRSQPFS*PSLDGS
Trigger: TGAACCATCCAAAGAGGGTCAGGAAAAGGGCTGGCT...CCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTACCCCAGAGCAATTTaGGGACAGCTTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLYPRAI*GQLLCF
Trigger: AAAGCAAAGAAGCTGTCCTCAAATTGCTCTGGGGTA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACTTCTTTGAACTGAACTaGTTTGCAGATGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYFFELN*FADADQ
Trigger: CTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAA...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCTGCCTTCTTTGAACTGAACTaGTTTGCAGATGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: TSEVRDPVRQLRLPLPSAFFELN*FADADQ
Trigger: CTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAA...GGCAGAGGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAAGACCTCCTCCCTCATaGTGGCTGGCCGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSRPPPS*WLAGGH
Trigger: ATGTCCTCCGGCCAGCCATCATGAGGGAGGAGGTCT...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCAGACCTCCTCCCTCATaGTGGCTGGCCGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIRPPPS*WLAGGH
Trigger: ATGTCCTCCGGCCAGCCATCATGAGGGAGGAGGTCT...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACGTGAAGAAGTTGAGGTaGGACCCCTGGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHVKKLR*DPWDRV
Trigger: GACTCTGTCCCAGGGGTCTCACCTCAACTTCTTCAC...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAGTGAAGAAGTTGAGGTaGGACCCCTGGGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVVKKLR*DPWDRV
Trigger: GACTCTGTCCCAGGGGTCTCACCTCAACTTCTTCAC...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACACACAGCTCCTTGAATaGCACCACCGCATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDTQLLE*HHRILH
Trigger: ATGCAGAATGCGGTGGTGTCATTCAAGGAGCTGTGT...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTGGGGTACTGCTCGCTaGGATTTAGGACCACTAGGG +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHWGTAR*DLGPLG
Trigger: CCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCA...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTGTCTTACTTCTGAGGTaGGGGATCCAGTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSVLLLR*GIQCGS
Trigger: GCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGAC...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCAATTTCCAGTGCTCTTaGACAAGGCTGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPNFQCS*TRLWRG
Trigger: ACCTCTCCACAGCCTTGTTCAAGAGCACTGGAAATT...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR TCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCTGGAGCGAACCTTTTTaGGTTCTGAACCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPWSEPF*VLNPQP
Trigger: TGGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCA...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTCTCTACCCATGTGCTaGCTCGGCATGTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLSLPMC*LGMYLQ
Trigger: CTGAAGATACATGCCGAGTCAGCACATGGGTAGAGA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTGGCACATTATTGGGTTaGTCCATGTTCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIGTLLG*SMFSFP
Trigger: GGGAAAAGAGAACATGGAGCAACCCAATAATGTGCC...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGCGTCTCCATTCTGGTaGACTGTTTTTGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGASPFW*TVFVLC
Trigger: ACAAAGGACAAAAACAGTGCACCAGAATGGAGACGC...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTATCCGGCACAATTCCCTaGAGCTCCATTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVSGTIP*SSIVGY
Trigger: GTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGA...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGTCCGGCACAATTCCCTaGAGCTCCATTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SIPWGPADTFLPNHMQCESGTIP*SSIVGY
Trigger: GTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGA...CTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTTGGTGCCTATGCTGTaGAAGTGTTCATGGAATTCC +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLLVPML*KCSWNS
Trigger: GGAATTCCATGAACACTTGCACAGCATAGGCACCAA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCCTTCCTTGGTGCCTATaGTGTGCAAGTGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPLPWCL*CASVHG
Trigger: TCCATGAACACTTGCACAGCATAGGCACCAAGGAAG...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTCAAACCTTCCTTGGTaGCTATGCTGTGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLSNLPW*LCCASV
Trigger: AACACTTGCACAGCATAGGCACCAAGGAAGGTTTGA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGTCACAGGGGAGCACTaGTGCCTTCTCTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMVTGEH*CLLSRV
Trigger: GACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGTGAC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTACGGACACGCCGAGGCTaGAGTCTCCGTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVRTRRG*SLRWKP
Trigger: GGGTTTCCAACGGAGACTGCAGCCTCGGCGTGTCCG...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCTCCCTCATGATGGCTaGCCGGAGGACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVILPHDG*PEDIAT
Trigger: TGTGGCTATGTCCTCCGGCCAGCCATCATGAGGGAG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACAGCTTTCATCAAAAATaGGAGCGTCTCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYSFHQK*ERLHSG
Trigger: ACCAGAATGGAGACGCTCCCATTTTTGATGAAAGCT...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCTGCCAGCTTTCATCAAAAATaGGAGCGTCTCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: TSEVRDPVRQLRLPLPSASFHQK*ERLHSG
Trigger: ACCAGAATGGAGACGCTCCCATTTTTGATGAAAGCT...GGCAGAGGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTAAGGGAATTGTGTACTaGCCGATGAATTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIKGIVY*PMNSSP
Trigger: TGGGGATGAATTCATCGGCCAGTACACAATTCCCTT...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACTCCCGTATAGGGGGCTaGGCATTCTTGAATACCTCA +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDSRIGG*AFLNTS
Trigger: TGAGGTATTCAAGAATGCCCAGCCCCCTATACGGGA...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACGTTCATGGAATTCCATaGCTGCCTTCTGACAATGTA +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYVHGIP*LPSDNV
Trigger: TACATTGTCAGAAGGCAGCCATGGAATTCCATGAAC...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGGTTGCTTCATATCCTaGCAGACCTTCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGGCFIS*QTFLCS
Trigger: AGAACATAAGAAGGTCTGTCAGGATATGAAGCAACC...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGAGGGACCTCGGAACTaGTCCTCTATTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPEGPRN*SSIKYV
Trigger: TACATACTTAATAGAGGATCAGTTCCGAGGTCCCTC...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCCTGCGGAAAACTATCTaGGAGGTCATGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGALRKTI*EVMVWP
Trigger: AGGCCACACCATGACCTCTCAGATAGTTTTCCGCAG...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTACTGCGGAAAACTATCTaGGAGGTCATGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVLRKTI*EVMVWP
Trigger: AGGCCACACCATGACCTCTCAGATAGTTTTCCGCAG...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTTCCTCAACATTGGGTaGTGTTGTATAGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLFLNIG*CCIELV
Trigger: GACAAGCTCTATACAACATCACCCAATGTTGAGGAA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGAGTTCTTTACAAAGCTaGAATCGCTTCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGSSLQS*NRFTGT
Trigger: TGTGCCTGTGAAGCGATTTCAGCTTTGTAAAGAACT...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTAGTTCTTTACAAAGCTaGAATCGCTTCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYISSLQS*NRFTGT
Trigger: TGTGCCTGTGAAGCGATTTCAGCTTTGTAAAGAACT...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACTTTTGTATTGGCGCTaGAGAAGGAGACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRLLYWR*RRRPPP
Trigger: GGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAAG...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAGGGGCTGGGCATTCTTaGATACCTCATCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVGAGHS*IPHPRF
Trigger: AAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCC...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAACACAGCTCCTTGAATaGCACCACCGCATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSTQLLE*HHRILH
Trigger: ATGCAGAATGCGGTGGTGTCATTCAAGGAGCTGTGT...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGACACAGCTCCTTGAATaGCACCACCGCATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PFPGGQQTLFFQITCSVRTQLLE*HHRILH
Trigger: ATGCAGAATGCGGTGGTGTCATTCAAGGAGCTGTGT...CCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTGGGGTACTGCTCGCTaGGATTTAGGACCACTAGGG +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNWGTAR*DLGPLG
Trigger: CCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCA...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTTTCAATCAACGCCTTaGGGGACTGAATCATCATGT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLFQSTP*GTESSC
Trigger: ACATGATGATTCAGTCCCTCAAGGCGTTGATTGAAA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCCATGGCTGCCTTCTaGCAATGTACGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPSMAAF*QCTIFS
Trigger: TGAAAAGATCGTACATTGTCAGAAGGCAGCCATGGA...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACGTCTTCCCTGCCCGGTaGTGGAGCACGTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDVFPAR*WSTSQG
Trigger: CCCCTGTGACGTGCTCCATCACCGGGCAGGGAAGAC...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR TCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTGGAGCGAACCTTTTTaGGTTCTGAACCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLWSEPF*VLNPQP
Trigger: TGGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCGGCACATTATTGGGTTaGTCCATGTTCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPGTLLG*SMFSFP
Trigger: GGGAAAAGAGAACATGGAGCAACCCAATAATGTGCC...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCCCACAGTTTCCGTTCTaGCTAAACCAGCCAATATTC +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPPQFPF*LNQPIF
Trigger: GAATATTGGCTGGTTTAGGCAGAACGGAAACTGTGG...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCACCGCCAACATGCACTaGATGAGATTGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGATANMH*MRLATE
Trigger: CTCTGTGGCCAATCTCATGCAGTGCATGTTGGCGGT...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCTTGGTGCCTATGCTGTaGAAGTGTTCATGGAATTCC +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPLVPML*KCSWNS
Trigger: GGAATTCCATGAACACTTGCACAGCATAGGCACCAA...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTCTTCCTTGGTGCCTATaGTGTGCAAGTGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLLPWCL*CASVHG
Trigger: TCCATGAACACTTGCACAGCATAGGCACCAAGGAAG...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCACAGCGGTGTCTTCCCTaGCCGGTGATGGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPQRCLP*PVMEHV
Trigger: GACGTGCTCCATCACCGGGCAGGGAAGACACCGCTG...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTAATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLMAQQA*HQNHLE
Trigger: TTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCAT...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTCTATCTGAGAGGTCATaGTGTGGCCTGTGTAAATTA +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLLSERS*CGLCKL
Trigger: TAATTTACACAGGCCACACCATGACCTCTCAGATAG...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTCACAGGCACATTATTaGGTTGCTCCATGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLSQAHY*VAPCSL
Trigger: AAGAGAACATGGAGCAACCCAATAATGTGCCTGTGA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGCCCCTGGATTTTCATTaGCGTACTTGCTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQPLDFH*RTCWQA
Trigger: TGCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGG...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTGTCCATCATCAGTCCTaGTGTCTGAAAGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLVHHQS*CLKVHG
Trigger: GCCATGAACTTTCAGACACCAGGACTGATGATGGAC...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTGGCACCTGATCCTTTaGGCTTGGGAAAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHWHLIL*AWESSA
Trigger: GGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCA...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTAGTTCATGGAATTCCATaGCTGCCTTCTGACAATGTA +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLVHGIP*LPSDNV
Trigger: TACATTGTCAGAAGGCAGCCATGGAATTCCATGAAC...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCACCTTCCATTCCCTaGGGGCCAGCAGACACTTTT +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGAPSIP*GPADTF
Trigger: AAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAAAGGCTGTGGAGAGGTaGCAGCGGTGTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVKAVER*QRCLPC
Trigger: GCAGGGAAGACACCGCTGCCACCTCTCCACAGCCTT...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CCA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACGAAACAGCAGCAAAATaGATTTGTTTCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYETAAK*ICFRFS
Trigger: GGAGAACCTGAAACAAATCCATTTTGCTGCTGTTTC...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTATTCCAAGCTCCGGCGTaGCTTCTGGACATCAGCATT +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVFQAPA*LLDISI
Trigger: AATGCTGATGTCCAGAAGCCACGCCGGAGCTTGGAA...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAGCACATTCTCCTCGATaGCTCTCCAAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVAHSPR*LSKDPG
Trigger: CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGC...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGGTTGCTTCATATCCTaGCAGACCTTCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPGCFIS*QTFLCS
Trigger: AGAACATAAGAAGGTCTGTCAGGATATGAAGCAACC...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTCTCGAATATATCCTGTaGTGTCGGAGGGACCTCGGA +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSLEYIL*CRRDLG
Trigger: TCCGAGGTCCCTCCGACATCACAGGATATATTCGAG...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTAAGTTTCTTCATGTGCTaGACCATTACCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLSFFMC*TITFCC
Trigger: ACAACAGAAGGTAATGGTTCAGCACATGAAGAAACT...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCAGTTCTTTACAAAGCTaGAATCGCTTCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPSSLQS*NRFTGT
Trigger: TGTGCCTGTGAAGCGATTTCAGCTTTGTAAAGAACT...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGCTGATTTGCAGATGCTaGCCAGTTCAGACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQLICRC*PVQTVL
Trigger: AAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAG...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCATCAGTCCTGGTGTCTaGAAGTTCATGGCTACAATT +
Preference number: 4 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPISPGV*KFMATI
Trigger: AATTGTAGCCATGAACTTTCAGACACCAGGACTGAT...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGCTTTTGTATTGGCGCTaGAGAAGGAGACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGLLYWR*RRRPPP
Trigger: GGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAAG...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCTCTGCCTCAGGCAGGTTGATTTaGAATTCAAAGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: TSEVRDPVRQLRLPLPSASGRLI*NSKLSS
Trigger: TGATGAAAGCTTTGAATTTCAAATCAACCTGCCTGA...GGCAGAGGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTGGGGCTGGGCATTCTTaGATACCTCATCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIGAGHS*IPHPRF
Trigger: AAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCC...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAACACAGCTCCTTGAATaGCACCACCGCATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVTQLLE*HHRILH
Trigger: ATGCAGAATGCGGTGGTGTCATTCAAGGAGCTGTGT...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAGGCCACACAGCTCCTTaGATGACACCACCGCATTCT +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSGHTAP*MTPPHS
Trigger: AGAATGCGGTGGTGTCATTCAAGGAGCTGTGTGGCC...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGTGGGGTACTGCTCGCTaGGATTTAGGACCACTAGGG +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMWGTAR*DLGPLG
Trigger: CCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCA...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTCCATGGCTGCCTTCTaGCAATGTACGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQSMAAF*QCTIFS
Trigger: TGAAAAGATCGTACATTGTCAGAAGGCAGCCATGGA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCATGGCATGCTGCTGAATaGGACTGTCTTTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSWHAAE*DCLFPF
Trigger: GAACGGAAAAAGACAGTCTCATTCAGCAGCATGCCA...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGCCTCTGAGACATTTCTaGTCCTTCATCTTCGTCAGT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQPLRHF*SFIFVS
Trigger: ACTGACGAAGATGAAGGAGCAGAAATGTCTCAGAGG...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGCGTCTCCATTCTGGTaGACTGTTTTTGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQASPFW*TVFVLC
