RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000114805

Ensembl transcript IDs: ENST00000334686.6, ENST00000340059.11, ENST00000447496.6, ENST00000460012.7, ENST00000469040.1, ENST00000494598.5

Found 1008 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCAACGTGGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATaGCCCGGCCTTCAAGGCCACCCCCTTTCGTGTTCTTCAGGTAGC +
Preference number: 1 (lower is better)
Translates to: GQRGHSEEPCMPPLG*PGLQGHPLSCSSGS
Trigger: GCTACCTGAAGAACACGAAAGGGGGTGGCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCCACGTTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CCA 90 bp CACCCCCTTTCGTGTTCTTCAGGTAGCCTGCGATGTAGGAGCCGGTaGAGTGGCGATTCACTGCAGGGGTGGGTGCTGAGGGTTTGTTTC +
Preference number: 1 (lower is better)
Translates to: HPLSCSSGSLRCRSR*SGDSLQGWVLRVCF
Trigger: GAAACAAACCCTCAGCACCCACCCCTGCAGTGAATCGCCACTCCACCGGCTCCTACATCGCAGGCTACCTGAAGAACACGAAAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 90 bp ACTTGGCAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTaGTCGGTCAGGGCATCTATAGGCTCTAACGACTTTGTCTTCACA +
Preference number: 1 (lower is better)
Translates to: TWQLSSWSKDTSFRS*SVRASIGSNDFVFT
Trigger: TGTGAAGACAAAGTCGTTAGAGCCTATAGATGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 90 bp ATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAGCTCCGGAGATaGGCACAGGAAGGAAGACTTGGATTTTCCCTTGCAAAAACCATG +
Preference number: 1 (lower is better)
Translates to: MFGGLRTRECYQLRR*AQEGRLGFSLAKTM
Trigger: CATGGTTTTTGCAAGGGAAAATCCAAGTCTTCCTTCCTGTGCTCATCTCCGGAGCTGATAGCACTCTCGAGTTCTGAGACCACCAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 90 bp AAAGGAAGATGTGCCAACTGCTTGGGTACAGGGACATGCATATCTTaGGCACTAGATTGCTGGGGCACACAGGTCTGGAACATTTTTGCA +
Preference number: 1 (lower is better)
Translates to: KGRCANCLGTGTCIS*ALDCWGTQVWNIFA
Trigger: TGCAAAAATGTTCCAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAGTTGGCACATCTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 90 bp GGTTTTAGAGATGGGAGTGCAGGTAGTTTCATAAACTGTGTTCGTTaGATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAGCTCCGG +
Preference number: 1 (lower is better)
Translates to: GFRDGSAGSFINCVR*MFGGLRTRECYQLR
Trigger: CCGGAGCTGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATGAAACTACCTGCACTCCCATCTCTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CCA 90 bp GCAGAATTGCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATaGAGACGTCTGACAAAGAAAAGGATGTTGCAGCTCGGCCCTTAC +
Preference number: 1 (lower is better)
Translates to: AELQLNVGQVCQNRA*RRLTKKRMLQLGPY
Trigger: GTAAGGGCCGAGCTGCAACATCCTTTTCTTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGCAATTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 90 bp AATGGCCTGACATCACACTGGTATTATGAAGATGAGAAACAACTGTaGGAGCCTGATTGTTGGTCTCATCAAACTGGCCAATCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: NGLTSHWYYEDEKQL*EPDCWSHQTGQSGL
Trigger: CAGCCCTGATTGGCCAGTTTGATGAGACCAACAATCAGGCTCTCACAGTTGTTTCTCATCTTCATAATACCAGTGTGATGTCAGGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 90 bp CCCTTACCCCTATTACCTTCCAGGTTCTTAATTTCTAGGTTGCTATaGGAAAGGACGCTTCCTGACAAGATGCTTTTCCCTTCCACAAAG +
Preference number: 1 (lower is better)
Translates to: PLPLLPSRFLISRLL*ERTLPDKMLFPSTK
Trigger: CTTTGTGGAAGGGAAAAGCATCTTGTCAGGAAGCGTCCTTTCTCATAGCAACCTAGAAATTAAGAACCTGGAAGGTAATAGGGGTAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 90 bp TTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATTaGAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAAT +
Preference number: 1 (lower is better)
Translates to: FLILHQFPQGCSPQN*NREWDQLLHPPGSN
Trigger: ATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 90 bp TTCTCAAACCTCTTTGAAAGTGTTCTACCACACCCTGATTGTACTTaGGTTTTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTAT +
Preference number: 1 (lower is better)
Translates to: FSNLFESVLPHPDCT*VLKEKQVDLCPLSY
Trigger: ATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAAAACTCAAGTACAATCAGGGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CCA 90 bp CTGCCCGGCTCATTCTCATTTGTTAAAGTGACATTGTCAATAAGATaGGAAATTACACTCTCCTGCAGAATTGCAGTTGAATGTAGGTCA +
Preference number: 1 (lower is better)
Translates to: LPGSFSFVKVTLSIR*EITLSCRIAVECRS
Trigger: TGACCTACATTCAACTGCAATTCTGCAGGAGAGTGTAATTTCCCATCTTATTGACAATGTCACTTTAACAAATGAGAATGAGCCGGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 90 bp TTTGTTAAAGTGACATTGTCAATAAGATGGGAAATTACACTCTCCTaGAGAATTGCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGC +
Preference number: 1 (lower is better)
Translates to: FVKVTLSIRWEITLS*RIAVECRSGMSEQS
Trigger: GCTCTGTTCTGACATACCTGACCTACATTCAACTGCAATTCTGCAGGAGAGTGTAATTTCCCATCTTATTGACAATGTCACTTTAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 90 bp TTTGTGCTACTATTATCATTAGAGTCTGATGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAA +
Preference number: 1 (lower is better)
Translates to: FVLLLSLESDGSPSF*KPLFAVCNSIRKFK
Trigger: TTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAGACTCTAATGATAATAGTAGCACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CCA 90 bp ATACAGTTTACAACAACTCAAGGGAGAAAGATCATAATAGGTACATaGGAAATGTCACCAAATCTATATACAAACGCATTAACAGGGAGA +
Preference number: 1 (lower is better)
Translates to: IQFTTTQGRKIIIGT*EMSPNLYTNALTGR
Trigger: TCTCCCTGTTAATGCGTTTGTATATAGATTTGGTGACATTTCCCATGTACCTATTATGATCTTTCTCCCTTGAGTTGTTGTAAACTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCATTGCTTGTGGCATTTaGTGTGGTTCTCCCACCCCT +
Preference number: 2 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGIACGI*CGSPTP
Trigger: AGGGGTGGGAGAACCACATCAAATGCCACAAGCAAT...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACTGGCCAATCAGGGCTaGGATGGAACTGCCCGGCTC +
Preference number: 2 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRLANQG*DGTARL
Trigger: GAGCCGGGCAGTTCCATCTCAGCCCTGATTGGCCAG...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTGGGACATGCATATCTTaGGCACTAGATTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: VPGGADWHPALNIALGSCGTCIS*ALDCWG
Trigger: GCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCC...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAATGCCCCCTCTGGGATaGCCCGGCCTTCAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSMPPLG*PGLQGH
Trigger: GTGGCCTTGAAGGCCGGGGCATCCCAGAGGGGGCAT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCACAAGGGACAATGGCCTaGCATCACACTGGTATTATG +
Preference number: 2 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRAQGTMA*HHTGIM
Trigger: CATAATACCAGTGTGATGTCAGGCCATTGTCCCTTG...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp GAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTCCCAGTCTTCTCCCTaGGTAGGACTTTTTGGTAACCAGCCACGAGAAGTATTAGGGGAT +
Preference number: 2 (lower is better)
Translates to: EEAGLQLFSVSQSSP*VGLFGNQPREVLGD
Trigger: ATCCCCTAATACTTCTCGTGGCTGGTTACCAAAAAGTCCTACCAAGGGAGAAGACTGGGAAACACTGAAGAGCTGCAGCCCTGCCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp AGAACCACTCCTGCCCCATTGCTGGGGTTTGGAACTTTCTGCTTGTaGGCTTCCTGTTTCTCCTTGGCACGACTAGCAATATTGCGCACT +
Preference number: 2 (lower is better)
Translates to: RTTPAPLLGFGTFCL*ASCFSLARLAILRT
Trigger: AGTGCGCAATATTGCTAGTCGTGCCAAGGAGAAACAGGAAGCCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp CTAAGAACCACTCCTGCCCCATTGCTGGGGTTTGGAACTTTCTGCTaGTTGGCTTCCTGTTTCTCCTTGGCACGACTAGCAATATTGCGC +
Preference number: 2 (lower is better)
Translates to: LRTTPAPLLGFGTFC*LASCFSLARLAILR
Trigger: GCGCAATATTGCTAGTCGTGCCAAGGAGAAACAGGAAGCCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGGTTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTACAACTGTGAGAGCCTaGTTGTTGGTCTCATCAAAC +
Preference number: 2 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFTTVRA*LLVSSN
Trigger: GTTTGATGAGACCAACAATCAGGCTCTCACAGTTGT...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACAACAATGGTGTCCCCTTaGCTGGTATCTTTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTTMVSP*LVSLWS
Trigger: GCTCCACAAAGATACCAGCCAAGGGGACACCATTGT...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTGATGTGCCAACTGCTTaGGTACAGGGACATGCATAT +
Preference number: 2 (lower is better)
Translates to: VPGGADWHPALNIALGSCDVPTA*VQGHAY
Trigger: ATATGCATGTCCCTGTACCCAAGCAGTTGGCACATC...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGAGCATGGAGACGTCTaGCAAAGAAAAGGATGTTGC +
Preference number: 2 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQEHGDV*QRKGCC
Trigger: GCAACATCCTTTTCTTTGTCAGACGTCTCCATGCTC...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAGGATCGGGAGCCAAATaGTGCTTTGGGGAGAGAGAC +
Preference number: 2 (lower is better)
Translates to: AVECRSGMSEQSMETSDKGSGAK*CFGERD
Trigger: GTCTCTCTCCCCAAAGCAGCATTTGGCTCCCGATCC...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp CTTTTTGGTAACCAGCCACGAGAAGTATTAGGGGATCCAGGCAGGTaGCTTTCTAAGGCCGCTGTCTTGGCCTTACTAGAAAGGTCATCA +
Preference number: 2 (lower is better)
Translates to: LFGNQPREVLGDPGR*LSKAAVLALLERSS
Trigger: TGATGACCTTTCTAGTAAGGCCAAGACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCCCTAATACTTCTCGTGGCTGGTTACCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp CAAAGGAAGATGTGCCAACTGCTTGGGTACAGGGACATGCATATCTaGAGCACTAGATTGCTGGGGCACACAGGTCTGGAACATTTTTGC +
Preference number: 2 (lower is better)
Translates to: QRKMCQLLGYRDMHI*STRLLGHTGLEHFC
Trigger: GCAAAAATGTTCCAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAGTTGGCACATCTTCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp TTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACTTTTGGATTaGCAAGGACTAGGCAGTTTCAGAGCAGGCAAAGGAAGATGTGCC +