Trigger: ACAAAGGACAAAAACAGTGCACCAGAATGGAGACGC...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTATCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVSIVGY*SLRFRT
Trigger: GGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGA...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCTCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACC +
Preference number: 4 (lower is better)
Translates to: TAKISTFHSLGASRHFSSSIVGY*SLRFRT
Trigger: GGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGA...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACTTGGTGCCTATGCTGTaGAAGTGTTCATGGAATTCC +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDLVPML*KCSWNS
Trigger: GGAATTCCATGAACACTTGCACAGCATAGGCACCAA...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGGAGGAGTTGGTGCCTATGCTGTaGAAGTGTTCATGGAATTCC +
Preference number: 4 (lower is better)
Translates to: PGGQQTLFFQITCSVREELVPML*KCSWNS
Trigger: GGAATTCCATGAACACTTGCACAGCATAGGCACCAA...CTCCTCCCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTACTCTCGGGTCTGCTTTaGTCCTCTTTTGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVLSGLL*SSFAVL
Trigger: AAGGACTGCAAAAGAGGAGCAAAGCAGACCCGAGAG...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCATCCCACCTTAGGCTCTaGATGTCAGCATCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSSHLRL*MSASSK
Trigger: TTTACTGGATGCTGACATGCAGAGCCTAAGGTGGGA...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTATATCTGGTCAGAAATaGCATTGCTGCGGAATATGT +
Preference number: 4 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLISGQK*HCCGIC
Trigger: ACATATTCCGCAGCAATGGCATTTCTGACCAGATAT...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTATATCTGGTCAGAAATaGCATTGCTGCGGAATATGT +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIISGQK*HCCGIC
Trigger: ACATATTCCGCAGCAATGGCATTTCTGACCAGATAT...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTGCCACACCCTGTTCTaGCTCAAGAAACATCATAAG +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQCHTLF*LKKHHK
Trigger: CTTATGATGTTTCTTGAGGCAGAACAGGGTGTGGCA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGAGCTTCAGTCCAATTaGACATTCTCCTCGATGGCT +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSELQSN*TFSSMA
Trigger: AGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTC...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTATGTTTCCAGATTGGCTaGTTTTACATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLCFQIG*FYIIST
Trigger: GGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCCTATCTGAGAGGTCATaGTGTGGCCTGTGTAAATTA +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPLSERS*CGLCKL
Trigger: TAATTTACACAGGCCACACCATGACCTCTCAGATAG...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTACCCCTGGATTTTCATTaGCGTACTTGCTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVPLDFH*RTCWQA
Trigger: TGCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGG...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTTGGCACCTGATCCTTTaGGCTTGGGAAAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIWHLIL*AWESSA
Trigger: GGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCA...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTAAGGGAATTGTGTACTaGCCGATGAATTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLKGIVY*PMNSSP
Trigger: TGGGGATGAATTCATCGGCCAGTACACAATTCCCTT...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCTCCCGTATAGGGGGCTaGGCATTCTTGAATACCTCA +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGASRIGG*AFLNTS
Trigger: TGAGGTATTCAAGAATGCCCAGCCCCCTATACGGGA...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGCTCCGGCGTGGCTTCTaGACATCAGCATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMLRRGF*TSAFSV
Trigger: CACCGAAAATGCTGATGTCCAGAAGCCACGCCGGAG...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCAGCCAGCCCTTTTCCTaGCCCTCTTTGGATGGTTCA +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACISQPFS*PSLDGS
Trigger: TGAACCATCCAAAGAGGGTCAGGAAAAGGGCTGGCT...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGGAGGGACCTCGGAACTaGTCCTCTATTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQEGPRN*SSIKYV
Trigger: TACATACTTAATAGAGGATCAGTTCCGAGGTCCCTC...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGCTCGAATATATCCTGTaGTGTCGGAGGGACCTCGGA +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMLEYIL*CRRDLG
Trigger: TCCGAGGTCCCTCCGACATCACAGGATATATTCGAG...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCCTGCGGAAAACTATCTaGGAGGTCATGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACILRKTI*EVMVWP
Trigger: AGGCCACACCATGACCTCTCAGATAGTTTTCCGCAG...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGCTGCGGAAAACTATCTaGGAGGTCATGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLLRKTI*EVMVWP
Trigger: AGGCCACACCATGACCTCTCAGATAGTTTTCCGCAG...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATAAGAGGATACTCTaGAGCAAAGAATGCATACTT +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGDKRIL*SKECIL
Trigger: AAGTATGCATTCTTTGCTTCAGAGTATCCTCTTATC...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACTTCCTCAACATTGGGTaGTGTTGTATAGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDFLNIG*CCIELV
Trigger: GACAAGCTCTATACAACATCACCCAATGTTGAGGAA...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGAGTTCTTTACAAAGCTaGAATCGCTTCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQSSLQS*NRFTGT
Trigger: TGTGCCTGTGAAGCGATTTCAGCTTTGTAAAGAACT...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGATCAGTCCTGGTGTCTaGAAGTTCATGGCTACAATT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQISPGV*KFMATI
Trigger: AATTGTAGCCATGAACTTTCAGACACCAGGACTGAT...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACAGACCTCCTCCCTCATaGTGGCTGGCCGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDRPPPS*WLAGGH
Trigger: ATGTCCTCCGGCCAGCCATCATGAGGGAGGAGGTCT...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGTCAGGCAGGTTGATTTaGAATTCAAAGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGSGRLI*NSKLSS
Trigger: TGATGAAAGCTTTGAATTTCAAATCAACCTGCCTGA...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAGGGGCTGGGCATTCTTaGATACCTCATCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSGAGHS*IPHPRF
Trigger: AAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCC...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGACACAGCTCCTTGAATaGCACCACCGCATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGTQLLE*HHRILH
Trigger: ATGCAGAATGCGGTGGTGTCATTCAAGGAGCTGTGT...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTATGGGGTACTGCTCGCTaGGATTTAGGACCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LEKNSCLTSEVRDPVRQLWGTAR*DLGPLG
Trigger: CCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCA...TAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACAGTTGTCTTACTTCTaGGGTGAGGGATCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSQLSYF*GEGSSA
Trigger: CGCACTGGATCCCTCACCTCAGAAGTAAGACAACTG...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCTTCACTCAAATTTCCTaGGCAGCAACCACTGTAAAA +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPFTQIS*AATTVK
Trigger: TTTTACAGTGGTTGCTGCTCAGGAAATTTGAGTGAA...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR TCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGAATTCTCTCCATATATaGCGGAAAACGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGNSLHI*RKTHNL
Trigger: AAGATTGTGCGTTTTCCGTCATATATGGAGAGAATT...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGTTCACTAAACATTTGTaGAACCCAAGAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGFTKHL*NPRSPH
Trigger: ATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAA...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGTCAGTGGAGCTAGAGTaGATAATCTTTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGSVELE*IIFLHT
Trigger: AGTATGAAGAAAGATTATTCACTCTAGCTCCACTGA...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGCCTCTGAGACATTTCTaGTCCTTCATCTTCGTCAGT +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQPLRHF*SFIFVS
Trigger: ACTGACGAAGATGAAGGAGCAGAAATGTCTCAGAGG...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp CCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGGGCACATTATTGGGTTaGTCCATGTTCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: PFPGGQQTLFFQITCSVRGTLLG*SMFSFP
Trigger: GGGAAAAGAGAACATGGAGCAACCCAATAATGTGCC...CCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp CCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGCCACAGTTTCCGTTCTaGCTAAACCAGCCAATATTC +
Preference number: 4 (lower is better)
Translates to: PFPGGQQTLFFQITCSVRPQFPF*LNQPIF
Trigger: GAATATTGGCTGGTTTAGGCAGAACGGAAACTGTGG...CCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAACCGCCAACATGCACTaGATGAGATTGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSTANMH*MRLATE
Trigger: CTCTGTGGCCAATCTCATGCAGTGCATGTTGGCGGT...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGCTTTGCTCCTCTTTTaGAGTCCTTCACTCAAATTT +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPALLLF*SPSLKF
Trigger: AAATTTGAGTGAAGGACTGCAAAAGAGGAGCAAAGC...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCTCTCGGGTCTGCTTTaGTCCTCTTTTGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVILSGLL*SSFAVL
Trigger: AAGGACTGCAAAAGAGGAGCAAAGCAGACCCGAGAG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCATGCCACACCCTGTTCTaGCTCAAGAAACATCATAAG +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSCHTLF*LKKHHK
Trigger: CTTATGATGTTTCTTGAGGCAGAACAGGGTGTGGCA...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQMAQQA*HQNHLE
Trigger: TTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCAT...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCTGTTTCCAGATTGGCTaGTTTTACATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPCFQIG*FYIIST
Trigger: GGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCCCCTGGATTTTCATTaGCGTACTTGCTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIPLDFH*RTCWQA
Trigger: TGCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTAATTTACAAAGTCCCCTaGATTTTCATTGGCGTACTT +
Preference number: 4 (lower is better)
Translates to: FSSMALQGPRGFREPVHLIYKVP*IFIGVL
Trigger: AAGTACGCCAATGAAAATCCAGGGGACTTTGTAAAT...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTGAGGATTCATGTTACTaGAATCAATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIEDSCY*NQFSLD
Trigger: GTCCAATGAGAATTGATTCCAGTAACATGAATCCTC...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGAGTCCATCATCAGTCCTaGTGTCTGAAAGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRVHHQS*CLKVHG
Trigger: GCCATGAACTTTCAGACACCAGGACTGATGATGGAC...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACGTCCATCATCAGTCCTaGTGTCTGAAAGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHVHHQS*CLKVHG
Trigger: GCCATGAACTTTCAGACACCAGGACTGATGATGGAC...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCGGAGCGTCTCCATTCTaGTGCACTGTTTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGAGASPF*CTVFVL
Trigger: AAGGACAAAAACAGTGCACCAGAATGGAGACGCTCC...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACAGCTTTCATCAAAAATaGGAGCGTCTCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDSFHQK*ERLHSG
Trigger: ACCAGAATGGAGACGCTCCCATTTTTGATGAAAGCT...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGAAGGGAATTGTGTACTaGCCGATGAATTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQKGIVY*PMNSSP
Trigger: TGGGGATGAATTCATCGGCCAGTACACAATTCCCTT...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGTCCCGTATAGGGGGCTaGGCATTCTTGAATACCTCA +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGSRIGG*AFLNTS
Trigger: TGAGGTATTCAAGAATGCCCAGCCCCCTATACGGGA...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACGTTCATGGAATTCCATaGCTGCCTTCTGACAATGTA +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDVHGIP*LPSDNV
Trigger: TACATTGTCAGAAGGCAGCCATGGAATTCCATGAAC...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGAAACAGCAGCAAAATaGATTTGTTTCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPETAAK*ICFRFS
Trigger: GGAGAACCTGAAACAAATCCATTTTGCTGCTGTTTC...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACAGAACCCAGAGACTCTaGCAACCCCATATAAGTAAA +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDRTQRL*QPHISK
Trigger: TTTACTTATATGGGGTTGCCAGAGTCTCTGGGTTCT...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTAGAACCCAGAGACTCTaGCAACCCCATATAAGTAAA +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLRTQRL*QPHISK
Trigger: TTTACTTATATGGGGTTGCCAGAGTCTCTGGGTTCT...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAAGCCAGCCCTTTTCCTaGCCCTCTTTGGATGGTTCA +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSASQPFS*PSLDGS
Trigger: TGAACCATCCAAAGAGGGTCAGGAAAAGGGCTGGCT...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACGAGGGACCTCGGAACTaGTCCTCTATTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHEGPRN*SSIKYV
Trigger: TACATACTTAATAGAGGATCAGTTCCGAGGTCCCTC...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCACTCGAATATATCCTGTaGTGTCGGAGGGACCTCGGA +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSALEYIL*CRRDLG
Trigger: TCCGAGGTCCCTCCGACATCACAGGATATATTCGAG...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGAGTTTCTTCATGTGCTaGACCATTACCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQSFFMC*TITFCC
Trigger: ACAACAGAAGGTAATGGTTCAGCACATGAAGAAACT...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCTACCCCAGAGCAATTTaGGGACAGCTTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TAKISTFHSLGASRHFSSYPRAI*GQLLCF
Trigger: AAAGCAAAGAAGCTGTCCTCAAATTGCTCTGGGGTA...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGATACCCCAGAGCAATTTaGGGACAGCTTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRYPRAI*GQLLCF
Trigger: AAAGCAAAGAAGCTGTCCTCAAATTGCTCTGGGGTA...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACTGATTTGCAGATGCTaGCCAGTTCAGACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRLICRC*PVQTVL
Trigger: AAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAG...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTTTCAATCAACGCCTTaGGGGACTGAATCATCATGT +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQFQSTP*GTESSC
Trigger: ACATGATGATTCAGTCCCTCAAGGCGTTGATTGAAA...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCTCCATGGCTGCCTTCTaGCAATGTACGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TAKISTFHSLGASRHFSSSMAAF*QCTIFS
Trigger: TGAAAAGATCGTACATTGTCAGAAGGCAGCCATGGA...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACACCATTATGGGAGTCTaGGGCACAAAAATACTCCTC +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHTIMGV*GTKILL
Trigger: GAGGAGTATTTTTGTGCCTCAGACTCCCATAATGGT...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTACAGTTGTCTTACTTCTaGGGTGAGGGATCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: LEKNSCLTSEVRDPVRQLQLSYF*GEGSSA
Trigger: CGCACTGGATCCCTCACCTCAGAAGTAAGACAACTG...TAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGCAACCAAATCCAGTaGCTCATAATTCTCTCCATA +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSGNQIQ*LIILSI
Trigger: TATGGAGAGAATTATGAGTCACTGGATTTGGTTGCC...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATTGCTTTTTCGGGTATaGCTTCCAAGCTCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSALLFRV*LPSSGV
Trigger: CACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAA...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCCCACAGTTTCCGTTCTaGCTAAACCAGCCAATATTC +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGAPQFPF*LNQPIF
Trigger: GAATATTGGCTGGTTTAGGCAGAACGGAAACTGTGG...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCGCGTCTCCATTCTGGTaGACTGTTTTTGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGAASPFW*TVFVLC
Trigger: ACAAAGGACAAAAACAGTGCACCAGAATGGAGACGC...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACGACACCACCGCATTCTaGATGTTTTCTCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHDTTAF*MFSLRS
Trigger: AGATCTGAGAGAAAACATGCAGAATGCGGTGGTGTC...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGACACCACCGCATTCTaGATGTTTTCTCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: SIPWGPADTFLPNHMQCEDTTAF*MFSLRS
Trigger: AGATCTGAGAGAAAACATGCAGAATGCGGTGGTGTC...CTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCATCCGGCACAATTCCCTaGAGCTCCATTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPSGTIP*SSIVGY
Trigger: GTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGA...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCTTGGTGCCTATGCTGTaGAAGTGTTCATGGAATTCC +
Preference number: 4 (lower is better)
Translates to: TAKISTFHSLGASRHFSSLVPML*KCSWNS
Trigger: GGAATTCCATGAACACTTGCACAGCATAGGCACCAA...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTATTGGTGCCTATGCTGTaGAAGTGTTCATGGAATTCC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVLVPML*KCSWNS
Trigger: GGAATTCCATGAACACTTGCACAGCATAGGCACCAA...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGATCAAACCTTCCTTGGTaGCTATGCTGTGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRSNLPW*LCCASV
Trigger: AACACTTGCACAGCATAGGCACCAAGGAAGGTTTGA...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTGTCACAGGGGAGCACTaGTGCCTTCTCTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIVTGEH*CLLSRV
Trigger: GACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGTGAC...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAGATGTTTGCAACATCTaGGGAGTTGGCAACCAAATC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVDVCNI*GVGNQI
Trigger: GATTTGGTTGCCAACTCCGCAGATGTTGCAAACATC...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTATGCCACACCCTGTTCTaGCTCAAGAAACATCATAAG +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVCHTLF*LKKHHK
Trigger: CTTATGATGTTTCTTGAGGCAGAACAGGGTGTGGCA...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACGTTAAAGAGTTTATTTaGCTTCACACGCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDVKEFI*LHTQDC
Trigger: GCAATCCTGCGTGTGAAGGCAAATAAACTCTTTAAC...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTGTTTCCAGATTGGCTaGTTTTACATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLCFQIG*FYIIST
Trigger: GGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGACCTTCTTATGTTCTaGATCGAATATATAACAGTC +
Preference number: 4 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGDLLMF*IEYITV
Trigger: GACTGTTATATATTCGATCCAGAACATAAGAAGGTC...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTGACCTTCTTATGTTCTaGATCGAATATATAACAGTC +
Preference number: 4 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIDLLMF*IEYITV
Trigger: GACTGTTATATATTCGATCCAGAACATAAGAAGGTC...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGCTATCTGAGAGGTCATaGTGTGGCCTGTGTAAATTA +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQLSERS*CGLCKL
Trigger: TAATTTACACAGGCCACACCATGACCTCTCAGATAG...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCAAGATTCCTCAACATTaGGTGATGTTGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPKIPQH*VMLYRA
Trigger: AGCTCTATACAACATCACCCAATGTTGAGGAATCTT...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACCCCTGGATTTTCATTaGCGTACTTGCTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSPLDFH*RTCWQA
Trigger: TGCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGG...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGCCCCTGGATTTTCATTaGCGTACTTGCTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMPLDFH*RTCWQA
Trigger: TGCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGG...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGAGGATTCATGTTACTaGAATCAATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: NCTFSSMALQGPRGFREPEDSCY*NQFSLD
Trigger: GTCCAATGAGAATTGATTCCAGTAACATGAATCCTC...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATGTCCATCATCAGTCCTaGTGTCTGAAAGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNVHHQS*CLKVHG
Trigger: GCCATGAACTTTCAGACACCAGGACTGATGATGGAC...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGCTACCACATCACCTTTaGCACCTGATCCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLLPHHL*HLILWA
Trigger: AGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAG...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGGAGCGTCTCCATTCTaGTGCACTGTTTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGGASPF*CTVFVL
Trigger: AAGGACAAAAACAGTGCACCAGAATGGAGACGCTCC...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGAGCTTTCATCAAAAATaGGAGCGTCTCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQSFHQK*ERLHSG
Trigger: ACCAGAATGGAGACGCTCCCATTTTTGATGAAAGCT...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCTGTGCAAGTGTTCATaGAATTCCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVILCKCS*NSMAAF
Trigger: GAAGGCAGCCATGGAATTCCATGAACACTTGCACAG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCGGTTGCTTCATATCCTaGCAGACCTTCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: TAKISTFHSLGASRHFSSGCFIS*QTFLCS
Trigger: AGAACATAAGAAGGTCTGTCAGGATATGAAGCAACC...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATGAGGGACCTCGGAACTaGTCCTCTATTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNEGPRN*SSIKYV
Trigger: TACATACTTAATAGAGGATCAGTTCCGAGGTCCCTC...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCACTCGAATATATCCTGTaGTGTCGGAGGGACCTCGGA +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPLEYIL*CRRDLG
Trigger: TCCGAGGTCCCTCCGACATCACAGGATATATTCGAG...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCTTCCTCAACATTGGGTaGTGTTGTATAGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: TAKISTFHSLGASRHFSSFLNIG*CCIELV
Trigger: GACAAGCTCTATACAACATCACCCAATGTTGAGGAA...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTTCCATGGCTGCCTTCTaGCAATGTACGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVISMAAF*QCTIFS
Trigger: TGAAAAGATCGTACATTGTCAGAAGGCAGCCATGGA...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCCATGGCTGCCTTCTaGCAATGTACGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNSMAAF*QCTIFS
Trigger: TGAAAAGATCGTACATTGTCAGAAGGCAGCCATGGA...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCCACATGCTTGGATGTTaGAGACAGCAAAGATTAGCA +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGAHMLGC*RQQRLA
Trigger: TGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTG...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACCACATGCTTGGATGTTaGAGACAGCAAAGATTAGCA +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHHMLGC*RQQRLA
Trigger: TGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTG...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGTGGCATGCTGCTGAATaGGACTGTCTTTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMWHAAE*DCLFPF
Trigger: GAACGGAAAAAGACAGTCTCATTCAGCAGCATGCCA...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGCTGTTGGCATGCTGCTaGATGAGACTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMLLACC*MRLSFS
Trigger: GGAAAAAGACAGTCTCATTCAGCAGCATGCCAACAG...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGTGGAGCGAACCTTTTTaGGTTCTGAACCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMWSEPF*VLNPQP
Trigger: TGGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCA...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGAATTCTCTCCATATATaGCGGAAAACGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQNSLHI*RKTHNL
Trigger: AAGATTGTGCGTTTTCCGTCATATATGGAGAGAATT...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACTCAGTGGAGCTAGAGTaGATAATCTTTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDSVELE*IIFLHT
Trigger: AGTATGAAGAAAGATTATTCACTCTAGCTCCACTGA...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCCTCTGAGACATTTCTaGTCCTTCATCTTCGTCAGT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIPLRHF*SFIFVS
Trigger: ACTGACGAAGATGAAGGAGCAGAAATGTCTCAGAGG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATCCACAGTTTCCGTTCTaGCTAAACCAGCCAATATTC +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNPQFPF*LNQPIF
Trigger: GAATATTGGCTGGTTTAGGCAGAACGGAAACTGTGG...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTGCGTCTCCATTCTGGTaGACTGTTTTTGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSASPFW*TVFVLC
Trigger: ACAAAGGACAAAAACAGTGCACCAGAATGGAGACGC...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATTCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACC +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHSIVGY*SLRFRT
Trigger: GGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGA...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACTTCCTTGGTGCCTATaGTGTGCAAGTGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSLPWCL*CASVHG
Trigger: TCCATGAACACTTGCACAGCATAGGCACCAAGGAAG...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTTCAAACCTTCCTTGGTaGCTATGCTGTGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVISNLPW*LCCASV
Trigger: AACACTTGCACAGCATAGGCACCAAGGAAGGTTTGA...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGTTCTTCCAAATCACATaGAGTGTGAGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGFFQIT*SVREEK
Trigger: CTTCTCCTCCCTCACACTGCATGTGATTTGGAAGAA...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTGGTCAGAAATGCCATTaGTGCGGAATATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIGQKCH*CGICLC
Trigger: ACACAGACATATTCCGCAGCAATGGCATTTCTGACC...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGAGGTTTCTGATACATTaGACAGCATTACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQRFLIH*TALHRV
Trigger: AACTCTGTGTAATGCTGTGCAATGTATCAGAAACCT...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGCTATCTGAGAGGTCATaGTGTGGCCTGTGTAAATTA +
Preference number: 4 (lower is better)
Translates to: SIPWGPADTFLPNHMQCELSERS*CGLCKL
Trigger: TAATTTACACAGGCCACACCATGACCTCTCAGATAG...CTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTAAGATTCCTCAACATTaGGTGATGTTGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLKIPQH*VMLYRA
Trigger: AGCTCTATACAACATCACCCAATGTTGAGGAATCTT...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCTCACAGGCACATTATTaGGTTGCTCCATGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGASQAHY*VAPCSL
Trigger: AAGAGAACATGGAGCAACCCAATAATGTGCCTGTGA...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGGAGGAGATTTACAAAGTCCCCTaGATTTTCATTGGCGTACTT +
Preference number: 4 (lower is better)
Translates to: PGGQQTLFFQITCSVREEIYKVP*IFIGVL
Trigger: AAGTACGCCAATGAAAATCCAGGGGACTTTGTAAAT...CTCCTCCCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACATTTACAAAGTCCCCTaGATTTTCATTGGCGTACTT +
Preference number: 4 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDIYKVP*IFIGVL
Trigger: AAGTACGCCAATGAAAATCCAGGGGACTTTGTAAAT...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCATGGCACCTGATCCTTTaGGCTTGGGAAAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPWHLIL*AWESSA
Trigger: GGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCA...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTACTACCACATCACCTTTaGCACCTGATCCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVLPHHL*HLILWA
Trigger: AGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAG...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGGAGCGTCTCCATTCTaGTGCACTGTTTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMGASPF*CTVFVL
Trigger: AAGGACAAAAACAGTGCACCAGAATGGAGACGCTCC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTAAGGGAATTGTGTACTaGCCGATGAATTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSKGIVY*PMNSSP
Trigger: TGGGGATGAATTCATCGGCCAGTACACAATTCCCTT...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACTGTGCAAGTGTTCATaGAATTCCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSLCKCS*NSMAAF
Trigger: GAAGGCAGCCATGGAATTCCATGAACACTTGCACAG...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCCAACATCTGCGGAGTTaGCAACCAAATCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIQHLRS*QPNPVT
Trigger: AGTCACTGGATTTGGTTGCCAACTCCGCAGATGTTG...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGTATTGTTTCCAGATTaGCTGCTTTTACATCATCTC +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQVLFPD*LLLHHL
Trigger: GAGATGATGTAAAAGCAGCCAATCTGGAAACAATAC...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACAGCCAGCCCTTTTCCTaGCCCTCTTTGGATGGTTCA +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDSQPFS*PSLDGS
Trigger: TGAACCATCCAAAGAGGGTCAGGAAAAGGGCTGGCT...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTGGTTGCTTCATATCCTaGCAGACCTTCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIGCFIS*QTFLCS
Trigger: AGAACATAAGAAGGTCTGTCAGGATATGAAGCAACC...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGGATAAGAGGATACTCTaGAGCAAAGAATGCATACTT +
Preference number: 4 (lower is better)
Translates to: PFPGGQQTLFFQITCSVRDKRIL*SKECIL
Trigger: AAGTATGCATTCTTTGCTTCAGAGTATCCTCTTATC...CCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGATAAGAGGATACTCTaGAGCAAAGAATGCATACTT +
Preference number: 4 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSDKRIL*SKECIL
Trigger: AAGTATGCATTCTTTGCTTCAGAGTATCCTCTTATC...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTTCCTCAACATTGGGTaGTGTTGTATAGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSFLNIG*CCIELV
Trigger: GACAAGCTCTATACAACATCACCCAATGTTGAGGAA...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCTACCCCAGAGCAATTTaGGGACAGCTTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIYPRAI*GQLLCF
Trigger: AAAGCAAAGAAGCTGTCCTCAAATTGCTCTGGGGTA...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTATCAGTCCTGGTGTCTaGAAGTTCATGGCTACAATT +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSISPGV*KFMATI
Trigger: AATTGTAGCCATGAACTTTCAGACACCAGGACTGAT...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGACCTCCTCCCTCATaGTGGCTGGCCGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRRPPPS*WLAGGH
Trigger: ATGTCCTCCGGCCAGCCATCATGAGGGAGGAGGTCT...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTGGGGTACTGCTCGCTaGGATTTAGGACCACTAGGG +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIWGTAR*DLGPLG
Trigger: CCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGTCCATGGCTGCCTTCTaGCAATGTACGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMSMAAF*QCTIFS
Trigger: TGAAAAGATCGTACATTGTCAGAAGGCAGCCATGGA...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGGCATGCTGCTGAATaGGACTGTCTTTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAWHAAE*DCLFPF
Trigger: GAACGGAAAAAGACAGTCTCATTCAGCAGCATGCCA...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTTGCTTTTTCGGGTATaGCTTCCAAGCTCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDLLFRV*LPSSGV
Trigger: CACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGCGTCTCCATTCTGGTaGACTGTTTTTGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIASPFW*TVFVLC
Trigger: ACAAAGGACAAAAACAGTGCACCAGAATGGAGACGC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGACACCACCGCATTCTaGATGTTTTCTCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMDTTAF*MFSLRS
Trigger: AGATCTGAGAGAAAACATGCAGAATGCGGTGGTGTC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTCCGGCACAATTCCCTaGAGCTCCATTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRISGTIP*SSIVGY
Trigger: GTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTACTTCCTTGGTGCCTATaGTGTGCAAGTGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: LEKNSCLTSEVRDPVRQLLPWCL*CASVHG
Trigger: TCCATGAACACTTGCACAGCATAGGCACCAAGGAAG...TAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTACTTCCTTGGTGCCTATaGTGTGCAAGTGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVLPWCL*CASVHG
Trigger: TCCATGAACACTTGCACAGCATAGGCACCAAGGAAG...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAGCTTTGCTCCTCTTTTaGAGTCCTTCACTCAAATTT +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVALLLF*SPSLKF
Trigger: AAATTTGAGTGAAGGACTGCAAAAGAGGAGCAAAGC...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR GCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCCCACCTTAGGCTCTaGATGTCAGCATCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVSHLRL*MSASSK
Trigger: TTTACTGGATGCTGACATGCAGAGCCTAAGGTGGGA...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGGTCAGAAATGCCATTaGTGCGGAATATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMGQKCH*CGICLC
Trigger: ACACAGACATATTCCGCAGCAATGGCATTTCTGACC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGATGTTTGCAACATCTaGGGAGTTGGCAACCAAATC +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIDVCNI*GVGNQI
Trigger: GATTTGGTTGCCAACTCCGCAGATGTTGCAAACATC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTATCCAGTTTCATCGTTTaGTTTTTCGGGTATGACTTC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVSSFIV*FFGYDF
Trigger: GAAGTCATACCCGAAAAAGCAAACGATGAAACTGGA...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAGTTAAAGAGTTTATTTaGCTTCACACGCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVVKEFI*LHTQDC
Trigger: GCAATCCTGCGTGTGAAGGCAAATAAACTCTTTAAC...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATaGCACCAAAATCATCTAGAA +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIMAQQA*HQNHLE
Trigger: TTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCAT...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAGAGCTTCAGTCCAATTaGACATTCTCCTCGATGGCT +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVELQSN*TFSSMA