Preference number: 2 (lower is better)
Translates to: LQAMSSDVKSPRLLD*QGLGSFRAGKGRCA
Trigger: GGCACATCTTCCTTTGCCTGCTCTGAAACTGCCTAGTCCTTGCAAATCCAAAAGTCTGGGGGACTTAACATCAGAGGACATTGCCTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTTTTCTCAAACCTCTTTaGAAGTGTTCTACCACACCC +
Preference number: 2 (lower is better)
Translates to: VPGGADWHPALNIALGSCFLKPL*KCSTTP
Trigger: GGGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAA...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACAATCAGGGCTGAGATaGAACTGCCCGGCTCATTCT +
Preference number: 2 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRQSGLR*NCPAHS
Trigger: AGAATGAGCCGGGCAGTTCCATCTCAGCCCTGATTG...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTC +
Preference number: 2 (lower is better)
Translates to: KDILVKHTHIITRAAEEFGSPSF*KPLFAV
Trigger: GACTGCGAACAACGGCTTTCAGAATGAGGGACTTCC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 90 bp GACATGTGGGCAGTAGATACAATGGTGTCCCCTTGGCTGGTATCTTaGTGGAGCAGAGCACTGGAGGAGGATGATAACTTTTTGTTGAAA +
Preference number: 2 (lower is better)
Translates to: DMWAVDTMVSPWLVS*WSRALEEDDNFLLK
Trigger: TTTCAACAAAAAGTTATCATCCTCCTCCAGTGCTCTGCTCCACAAAGATACCAGCCAAGGGGACACCATTGTATCTACTGCCCACATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCCACCCCTAGGACTTaGCATGCCCAGCTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPTPRT*HAQLFS
Trigger: GGAGAACAGCTGGGCATGTCAAGTCCTAGGGGTGGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAGGGATCCAGGCAGGTTaGTTTCTAAGGCCGCTGTCT +
Preference number: 2 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLGIQAG*FLRPLS
Trigger: AGACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCC...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCATAGTGAAGAGCCGTaGATGCCCCCTCTGGGATGC +
Preference number: 2 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGHSEEP*MPPLGC
Trigger: GCATCCCAGAGGGGGCATGCACGGCTCTTCACTATG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGATGTTCGTTGCATGTTTaGTGGTCTCAGAACTCGAGA +
Preference number: 2 (lower is better)
Translates to: ETESGISYYILQGQIRGRCSLHV*WSQNSR
Trigger: TCTCGAGTTCTGAGACCACCAAACATGCAACGAACA...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp TCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACTTTaGGATTTGCAAGGACTAGGCAGTTTCAGAGCAGGCAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: SKLQAMSSDVKSPRL*DLQGLGSFRAGKGR
Trigger: TCTTCCTTTGCCTGCTCTGAAACTGCCTAGTCCTTGCAAATCCAAAAGTCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAACAGGGAGAACACATaGAGTCAAAGGGAGACCCAA +
Preference number: 2 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKNRENT*SQRETQ
Trigger: TTGGGTCTCCCTTTGACTTCATGTGTTCTCCCTGTT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAGAAAGGACGCTTCCTaGCAAGATGCTTTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRKDAS*QDAFPF
Trigger: GAAGGGAAAAGCATCTTGTCAGGAAGCGTCCTTTCT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAGGTTTTCCTGGCAATTaGTTGTGGCATTTGATGTGG +
Preference number: 2 (lower is better)
Translates to: AVECRSGMSEQSMETSDKGFPGN*LWHLMW
Trigger: CCACATCAAATGCCACAAGCAATTGCCAGGAAAACC...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAGGGCTGAGATGGAACTaGCCGGCTCATTCTCATTTG +
Preference number: 2 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLGLRWN*PAHSHL
Trigger: CAAATGAGAATGAGCCGGGCAGTTCCATCTCAGCCC...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCGTTGCATGTTTGGTaGTCTCAGAACTCGAGAGTG +
Preference number: 2 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSLHVW*SQNSRV
Trigger: CACTCTCGAGTTCTGAGACCACCAAACATGCAACGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp TTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATaGAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAA +
Preference number: 2 (lower is better)
Translates to: FSDSPSISTRLLSPE*KQRVGSAITSSRVK
Trigger: TTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATATAACCCGAGCTGCTaGGGAGTTTCACATCTAGGG +
Preference number: 2 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGYNPSC*GVSHLG
Trigger: CCCTAGATGTGAAACTCCTCAGCAGCTCGGGTTATA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTC +
Preference number: 2 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGSPSF*KPLFAV
Trigger: GACTGCGAACAACGGCTTTCAGAATGAGGGACTTCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAGTTGCTTGGTTCCCTaGAGGAAAAGGGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSCLVP*RKRVSS
Trigger: AGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAACT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATCTGTTCTCCTGTGACTaGCATGTGGGCAGTAGATAC +
Preference number: 2 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDLFSCD*HVGSRY
Trigger: GTATCTACTGCCCACATGTCAGTCACAGGAGAACAG...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATATTTCTAGGTTGCTATaGGAAAGGACGCTTCCTGAC +
Preference number: 2 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYISRLL*ERTLPD
Trigger: GTCAGGAAGCGTCCTTTCTCATAGCAACCTAGAAAT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATATCAGCTCCGGAGATaGGCACAGGAAGGAAGACTT +
Preference number: 2 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGYQLRR*AQEGRL
Trigger: AAGTCTTCCTTCCTGTGCTCATCTCCGGAGCTGATA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACGCTTCCTGACAAGATaGTTTTCCCTTCCACAAAGT +
Preference number: 2 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSRFLTR*FSLPQS
Trigger: ACTTTGTGGAAGGGAAAAGCATCTTGTCAGGAAGCG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACAAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 2 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAAAGTGGGAAGGGCATaGGGAGCAGCTATCCATCCC +
Preference number: 2 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGKVGRA*GAAIHP
Trigger: GGGATGGATAGCTGCTCCCCATGCCCTTCCCACTTT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGCCAAATGCTGCTTTaGGGAGAGAGACTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSQMLL*GERLAG
Trigger: CCCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCTAGGCAAGGGACAATaGCCTGACATCACACTGGTA +
Preference number: 2 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPLGKGQ*PDITLV
Trigger: TACCAGTGTGATGTCAGGCCATTGTCCCTTGCCTAG...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAAACAGGGAGAACACATaGAGTCAAAGGGAGACCCAA +
Preference number: 2 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLNRENT*SQRETQ
Trigger: TTGGGTCTCCCTTTGACTTCATGTGTTCTCCCTGTT...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAACAGGGAGAACACATaGAGTCAAAGGGAGACCCAA +
Preference number: 2 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGNRENT*SQRETQ
Trigger: TTGGGTCTCCCTTTGACTTCATGTGTTCTCCCTGTT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 2 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 2 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR GCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGAAATTACACTCTCCTaGAGAATTGCAGTTGAATGT +
Preference number: 2 (lower is better)
Translates to: ETESGISYYILQGQIRGREITLS*RIAVEC
Trigger: ACATTCAACTGCAATTCTGCAGGAGAGTGTAATTTC...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp GCTGAGATGGAACTGCCCGGCTCATTCTCATTTGTTAAAGTGACATaGTCAATAAGATGGGAAATTACACTCTCCTGCAGAATTGCAGTT +
Preference number: 2 (lower is better)
Translates to: AEMELPGSFSFVKVT*SIRWEITLSCRIAV
Trigger: AACTGCAATTCTGCAGGAGAGTGTAATTTCCCATCTTATTGACAATGTCACTTTAACAAATGAGAATGAGCCGGGCAGTTCCATCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp GCATCTATAGGCTCTAACGACTTTGTCTTCACAGTCACGCCCTTCTaGTCTCTAATGCCAGTTGTAACAAAACTCTTACTAATACACTGG +
Preference number: 2 (lower is better)
Translates to: ASIGSNDFVFTVTPF*SLMPVVTKLLLIHW
Trigger: CCAGTGTATTAGTAAGAGTTTTGTTACAACTGGCATTAGAGACAAGAAGGGCGTGACTGTGAAGACAAAGTCGTTAGAGCCTATAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTATAACCCGAGCTGCTaGGGAGTTTCACATCTAGGG +
Preference number: 2 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGYNPSC*GVSHLG
Trigger: CCCTAGATGTGAAACTCCTCAGCAGCTCGGGTTATA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR TCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAAGTTGCTTGGTTCCCTaGAGGAAAAGGGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLSCLVP*RKRVSS
Trigger: AGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAACT...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATTGTCAGAACAGAGCATaGAGACGTCTGACAAAGAAA +
Preference number: 2 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNCQNRA*RRLTKK
Trigger: TTTCTTTGTCAGACGTCTCCATGCTCTGTTCTGACA...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 90 bp TCTCTAATGCCAGTTGTAACAAAACTCTTACTAATACACTGGTACTaGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCC +
Preference number: 2 (lower is better)
Translates to: SLMPVVTKLLLIHWY*LSKLQAMSSDVKSP
Trigger: GGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAGTTTTGTTACAACTGGCATTAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCTTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 2 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATATTATCATTAGAGTCTaGTGGAAGTCCCTCATTCTG +
Preference number: 2 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNIIIRV*WKSLIL
Trigger: CAGAATGAGGGACTTCCATCAGACTCTAATGATAAT...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGTTGCTTGGTTCCCTaGAGGAAAAGGGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSCLVP*RKRVSS
Trigger: AGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAACT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR GCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATTTGATTTTCACACCATaGAGATCTTGTGTGGGGTTA +
Preference number: 2 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNLIFTP*RSCVGL
Trigger: TAACCCCACACAAGATCTGCATGGTGTGAAAATCAA...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR GCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTACCCTTGCAAAAACCATaGTTGATGGGCATTTTTAGG +
Preference number: 2 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLPLQKP*LMGIFR
Trigger: CCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGG...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATGGCCTGACATCACACTaGTATTATGAAGATGAGAAA +
Preference number: 2 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNGLTSH*YYEDEK
Trigger: TTTCTCATCTTCATAATACCAGTGTGATGTCAGGCC...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAATTATCATTAGAGTCTaGTGGAAGTCCCTCATTCTG +
Preference number: 2 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGIIIRV*WKSLIL
Trigger: CAGAATGAGGGACTTCCATCAGACTCTAATGATAAT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATTCACATCTAGGGCATaGACATATTTCATACTGATA +
Preference number: 2 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKFTSRA*TYFILI
Trigger: TATCAGTATGAAATATGTGCATGCCCTAGATGTGAA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATTCACATCTAGGGCATaGACATATTTCATACTGATA +
Preference number: 2 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSFTSRA*TYFILI
Trigger: TATCAGTATGAAATATGTGCATGCCCTAGATGTGAA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTCACATCTAGGGCATaGACATATTTCATACTGATA +
Preference number: 2 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFTSRA*TYFILI
Trigger: TATCAGTATGAAATATGTGCATGCCCTAGATGTGAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 2 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 2 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTGTGGAGCAGAGCACTaGAGGAGGATGATAACTTTT +
Preference number: 2 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGCGAEH*RRMITF
Trigger: AAAAGTTATCATCCTCCTCCAGTGCTCTGCTCCACA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 2 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 2 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR GCA 72 bp AAACTGGTCAACGTGGCCATAGTGAAGAGCCGTGCATaGCCCCTCTGGGATGCCCCGGCCTTCAAGGCCACC +
Preference number: 3 (lower is better)
Translates to: KLVNVAIVKSRA*PLWDAPAFKAT
Trigger: GGTGGCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCCACGTTGACCAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CCA 72 bp TCGTGTTCTTCAGGTAGCCTGCGATGTAGGAGCCGGTaGAGTGGCGATTCACTGCAGGGGTGGGTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: SCSSGSLRCRSR*SGDSLQGWVLR
Trigger: CCTCAGCACCCACCCCTGCAGTGAATCGCCACTCCACCGGCTCCTACATCGCAGGCTACCTGAAGAACACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCAGGTCATCATCTGGTTaGGTTTTAGAGATGGGAGTG +
Preference number: 3 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGRSSSG*VLEMGV
Trigger: CACTCCCATCTCTAAAACCAAACCAGATGATGACCT...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 72 bp TTCAAGGCCACCCCCTTTCGTGTTCTTCAGGTAGCCTaGGATGTAGGAGCCGGTGGAGTGGCGATTCACTGC +
Preference number: 3 (lower is better)
Translates to: FKATPFRVLQVA*DVGAGGVAIHC
Trigger: GCAGTGAATCGCCACTCCACCGGCTCCTACATCGCAGGCTACCTGAAGAACACGAAAGGGGGTGGCCTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 72 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTaGAGCTCTTCAGTGTTTCCCAGTCTTCTCCCTTGG +
Preference number: 3 (lower is better)
Translates to: HPPGSNQGKRQG*SSSVFPSLLPW
Trigger: CCAAGGGAGAAGACTGGGAAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 72 bp TCTTGTGTGGGGTTAACTACAGGATCGGGAGCCAAATaGTGCTTTGGGGAGAGAGACTTGCTGGGACAGGGG +
Preference number: 3 (lower is better)
Translates to: SCVGLTTGSGAK*CFGERDLLGQG
Trigger: CCCCTGTCCCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCTCCCGATCCTGTAGTTAACCCCACACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 72 bp CTGGATGACAACTTCCTGACCAGTGCCCGGGGGAGCTaGTTGGCATCCTGCTTTGAATATAGCACTTGGCAG +
Preference number: 3 (lower is better)
Translates to: LDDNFLTSARGS*LASCFEYSTWQ
Trigger: CTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCACTGGTCAGGAAGTTGTCATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 72 bp TGTGCCAACTGCTTGGGTACAGGGACATGCATATCTTaGGCACTAGATTGCTGGGGCACACAGGTCTGGAAC +
Preference number: 3 (lower is better)
Translates to: CANCLGTGTCIS*ALDCWGTQVWN
Trigger: GTTCCAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAGTTGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTCACACCATGCAGATCTaGTGTGGGGTTAACTACAGG +
Preference number: 3 (lower is better)
Translates to: VPGGADWHPALNIALGSCHTMQI*CGVNYR
Trigger: CCTGTAGTTAACCCCACACAAGATCTGCATGGTGTG...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTCATAAACTGTGTTCGTaGCATGTTTGGTGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFHKLCS*HVWWSQ
Trigger: CTGAGACCACCAAACATGCAACGAACACAGTTTATG...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCAGAGAAGCAAGTTGACTaGTGCCCTCTCTCCTATATT +
Preference number: 3 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRAEKQVD*CPLSYI
Trigger: AATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTC...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 72 bp TTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTaGTCGGTCAGGGCATCTATAGGCTCTAACGACTTT +
Preference number: 3 (lower is better)
Translates to: LSSWSKDTSFRS*SVRASIGSNDF
Trigger: AAAGTCGTTAGAGCCTATAGATGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCACCTTGGCTGGTATCTTaGTGGAGCAGAGCACTGGAG +
Preference number: 3 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSPWLVS*WSRALE
Trigger: CTCCAGTGCTCTGCTCCACAAAGATACCAGCCAAGG...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGTACAATGGTGTCCCCTaGGCTGGTATCTTTGTGGAG +
Preference number: 3 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKYNGVP*AGIFVE
Trigger: CTCCACAAAGATACCAGCCAAGGGGACACCATTGTA...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTCTAATACACTGGTACTaGCTCTCAAAATTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: VPGGADWHPALNIALGSCLIHWY*LSKLQA
Trigger: TGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAG...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTACCACTCCTGCCCCATaGCTGGGGTTTGGAACTTTC +
Preference number: 3 (lower is better)
Translates to: KDILVKHTHIITRAAEEFTTPAP*LGFGTF
Trigger: GAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGGT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAAATTGCTTGTGGCATTaGATGTGGTTCTCCCACCCC +
Preference number: 3 (lower is better)
Translates to: AVECRSGMSEQSMETSDKNCLWH*MWFSHP
Trigger: GGGGTGGGAGAACCACATCAAATGCCACAAGCAATT...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACAGACTTGGATTTTCCCTaGCAAAAACCATGCTTGATG +
Preference number: 3 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTDLDFP*QKPCLM
Trigger: CATCAAGCATGGTTTTTGCAAGGGAAAATCCAAGTC...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGGGATCCAGGCAGGTaGCTTTCTAAGGCCGCTGTC +
Preference number: 3 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGDPGR*LSKAAV
Trigger: GACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGTCATCCCTTTGTCGTTaGCAAAGTCTCTTAATCAAC +
Preference number: 3 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQSSLCR*QSLLIN
Trigger: GTTGATTAAGAGACTTTGCAAACGACAAAGGGATGA...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCGAGCCAAATGCTGCTTaGGGGAGAGAGACTTGCTGG +
Preference number: 3 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPEPNAA*GRETCW
Trigger: CCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCTC...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 72 bp CTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATTaGAACAGAGAGTGGGATCAGCTATTACATCCTCCA +
Preference number: 3 (lower is better)
Translates to: LHQFPQGCSPQN*NREWDQLLHPP
Trigger: TGGAGGATGTAATAGCTGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 72 bp CTAGGTTGCTATGAGAAAGGACGCTTCCTGACAAGATaGTTTTCCCTTCCACAAAGTCCTCAGGATTACCCT +
Preference number: 3 (lower is better)
Translates to: LGCYEKGRFLTR*FSLPQSPQDYP
Trigger: AGGGTAATCCTGAGGACTTTGTGGAAGGGAAAAGCATCTTGTCAGGAAGCGTCCTTTCTCATAGCAACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACACTCTCCTGCAGAATaGCAGTTGAATGTAGGTCAG +
Preference number: 3 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKHSPAE*QLNVGQ
Trigger: CTGACCTACATTCAACTGCAATTCTGCAGGAGAGTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTACAGTCACGCCCTTCTaGTCTCTAATGCCAGTTGTA +
Preference number: 3 (lower is better)
Translates to: KDILVKHTHIITRAAEEFTVTPF*SLMPVV
Trigger: TACAACTGGCATTAGAGACAAGAAGGGCGTGACTGT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR GCA 72 bp GATGGGAGTGCAGGTAGTTTCATAAACTGTGTTCGTTaGATGTTTGGTGGTCTCAGAACTCGAGAGTGCTAT +
Preference number: 3 (lower is better)
Translates to: DGSAGSFINCVR*MFGGLRTRECY
Trigger: ATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATGAAACTACCTGCACTCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CCA 72 bp CAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATaGAGACGTCTGACAAAGAAAAGGATGTTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: QLNVGQVCQNRA*RRLTKKRMLQL
Trigger: GAGCTGCAACATCCTTTTCTTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGATTGGCAACTCGCTTCTaGTTACATACAAAGCCATTA +