Trigger: AGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTC...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCTATCTGAGAGGTCATaGTGTGGCCTGTGTAAATTA +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVILSERS*CGLCKL
Trigger: TAATTTACACAGGCCACACCATGACCTCTCAGATAG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTTCACAGGCACATTATTaGGTTGCTCCATGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVISQAHY*VAPCSL
Trigger: AAGAGAACATGGAGCAACCCAATAATGTGCCTGTGA...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGATTTACAAAGTCCCCTaGATTTTCATTGGCGTACTT +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQIYKVP*IFIGVL
Trigger: AAGTACGCCAATGAAAATCCAGGGGACTTTGTAAAT...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTCCATCATCAGTCCTaGTGTCTGAAAGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHVHHQS*CLKVHG
Trigger: GCCATGAACTTTCAGACACCAGGACTGATGATGGAC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCACTCCCTCATGATGGCTaGCCGGAGGACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPLPHDG*PEDIAT
Trigger: TGTGGCTATGTCCTCCGGCCAGCCATCATGAGGGAG...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGAAGGGAATTGTGTACTaGCCGATGAATTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMKGIVY*PMNSSP
Trigger: TGGGGATGAATTCATCGGCCAGTACACAATTCCCTT...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTTAGTAATAGCCACGTaGACAAATAAAGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: MALQGPRGFREPVHLHSLLVIAT*TNKEAC
Trigger: ACATGCTTCTTTATTTGTCCACGTGGCTATTACTAA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTTAGTAATAGCCACGTaGACAAATAAAGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQLVIAT*TNKEAC
Trigger: ACATGCTTCTTTATTTGTCCACGTGGCTATTACTAA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGTTCATGGAATTCCATaGCTGCCTTCTGACAATGTA +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGVHGIP*LPSDNV
Trigger: TACATTGTCAGAAGGCAGCCATGGAATTCCATGAAC...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTACTGTGCAAGTGTTCATaGAATTCCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LEKNSCLTSEVRDPVRQLLCKCS*NSMAAF
Trigger: GAAGGCAGCCATGGAATTCCATGAACACTTGCACAG...TAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCACTGTGCAAGTGTTCATaGAATTCCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSALCKCS*NSMAAF
Trigger: GAAGGCAGCCATGGAATTCCATGAACACTTGCACAG...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGAGTACTCATACCATTATaGGAGTCTGAGGCACAAAAA +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRVLIPL*ESEAQK
Trigger: TTTTTGTGCCTCAGACTCCCATAATGGTATGAGTAC...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTACAATCTTCAGATATCTaGTCAGAAATGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVQSSDI*SEMPLL
Trigger: CAGCAATGGCATTTCTGACCAGATATCTGAAGATTG...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTACAACATCTGCGGAGTTaGCAACCAAATCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVQHLRS*QPNPVT
Trigger: AGTCACTGGATTTGGTTGCCAACTCCGCAGATGTTG...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTAGAACCCAGAGACTCTaGCAACCCCATATAAGTAAA +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIRTQRL*QPHISK
Trigger: TTTACTTATATGGGGTTGCCAGAGTCTCTGGGTTCT...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTGGCTGCAGTCTCCGTTaGAAACCCCGCCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVGCSLR*KPRRCH
Trigger: ATGACAGCGGCGGGGTTTCCAACGGAGACTGCAGCC...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR TCA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGTTGCTTCATATCCTaGCAGACCTTCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLGCFIS*QTFLCS
Trigger: AGAACATAAGAAGGTCTGTCAGGATATGAAGCAACC...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGGTTGCTTCATATCCTaGCAGACCTTCTTATGTTCT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIGCFIS*QTFLCS
Trigger: AGAACATAAGAAGGTCTGTCAGGATATGAAGCAACC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAGAGGGACCTCGGAACTaGTCCTCTATTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVEGPRN*SSIKYV
Trigger: TACATACTTAATAGAGGATCAGTTCCGAGGTCCCTC...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTCTGCGGAAAACTATCTaGGAGGTCATGGTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRILRKTI*EVMVWP
Trigger: AGGCCACACCATGACCTCTCAGATAGTTTTCCGCAG...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGAGATAAGAGGATACTCTaGAGCAAAGAATGCATACTT +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRDKRIL*SKECIL
Trigger: AAGTATGCATTCTTTGCTTCAGAGTATCCTCTTATC...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTAGTTTCTTCATGTGCTaGACCATTACCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVISFFMC*TITFCC
Trigger: ACAACAGAAGGTAATGGTTCAGCACATGAAGAAACT...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTAGTTTCTTCATGTGCTaGACCATTACCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSSFFMC*TITFCC
Trigger: ACAACAGAAGGTAATGGTTCAGCACATGAAGAAACT...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAAGTTCTTTACAAAGCTaGAATCGCTTCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSSSLQS*NRFTGT
Trigger: TGTGCCTGTGAAGCGATTTCAGCTTTGTAAAGAACT...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGTTCTTTGAACTGAACTaGTTTGCAGATGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLFFELN*FADADQ
Trigger: CTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAA...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTCTTTTGTATTGGCGCTaGAGAAGGAGACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRILLYWR*RRRPPP
Trigger: GGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAAG...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGTTTCAATCAACGCCTTaGGGGACTGAATCATCATGT +
Preference number: 4 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLFQSTP*GTESSC
Trigger: ACATGATGATTCAGTCCCTCAAGGCGTTGATTGAAA...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAACCATTATGGGAGTCTaGGGCACAAAAATACTCCTC +
Preference number: 4 (lower is better)
Translates to: LEKNSCLTSEVRDPVRQLTIMGV*GTKILL
Trigger: GAGGAGTATTTTTGTGCCTCAGACTCCCATAATGGT...TAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGGCAACCAAATCCAGTaGCTCATAATTCTCTCCATA +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIGNQIQ*LIILSI
Trigger: TATGGAGAGAATTATGAGTCACTGGATTTGGTTGCC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGGCAACCAAATCCAGTaGCTCATAATTCTCTCCATA +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMGNQIQ*LIILSI
Trigger: TATGGAGAGAATTATGAGTCACTGGATTTGGTTGCC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTTGCTTTTTCGGGTATaGCTTCCAAGCTCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRILLFRV*LPSSGV
Trigger: CACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATAGCAAATGTCCCATCTaGCTACAATTGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHSKCPI*LQLVLE
Trigger: CTCTAGGACCAATTGTAGTCAGATGGGACATTTGCT...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAGGCACATTATTGGGTTaGTCCATGTTCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVGTLLG*SMFSFP
Trigger: GGGAAAAGAGAACATGGAGCAACCCAATAATGTGCC...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGGCACATTATTGGGTTaGTCCATGTTCTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHGTLLG*SMFSFP
Trigger: GGGAAAAGAGAACATGGAGCAACCCAATAATGTGCC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATCAAACCTTCCTTGGTaGCTATGCTGTGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSASNLPW*LCCASV
Trigger: AACACTTGCACAGCATAGGCACCAAGGAAGGTTTGA...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTATTCTTCCAAATCACATaGAGTGTGAGGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LEKNSCLTSEVRDPVRQLFFQIT*SVREEK
Trigger: CTTCTCCTCCCTCACACTGCATGTGATTTGGAAGAA...TAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGACAATCACAAGTCATTaGTTTTATTCAGACGTAGGG +
Preference number: 4 (lower is better)
Translates to: SIPWGPADTFLPNHMQCETITSH*FYSDVG
Trigger: CCCTACGTCTGAATAAAAGCAATGACTTGTGATTGT...CTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCATCCCACCTTAGGCTCTaGATGTCAGCATCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPSHLRL*MSASSK
Trigger: TTTACTGGATGCTGACATGCAGAGCCTAAGGTGGGA...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGGTCAGAAATGCCATTaGTGCGGAATATGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHGQKCH*CGICLC
Trigger: ACACAGACATATTCCGCAGCAATGGCATTTCTGACC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGATGTTTGCAACATCTaGGGAGTTGGCAACCAAATC +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHDVCNI*GVGNQI
Trigger: GATTTGGTTGCCAACTCCGCAGATGTTGCAAACATC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATGCCACACCCTGTTCTaGCTCAAGAAACATCATAAG +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVCHTLF*LKKHHK
Trigger: CTTATGATGTTTCTTGAGGCAGAACAGGGTGTGGCA...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCCAGTTTCATCGTTTaGTTTTTCGGGTATGACTTC +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNSSFIV*FFGYDF
Trigger: GAAGTCATACCCGAAAAAGCAAACGATGAAACTGGA...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGGACCTTCTTATGTTCTaGATCGAATATATAACAGTC +
Preference number: 4 (lower is better)
Translates to: APSIPWGPADTFLPNHMQDLLMF*IEYITV
Trigger: GACTGTTATATATTCGATCCAGAACATAAGAAGGTC...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGAAAGATTCCTCAACATTaGGTGATGTTGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRKIPQH*VMLYRA
Trigger: AGCTCTATACAACATCACCCAATGTTGAGGAATCTT...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAAGATTCCTCAACATTaGGTGATGTTGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: HAWMLKTAKISTFHSLGAKIPQH*VMLYRA
Trigger: AGCTCTATACAACATCACCCAATGTTGAGGAATCTT...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCATCACAGGCACATTATTaGGTTGCTCCATGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSSQAHY*VAPCSL
Trigger: AAGAGAACATGGAGCAACCCAATAATGTGCCTGTGA...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGAGAGGATTCATGTTACTaGAATCAATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASREDSCY*NQFSLD
Trigger: GTCCAATGAGAATTGATTCCAGTAACATGAATCCTC...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGGAGGATTCATGTTACTaGAATCAATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: SIPWGPADTFLPNHMQCEEDSCY*NQFSLD
Trigger: GTCCAATGAGAATTGATTCCAGTAACATGAATCCTC...CTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTGGCACCTGATCCTTTaGGCTTGGGAAAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIWHLIL*AWESSA
Trigger: GGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGAGCTTTCATCAAAAATaGGAGCGTCTCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMSFHQK*ERLHSG
Trigger: ACCAGAATGGAGACGCTCCCATTTTTGATGAAAGCT...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAAAGATGCATATTCCCTaGATTTCTTCCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVKMHIP*ISSLFS
Trigger: TGAGAAAAGGGAAGAAATCCAGGGAATATGCATCTT...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGAAGATGCATATTCCCTaGATTTCTTCCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SIPWGPADTFLPNHMQCEKMHIP*ISSLFS
Trigger: TGAGAAAAGGGAAGAAATCCAGGGAATATGCATCTT...CTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCACAACATCTGCGGAGTTaGCAACCAAATCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPQHLRS*QPNPVT
Trigger: AGTCACTGGATTTGGTTGCCAACTCCGCAGATGTTG...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTGAAACAGCAGCAAAATaGATTTGTTTCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIETAAK*ICFRFS
Trigger: GGAGAACCTGAAACAAATCCATTTTGCTGCTGTTTC...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAAGTTTCTTCATGTGCTaGACCATTACCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSSFFMC*TITFCC
Trigger: ACAACAGAAGGTAATGGTTCAGCACATGAAGAAACT...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATTCCTCAACATTGGGTaGTGTTGTATAGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAFLNIG*CCIELV
Trigger: GACAAGCTCTATACAACATCACCCAATGTTGAGGAA...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCATACCCCAGAGCAATTTaGGGACAGCTTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPYPRAI*GQLLCF
Trigger: AAAGCAAAGAAGCTGTCCTCAAATTGCTCTGGGGTA...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAAGTTCTTTACAAAGCTaGAATCGCTTCACAGGCACA +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVSSLQS*NRFTGT
Trigger: TGTGCCTGTGAAGCGATTTCAGCTTTGTAAAGAACT...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTAATCAGTCCTGGTGTCTaGAAGTTCATGGCTACAATT +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVISPGV*KFMATI
Trigger: AATTGTAGCCATGAACTTTCAGACACCAGGACTGAT...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAGGGGCTGGGCATTCTTaGATACCTCATCCACGGTTT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIGAGHS*IPHPRF
Trigger: AAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCC...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTGGAGCGAACCTTTTTaGGTTCTGAACCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDWSEPF*VLNPQP
Trigger: TGGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATAATTCTCTCCATATATaGCGGAAAACGCACAATCTT +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNNSLHI*RKTHNL
Trigger: AAGATTGTGCGTTTTCCGTCATATATGGAGAGAATT...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAGACACCACCGCATTCTaGATGTTTTCTCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPDTTAF*MFSLRS
Trigger: AGATCTGAGAGAAAACATGCAGAATGCGGTGGTGTC...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAACCGCCAACATGCACTaGATGAGATTGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSITANMH*MRLATE
Trigger: CTCTGTGGCCAATCTCATGCAGTGCATGTTGGCGGT...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACC +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRISIVGY*SLRFRT
Trigger: GGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCATCAAACCTTCCTTGGTaGCTATGCTGTGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPSNLPW*LCCASV
Trigger: AACACTTGCACAGCATAGGCACCAAGGAAGGTTTGA...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTACAATCACAAGTCATTaGTTTTATTCAGACGTAGGG +
Preference number: 4 (lower is better)
Translates to: KTAKISTFHSLGASRHFSTITSH*FYSDVG
Trigger: CCCTACGTCTGAATAAAAGCAATGACTTGTGATTGT...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGCAGAAATGCCATTGCTaGGGAATATGTCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMQKCHC*GICLCF
Trigger: AAAACACAGACATATTCCGCAGCAATGGCATTTCTG...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGTCCAGTTTCATCGTTTaGTTTTTCGGGTATGACTTC +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMSSFIV*FFGYDF
Trigger: GAAGTCATACCCGAAAAAGCAAACGATGAAACTGGA...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGAGACCTTCTTATGTTCTaGATCGAATATATAACAGTC +
Preference number: 4 (lower is better)
Translates to: WMLKTAKISTFHSLGASRDLLMF*IEYITV
Trigger: GACTGTTATATATTCGATCCAGAACATAAGAAGGTC...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATCACAGGCACATTATTaGGTTGCTCCATGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSASQAHY*VAPCSL
Trigger: AAGAGAACATGGAGCAACCCAATAATGTGCCTGTGA...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATTCACAGGCACATTATTaGGTTGCTCCATGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHSQAHY*VAPCSL
Trigger: AAGAGAACATGGAGCAACCCAATAATGTGCCTGTGA...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTCTACCACATCACCTTTaGCACCTGATCCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRILPHHL*HLILWA
Trigger: AGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAG...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTAGTAATAGCCACGTaGACAAATAAAGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: MLKTAKISTFHSLGASRHLVIAT*TNKEAC
Trigger: ACATGCTTCTTTATTTGTCCACGTGGCTATTACTAA...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGAAGATGCATATTCCCTaGATTTCTTCCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGKMHIP*ISSLFS
Trigger: TGAGAAAAGGGAAGAAATCCAGGGAATATGCATCTT...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTAAGATGCATATTCCCTaGATTTCTTCCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIKMHIP*ISSLFS
Trigger: TGAGAAAAGGGAAGAAATCCAGGGAATATGCATCTT...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTCCCGTATAGGGGGCTaGGCATTCTTGAATACCTCA +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRISRIGG*AFLNTS
Trigger: TGAGGTATTCAAGAATGCCCAGCCCCCTATACGGGA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAGTACTCATACCATTATaGGAGTCTGAGGCACAAAAA +
Preference number: 4 (lower is better)
Translates to: KISTFHSLGASRHFSSKSVLIPL*ESEAQK
Trigger: TTTTTGTGCCTCAGACTCCCATAATGGTATGAGTAC...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATGTATTGTTTCCAGATTaGCTGCTTTTACATCATCTC +
Preference number: 4 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNVLFPD*LLLHHL