Preference number: 3 (lower is better)
Translates to: ETESGISYYILQGQIRGRLATRF*LHTKPL
Trigger: TAATGGCTTTGTATGTAACAAGAAGCGAGTTGCCAA...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTGTTCGTTGCATGTTaGGTGGTCTCAGAACTCGAG +
Preference number: 3 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDVFVAC*VVSELE
Trigger: CTCGAGTTCTGAGACCACCAAACATGCAACGAACAC...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 72 bp CTTGGTGAAACACACACACATTATAACCCGAGCTGCTaGGGAGTTTCACATCTAGGGCATGCACATATTTCA +
Preference number: 3 (lower is better)
Translates to: LGETHTHYNPSC*GVSHLGHAHIS
Trigger: TGAAATATGTGCATGCCCTAGATGTGAAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR TCA 72 bp ATCACTGCTTGGCTCAGTCTGCAAAACAGAATTATCTaGACAAAACTGGTCAACGTGGCCATAGTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: ITAWLSLQNRII*TKLVNVAIVKS
Trigger: GCTCTTCACTATGGCCACGTTGACCAGTTTTGTTCAGATAATTCTGTTTTGCAGACTGAGCCAAGCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGAAAGGAATTCATCCCTTaGTCGTTTGCAAAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRKEFIP*SFAKSL
Trigger: AAGAGACTTTGCAAACGACAAAGGGATGAATTCCTT...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTCTAAGGCCGCTGTCTaGGCCTTACTAGAAAGGTCA +
Preference number: 3 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSKAAV*ALLERS
Trigger: TGACCTTTCTAGTAAGGCCAAGACAGCGGCCTTAGA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTACTTGCTCTCAAAATaGCAGGCAATGTCCTCTGAT +
Preference number: 3 (lower is better)
Translates to: KDILVKHTHIITRAAEEFYLLSK*QAMSSD
Trigger: ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGTGGGTGCTGAGGGTTaGTTTCTAAGAACCACTCCT +
Preference number: 3 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGVGAEG*FLRTTP
Trigger: AGGAGTGGTTCTTAGAAACAAACCCTCAGCACCCAC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCATCCCTTTGTCGTTaGCAAAGTCTCTTAATCAAC +
Preference number: 3 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSSLCR*QSLLIN
Trigger: GTTGATTAAGAGACTTTGCAAACGACAAAGGGATGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAAGGAATTCATCCCTTaGTCGTTTGCAAAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: KDILVKHTHIITRAAEEFKEFIP*SFAKSL
Trigger: AAGAGACTTTGCAAACGACAAAGGGATGAATTCCTT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATTGGCAACTCGCTTCTaGTTACATACAAAGCCATTA +
Preference number: 3 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLATRF*LHTKPL
Trigger: TAATGGCTTTGTATGTAACAAGAAGCGAGTTGCCAA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR TCA 72 bp CTATTACCTTCCAGGTTCTTAATTTCTAGGTTGCTATaGGAAAGGACGCTTCCTGACAAGATGCTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: LLPSRFLISRLL*ERTLPDKMLFP
Trigger: AGGGAAAAGCATCTTGTCAGGAAGCGTCCTTTCTCATAGCAACCTAGAAATTAAGAACCTGGAAGGTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 72 bp ACATCACACTGGTATTATGAAGATGAGAAACAACTGTaGGAGCCTGATTGTTGGTCTCATCAAACTGGCCAA +
Preference number: 3 (lower is better)
Translates to: TSHWYYEDEKQL*EPDCWSHQTGQ
Trigger: TTGGCCAGTTTGATGAGACCAACAATCAGGCTCTCACAGTTGTTTCTCATCTTCATAATACCAGTGTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CCA 72 bp AGCAGCTATCCATCCCCTTTCAACTCTCATTATGGGTaGGATAAGAACATCCTAAAAGGCAAGGTAACTATT +
Preference number: 3 (lower is better)
Translates to: SSYPSPFNSHYG*DKNILKGKVTI
Trigger: AATAGTTACCTTGCCTTTTAGGATGTTCTTATCCCACCCATAATGAGAGTTGAAAGGGGATGGATAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CAA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAAGTACAACAGGTAGTTaGGCAACTCGCTTCTTGTTA +
Preference number: 3 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLSTTGS*ATRFLL
Trigger: TAACAAGAAGCGAGTTGCCAAACTACCTGTTGTACT...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAGTACAACAGGTAGTTaGGCAACTCGCTTCTTGTTA +
Preference number: 3 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSTTGS*ATRFLL
Trigger: TAACAAGAAGCGAGTTGCCAAACTACCTGTTGTACT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACACAGGAAGGAAGACTaGGATTTTCCCTTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGHRKED*DFPLQK
Trigger: TTTTTGCAAGGGAAAATCCAAGTCTTCCTTCCTGTG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATCATCCCTTTGTCGTTaGCAAAGTCTCTTAATCAAC +
Preference number: 3 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSSLCR*QSLLIN
Trigger: GTTGATTAAGAGACTTTGCAAACGACAAAGGGATGA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR TCA 72 bp CTATTATCATTAGAGTCTGATGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGA +
Preference number: 3 (lower is better)
Translates to: LLSLESDGSPSF*KPLFAVCNSIR
Trigger: TCTGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAGACTCTAATGATAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR GCA 72 bp GTGACATTGTCAATAAGATGGGAAATTACACTCTCCTaGAGAATTGCAGTTGAATGTAGGTCAGGTATGTCA +
Preference number: 3 (lower is better)
Translates to: VTLSIRWEITLS*RIAVECRSGMS
Trigger: TGACATACCTGACCTACATTCAACTGCAATTCTGCAGGAGAGTGTAATTTCCCATCTTATTGACAATGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGTACTAAAATAGAGTaGCTTGGTTCCCTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSTKIE*LGSLKE
Trigger: TTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR-3UTR CAA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATAGGTCTGGAACATTTTaGCATCTGAATCTGAGAAAT +
Preference number: 3 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDRSGTF*HLNLRN
Trigger: ATTTCTCAGATTCAGATGCAAAAATGTTCCAGACCT...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR TCA 72 bp GGAGTTTCACATCTAGGGCATGCACATATTTCATACTaGTACAGTTTACAACAACTCAAGGGAGAAAGATCA +
Preference number: 3 (lower is better)
Translates to: GVSHLGHAHISY*YSLQQLKGERS
Trigger: TGATCTTTCTCCCTTGAGTTGTTGTAAACTGTATCAGTATGAAATATGTGCATGCCCTAGATGTGAAACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CCA 72 bp ACAACAACTCAAGGGAGAAAGATCATAATAGGTACATaGGAAATGTCACCAAATCTATATACAAACGCATTA +
Preference number: 3 (lower is better)
Translates to: TTTQGRKIIIGT*EMSPNLYTNAL
Trigger: TAATGCGTTTGTATATAGATTTGGTGACATTTCCCATGTACCTATTATGATCTTTCTCCCTTGAGTTGTTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCTTCACCCATTGGTCATaGGTCCTCTGCCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGFTHWS*VLCLLA
Trigger: TGCCAAAAGGCAGAGGACCCATGACCAATGGGTGAA...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCGAGGGATCGTCCATGTaGTTTCTTTCCACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGEGSSM*FLSTFL
Trigger: AAGGAAAGTGGAAAGAAATCACATGGACGATCCCTC...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCTGCAAAAACCATGCTTaGTGGGCATTTTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGCKNHA*WAFLGP
Trigger: TGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCA...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCAAGCAAGTTGACTTGTaGCCTCTCTCCTATATTCAC +
Preference number: 4 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGKQVDL*PLSYIH
Trigger: GTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTT...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCACGTCCAATGGGATCGTaGTCCCACACAAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRARPMGS*SHTRNR
Trigger: TCGGTTCCTTGTGTGGGATCACGATCCCATTGGACG...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCAGTTCTTCAGGTAGCCTaGGATGTAGGAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRAVLQVA*DVGAGG
Trigger: TCCACCGGCTCCTACATCGCAGGCTACCTGAAGAAC...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTGTCTGCTTCACCCATTaGTCATGGGTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFVCFTH*SWVLCL
Trigger: AAGGCAGAGGACCCATGACCAATGGGTGAAGCAGAC...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTCTGTTCTCCTGTGACTaGCATGTGGGCAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFLFSCD*HVGSRY
Trigger: GTATCTACTGCCCACATGTCAGTCACAGGAGAACAG...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCATTGCGCACTCTGCTCTaGCTTCTGGATGACAACTTC +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRALRTLL*LLDDNF
Trigger: GAAGTTGTCATCCAGAAGTCAGAGCAGAGTGCGCAA...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCATATAACCCGAGCTGCTaGGGAGTTTCACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRAYNPSC*GVSHLG
Trigger: CCCTAGATGTGAAACTCCTCAGCAGCTCGGGTTATA...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGGATCCAGGCAGGTTaGTTTCTAAGGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQGIQAG*FLRPLS
Trigger: AGACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCC...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCAACAAGCTTCCGAAGCTaGTCGGTCAGGGCATCTATA +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRATSFRS*SVRASI
Trigger: TATAGATGCCCTGACCGAGCAGCTTCGGAAGCTTGT...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGTGAAGAGCCGTGCATaGCCCCTCTGGGATGCCCCG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKVKSRA*PLWDAP
Trigger: CGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCAC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGTGAAGAGCCGTGCATaGCCCCTCTGGGATGCCCCG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSVKSRA*PLWDAP
Trigger: CGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCAC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTCCCGGGGGAGCTGATTaGCATCCTGCTTTGAATATA +
Preference number: 4 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFPGGAD*HPALNI
Trigger: TATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGG...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCGTGCATGCCCCCTCTaGGATGCCCCGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYRACPL*DAPAFK
Trigger: CTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACAAAAGTGGGAAGGGCATaGGGAGCAGCTATCCATCCC +
Preference number: 4 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTKVGRA*GAAIHP
Trigger: GGGATGGATAGCTGCTCCCCATGCCCTTCCCACTTT...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTATATCCACTTTGGACTaGGAAAGGAGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFISTLD*ERSWSP
Trigger: TGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATAT...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCTGGCCAATCAGGGCTaGGATGGAACTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLANQG*DGTARL
Trigger: GAGCCGGGCAGTTCCATCTCAGCCCTGATTGGCCAG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCTGGCCAATCAGGGCTaGGATGGAACTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLANQG*DGTARL
Trigger: GAGCCGGGCAGTTCCATCTCAGCCCTGATTGGCCAG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCATGGAATATTTCAGACTaGCGGCCCTCAGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRAWNISD*RPSVTL
Trigger: CAAAGTGACTGAGGGCCGGCAGTCTGAAATATTCCA...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGGAAGAGGCAGGGCTaGAGCTCTTCAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ETESGISYYILQGQIRGRGKRQG*SSSVFP
Trigger: GGGAAACACTGAAGAGCTGCAGCCCTGCCTCTTCCC...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACATCTAAGAACCACTCCTaGCCCATTGCTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTSKNHS*PIAGVW
Trigger: CCAAACCCCAGCAATGGGGCAGGAGTGGTTCTTAGA...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGCATAGTGAAGAGCCGTaGATGCCCCCTCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKHSEEP*MPPLGC
Trigger: GCATCCCAGAGGGGGCATGCACGGCTCTTCACTATG...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGAGCCAAATGCTGCTTTaGGGAGAGAGACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQSQMLL*GERLAG
Trigger: CCCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCT...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTACTCCTCGGAGTCCGTaGCACAAGGAGCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFTPRSP*HKEPPP
Trigger: CGGAGGTGGCTCCTTGTGCCACGGACTCCGAGGAGT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS-3UTR TCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCAAATGTCAAAGTTCCCTaGTTCTCATCTGTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRANVKVP*FSSVSA
Trigger: AGCCGACACAGATGAGAATCAGGGAACTTTGACATT...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCCACCCCTAGGACTTaGCATGCCCAGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPTPRT*HAQLFS
Trigger: GGAGAACAGCTGGGCATGTCAAGTCCTAGGGGTGGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTGGATGACAACTTCCTaGCCAGTGCCCGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFWMTTS*PVPGGA
Trigger: AGCTCCCCCGGGCACTGGTCAGGAAGTTGTCATCCA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGGATGACAACTTCCTaGCCAGTGCCCGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSWMTTS*PVPGGA
Trigger: AGCTCCCCCGGGCACTGGTCAGGAAGTTGTCATCCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATGGATGACAACTTCCTaGCCAGTGCCCGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKWMTTS*PVPGGA
Trigger: AGCTCCCCCGGGCACTGGTCAGGAAGTTGTCATCCA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCACTTGGAAGCCCATTTTaGTCTTTTTCCTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRALGSPF*SFSCLW
Trigger: CCAAAGGCAGGAAAAAGAGCAAAATGGGCTTCCAAG...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGGGATCGGGAGCCAAATaGTGCTTTGGGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKGSGAK*CFGERD
Trigger: GTCTCTCTCCCCAAAGCAGCATTTGGCTCCCGATCC...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCAACTTCCTGACCAGTaGCCGGGGGAGCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYQLPDQ*PGELIG
Trigger: GCCAATCAGCTCCCCCGGGCACTGGTCAGGAAGTTG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACAACTTCCTGACCAGTaGCCGGGGGAGCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKQLPDQ*PGELIG
Trigger: GCCAATCAGCTCCCCCGGGCACTGGTCAGGAAGTTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACAACTTCCTGACCAGTaGCCGGGGGAGCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSQLPDQ*PGELIG
Trigger: GCCAATCAGCTCCCCCGGGCACTGGTCAGGAAGTTG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAATGCCCCCTCTGGGATaGCCCGGCCTTCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGMPPLG*PGLQGH
Trigger: GTGGCCTTGAAGGCCGGGGCATCCCAGAGGGGGCAT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGACCATGATGTACTACTaGCTCTCCATCTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQTMMYY*LSIWAI
Trigger: GATGGCCCAGATGGAGAGCCAGTAGTACATCATGGT...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGCTCGATCTCCAAACATaGAGTCTGGAGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQLDLQT*SLEVWG
Trigger: TCCCCAAACCTCCAGACTCCATGTTTGGAGATCGAG...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTTCCTGCCTTTGGCTaGGGCGCTAGCTGTGCGTCG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFPAFG*GASCAS
Trigger: CGACGCACAGCTAGCGCCCCAGCCAAAGGCAGGAAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTTCCTGCCTTTGGCTaGGGCGCTAGCTGTGCGTCG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYFPAFG*GASCAS
Trigger: CGACGCACAGCTAGCGCCCCAGCCAAAGGCAGGAAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTTGGCAGTTGTCTTCCTaGTCAAAGGACACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPGGADWHPALNIALGSCWQLSS*SKDTSF
Trigger: GAAGCTTGTGTCCTTTGACCAGGAAGACAACTGCCA...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACGTGCATGCCCCCTCTaGGATGCCCCGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGRACPL*DAPAFK
Trigger: CTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 72 bp AACCAGCCACGAGAAGTATTAGGGGATCCAGGCAGGTaGCTTTCTAAGGCCGCTGTCTTGGCCTTACTAGAA +
Preference number: 4 (lower is better)
Translates to: NQPREVLGDPGR*LSKAAVLALLE
Trigger: TTCTAGTAAGGCCAAGACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCCCTAATACTTCTCGTGGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 72 bp GGGCTGCAGCTCTTCAGTGTTTCCCAGTCTTCTCCCTaGGTAGGACTTTTTGGTAACCAGCCACGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GLQLFSVSQSSP*VGLFGNQPREV
Trigger: TACTTCTCGTGGCTGGTTACCAAAAAGTCCTACCAAGGGAGAAGACTGGGAAACACTGAAGAGCTGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 72 bp ATGTGCCAACTGCTTGGGTACAGGGACATGCATATCTaGAGCACTAGATTGCTGGGGCACACAGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MCQLLGYRDMHI*STRLLGHTGLE
Trigger: TTCCAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAGTTGGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTGCCATGGTAGATGGTaGAGCAGCAGCTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYCHGRW*SSSWGR
Trigger: TCGACCCCAGCTGCTGCTTCACCATCTACCATGGCA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATGCCATGGTAGATGGTaGAGCAGCAGCTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKCHGRW*SSSWGR
Trigger: TCGACCCCAGCTGCTGCTTCACCATCTACCATGGCA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACAGAGCATGGAGACGTCTaGCAAAGAAAAGGATGTTGC +
Preference number: 4 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTEHGDV*QRKGCC
Trigger: GCAACATCCTTTTCTTTGTCAGACGTCTCCATGCTC...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACAAAAGGAGAAGCAAGTTaGCTTGTGCCCTCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTKGEAS*LVPSLL
Trigger: TAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTT...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAGTGCCCGGGGGAGCTaGTTGGCATCCTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSARGS*LASCFE
Trigger: TTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCACT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAGTGCCCGGGGGAGCTaGTTGGCATCCTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSARGS*LASCFE
Trigger: TTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCACT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGAACAGGGAGAACACATaGAGTCAAAGGGAGACCCAA +
Preference number: 4 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQNRENT*SQRETQ
Trigger: TTGGGTCTCCCTTTGACTTCATGTGTTCTCCCTGTT...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGCTGGCCACCCTCCTTaGCAGTACTCTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFAGHPP*QYSAVC
Trigger: ACACACAGCAGAGTACTGGCAAGGAGGGTGGCCAGC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGCTGGCCACCCTCCTTaGCAGTACTCTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYAGHPP*QYSAVC
Trigger: ACACACAGCAGAGTACTGGCAAGGAGGGTGGCCAGC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGGCGTGCTTGCAAACTaGGTGTGGTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSGVLAN*VWSSSA
Trigger: TGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGAGACAGGGCGTGCTTaGAAACTGCGTGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFETGRA*KLRVVL
Trigger: GAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGAGACAGGGCGTGCTTaGAAACTGCGTGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYETGRA*KLRVVL
Trigger: GAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGAGACAGGGCGTGCTTaGAAACTGCGTGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKETGRA*KLRVVL
Trigger: GAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGGGAAGAGGCAGGGCTaGAGCTCTTCAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSGKRQG*SSSVFP
Trigger: GGGAAACACTGAAGAGCTGCAGCCCTGCCTCTTCCC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGGAAGAGGCAGGGCTaGAGCTCTTCAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGKRQG*SSSVFP