Trigger: GAGATGATGTAAAAGCAGCCAATCTGGAAACAATAC...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGATAAGAGGATACTCTaGAGCAAAGAATGCATACTT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMDKRIL*SKECIL
Trigger: AAGTATGCATTCTTTGCTTCAGAGTATCCTCTTATC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGATAAGAGGATACTCTaGAGCAAAGAATGCATACTT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIDKRIL*SKECIL
Trigger: AAGTATGCATTCTTTGCTTCAGAGTATCCTCTTATC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACCTGATTTGCAGATGCTaGCCAGTTCAGACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDLICRC*PVQTVL
Trigger: AAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAG...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCTTTTGTATTGGCGCTaGAGAAGGAGACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRLLYWR*RRRPPP
Trigger: GGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAAG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTCTGTTGGCATGCTGCTaGATGAGACTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRILLACC*MRLSFS
Trigger: GGAAAAAGACAGTCTCATTCAGCAGCATGCCAACAG...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGTTCACTAAACATTTGTaGAACCCAAGAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMFTKHL*NPRSPH
Trigger: ATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAA...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGTCAGTGGAGCTAGAGTaGATAATCTTTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMSVELE*IIFLHT
Trigger: AGTATGAAGAAAGATTATTCACTCTAGCTCCACTGA...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATATCTCTACCCATGTGCTaGCTCGGCATGTATCTTCAG +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSISLPMC*LGMYLQ
Trigger: CTGAAGATACATGCCGAGTCAGCACATGGGTAGAGA...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCATCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACC +
Preference number: 4 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPSIVGY*SLRFRT
Trigger: GGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGA...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAATATCTGGTCAGAAATaGCATTGCTGCGGAATATGT +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAISGQK*HCCGIC
Trigger: ACATATTCCGCAGCAATGGCATTTCTGACCAGATAT...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGAGGTTTCTGATACATTaGACAGCATTACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMRFLIH*TALHRV
Trigger: AACTCTGTGTAATGCTGTGCAATGTATCAGAAACCT...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCAGGTTTCTGATACATTaGACAGCATTACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIRFLIH*TALHRV
Trigger: AACTCTGTGTAATGCTGTGCAATGTATCAGAAACCT...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCATTCTCATTAGTGAGTaGAAAGCAAATGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIILISE*KANVPS
Trigger: AGATGGGACATTTGCTTTGCACTCACTAATGAGAAT...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTTAAAGAGTTTATTTaGCTTCACACGCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHVKEFI*LHTQDC
Trigger: GCAATCCTGCGTGTGAAGGCAAATAAACTCTTTAAC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATACCCCTGGATTTTCATTaGCGTACTTGCTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIPLDFH*RTCWQA
Trigger: TGCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGG...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCACTACCACATCACCTTTaGCACCTGATCCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPLPHHL*HLILWA
Trigger: AGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAG...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGTTAGTAATAGCCACGTaGACAAATAAAGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGLVIAT*TNKEAC
Trigger: ACATGCTTCTTTATTTGTCCACGTGGCTATTACTAA...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTTCCAAGCTCCGGCGTaGCTTCTGGACATCAGCATT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVFQAPA*LLDISI
Trigger: AATGCTGATGTCCAGAAGCCACGCCGGAGCTTGGAA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTTCTTTGAACTGAACTaGTTTGCAGATGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDFFELN*FADADQ
Trigger: CTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATCAGGCAGGTTGATTTaGAATTCAAAGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSASGRLI*NSKLSS
Trigger: TGATGAAAGCTTTGAATTTCAAATCAACCTGCCTGA...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCAGGCAGGTTGATTTaGAATTCAAAGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVSGRLI*NSKLSS
Trigger: TGATGAAAGCTTTGAATTTCAAATCAACCTGCCTGA...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCACACAGCTCCTTGAATaGCACCACCGCATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRTQLLE*HHRILH
Trigger: ATGCAGAATGCGGTGGTGTCATTCAAGGAGCTGTGT...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACC +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVSIVGY*SLRFRT
Trigger: GGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCACAGAAATGCCATTGCTaGGGAATATGTCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPQKCHC*GICLCF
Trigger: AAAACACAGACATATTCCGCAGCAATGGCATTTCTG...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGCTGACCCTCTTTGGATaGTTCATATTTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLLTLFG*FIFVNN
Trigger: ATTATTCACAAATATGAACCATCCAAAGAGGGTCAG...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CCA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGACCTTCTTATGTTCTaGATCGAATATATAACAGTC +
Preference number: 4 (lower is better)
Translates to: PDWLLLHHLYPCADSACIDLLMF*IEYITV
Trigger: GACTGTTATATATTCGATCCAGAACATAAGAAGGTC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATAAGATTCCTCAACATTaGGTGATGTTGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHKIPQH*VMLYRA
Trigger: AGCTCTATACAACATCACCCAATGTTGAGGAATCTT...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAAAGATTCCTCAACATTaGGTGATGTTGTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAKIPQH*VMLYRA
Trigger: AGCTCTATACAACATCACCCAATGTTGAGGAATCTT...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAATTTACAAAGTCCCCTaGATTTTCATTGGCGTACTT +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAIYKVP*IFIGVL
Trigger: AAGTACGCCAATGAAAATCCAGGGGACTTTGTAAAT...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAGTCCATCATCAGTCCTaGTGTCTGAAAGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIVHHQS*CLKVHG
Trigger: GCCATGAACTTTCAGACACCAGGACTGATGATGGAC...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTCTACCACATCACCTTTaGCACCTGATCCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVLPHHL*HLILWA
Trigger: AGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAG...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAGGAGCGTCTCCATTCTaGTGCACTGTTTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIGASPF*CTVFVL
Trigger: AAGGACAAAAACAGTGCACCAGAATGGAGACGCTCC...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACGTTCATGGAATTCCATaGCTGCCTTCTGACAATGTA +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDVHGIP*LPSDNV
Trigger: TACATTGTCAGAAGGCAGCCATGGAATTCCATGAAC...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACAGAACCCAGAGACTCTaGCAACCCCATATAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDRTQRL*QPHISK
Trigger: TTTACTTATATGGGGTTGCCAGAGTCTCTGGGTTCT...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATTGTTTCCAGATTaGCTGCTTTTACATCATCTC +
Preference number: 4 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHVLFPD*LLLHHL
Trigger: GAGATGATGTAAAAGCAGCCAATCTGGAAACAATAC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTTCCTCAACATTGGGTaGTGTTGTATAGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIFLNIG*CCIELV
Trigger: GACAAGCTCTATACAACATCACCCAATGTTGAGGAA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTATCAGTCCTGGTGTCTaGAAGTTCATGGCTACAATT +
Preference number: 4 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIISPGV*KFMATI
Trigger: AATTGTAGCCATGAACTTTCAGACACCAGGACTGAT...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTGGCATGCTGCTGAATaGGACTGTCTTTTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVWHAAE*DCLFPF
Trigger: GAACGGAAAAAGACAGTCTCATTCAGCAGCATGCCA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCTGTTGGCATGCTGCTaGATGAGACTGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRLLACC*MRLSFS
Trigger: GGAAAAAGACAGTCTCATTCAGCAGCATGCCAACAG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAAGCAAATGTCCCATCTaGCTACAATTGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSISKCPI*LQLVLE
Trigger: CTCTAGGACCAATTGTAGTCAGATGGGACATTTGCT...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATACCTCTGAGACATTTCTaGTCCTTCATCTTCGTCAGT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIPLRHF*SFIFVS
Trigger: ACTGACGAAGATGAAGGAGCAGAAATGTCTCAGAGG...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAGCGTCTCCATTCTGGTaGACTGTTTTTGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIASPFW*TVFVLC
Trigger: ACAAAGGACAAAAACAGTGCACCAGAATGGAGACGC...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAGACACCACCGCATTCTaGATGTTTTCTCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIDTTAF*MFSLRS
Trigger: AGATCTGAGAGAAAACATGCAGAATGCGGTGGTGTC...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCTTCCTTGGTGCCTATaGTGTGCAAGTGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRLPWCL*CASVHG
Trigger: TCCATGAACACTTGCACAGCATAGGCACCAAGGAAG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCATCAAACCTTCCTTGGTaGCTATGCTGTGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPSNLPW*LCCASV
Trigger: AACACTTGCACAGCATAGGCACCAAGGAAGGTTTGA...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAAGGTTTCTGATACATTaGACAGCATTACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPRFLIH*TALHRV
Trigger: AACTCTGTGTAATGCTGTGCAATGTATCAGAAACCT...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAATTCTCATTAGTGAGTaGAAAGCAAATGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPILISE*KANVPS
Trigger: AGATGGGACATTTGCTTTGCACTCACTAATGAGAAT...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACGTTAAAGAGTTTATTTaGCTTCACACGCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDVKEFI*LHTQDC
Trigger: GCAATCCTGCGTGTGAAGGCAAATAAACTCTTTAAC...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCACTGACCCTCTTTGGATaGTTCATATTTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: LFPDWLLLHHLYPCADSALTLFG*FIFVNN
Trigger: ATTATTCACAAATATGAACCATCCAAAGAGGGTCAG...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTACTGACCCTCTTTGGATaGTTCATATTTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVLTLFG*FIFVNN
Trigger: ATTATTCACAAATATGAACCATCCAAAGAGGGTCAG...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAGAGGATTCATGTTACTaGAATCAATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPEDSCY*NQFSLD
Trigger: GTCCAATGAGAATTGATTCCAGTAACATGAATCCTC...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATTAGTAATAGCCACGTaGACAAATAAAGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVLVIAT*TNKEAC
Trigger: ACATGCTTCTTTATTTGTCCACGTGGCTATTACTAA...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTCTGTGCAAGTGTTCATaGAATTCCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVLCKCS*NSMAAF
Trigger: GAAGGCAGCCATGGAATTCCATGAACACTTGCACAG...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACCAATCTTCAGATATCTaGTCAGAAATGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDQSSDI*SEMPLL
Trigger: CAGCAATGGCATTTCTGACCAGATATCTGAAGATTG...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCGAGGGACCTCGGAACTaGTCCTCTATTAAGTATGTA +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTREGPRN*SSIKYV
Trigger: TACATACTTAATAGAGGATCAGTTCCGAGGTCCCTC...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCTACCCCAGAGCAATTTaGGGACAGCTTCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRYPRAI*GQLLCF
Trigger: AAAGCAAAGAAGCTGTCCTCAAATTGCTCTGGGGTA...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTCTGATTTGCAGATGCTaGCCAGTTCAGACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVLICRC*PVQTVL
Trigger: AAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAG...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCTGATTTGCAGATGCTaGCCAGTTCAGACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRLICRC*PVQTVL
Trigger: AAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATATTCTTTGAACTGAACTaGTTTGCAGATGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIFFELN*FADADQ
Trigger: CTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAA...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTTCACTAAACATTTGTaGAACCCAAGAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDFTKHL*NPRSPH
Trigger: ATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCCTCTGAGACATTTCTaGTCCTTCATCTTCGTCAGT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRPLRHF*SFIFVS
Trigger: ACTGACGAAGATGAAGGAGCAGAAATGTCTCAGAGG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCCACAGTTTCCGTTCTaGCTAAACCAGCCAATATTC +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRPQFPF*LNQPIF
Trigger: GAATATTGGCTGGTTTAGGCAGAACGGAAACTGTGG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTGACACCACCGCATTCTaGATGTTTTCTCTCAGATCT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVDTTAF*MFSLRS
Trigger: AGATCTGAGAGAAAACATGCAGAATGCGGTGGTGTC...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCGATGTTTGCAACATCTaGGGAGTTGGCAACCAAATC +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRDVCNI*GVGNQI
Trigger: GATTTGGTTGCCAACTCCGCAGATGTTGCAAACATC...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAGACCTTCTTATGTTCTaGATCGAATATATAACAGTC +
Preference number: 4 (lower is better)
Translates to: NPSTYILFSNYGSASMPPDLLMF*IEYITV
Trigger: GACTGTTATATATTCGATCCAGAACATAAGAAGGTC...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTTCATGGAATTCCATaGCTGCCTTCTGACAATGTA +
Preference number: 4 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPVHGIP*LPSDNV
Trigger: TACATTGTCAGAAGGCAGCCATGGAATTCCATGAAC...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAAGTTTCTTCATGTGCTaGACCATTACCTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSISFFMC*TITFCC
Trigger: ACAACAGAAGGTAATGGTTCAGCACATGAAGAAACT...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCATCAGTCCTGGTGTCTaGAAGTTCATGGCTACAATT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRISPGV*KFMATI
Trigger: AATTGTAGCCATGAACTTTCAGACACCAGGACTGAT...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTTTCAATCAACGCCTTaGGGGACTGAATCATCATGT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVFQSTP*GTESSC
Trigger: ACATGATGATTCAGTCCCTCAAGGCGTTGATTGAAA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCTTTCAATCAACGCCTTaGGGGACTGAATCATCATGT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRFQSTP*GTESSC
Trigger: ACATGATGATTCAGTCCCTCAAGGCGTTGATTGAAA...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTGGCAACCAAATCCAGTaGCTCATAATTCTCTCCATA +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVGNQIQ*LIILSI
Trigger: TATGGAGAGAATTATGAGTCACTGGATTTGGTTGCC...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATATCTGGTCAGAAATaGCATTGCTGCGGAATATGT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIISGQK*HCCGIC
Trigger: ACATATTCCGCAGCAATGGCATTTCTGACCAGATAT...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACCTGACCCTCTTTGGATaGTTCATATTTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDLTLFG*FIFVNN
Trigger: ATTATTCACAAATATGAACCATCCAAAGAGGGTCAG...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGCTTTCATCAAAAATaGGAGCGTCTCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRSFHQK*ERLHSG
Trigger: ACCAGAATGGAGACGCTCCCATTTTTGATGAAAGCT...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATATCAGGCAGGTTGATTTaGAATTCAAAGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSISGRLI*NSKLSS
Trigger: TGATGAAAGCTTTGAATTTCAAATCAACCTGCCTGA...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCATCAGGCAGGTTGATTTaGAATTCAAAGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPSGRLI*NSKLSS
Trigger: TGATGAAAGCTTTGAATTTCAAATCAACCTGCCTGA...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR TCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTTCACTCAAATTTCCTaGGCAGCAACCACTGTAAAA +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVFTQIS*AATTVK
Trigger: TTTTACAGTGGTTGCTGCTCAGGAAATTTGAGTGAA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR TCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATATTCACTAAACATTTGTaGAACCCAAGAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIFTKHL*NPRSPH
Trigger: ATGAGGACTTCTTGGGTTTCACAAATGTTTAGTGAA...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCAGAAATGCCATTGCTaGGGAATATGTCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRQKCHC*GICLCF