Trigger: GGGAAACACTGAAGAGCTGCAGCCCTGCCTCTTCCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTATGCCCCCTCTGGGATaGCCCGGCCTTCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGMPPLG*PGLQGH
Trigger: GTGGCCTTGAAGGCCGGGGCATCCCAGAGGGGGCAT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACATAGTGAAGAGCCGTaGATGCCCCCTCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSHSEEP*MPPLGC
Trigger: GCATCCCAGAGGGGGCATGCACGGCTCTTCACTATG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACTTGCAAACTGCGTGTaGTCCTCCTCAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRLANCV*SSSARH
Trigger: ATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAG...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGCAATCAGGGCTGAGATaGAACTGCCCGGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKQSGLR*NCPAHS
Trigger: AGAATGAGCCGGGCAGTTCCATCTCAGCCCTGATTG...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACATCGTTGCATGTTTGGTaGTCTCAGAACTCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTSLHVW*SQNSRV
Trigger: CACTCTCGAGTTCTGAGACCACCAAACATGCAACGA...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCGATGTAGGAGCCGGTaGAGTGGCGATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRCRSR*SGDSLQ
Trigger: CTGCAGTGAATCGCCACTCCACCGGCTCCTACATCG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACGATGTAGGAGCCGGTaGAGTGGCGATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSRCRSR*SGDSLQ
Trigger: CTGCAGTGAATCGCCACTCCACCGGCTCCTACATCG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACGATGTAGGAGCCGGTaGAGTGGCGATTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKRCRSR*SGDSLQ
Trigger: CTGCAGTGAATCGCCACTCCACCGGCTCCTACATCG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 72 bp GCTATCAGCTCCGGAGATGAGCACAGGAAGGAAGACTaGGATTTTCCCTTGCAAAAACCATGCTTGATGGGC +
Preference number: 4 (lower is better)
Translates to: AISSGDEHRKED*DFPLQKPCLMG
Trigger: GCCCATCAAGCATGGTTTTTGCAAGGGAAAATCCAAGTCTTCCTTCCTGTGCTCATCTCCGGAGCTGATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCATCCACAATGTCCTaGGCGGCCACGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSSTMS*AATEFV
Trigger: CACAAACTCCGTGGCCGCTCAGGACATTGTGGATGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCATCCACAATGTCCTaGGCGGCCACGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSSTMS*AATEFV
Trigger: CACAAACTCCGTGGCCGCTCAGGACATTGTGGATGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCGTCCAATGGGATCGTaGTCCCACACAAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRPMGS*SHTRNR
Trigger: TCGGTTCCTTGTGTGGGATCACGATCCCATTGGACG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCCACCCCTAGGACTTaGCATGCCCAGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPTPRT*HAQLFS
Trigger: GGAGAACAGCTGGGCATGTCAAGTCCTAGGGGTGGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTACCCACCCCTAGGACTTaGCATGCCCAGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLPTPRT*HAQLFS
Trigger: GGAGAACAGCTGGGCATGTCAAGTCCTAGGGGTGGG...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCTGGCCAATCAGGGCTaGGATGGAACTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLANQG*DGTARL
Trigger: GAGCCGGGCAGTTCCATCTCAGCCCTGATTGGCCAG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGAGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTC +
Preference number: 4 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRGSPSF*KPLFAV
Trigger: GACTGCGAACAACGGCTTTCAGAATGAGGGACTTCC...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACACGCTTCCTGACAAGATaGTTTTCCCTTCCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTRFLTR*FSLPQS
Trigger: ACTTTGTGGAAGGGAAAAGCATCTTGTCAGGAAGCG...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTCCCTTGCAAAAACCATaGTTGATGGGCATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: VPGGADWHPALNIALGSCPLQKP*LMGIFR
Trigger: CCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGG...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGGATCCAGGCAGGTTaGTTTCTAAGGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGIQAG*FLRPLS
Trigger: AGACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACCACTCCTGCCCCATTaGTGGGGTTTGGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRPLLPH*WGLELS
Trigger: AGAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGG...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGTTCTTCAGGTAGCCTaGGATGTAGGAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSVLQVA*DVGAGG
Trigger: TCCACCGGCTCCTACATCGCAGGCTACCTGAAGAAC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGTTCTTCAGGTAGCCTaGGATGTAGGAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFVLQVA*DVGAGG
Trigger: TCCACCGGCTCCTACATCGCAGGCTACCTGAAGAAC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGTGAAGAGCCGTGCATaGCCCCTCTGGGATGCCCCG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGVKSRA*PLWDAP
Trigger: CGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCAC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCTCGGCAGAGCTTCATaGTTTTCCTTCGGCGACCCA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLGRAS*FSFGDP
Trigger: TGGGTCGCCGAAGGAAAACCATGAAGCTCTGCCGAG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACTCGGCAGAGCTTCATaGTTTTCCTTCGGCGACCCA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKLGRAS*FSFGDP
Trigger: TGGGTCGCCGAAGGAAAACCATGAAGCTCTGCCGAG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCTCGGCAGAGCTTCATaGTTTTCCTTCGGCGACCCA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLGRAS*FSFGDP
Trigger: TGGGTCGCCGAAGGAAAACCATGAAGCTCTGCCGAG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGTCCAAACATGGAGTCTaGAGGTTTGGGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKSKHGV*RFGELL
Trigger: CAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGA...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTTCCTGCCTTTGGCTaGGGCGCTAGCTGTGCGTCG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGFPAFG*GASCAS
Trigger: CGACGCACAGCTAGCGCCCCAGCCAAAGGCAGGAAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCTTTCCTGCCTTTGGCTaGGGCGCTAGCTGTGCGTCG +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPFPAFG*GASCAS
Trigger: CGACGCACAGCTAGCGCCCCAGCCAAAGGCAGGAAA...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCTTGCAAACTGCGTGTaGTCCTCCTCAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLANCV*SSSARH
Trigger: ATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTTGCAAACTGCGTGTaGTCCTCCTCAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLANCV*SSSARH
Trigger: ATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTGGCCTGACATCACACTaGTATTATGAAGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFGLTSH*YYEDEK
Trigger: TTTCTCATCTTCATAATACCAGTGTGATGTCAGGCC...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCGTGCATGCCCCCTCTaGGATGCCCCGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGRACPL*DAPAFK
Trigger: CTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAAAGTGGGAAGGGCATaGGGAGCAGCTATCCATCCC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFKVGRA*GAAIHP
Trigger: GGGATGGATAGCTGCTCCCCATGCCCTTCCCACTTT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAAAGTGGGAAGGGCATaGGGAGCAGCTATCCATCCC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYKVGRA*GAAIHP
Trigger: GGGATGGATAGCTGCTCCCCATGCCCTTCCCACTTT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCCACCTCCGAAGTGCTaGGGTGATGAGTTATTGGCC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYPPPKC*GDELLA
Trigger: GGCCAATAACTCATCACCCCAGCACTTCGGAGGTGG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460012.7
3UTR CAA 72 bp CTTGGGTACAGGGACATGCATATCTTGAGCACTAGATaGCTGGGGCACACAGGTCTGGAACATTTTTGCATC +
Preference number: 4 (lower is better)
Translates to: LGYRDMHILSTR*LGHTGLEHFCI
Trigger: GATGCAAAAATGTTCCAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGATTCCACGTTTCAGCTTaGTCATCTGTGTCCCGGACT +
Preference number: 4 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRFHVSA*SSVSRT
Trigger: AGTCCGGGACACAGATGATCAAGCTGAAACGTGGAA...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGGGAGTCTTCATCACTaGTGCCAGCCATCAGGTACT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYGSLHH*CQPSGT
Trigger: AGTACCTGATGGCTGGCATCAGTGATGAAGACTCCC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGGGAGTCTTCATCACTaGTGCCAGCCATCAGGTACT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFGSLHH*CQPSGT
Trigger: AGTACCTGATGGCTGGCATCAGTGATGAAGACTCCC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAAGTAGGGGAGAGGGTTaGAGTTACTGGAATCAATGC +
Preference number: 4 (lower is better)
Translates to: ETESGISYYILQGQIRGRSRGEG*SYWNQC
Trigger: GCATTGATTCCAGTAACTTCAACCCTCTCCCCTACT...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTGGCCAATCAGGGCTaGGATGGAACTGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLANQG*DGTARL
Trigger: GAGCCGGGCAGTTCCATCTCAGCCCTGATTGGCCAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGATGCTCTCCCCAGAATTaGAACAGAGAGTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRCSPQN*NREWDQ
Trigger: CTGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCA...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGGGACATGCATATCTTaGGCACTAGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYGTCIS*ALDCWG
Trigger: GCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSGSPSF*KPLFAV
Trigger: GACTGCGAACAACGGCTTTCAGAATGAGGGACTTCC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGSPSF*KPLFAV
Trigger: GACTGCGAACAACGGCTTTCAGAATGAGGGACTTCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAATCTGTGTCCCGGACTaGATCACACTCATGCATCTT +
Preference number: 4 (lower is better)
Translates to: ETESGISYYILQGQIRGRICVPD*ITLMHL
Trigger: AAGATGCATGAGTGTGATGCAGTCCGGGACACAGAT...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCATGGTCATGGGTCCTCTaGCTTTTGGCAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSWSWVL*LLARES
Trigger: AGACTCCCTTGCCAAAAGGCAGAGGACCCATGACCA...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTGGTCATGGGTCCTCTaGCTTTTGGCAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYWSWVL*LLARES
Trigger: AGACTCCCTTGCCAAAAGGCAGAGGACCCATGACCA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGCTTGGAAGCTGCTTaGACTCCCCTGTATCAACAG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGLEAA*TPLYQQ
Trigger: CTGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGCGTGCTTGCAAACTaGGTGTGGTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGVLAN*VWSSSA
Trigger: TGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCGAGACAGGGCGTGCTTaGAAACTGCGTGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPETGRA*KLRVVL
Trigger: GAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTC...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCATAGAGACAGGGCGTaGTTGCAAACTGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYHRDRA*LQTACG
Trigger: ACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACATAGAGACAGGGCGTaGTTGCAAACTGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSHRDRA*LQTACG
Trigger: ACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGGCTGAGATGGAACTaGCCGGCTCATTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGLRWN*PAHSHL
Trigger: CAAATGAGAATGAGCCGGGCAGTTCCATCTCAGCCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGGGCTGAGATGGAACTaGCCGGCTCATTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFGLRWN*PAHSHL
Trigger: CAAATGAGAATGAGCCGGGCAGTTCCATCTCAGCCC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGGAAGAGGCAGGGCTaGAGCTCTTCAGTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGKRQG*SSSVFP
Trigger: GGGAAACACTGAAGAGCTGCAGCCCTGCCTCTTCCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGGAAGATGTGCCAACTaGTTGGGTACAGGGACATGC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSGRCAN*LGTGTC
Trigger: GCATGTCCCTGTACCCAAGCAGTTGGCACATCTTCC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCACTCCTGCCCCATTaGTGGGGTTTGGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPLLPH*WGLELS
Trigger: AGAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACCACTCCTGCCCCATTaGTGGGGTTTGGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSPLLPH*WGLELS
Trigger: AGAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATCTAAGAACCACTCCTaGCCCATTGCTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKSKNHS*PIAGVW
Trigger: CCAAACCCCAGCAATGGGGCAGGAGTGGTTCTTAGA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCTAAGAACCACTCCTaGCCCATTGCTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSKNHS*PIAGVW
Trigger: CCAAACCCCAGCAATGGGGCAGGAGTGGTTCTTAGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCTAAGAACCACTCCTaGCCCATTGCTGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSKNHS*PIAGVW
Trigger: CCAAACCCCAGCAATGGGGCAGGAGTGGTTCTTAGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTATGCCCCCTCTGGGATaGCCCGGCCTTCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVMPPLG*PGLQGH
Trigger: GTGGCCTTGAAGGCCGGGGCATCCCAGAGGGGGCAT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGTGAAGAGCCGTGCATaGCCCCTCTGGGATGCCCCG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVVKSRA*PLWDAP
Trigger: CGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCAC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCACCAGAAAATGCCTaGGGTACTGCACACAGTTCC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPPENA*GTAHSS
Trigger: GGAACTGTGTGCAGTACCGCAGGCATTTTCTGGTGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGGTCCTCTGCCTTTTaGCAAGGGAGTCTTCATCAC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGSSAF*QGSLHH
Trigger: GTGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGTCTGCTTCACCCATTaGTCATGGGTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYVCFTH*SWVLCL
Trigger: AAGGCAGAGGACCCATGACCAATGGGTGAAGCAGAC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGTCTGCTTCACCCATTaGTCATGGGTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSVCFTH*SWVLCL
Trigger: AAGGCAGAGGACCCATGACCAATGGGTGAAGCAGAC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTACTGGCTCTCCATCTaGGCCATCCCAACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFYWLSI*AIPTVN
Trigger: GTTGACTGTTGGGATGGCCCAGATGGAGAGCCAGTA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATACTGGCTCTCCATCTaGGCCATCCCAACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSYWLSI*AIPTVN
Trigger: GTTGACTGTTGGGATGGCCCAGATGGAGAGCCAGTA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCAAACTTTGAGGGCTTaGAAGCTGCTTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYQTLRA*KLLALP
Trigger: GGGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGTTTG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGACATCTTGATCTCTTGTaGCCTCGGACACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: ETESGISYYILQGQIRGRHLDLL*PRTQNP
Trigger: AGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATG...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGTGTCAGAACAGAGCATaGAGACGTCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQCQNRA*RRLTKK
Trigger: TTTCTTTGTCAGACGTCTCCATGCTCTGTTCTGACA...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACAATCAGGGCTGAGATaGAACTGCCCGGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKQSGLR*NCPAHS
Trigger: AGAATGAGCCGGGCAGTTCCATCTCAGCCCTGATTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACTAGGCAAGGGACAATaGCCTGACATCACACTGGTA +
Preference number: 4 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRLGKGQ*PDITLV
Trigger: TACCAGTGTGATGTCAGGCCATTGTCCCTTGCCTAG...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCTCCTGCCCCATTGCTaGGGTTTGGAACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLLPHC*GLELSA
Trigger: AGCAGAAAGTTCCAAACCCCAGCAATGGGGCAGGAG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCTCCTGCCCCATTGCTaGGGTTTGGAACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLLPHC*GLELSA
Trigger: AGCAGAAAGTTCCAAACCCCAGCAATGGGGCAGGAG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGATTCACTGCAGGGGTaGGTGCTGAGGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFDSLQG*VLRVCF
Trigger: GAAACAAACCCTCAGCACCCACCCCTGCAGTGAATC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCGTGCATGCCCCCTCTaGGATGCCCCGGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVRACPL*DAPAFK
Trigger: CTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACAGTACAACAGGTAGTTTaGCAACTCGCTTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTVQQVV*QLASCY
Trigger: GTAACAAGAAGCGAGTTGCCAAACTACCTGTTGTAC...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTCCACGTTTCAGCTTaGTCATCTGTGTCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFHVSA*SSVSRT
Trigger: AGTCCGGGACACAGATGATCAAGCTGAAACGTGGAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGACCTGAAACATTTGTCTaGCTTTTCTTCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ETESGISYYILQGQIRGRPETFV*LFFGAD
Trigger: ATCTGCCCCGAAGAAAAGTCAGACAAATGTTTCAGG...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTCTTCAAACTTCTTTATaGTGTCAAGACAATAGTCCG +
Preference number: 4 (lower is better)
Translates to: VPGGADWHPALNIALGSCLQTSL*CQDNSP
Trigger: CGGACTATTGTCTTGACATCATAAAGAAGTTTGAAG...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACCCTGTATCAACAGATaGCAGGTCCAGTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSPCINR*QVQFVS
Trigger: GGAGACAAACTGGACCTGTCATCTGTTGATACAGGG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATCATCCACAATGTCCTaGGCGGCCACGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSSTMS*AATEFV
Trigger: CACAAACTCCGTGGCCGCTCAGGACATTGTGGATGA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCAGGCACTAAGCTGCTaGAGGTCACAGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFQALSC*RSQFFV
Trigger: GACAAAGAACTGTGACCTTCAGCAGCTTAGTGCCTG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACAGGCACTAAGCTGCTaGAGGTCACAGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKQALSC*RSQFFV
Trigger: GACAAAGAACTGTGACCTTCAGCAGCTTAGTGCCTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCAGGCACTAAGCTGCTaGAGGTCACAGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYQALSC*RSQFFV
Trigger: GACAAAGAACTGTGACCTTCAGCAGCTTAGTGCCTG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTGTTCTCCTGTGACTaGCATGTGGGCAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLFSCD*HVGSRY
Trigger: GTATCTACTGCCCACATGTCAGTCACAGGAGAACAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACTGTTCTCCTGTGACTaGCATGTGGGCAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKLFSCD*HVGSRY
Trigger: GTATCTACTGCCCACATGTCAGTCACAGGAGAACAG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAATTGCTTGTGGCATTTaGTGTGGTTCTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSIACGI*CGSPTP
Trigger: AGGGGTGGGAGAACCACATCAAATGCCACAAGCAAT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTATCAGCTCCGGAGATaGGCACAGGAAGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFYQLRR*AQEGRL
Trigger: AAGTCTTCCTTCCTGTGCTCATCTCCGGAGCTGATA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTGCTCTCCCCAGAATTaGAACAGAGAGTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFCSPQN*NREWDQ