Trigger: AAAACACAGACATATTCCGCAGCAATGGCATTTCTG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTCAGAAATGCCATTGCTaGGGAATATGTCTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVQKCHC*GICLCF
Trigger: AAAACACAGACATATTCCGCAGCAATGGCATTTCTG...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTCCAGTTTCATCGTTTaGTTTTTCGGGTATGACTTC +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVSSFIV*FFGYDF
Trigger: GAAGTCATACCCGAAAAAGCAAACGATGAAACTGGA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCTGTTTCCAGATTGGCTaGTTTTACATCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRCFQIG*FYIIST
Trigger: GGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAGAGGATTCATGTTACTaGAATCAATTCTCATTGGAC +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIEDSCY*NQFSLD
Trigger: GTCCAATGAGAATTGATTCCAGTAACATGAATCCTC...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAAAGATGCATATTCCCTaGATTTCTTCCCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIKMHIP*ISSLFS
Trigger: TGAGAAAAGGGAAGAAATCCAGGGAATATGCATCTT...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTCAATCTTCAGATATCTaGTCAGAAATGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVQSSDI*SEMPLL
Trigger: CAGCAATGGCATTTCTGACCAGATATCTGAAGATTG...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCCAATCTTCAGATATCTaGTCAGAAATGCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRQSSDI*SEMPLL
Trigger: CAGCAATGGCATTTCTGACCAGATATCTGAAGATTG...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTGAAACAGCAGCAAAATaGATTTGTTTCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVETAAK*ICFRFS
Trigger: GGAGAACCTGAAACAAATCCATTTTGCTGCTGTTTC...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR TCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTCAGTGGAGCTAGAGTaGATAATCTTTCTTCATACT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVSVELE*IIFLHT
Trigger: AGTATGAAGAAAGATTATTCACTCTAGCTCCACTGA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR GCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTATTCTCATTAGTGAGTaGAAAGCAAATGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVILISE*KANVPS
Trigger: AGATGGGACATTTGCTTTGCACTCACTAATGAGAAT...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATACTGACCCTCTTTGGATaGTTCATATTTGTGAATAAT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSILTLFG*FIFVNN
Trigger: ATTATTCACAAATATGAACCATCCAAAGAGGGTCAG...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATATTAGTAATAGCCACGTaGACAAATAAAGAAGCATGT +
Preference number: 4 (lower is better)
Translates to: AKQMSHLTTIGPRVINSILVIAT*TNKEAC
Trigger: ACATGCTTCTTTATTTGTCCACGTGGCTATTACTAA...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CCA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTGTATTGTTTCCAGATTaGCTGCTTTTACATCATCTC +
Preference number: 4 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVVLFPD*LLLHHL
Trigger: GAGATGATGTAAAAGCAGCCAATCTGGAAACAATAC...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACGGCAGGCCGCCCGGCTaGCTCTCCCGGGGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYGRPPG*LSRGRV
Trigger: TACCCTCCCCCGGGAGAGCAAGCCGGGCGGCCTGCC...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CAA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACGGCAGGCCGCCCGGCTaGCTCTCCCGGGGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDGRPPG*LSRGRV
Trigger: TACCCTCCCCCGGGAGAGCAAGCCGGGCGGCCTGCC...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS GCA 90 bp GTGCTCTTGAACAAGGCTGTGGAGAGGTGGCAGCGGTGTCTTCCCTaGCCGGTGATGGAGCACGTCACAGGGGAGCACTGCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VLLNKAVERWQRCLP*PVMEHVTGEHCCLL
Trigger: GAGAAGGCAGCAGTGCTCCCCTGTGACGTGCTCCATCACCGGGCAGGGAAGACACCGCTGCCACCTCTCCACAGCCTTGTTCAAGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS GCA 90 bp CGGTGTCTTCCCTGCCCGGTGATGGAGCACGTCACAGGGGAGCACTaGTGCCTTCTCTCTCGGGTCTGCTTTGCTCCTCTTTTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: RCLPCPVMEHVTGEH*CLLSRVCFAPLLQS
Trigger: GGACTGCAAAAGAGGAGCAAAGCAGACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGTGACGTGCTCCATCACCGGGCAGGGAAGACACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS GCA 90 bp TGTCTTCCCTGCCCGGTGATGGAGCACGTCACAGGGGAGCACTGCTaGCTTCTCTCTCGGGTCTGCTTTGCTCCTCTTTTGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: CLPCPVMEHVTGEHC*LLSRVCFAPLLQSF
Trigger: GAAGGACTGCAAAAGAGGAGCAAAGCAGACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGTGACGTGCTCCATCACCGGGCAGGGAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACTCCCCTGGATTTTCATaGGCGTACTTGCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYSPGFS*AYLLAS
Trigger: GCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGGA...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACCTGATCCTTTGGGCTaGGGAAAGTTCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: FSSMALQGPRGFREPVHLPDPLG*GKFCPL
Trigger: CAGTGGGCAGAACTTTCCCAAGCCCAAAGGATCAGG...TAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS GCA 90 bp TTCAGAACCTCCGGCACAATTCCCTGCAGCTCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACCACTAGGGGTGTGTTATCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: FRTSGTIPCSSIVGY*SLRFRTTRGVLSGP
Trigger: GGGGCCCGATAACACACCCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGAGGTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS CCA 90 bp TTGTACCATCAATTTCCAGTGCTCTTGAACAAGGCTGTGGAGAGGTaGCAGCGGTGTCTTCCCTGCCCGGTGATGGAGCACGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: LYHQFPVLLNKAVER*QRCLPCPVMEHVTG
Trigger: CCCTGTGACGTGCTCCATCACCGGGCAGGGAAGACACCGCTGCCACCTCTCCACAGCCTTGTTCAAGAGCACTGGAAATTGATGGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCCCTGATCCTTTGGGCTaGGGAAAGTTCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPPDPLG*GKFCPL
Trigger: CAGTGGGCAGAACTTTCCCAAGCCCAAAGGATCAGG...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCCCTGATCCTTTGGGCTaGGGAAAGTTCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: NCTFSSMALQGPRGFREPPDPLG*GKFCPL
Trigger: CAGTGGGCAGAACTTTCCCAAGCCCAAAGGATCAGG...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACTTGGAGCGAACCTTTTaGAGTTCTGAACCCTCAACC +
Preference number: 5 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYLERTF*SSEPST
Trigger: GGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCAA...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS CCA 90 bp TTTTGTATTGGCGCTGAAGAAGGAGACCTCCTCCCTCATGATGGCTaGCCGGAGGACATAGCCACAGTTTCCGTTCTGCCTAAACCAGCC +
Preference number: 5 (lower is better)
Translates to: FCIGAEEGDLLPHDG*PEDIATVSVLPKPA
Trigger: GGCTGGTTTAGGCAGAACGGAAACTGTGGCTATGTCCTCCGGCCAGCCATCATGAGGGAGGAGGTCTCCTTCTTCAGCGCCAATACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS-3UTR CAA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACAGGCACATTATTGGGTaGCTCCATGTTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYRHIIG*LHVLFS
Trigger: GGAAAAGAGAACATGGAGCAACCCAATAATGTGCCT...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTCCCCTGGATTTTCATaGGCGTACTTGCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: MALQGPRGFREPVHLHSLSPGFS*AYLLAS
Trigger: GCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGGA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACTCCCCTGGATTTTCATaGGCGTACTTGCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDSPGFS*AYLLAS
Trigger: GCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGGA...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTTGGCACCTGATCCTTaGGGCTTGGGAAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQLAPDP*GLGKFC
Trigger: GCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGGGCTGGGCATTCTaGAATACCTCATCCACGGTT +
Preference number: 5 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSGGWAF*NTSSTV
Trigger: AACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCC...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTCTCTCGGGTCTGCTTaGCTCCTCTTTTGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: MALQGPRGFREPVHLHSLSLGSA*LLFCSP
Trigger: AGGACTGCAAAAGAGGAGCAAAGCAGACCCGAGAGA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTTGGAGCGAACCTTTTaGAGTTCTGAACCCTCAACC +
Preference number: 5 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLLERTF*SSEPST
Trigger: GGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCAA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGAGGCTGCAGTCTCCGTaGGAAACCCCGCCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMRLQSP*ETPPLS
Trigger: TGACAGCGGCGGGGTTTCCAACGGAGACTGCAGCCT...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CAA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTTTCACAGGCACATTATaGGGTTGCTCCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLFTGTL*GCSMFS
Trigger: AGAGAACATGGAGCAACCCAATAATGTGCCTGTGAA...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYIHCFCP*FCTISR
Trigger: CCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTG...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GSFSPIAHSPRWLSKDPGHCFCP*FCTISR
Trigger: CCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTG...CCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCGGGGGCTGGGCATTCTaGAATACCTCATCCACGGTT +
Preference number: 5 (lower is better)
Translates to: HAWMLKTAKISTFHSLGAGGWAF*NTSSTV
Trigger: AACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCC...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCAATTTCCAGTGCTCTaGAACAAGGCTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDQFPVL*NKAVER
Trigger: CCTCTCCACAGCCTTGTTCAAGAGCACTGGAAATTG...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp TGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAAGACTTCCCCTGCCCAGGCACATTATTGGGTaGCTCCATGTTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CLTSEVRDPVRQLRLPLPRHIIG*LHVLFS
Trigger: GGAAAAGAGAACATGGAGCAACCCAATAATGTGCCT...GGGCAGGGGAAGTCTTAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp AATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCTTCACAGGCACATTATaGGGTTGCTCCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: NCTFSSMALQGPRGFREPFTGTL*GCSMFS
Trigger: AGAGAACATGGAGCAACCCAATAATGTGCCTGTGAA...GGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCTCCCCTGGATTTTCATaGGCGTACTTGCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: TAKISTFHSLGASRHFSSSPGFS*AYLLAS
Trigger: GCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGGA...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGACAGAGTCTTTTGTATaGGCGCTGAAGAAGGAGACC +
Preference number: 5 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQTESFV*ALKKET
Trigger: GGTCTCCTTCTTCAGCGCCAATACAAAAGACTCTGT...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTACAGAGTCTTTTGTATaGGCGCTGAAGAAGGAGACC +
Preference number: 5 (lower is better)
Translates to: MALQGPRGFREPVHLHSLTESFV*ALKKET
Trigger: GGTCTCCTTCTTCAGCGCCAATACAAAAGACTCTGT...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCTTGGCACCTGATCCTTaGGGCTTGGGAAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: HAWMLKTAKISTFHSLGALAPDP*GLGKFC
Trigger: GCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAA...GGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTATCTACCACATCACCTTaGGCACCTGATCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVSTTSP*APDPLG
Trigger: GCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAGA...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTGGGGGCTGGGCATTCTaGAATACCTCATCCACGGTT +
Preference number: 5 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIGGWAF*NTSSTV
Trigger: AACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCC...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTTGGAGCGAACCTTTTaGAGTTCTGAACCCTCAACC +
Preference number: 5 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQLERTF*SSEPST
Trigger: GGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCAA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTGAGGTTTCTGATACATaGCACAGCATTACACAGAGT +
Preference number: 5 (lower is better)
Translates to: ILLDGSPRTPGIQGTRPLEVSDT*HSITQS
Trigger: ACTCTGTGTAATGCTGTGCAATGTATCAGAAACCTC...AAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTACCTCGGTACCAGCTTaGTCCTTTGATTTATGCAAT +
Preference number: 5 (lower is better)
Translates to: PRWLSKDPGDSGNPSTYITSVPA*SFDLCN
Trigger: ATTGCATAAATCAAAGGACAAAGCTGGTACCGAGGT...AATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS GCA 90 bp CTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATaGAGTGTGAGGGAGGAGAAGGAGGAGGGTACTCATACCATTATG +
Preference number: 5 (lower is better)
Translates to: LPFPGGQQTLFFQIT*SVREEKEEGTHTIM
Trigger: CATAATGGTATGAGTACCCTCCTCCTTCTCCTCCCTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACAGGCACATTATTGGGTaGCTCCATGTTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDRHIIG*LHVLFS
Trigger: GGAAAAGAGAACATGGAGCAACCCAATAATGTGCCT...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTTCACAGGCACATTATaGGGTTGCTCCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: MALQGPRGFREPVHLHSLFTGTL*GCSMFS
Trigger: AGAGAACATGGAGCAACCCAATAATGTGCCTGTGAA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACCTGATCCTTTGGGCTaGGGAAAGTTCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: KISTFHSLGASRHFSSKSPDPLG*GKFCPL
Trigger: CAGTGGGCAGAACTTTCCCAAGCCCAAAGGATCAGG...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCTACCACATCACCTTaGGCACCTGATCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNSTTSP*APDPLG
Trigger: GCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAGA...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTTCTACCACATCACCTTaGGCACCTGATCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVISTTSP*APDPLG
Trigger: GCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAGA...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGGGGGCTGGGCATTCTaGAATACCTCATCCACGGTT +
Preference number: 5 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMGGWAF*NTSSTV
Trigger: AACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACTGTATTGTTTCCAGATaGGCTGCTTTTACATCATCT +
Preference number: 5 (lower is better)
Translates to: SPRWLSKDPGDSGNPSTYCIVSR*AAFTSS
Trigger: AGATGATGTAAAAGCAGCCAATCTGGAAACAATACA...GTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGGTAATGAGACAGAGGTaGCTTCATATCCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: APSIPWGPADTFLPNHMQVMRQR*LHILTD
Trigger: GTCTGTCAGGATATGAAGCAACCTCTGTCTCATTAC...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTAATGAGACAGAGGTaGCTTCATATCCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSVMRQR*LHILTD
Trigger: GTCTGTCAGGATATGAAGCAACCTCTGTCTCATTAC...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGAGGCACATTATTGGGTaGCTCCATGTTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: APSIPWGPADTFLPNHMQRHIIG*LHVLFS
Trigger: GGAAAAGAGAACATGGAGCAACCCAATAATGTGCCT...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCATTCACAGGCACATTATaGGGTTGCTCCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSFTGTL*GCSMFS
Trigger: AGAGAACATGGAGCAACCCAATAATGTGCCTGTGAA...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTTTTCATTGGCGTACTaGCTGGCAAGCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: SVQLHILLDGSPRTPGIQFSLAY*LASTSL
Trigger: TAATGAAGTGCTTGCCAGCAAGTACGCCAATGAAAA...CTGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTTTTCATTGGCGTACTaGCTGGCAAGCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: MALQGPRGFREPVHLHSLFSLAY*LASTSL
Trigger: TAATGAAGTGCTTGCCAGCAAGTACGCCAATGAAAA...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCACAGAGTCTTTTGTATaGGCGCTGAAGAAGGAGACC +
Preference number: 5 (lower is better)
Translates to: TAKISTFHSLGASRHFSSTESFV*ALKKET
Trigger: GGTCTCCTTCTTCAGCGCCAATACAAAAGACTCTGT...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCACCTGATCCTTTGGGCTaGGGAAAGTTCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAPDPLG*GKFCPL
Trigger: CAGTGGGCAGAACTTTCCCAAGCCCAAAGGATCAGG...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCATTGGCACCTGATCCTTaGGGCTTGGGAAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KISTFHSLGASRHFSSKSLAPDP*GLGKFC
Trigger: GCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAA...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGTCTACCACATCACCTTaGGCACCTGATCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLSTTSP*APDPLG
Trigger: GCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAGA...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp GCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: APSIPWGPADTFLPNHMQHCFCP*FCTISR
Trigger: CCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTG...CTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCAATTTCCAGTGCTCTaGAACAAGGCTGTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIQFPVL*NKAVER
Trigger: CCTCTCCACAGCCTTGTTCAAGAGCACTGGAAATTG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp ATGGCTCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTGTTCCCTCTTCTGTTTaGTACCATCAATTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: MALQGPRGFREPVHLHSLVPSSV*YHQFPV
Trigger: CACTGGAAATTGATGGTACAAAACAGAAGAGGGAAC...AAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACGAGGTTTCTGATACATaGCACAGCATTACACAGAGT +
Preference number: 5 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDEVSDT*HSITQS
Trigger: ACTCTGTGTAATGCTGTGCAATGTATCAGAAACCTC...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGGAGCTTCAGTCCAATaGCACATTCTCCTCGATGGC +
Preference number: 5 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMGASVQ*HILLDG
Trigger: GCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGATTCACAGGCACATTATaGGGTTGCTCCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: WMLKTAKISTFHSLGASRFTGTL*GCSMFS
Trigger: AGAGAACATGGAGCAACCCAATAATGTGCCTGTGAA...TCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTCACAGGCACATTATaGGGTTGCTCCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: MLKTAKISTFHSLGASRHFTGTL*GCSMFS
Trigger: AGAGAACATGGAGCAACCCAATAATGTGCCTGTGAA...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATTGGCACCTGATCCTTaGGGCTTGGGAAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVLAPDP*GLGKFC
Trigger: GCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAA...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MLKTAKISTFHSLGASRHHCFCP*FCTISR
Trigger: CCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTG...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCACATGCAGTGTGAGCCACATGCTTGGATGTaGAAGACAGCAAAGATTAGC +
Preference number: 5 (lower is better)
Translates to: SIPWGPADTFLPNHMQCEPHAWM*KTAKIS
Trigger: GCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG...CTCACACTGCATGTGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACCCCGGGGATTCAGTTCCCTCTTCTGTTTaGTACCATCAATTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: FSPIAHSPRWLSKDPGDSVPSSV*YHQFPV
Trigger: CACTGGAAATTGATGGTACAAAACAGAAGAGGGAAC...TGAATCCCCGGGGTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTTGGTCAGAAATGCCATaGCTGCGGAATATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIWSEMP*LRNMSV
Trigger: CACAGACATATTCCGCAGCAATGGCATTTCTGACCA...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAGCAACATCTGCGGAGTaGGCAACCAAATCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAATSAE*ATKSSD
Trigger: GTCACTGGATTTGGTTGCCAACTCCGCAGATGTTGC...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAGGAGCTTCAGTCCAATaGCACATTCTCCTCGATGGC +
Preference number: 5 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAGASVQ*HILLDG
Trigger: GCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCC...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAAGGCTGCAGTCTCCGTaGGAAACCCCGCCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIRLQSP*ETPPLS
Trigger: TGACAGCGGCGGGGTTTCCAACGGAGACTGCAGCCT...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS-3UTR CAA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTTTTGTACCATCCTaGATGATGCTGCTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: LFPDWLLLHHLYPCADSACFVPS*MMLLRR
Trigger: CCGCCGGAGCAGCATCATCAAGGATGGTACAAAACA...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS TCA 90 bp GTAAGTTTCCTCATTCTCCAGTTTCATCGTTTGCTTTTTCGGGTATaGCTTCCAAGCTCCGGCGTGGCTTCTGGACATCAGCATTTTCGG +
Preference number: 5 (lower is better)
Translates to: VSFLILQFHRLLFRV*LPSSGVASGHQHFR
Trigger: CCGAAAATGCTGATGTCCAGAAGCCACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAAACGATGAAACTGGAGAATGAGGAAACTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp ATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCATTGGCGTACTaGCTGGCAAGCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: MLKTAKISTFHSLGASRHFSLAY*LASTSL
Trigger: TAATGAAGTGCTTGCCAGCAAGTACGCCAATGAAAA...GTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCACAGAGTCTTTTGTATaGGCGCTGAAGAAGGAGACC +
Preference number: 5 (lower is better)
Translates to: PDWLLLHHLYPCADSACITESFV*ALKKET
Trigger: GGTCTCCTTCTTCAGCGCCAATACAAAAGACTCTGT...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCATTGGCACCTGATCCTTaGGGCTTGGGAAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: NPSTYILFSNYGSASMPPLAPDP*GLGKFC
Trigger: GCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAA...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACGGGGGCTGGGCATTCTaGAATACCTCATCCACGGTT +
Preference number: 5 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDGGWAF*NTSSTV
Trigger: AACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCC...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGCCACATGCTTGGATGTaGAAGACAGCAAAGATTAGC +
Preference number: 5 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGPHAWM*KTAKIS
Trigger: GCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACGATTTAATGTCAATCTaGGCTTTCTCAGAATCCTTC +
Preference number: 5 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDDLMSI*AFSESF
Trigger: GAAGGATTCTGAGAAAGCCAAGATTGACATTAAATC...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CAGCCAGGGAGCTTCAGTCCAATTGCACATTCTCCTCGATGGCTCTCCAAGGACGTTTTTAAACCAGGATaGAGGTTTCTGATACATTGC +
Preference number: 5 (lower is better)
Translates to: QPGSFSPIAHSPRWLSKDVFKPG*RFLIHC
Trigger: GCAATGTATCAGAAACCTCAATCCTGGTTTAAAAAC...GTCCTTGGAGAGCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCCCTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCGTAATGAGACAGAGGTaGCTTCATATCCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: PDWLLLHHLYPCADSACIVMRQR*LHILTD
Trigger: GTCTGTCAGGATATGAAGCAACCTCTGTCTCATTAC...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGCAACATTGGGTGATGTaGTATAGAGCTTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGQHWVM*YRACLL
Trigger: TAGGAGACAAGCTCTATACAACATCACCCAATGTTG...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCAACATTGGGTGATGTaGTATAGAGCTTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIQHWVM*YRACLL
Trigger: TAGGAGACAAGCTCTATACAACATCACCCAATGTTG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTTTTCATTGGCGTACTaGCTGGCAAGCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: KTAKISTFHSLGASRHFSFSLAY*LASTSL
Trigger: TAATGAAGTGCTTGCCAGCAAGTACGCCAATGAAAA...AGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTTTTCATTGGCGTACTaGCTGGCAAGCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNFSLAY*LASTSL
Trigger: TAATGAAGTGCTTGCCAGCAAGTACGCCAATGAAAA...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTCCTGATCCTTTGGGCTaGGGAAAGTTCTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIPDPLG*GKFCPL
Trigger: CAGTGGGCAGAACTTTCCCAAGCCCAAAGGATCAGG...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTTGGCACCTGATCCTTaGGGCTTGGGAAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDLAPDP*GLGKFC
Trigger: GCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTCTACCACATCACCTTaGGCACCTGATCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDSTTSP*APDPLG
Trigger: GCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAGA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TGGCCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGTAATGGCCACATGCTaGGATGTTGAAGACAGCAAA +
Preference number: 5 (lower is better)
Translates to: WPHAWMLKTAKISTFHSLVMATC*DVEDSK
Trigger: TTTGCTGTCTTCAACATCCAAGCATGTGGCCATTAC...CAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTCTCTCGGGTCTGCTTaGCTCCTCTTTTGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDSLGSA*LLFCSP
Trigger: AGGACTGCAAAAGAGGAGCAAAGCAGACCCGAGAGA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp TCTCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTACCTGTTCTCACTTCCTaGATGGATTTAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: SPRTPGIQGTRPLTFSLVPVLTS*MDLMSI
Trigger: GATTGACATTAAATCCATCAAGGAAGTGAGAACAGG...TACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATGAGGTTTCTGATACATaGCACAGCATTACACAGAGT +
Preference number: 5 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNEVSDT*HSITQS
Trigger: ACTCTGTGTAATGCTGTGCAATGTATCAGAAACCTC...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTACCTCGGTACCAGCTTaGTCCTTTGATTTATGCAAT +
Preference number: 5 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVITSVPA*SFDLCN
Trigger: ATTGCATAAATCAAAGGACAAAGCTGGTACCGAGGT...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS TCA 90 bp CGGGTCTGCTTTGCTCCTCTTTTGCAGTCCTTCACTCAAATTTCCTaGGCAGCAACCACTGTAAAATACTCCGGCTGTCCAATAATACTT +
Preference number: 5 (lower is better)
Translates to: RVCFAPLLQSFTQIS*AATTVKYSGCPIIL
Trigger: AAGTATTATTGGACAGCCGGAGTATTTTACAGTGGTTGCTGCTCAGGAAATTTGAGTGAAGGACTGCAAAAGAGGAGCAAAGCAGACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS-3UTR CAA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCCAACATTGGGTGATGTaGTATAGAGCTTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: PDWLLLHHLYPCADSACIQHWVM*YRACLL
Trigger: TAGGAGACAAGCTCTATACAACATCACCCAATGTTG...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGCAACATTGGGTGATGTaGTATAGAGCTTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMQHWVM*YRACLL
Trigger: TAGGAGACAAGCTCTATACAACATCACCCAATGTTG...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAAGGCACATTATTGGGTaGCTCCATGTTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LFPDWLLLHHLYPCADSARHIIG*LHVLFS
Trigger: GGAAAAGAGAACATGGAGCAACCCAATAATGTGCCT...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAACAGAGTCTTTTGTATaGGCGCTGAAGAAGGAGACC +
Preference number: 5 (lower is better)
Translates to: NPSTYILFSNYGSASMPPTESFV*ALKKET
Trigger: GGTCTCCTTCTTCAGCGCCAATACAAAAGACTCTGT...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGGGGGCTGGGCATTCTaGAATACCTCATCCACGGTT +
Preference number: 5 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPGGWAF*NTSSTV
Trigger: AACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCC...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAGTGCGGCAGCTAGTAATGGCCACATGCTaGGATGTTGAAGACAGCAAA +
Preference number: 5 (lower is better)
Translates to: LEKNSCLTSEVRDPVRQLVMATC*DVEDSK
Trigger: TTTGCTGTCTTCAACATCCAAGCATGTGGCCATTAC...TAGCTGCCGCACTGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp ACAGCAAAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAACAATCACAAGTCATaGCTTTTATTCAGACGTAGG +
Preference number: 5 (lower is better)
Translates to: TAKISTFHSLGASRHFSSNNHKS*LLFRRR
Trigger: CCTACGTCTGAATAAAAGCAATGACTTGTGATTGTT...GGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTTTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTCCTGTTCTCACTTCCTaGATGGATTTAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: PRTPGIQGTRPLTFSLVIPVLTS*MDLMSI
Trigger: GATTGACATTAAATCCATCAAGGAAGTGAGAACAGG...AATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTGGAGCTTCAGTCCAATaGCACATTCTCCTCGATGGC +
Preference number: 5 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIGASVQ*HILLDG
Trigger: GCCATCGAGGAGAATGTGCAATTGGACTGAAGCTCC...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS GCA 90 bp AATGGGAGCGTCTCCATTCTGGTGCACTGTTTTTGTCCTTTGTTCTaGACAATCAGCAGGGATTCCATGGATTTCAACATAGACATAAGG +
Preference number: 5 (lower is better)
Translates to: NGSVSILVHCFCPLF*TISRDSMDFNIDIR
Trigger: CCTTATGTCTATGTTGAAATCCATGGAATCCCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTGCACCAGAATGGAGACGCTCCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS-3UTR CAA 90 bp CCACATGCTTGGATGTTGAAGACAGCAAAGATTAGCACCTTCCATTCCCTGGGGAACCATTACCTTCTGTaGTTTAATGGAACAGTGGTT +
Preference number: 5 (lower is better)
Translates to: PHAWMLKTAKISTFHSLGNHYLL*FNGTVV
Trigger: AACCACTGTTCCATTAAACAACAGAAGGTAATGGTT...CCCCAGGGAATGGAAGGTGCTAATCTTTGCTGTCTTCAACATCCAAGCATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCATCTACCACATCACCTTaGGCACCTGATCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPSTTSP*APDPLG
Trigger: GCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAGA...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp TCCAAGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATGATTTAATGTCAATCTaGGCTTTCTCAGAATCCTTC +
Preference number: 5 (lower is better)
Translates to: SKDPGDSGNPSTYILFSNDLMSI*AFSESF
Trigger: GAAGGATTCTGAGAAAGCCAAGATTGACATTAAATC...ATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACTGGTCAGAAATGCCATaGCTGCGGAATATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDWSEMP*LRNMSV
Trigger: CACAGACATATTCCGCAGCAATGGCATTTCTGACCA...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAGCAACATCTGCGGAGTaGGCAACCAAATCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIATSAE*ATKSSD
Trigger: GTCACTGGATTTGGTTGCCAACTCCGCAGATGTTGC...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS TCA 90 bp CTGACAGACCTTCTTATGTTCTGGATCGAATATATAACAGTCAGGTaGCATAAGGTAATTAGTGAACCCGTCTATGGAGAGCCAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LTDLLMFWIEYITVR*HKVISEPVYGEPAL
Trigger: AAGGGCTGGCTCTCCATAGACGGGTTCACTAATTACCTTATGTCACCTGACTGTTATATATTCGATCCAGAACATAAGAAGGTCTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS TCA 90 bp ACTGATTTGCAGATGCTGACCAGTTCAGACAGTTCTTTACAAAGCTaGAATCGCTTCACAGGCACATTATTGGGTTGCTCCATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TDLQMLTSSDSSLQS*NRFTGTLLGCSMFS
Trigger: AGAGAACATGGAGCAACCCAATAATGTGCCTGTGAAGCGATTTCAGCTTTGTAAAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS-3UTR CAA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCACAACATTGGGTGATGTaGTATAGAGCTTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: NPSTYILFSNYGSASMPPQHWVM*YRACLL
Trigger: TAGGAGACAAGCTCTATACAACATCACCCAATGTTG...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCATTTTCATTGGCGTACTaGCTGGCAAGCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: NPSTYILFSNYGSASMPPFSLAY*LASTSL
Trigger: TAATGAAGTGCTTGCCAGCAAGTACGCCAATGAAAA...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTTCCCCTGGATTTTCATaGGCGTACTTGCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVSPGFS*AYLLAS
Trigger: GCTTGCCAGCAAGTACGCCAATGAAAATCCAGGGGA...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AAGATTAGCACCTTCCATTCCCTGGGGGCCAGCAGACACTTTTCTTCCAAATCAAACAATCACAAGTCATaGCTTTTATTCAGACGTAGG +
Preference number: 5 (lower is better)
Translates to: KISTFHSLGASRHFSSKSNNHKS*LLFRRR
Trigger: CCTACGTCTGAATAAAAGCAATGACTTGTGATTGTT...TGATTTGGAAGAAAAGTGTCTGCTGGCCCCCAGGGAATGGAAGGTGCTAATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTTGGAGCGAACCTTTTaGAGTTCTGAACCCTCAACC +
Preference number: 5 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRILERTF*SSEPST
Trigger: GGTTGAGGGTTCAGAACTCAAAAAGGTTCGCTCCAA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AGGACCCCGGGGATTCAGGGAACCCGTCCACTTACATTCTCTTTAGTAATTATGGATTTAATGTCAATCTaGGCTTTCTCAGAATCCTTC +
Preference number: 5 (lower is better)
Translates to: RTPGIQGTRPLTFSLVIMDLMSI*AFSESF
Trigger: GAAGGATTCTGAGAAAGCCAAGATTGACATTAAATC...CATAATTACTAAAGAGAATGTAAGTGGACGGGTTCCCTGAATCCCCGGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTGGTCAGAAATGCCATaGCTGCGGAATATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIWSEMP*LRNMSV
Trigger: CACAGACATATTCCGCAGCAATGGCATTTCTGACCA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCGCAACATCTGCGGAGTaGGCAACCAAATCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRATSAE*ATKSSD
Trigger: GTCACTGGATTTGGTTGCCAACTCCGCAGATGTTGC...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTGCAACATCTGCGGAGTaGGCAACCAAATCCAGTGAC +
Preference number: 5 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVATSAE*ATKSSD
Trigger: GTCACTGGATTTGGTTGCCAACTCCGCAGATGTTGC...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATCTGTATTGTTTCCAGATaGGCTGCTTTTACATCATCT +
Preference number: 5 (lower is better)
Translates to: PDWLLLHHLYPCADSACICIVSR*AAFTSS
Trigger: AGATGATGTAAAAGCAGCCAATCTGGAAACAATACA...GATACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCTGTTTTGTACCATCCTaGATGATGCTGCTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRCFVPS*MMLLRR
Trigger: CCGCCGGAGCAGCATCATCAAGGATGGTACAAAACA...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS TCA 90 bp CGGAGTTGGCAACCAAATCCAGTGACTCATAATTCTCTCCATATATaGCGGAAAACGCACAATCTTCAGATATCTGGTCAGAAATGCCAT +
Preference number: 5 (lower is better)
Translates to: RSWQPNPVTHNSLHI*RKTHNLQISGQKCH
Trigger: ATGGCATTTCTGACCAGATATCTGAAGATTGTGCGTTTTCCGTCATATATGGAGAGAATTATGAGTCACTGGATTTGGTTGCCAACTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432376.5
ENST00000460467.1
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639559.1
CDS-3UTR CAA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCAACAGAGTCTTTTGTATaGGCGCTGAAGAAGGAGACC +
Preference number: 5 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPTESFV*ALKKET
Trigger: GGTCTCCTTCTTCAGCGCCAATACAAAAGACTCTGT...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIHCFCP*FCTISR
Trigger: CCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTG...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGATTTAATGTCAATCTaGGCTTTCTCAGAATCCTTC +
Preference number: 5 (lower is better)
Translates to: CFQIGCFYIISTHVLTRHDLMSI*AFSESF
Trigger: GAAGGATTCTGAGAAAGCCAAGATTGACATTAAATC...ATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCACCTGTTCTCACTTCCTaGATGGATTTAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: NPSTYILFSNYGSASMPPPVLTS*MDLMSI
Trigger: GATTGACATTAAATCCATCAAGGAAGTGAGAACAGG...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GCAAAGCAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATATGGTCAGAAATGCCATaGCTGCGGAATATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: AKQMSHLTTIGPRVINSIWSEMP*LRNMSV
Trigger: CACAGACATATTCCGCAGCAATGGCATTTCTGACCA...TATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTGCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTAGTAATTATGGCTCAGCAAGCATGCCACCAAAATCATCTAGAACCCAGAGACGAGGTTTCTGATACATaGCACAGCATTACACAGAGT +
Preference number: 5 (lower is better)
Translates to: LVIMAQQACHQNHLEPRDEVSDT*HSITQS
Trigger: ACTCTGTGTAATGCTGTGCAATGTATCAGAAACCTC...GTCTCTGGGTTCTAGATGATTTTGGTGGCATGCTTGCTGAGCCATAATTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTGTTTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCAGTTTTTAAACCAGGATaGAGGTTTCTGATACATTGC +
Preference number: 5 (lower is better)
Translates to: LFPDWLLLHHLYPCADSAVFKPG*RFLIHC
Trigger: GCAATGTATCAGAAACCTCAATCCTGGTTTAAAAAC...TGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TTCCAGATTGGCTGCTTTTACATCATCTCTACCCATGTGCTGACTCGGCATGTATGTATTGTTTCCAGATaGGCTGCTTTTACATCATCT +
Preference number: 5 (lower is better)
Translates to: FQIGCFYIISTHVLTRHVCIVSR*AAFTSS
Trigger: AGATGATGTAAAAGCAGCCAATCTGGAAACAATACA...TACATGCCGAGTCAGCACATGGGTAGAGATGATGTAAAAGCAGCCAATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS TCA 90 bp GTACTTCTGAACCTGAAACGACACCTGAAATTCTTTGAACTGAACTaGTTTGCAGATGCTGACCAGTTCAGACAGTTCTTTACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VLLNLKRHLKFFELN*FADADQFRQFFTKL
Trigger: CAGCTTTGTAAAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAATTTCAGGTGTCGTTTCAGGTTCAGAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS GCA 90 bp CATGGCTGCCTTCTGACAATGTACGATCTTTTCATATACAGCATCTaGATTTTCAATCAACGCCTTGAGGGACTGAATCATCATGTCATA +
Preference number: 5 (lower is better)
Translates to: HGCLLTMYDLFIYSI*IFNQRLEGLNHHVI
Trigger: TATGACATGATGATTCAGTCCCTCAAGGCGTTGATTGAAAATGCAGATGCTGTATATGAAAAGATCGTACATTGTCAGAAGGCAGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS CCA 90 bp TCCCTTTCAGGACATCTGGGGATGGTAGATAAGATTCCTCAACATTaGGTGATGTTGTATAGAGCTTGTCTCCTAAAAGTTTCTTCATGT +
Preference number: 5 (lower is better)
Translates to: SLSGHLGMVDKIPQH*VMLYRACLLKVSSC
Trigger: ACATGAAGAAACTTTTAGGAGACAAGCTCTATACAACATCACCCAATGTTGAGGAATCTTATCTACCATCCCCAGATGTCCTGAAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000460467.1
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639559.1
ENST00000639988.1
CDS-3UTR CAA 90 bp AACCCGTCCACTTACATTCTCTTTAGTAATTATGGCTCAGCAAGCATGCCACCAGTTTTTAAACCAGGATaGAGGTTTCTGATACATTGC +
Preference number: 5 (lower is better)
Translates to: NPSTYILFSNYGSASMPPVFKPG*RFLIHC
Trigger: GCAATGTATCAGAAACCTCAATCCTGGTTTAAAAAC...TGGTGGCATGCTTGCTGAGCCATAATTACTAAAGAGAATGTAAGTGGACGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCGTAATGAGACAGAGGTaGCTTCATATCCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRVMRQR*LHILTD
Trigger: GTCTGTCAGGATATGAAGCAACCTCTGTCTCATTAC...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TCCAACTATCTATTAGAGAAAAACAGTTGTCTTACTTCTGAGGTGAGGGATCCACAACATTGGGTGATGTaGTATAGAGCTTGTCTCCTA +
Preference number: 5 (lower is better)
Translates to: SNYLLEKNSCLTSEVRDPQHWVM*YRACLL
Trigger: TAGGAGACAAGCTCTATACAACATCACCCAATGTTG...TGGATCCCTCACCTCAGAAGTAAGACAACTGTTTTTCTCTAATAGATAGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419842.1
ENST00000639988.1
CDS-3UTR CAA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTAGGCACATTATTGGGTaGCTCCATGTTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVRHIIG*LHVLFS
Trigger: GGAAAAGAGAACATGGAGCAACCCAATAATGTGCCT...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVHCFCP*FCTISR
Trigger: CCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTG...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTCCTGTTCTCACTTCCTaGATGGATTTAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRIPVLTS*MDLMSI
Trigger: GATTGACATTAAATCCATCAAGGAAGTGAGAACAGG...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp CAAATGTCCCATCTGACTACAATTGGTCCTAGAGTTATAAACTCCATAATGGTTACCTCGGTACCAGCTTaGTCCTTTGATTTATGCAAT +
Preference number: 5 (lower is better)
Translates to: QMSHLTTIGPRVINSIMVTSVPA*SFDLCN
Trigger: ATTGCATAAATCAAAGGACAAAGCTGGTACCGAGGT...AACCATTATGGAGTTTATAACTCTAGGACCAATTGTAGTCAGATGGGACATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCACCTCGGTACCAGCTTaGTCCTTTGATTTATGCAAT +
Preference number: 5 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRTSVPA*SFDLCN
Trigger: ATTGCATAAATCAAAGGACAAAGCTGGTACCGAGGT...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp GGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCAGGATTTGTATTGTTTCCAGATaGGCTGCTTTTACATCATCT +
Preference number: 5 (lower is better)
Translates to: GQQYNCLLKSLFAFTRRICIVSR*AAFTSS
Trigger: AGATGATGTAAAAGCAGCCAATCTGGAAACAATACA...AATCCTGCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS-3UTR CAA 90 bp TATTTTGGCCAGCAATATAATTGCCTGTTAAAGAGTTTATTTGCCTTCACACGCGTTTTTAAACCAGGATaGAGGTTTCTGATACATTGC +
Preference number: 5 (lower is better)
Translates to: YFGQQYNCLLKSLFAFTRVFKPG*RFLIHC
Trigger: GCAATGTATCAGAAACCTCAATCCTGGTTTAAAAAC...GCGTGTGAAGGCAAATAAACTCTTTAACAGGCAATTATATTGCTGGCCAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS GCA 90 bp TCAATTTTGCTCGTTTTTAAACCAGGATTGAGGTTTCTGATACATTaGACAGCATTACACAGAGTTATATGTCCAAGGTTATCTACATCA +
Preference number: 5 (lower is better)
Translates to: SILLVFKPGLRFLIH*TALHRVICPRLSTS
Trigger: TGATGTAGATAACCTTGGACATATAACTCTGTGTAATGCTGTGCAATGTATCAGAAACCTCAATCCTGGTTTAAAAACGAGCAAAATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS CCA 72 bp CTTCGTCCCCGGACACGCCGAGGCTGCAGTCTCCGTTaGAAACCCCGCCGCTGTCATAGCGCGCCCGCCCGT +
Preference number: 6 (lower is better)
Translates to: LRPRTRRGCSLR*KPRRCHSAPAR
Trigger: ACGGGCGGGCGCGCTATGACAGCGGCGGGGTTTCCAACGGAGACTGCAGCCTCGGCGTGTCCGGGGACGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615277.5
ENST00000638466.2
CDS GCA 72 bp CCCTGCCCGGTGATGGAGCACGTCACAGGGGAGCACTaGTGCCTTCTCTCTCGGGTCTGCTTTGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PCPVMEHVTGEH*CLLSRVCFAPL
Trigger: AAGAGGAGCAAAGCAGACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGTGACGTGCTCCATCACCGGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS GCA 72 bp TGCCCGGTGATGGAGCACGTCACAGGGGAGCACTGCTaGCTTCTCTCTCGGGTCTGCTTTGCTCCTCTTTTG +
Preference number: 6 (lower is better)
Translates to: CPVMEHVTGEHC*LLSRVCFAPLL
Trigger: CAAAAGAGGAGCAAAGCAGACCCGAGAGAGAAGGCAGCAGTGCTCCCCTGTGACGTGCTCCATCACCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS CCA 72 bp CAATTTCCAGTGCTCTTGAACAAGGCTGTGGAGAGGTaGCAGCGGTGTCTTCCCTGCCCGGTGATGGAGCAC +
Preference number: 6 (lower is better)
Translates to: QFPVLLNKAVER*QRCLPCPVMEH
Trigger: GTGCTCCATCACCGGGCAGGGAAGACACCGCTGCCACCTCTCCACAGCCTTGTTCAAGAGCACTGGAAATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432376.5
ENST00000638327.1
CDS CAA 72 bp AGGCCACGAGGCCTTAGAAAGTGGACCCCTGTGTTCTaGTTCTGCCTTCAGCCACTTCCCCACTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: RPRGLRKWTPVF*FCLQPLPHSVL
Trigger: GAGCACAGAGTGGGGAAGTGGCTGAAGGCAGAACAAGAACACAGGGGTCCACTTTCTAAGGCCTCGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460467.1
ENST00000639559.1
CDS TCA 72 bp CAATTCCCTGCAGCTCCATTGTGGGGTACTGCTCGCTaGGATTTAGGACCACTAGGGGTGTGTTATCGGGCC +
Preference number: 6 (lower is better)
Translates to: QFPAAPLWGTAR*DLGPLGVCYRA
Trigger: GGCCCGATAACACACCCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGAGCTGCAGGGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS GCA 72 bp TCCGGCACAATTCCCTGCAGCTCCATTGTGGGGTACTaGTCGCTGAGATTTAGGACCACTAGGGGTGTGTTA +
Preference number: 6 (lower is better)
Translates to: SGTIPCSSIVGY*SLRFRTTRGVL
Trigger: TAACACACCCCTAGTGGTCCTAAATCTCAGCGAGCAGTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS GCA 72 bp GTTACGATCTTCTTCAGAACCTCCGGCACAATTCCCTaGAGCTCCATTGTGGGGTACTGCTCGCTGAGATTT +
Preference number: 6 (lower is better)
Translates to: VTIFFRTSGTIP*SSIVGYCSLRF
Trigger: AAATCTCAGCGAGCAGTACCCCACAATGGAGCTGCAGGGAATTGTGCCGGAGGTTCTGAAGAAGATCGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS CCA 72 bp GTTTGCTTTTTCGGGTATGACTTCCAAGCTCCGGCGTaGCTTCTGGACATCAGCATTTTCGGTGCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: VCFFGYDFQAPA*LLDISIFGAWF
Trigger: AAACCAGGCACCGAAAATGCTGATGTCCAGAAGCCACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS TCA 72 bp CTCATTCTCCAGTTTCATCGTTTGCTTTTTCGGGTATaGCTTCCAAGCTCCGGCGTGGCTTCTGGACATCAG +
Preference number: 6 (lower is better)
Translates to: LILQFHRLLFRV*LPSSGVASGHQ
Trigger: CTGATGTCCAGAAGCCACGCCGGAGCTTGGAAGTCATACCCGAAAAAGCAAACGATGAAACTGGAGAATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS CAA 72 bp GGGAGCGTCTCCATTCTGGTGCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGGGATTCCATGGATTTC +
Preference number: 6 (lower is better)
Translates to: GSVSILVHCFCP*FCTISRDSMDF
Trigger: GAAATCCATGGAATCCCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTGCACCAGAATGGAGACGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS CAA 72 bp AGATCTGTGGCATCCCGTATAGGGGGCTGGGCATTCTaGAATACCTCATCCACGGTTTTAATCCACAGTGTT +
Preference number: 6 (lower is better)
Translates to: RSVASRIGGWAF*NTSSTVLIHSV
Trigger: AACACTGTGGATTAAAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCCTATACGGGATGCCACAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS GCA 72 bp GTTCCCTCTTCTGTTTTGTACCATCCCCATCTCCCTTaGCTCTTGGTTGGGATGACTCTGAGGCTTATTTTT +
Preference number: 6 (lower is better)
Translates to: VPSSVLYHPHLP*LLVGMTLRLIF
Trigger: AAAAATAAGCCTCAGAGTCATCCCAACCAAGAGGCAAGGGAGATGGGGATGGTACAAAACAGAAGAGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460467.1
ENST00000639559.1
CDS CCA 72 bp TTTCAACATAGACATAAGGATCTACCACATCACCTTTaGCACCTGATCCTTTGGGCTTGGGAAAGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: FQHRHKDLPHHL*HLILWAWESSA
Trigger: GGCAGAACTTTCCCAAGCCCAAAGGATCAGGTGCCAAAGGTGATGTGGTAGATCCTTATGTCTATGTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS CAA 72 bp CAAAAATGGGAGCGTCTCCATTCTGGTGCACTGTTTTaGTCCTTTGTTCTGCACAATCAGCAGGGATTCCAT +
Preference number: 6 (lower is better)
Translates to: QKWERLHSGALF*SFVLHNQQGFH
Trigger: ATGGAATCCCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTGCACCAGAATGGAGACGCTCCCATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS TCA 72 bp GTTTGCAACATCTGCGGAGTTGGCAACCAAATCCAGTaGCTCATAATTCTCTCCATATATGACGGAAAACGC +
Preference number: 6 (lower is better)
Translates to: VCNICGVGNQIQ*LIILSIYDGKR
Trigger: GCGTTTTCCGTCATATATGGAGAGAATTATGAGTCACTGGATTTGGTTGCCAACTCCGCAGATGTTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432376.5
ENST00000460467.1
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639559.1
CDS CAA 90 bp ATCAAAAATGGGAGCGTCTCCATTCTGGTGCACTGTTTTTGTCCTTaGTTCTGCACAATCAGCAGGGATTCCATGGATTTCAACATAGAC +
Preference number: 6 (lower is better)
Translates to: IKNGSVSILVHCFCP*FCTISRDSMDFNID
Trigger: GTCTATGTTGAAATCCATGGAATCCCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTGCACCAGAATGGAGACGCTCCCATTTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS GCA 72 bp GTCTCCATTCTGGTGCACTGTTTTTGTCCTTTGTTCTaGACAATCAGCAGGGATTCCATGGATTTCAACATA +
Preference number: 6 (lower is better)
Translates to: VSILVHCFCPLF*TISRDSMDFNI
Trigger: TATGTTGAAATCCATGGAATCCCTGCTGATTGTGCAGAACAAAGGACAAAAACAGTGCACCAGAATGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS CAA 72 bp CCTGTTCTCACTTCCTTGATGGATTTAATGTCAATCTaGGCTTTCTCAGAATCCTTCTTAGATGGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: PVLTSLMDLMSI*AFSESFLDGSH
Trigger: GTGGGAGCCATCTAAGAAGGATTCTGAGAAAGCCAAGATTGACATTAAATCCATCAAGGAAGTGAGAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000432376.5
ENST00000460467.1
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639559.1
CDS CAA 90 bp GGACATCTGGGGATGGTAGATAAGATTCCTCAACATTGGGTGATGTaGTATAGAGCTTGTCTCCTAAAAGTTTCTTCATGTGCTGAACCA +
Preference number: 6 (lower is better)
Translates to: GHLGMVDKIPQHWVM*YRACLLKVSSCAEP
Trigger: TGGTTCAGCACATGAAGAAACTTTTAGGAGACAAGCTCTATACAACATCACCCAATGTTGAGGAATCTTATCTACCATCCCCAGATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000460467.1
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639559.1
ENST00000639988.1
CDS GCA 72 bp CTTTTTGTAGTTTTCTTTCCTTCAAACCTTCCTTGGTaGCTATGCTGTGCAAGTGTTCATGGAATTCCATGG +
Preference number: 6 (lower is better)
Translates to: LFVVFFPSNLPW*LCCASVHGIPW
Trigger: CCATGGAATTCCATGAACACTTGCACAGCATAGGCACCAAGGAAGGTTTGAAGGAAAGAAAACTACAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS GCA 72 bp GCTTATTTCCTCATTTATATGTGCCACACCCTGTTCTaGCTCAAGAAACATCATAAGGTCCTTGGTATCAAG +
Preference number: 6 (lower is better)
Translates to: AYFLIYMCHTLF*LKKHHKVLGIK
Trigger: CTTGATACCAAGGACCTTATGATGTTTCTTGAGGCAGAACAGGGTGTGGCACATATAAATGAGGAAATAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS TCA 72 bp AACCTGAAACGACACCTGAAATTCTTTGAACTGAACTaGTTTGCAGATGCTGACCAGTTCAGACAGTTCTTT +
Preference number: 6 (lower is better)
Translates to: NLKRHLKFFELN*FADADQFRQFF
Trigger: AAAGAACTGTCTGAACTGGTCAGCATCTGCAAATCAGTTCAGTTCAAAGAATTTCAGGTGTCGTTTCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS TCA 72 bp CAACCAAATCCAGTGACTCATAATTCTCTCCATATATaGCGGAAAACGCACAATCTTCAGATATCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: QPNPVTHNSLHI*RKTHNLQISGQ
Trigger: CTGACCAGATATCTGAAGATTGTGCGTTTTCCGTCATATATGGAGAGAATTATGAGTCACTGGATTTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000432376.5
ENST00000460467.1
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639559.1
CDS CAA 72 bp CATCAGTCCTGGTGTCTGAAAGTTCATGGCTACAATTaGGCAACCACATTTCCAAAAATCTTGAGGATTCAT +
Preference number: 6 (lower is better)
Translates to: HQSWCLKVHGYN*ATTFPKILRIH
Trigger: ATGAATCCTCAAGATTTTTGGAAATGTGGTTGCCAAATTGTAGCCATGAACTTTCAGACACCAGGACTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS TCA 72 bp CTTCTTATGTTCTGGATCGAATATATAACAGTCAGGTaGCATAAGGTAATTAGTGAACCCGTCTATGGAGAG +
Preference number: 6 (lower is better)
Translates to: LLMFWIEYITVR*HKVISEPVYGE
Trigger: CTCTCCATAGACGGGTTCACTAATTACCTTATGTCACCTGACTGTTATATATTCGATCCAGAACATAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419842.1
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
ENST00000639988.1
CDS CAA 90 bp TTTGTGACCTCGGTACCAGCTTTGTCCTTTGATTTATGCAATTCTTaGAACTTAAGCTCAATTTTGCTCGTTTTTAAACCAGGATTGAGG +
Preference number: 6 (lower is better)
Translates to: FVTSVPALSFDLCNS*NLSSILLVFKPGLR
Trigger: CCTCAATCCTGGTTTAAAAACGAGCAAAATTGAGCTTAAGTTCAAAGAATTGCATAAATCAAAGGACAAAGCTGGTACCGAGGTCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS CAA 72 bp ATTCGTTTTTCAGCTTCTACTGCATTCCCTTTGAGTTaGGAGCATAGAATCCAGTTATATCAGAGTCTGTAT +
Preference number: 6 (lower is better)
Translates to: IRFSASTAFPLS*EHRIQLYQSLY
Trigger: ATACAGACTCTGATATAACTGGATTCTATGCTCCAAACTCAAAGGGAATGCAGTAGAAGCTGAAAAACGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460467.1
ENST00000639559.1
CDS CAA 72 bp TCAATAAATTCTTCCTTTGTGACCTCGGTACCAGCTTaGTCCTTTGATTTATGCAATTCTTTGAACTTAAGC +
Preference number: 6 (lower is better)
Translates to: SINSSFVTSVPA*SFDLCNSLNLS
Trigger: GCTTAAGTTCAAAGAATTGCATAAATCAAAGGACAAAGCTGGTACCGAGGTCACAAAGGAAGAATTTATTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2
CDS CAA 72 bp TCGGTACCAGCTTTGTCCTTTGATTTATGCAATTCTTaGAACTTAAGCTCAATTTTGCTCGTTTTTAAACCA +
Preference number: 6 (lower is better)
Translates to: SVPALSFDLCNS*NLSSILLVFKP
Trigger: TGGTTTAAAAACGAGCAAAATTGAGCTTAAGTTCAAAGAATTGCATAAATCAAAGGACAAAGCTGGTACCGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000432376.5
ENST00000615277.5
ENST00000638327.1
ENST00000638466.2