Trigger: CTGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGCTCTCCCCAGAATTaGAACAGAGAGTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSCSPQN*NREWDQ
Trigger: CTGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGTGCCCGGGGGAGCTaGTTGGCATCCTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSARGS*LASCFE
Trigger: TTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCACT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTGCGCACTCTGCTCTaGCTTCTGGATGACAACTTC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLRTLL*LLDDNF
Trigger: GAAGTTGTCATCCAGAAGTCAGAGCAGAGTGCGCAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTATAACCCGAGCTGCTaGGGAGTTTCACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYYNPSC*GVSHLG
Trigger: CCCTAGATGTGAAACTCCTCAGCAGCTCGGGTTATA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTATAACCCGAGCTGCTaGGGAGTTTCACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFYNPSC*GVSHLG
Trigger: CCCTAGATGTGAAACTCCTCAGCAGCTCGGGTTATA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGAGTTGCTTGGTTCCCTaGAGGAAAAGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKSCLVP*RKRVSS
Trigger: AGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAACT...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGCTTCCTCAAAGGTCTaGTTCACCCATTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSASSKV*FTHWSW
Trigger: CCATGACCAATGGGTGAAGCAGACCTTTGAGGAAGC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGCTTCCTCAAAGGTCTaGTTCACCCATTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKASSKV*FTHWSW
Trigger: CCATGACCAATGGGTGAAGCAGACCTTTGAGGAAGC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGCTTCCTCAAAGGTCTaGTTCACCCATTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYASSKV*FTHWSW
Trigger: CCATGACCAATGGGTGAAGCAGACCTTTGAGGAAGC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAAAGCAATGTAGTAGTTaGAGAGGGGCTGATCCATGT +
Preference number: 4 (lower is better)
Translates to: ETESGISYYILQGQIRGRKQCSS*RGADPC
Trigger: ACATGGATCAGCCCCTCTGCAACTACTACATTGCTT...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGCATTTAAGCCTTCATaGGTGGCCTTCAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSAFKPS*VAFSSA
Trigger: GGCACTACTGAAGGCCACGCATGAAGGCTTAAATGC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGCATTTAAGCCTTCATaGGTGGCCTTCAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYAFKPS*VAFSSA
Trigger: GGCACTACTGAAGGCCACGCATGAAGGCTTAAATGC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGCTGGCCACCCTCCTTaGCAGTACTCTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGAGHPP*QYSAVC
Trigger: ACACACAGCAGAGTACTGGCAAGGAGGGTGGCCAGC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGCGTGCTTGCAAACTaGGTGTGGTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGVLAN*VWSSSA
Trigger: TGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGATCGGGAGCCAAATaGTGCTTTGGGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGSGAK*CFGERD
Trigger: GTCTCTCTCCCCAAAGCAGCATTTGGCTCCCGATCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACAAAGAAAAGGATGTTaGAGCTCGGCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKQRKGC*SSALTP
Trigger: AGGGGTAAGGGCCGAGCTGCAACATCCTTTTCTTTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATGGGCTGAGATGGAACTaGCCGGCTCATTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNGLRWN*PAHSHL
Trigger: CAAATGAGAATGAGCCGGGCAGTTCCATCTCAGCCC...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAGGCAAAGGAAGATGTaGCAACTGCTTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKRQRKM*QLLGYR
Trigger: CCTGTACCCAAGCAGTTGGCACATCTTCCTTTGCCT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAACAAGCTTCCGAAGCTaGTCGGTCAGGGCATCTATA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKTSFRS*SVRASI
Trigger: TATAGATGCCCTGACCGAGCAGCTTCGGAAGCTTGT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATACAAGCTTCCGAAGCTaGTCGGTCAGGGCATCTATA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYTSFRS*SVRASI
Trigger: TATAGATGCCCTGACCGAGCAGCTTCGGAAGCTTGT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGTTCTTCAGGTAGCCTaGGATGTAGGAGCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGVLQVA*DVGAGG
Trigger: TCCACCGGCTCCTACATCGCAGGCTACCTGAAGAAC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCCAACTCCAAACCCCTaGCAAGGGCCAGAAAAGCCC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGPTPNP*QGPEKP
Trigger: GGGCTTTTCTGGCCCTTGGCAGGGGTTTGGAGTTGG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACCCTCAGCTTGTCTGTaGAATATTTCAGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSPSACL*NISDCR
Trigger: CCGGCAGTCTGAAATATTCCACAGACAAGCTGAGGG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCCTCAGCTTGTCTGTaGAATATTTCAGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPSACL*NISDCR
Trigger: CCGGCAGTCTGAAATATTCCACAGACAAGCTGAGGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTCACCCATTGGTCATaGGTCCTCTGCCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFTHWS*VLCLLA
Trigger: TGCCAAAAGGCAGAGGACCCATGACCAATGGGTGAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATACCATGATGTACTACTaGCTCTCCATCTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYTMMYY*LSIWAI
Trigger: GATGGCCCAGATGGAGAGCCAGTAGTACATCATGGT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATCAAACTTTGAGGGCTTaGAAGCTGCTTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNQTLRA*KLLALP
Trigger: GGGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGTTTG...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCCAAACATGGAGTCTaGAGGTTTGGGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSKHGV*RFGELL
Trigger: CAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAACATGGAGTCTaGAGGTTTGGGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSKHGV*RFGELL
Trigger: CAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATCCAAACATGGAGTCTaGAGGTTTGGGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKSKHGV*RFGELL
Trigger: CAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTCGATCTCCAAACATaGAGTCTGGAGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLDLQT*SLEVWG
Trigger: TCCCCAAACCTCCAGACTCCATGTTTGGAGATCGAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAACAATGGTGTCCCCTTaGCTGGTATCTTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSTMVSP*LVSLWS
Trigger: GCTCCACAAAGATACCAGCCAAGGGGACACCATTGT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACTAGGCAAGGGACAATaGCCTGACATCACACTGGTA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKLGKGQ*PDITLV
Trigger: TACCAGTGTGATGTCAGGCCATTGTCCCTTGCCTAG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACCCATTGCTGGGGTTTaGAACTTTCTGCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSPIAGV*NFLLVG
Trigger: GCCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCCCATTGCTGGGGTTTaGAACTTTCTGCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYPIAGV*NFLLVG
Trigger: GCCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 72 bp ATGTCCTCTGATGTTAAGTCCCCCAGACTTTTGGATTaGCAAGGACTAGGCAGTTTCAGAGCAGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: MSSDVKSPRLLD*QGLGSFRAGKG
Trigger: TCCTTTGCCTGCTCTGAAACTGCCTAGTCCTTGCAAATCCAAAAGTCTGGGGGACTTAACATCAGAGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTATATCCACTTTGGACTaGGAAAGGAGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFISTLD*ERSWSP
Trigger: TGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATAT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCAAAGGCATGCTTGTTaGTGGTCTCCACAACATCTC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYQRHAC*WSPQHL
Trigger: GAGATGTTGTGGAGACCATCAACAAGCATGCCTTTG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACAAAGGCATGCTTGTTaGTGGTCTCCACAACATCTC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSQRHAC*WSPQHL
Trigger: GAGATGTTGTGGAGACCATCAACAAGCATGCCTTTG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACAAAGGCATGCTTGTTaGTGGTCTCCACAACATCTC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKQRHAC*WSPQHL
Trigger: GAGATGTTGTGGAGACCATCAACAAGCATGCCTTTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTGCCTTTCAAACTTTaGGGGCTTGGAAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLPFKL*GLGSCL
Trigger: CAAGCAGCTTCCAAGCCCTCAAAGTTTGAAAGGCAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATTGCCTTTCAAACTTTaGGGGCTTGGAAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLPFKL*GLGSCL
Trigger: CAAGCAGCTTCCAAGCCCTCAAAGTTTGAAAGGCAA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAATGAAAGATTCCACCTaGTGCTCAGTGGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: AVECRSGMSEQSMETSDKMKDST*CSVVPL
Trigger: TAATGGGACCACTGAGCATCAGGTGGAATCTTTCAT...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGTAGTGCCCGCACTGTaGAACTATCAGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSVVPAL*NYQDLL
Trigger: AAGAAGATCCTGATAGTTTCACAGTGCGGGCACTAC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGTAGTGCCCGCACTGTaGAACTATCAGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKVVPAL*NYQDLL
Trigger: AAGAAGATCCTGATAGTTTCACAGTGCGGGCACTAC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGTAGTGCCCGCACTGTaGAACTATCAGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFVVPAL*NYQDLL
Trigger: AAGAAGATCCTGATAGTTTCACAGTGCGGGCACTAC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAGTAGGGGAGAGGGTTaGAGTTACTGGAATCAATGC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKSRGEG*SYWNQC
Trigger: GCATTGATTCCAGTAACTTCAACCCTCTCCCCTACT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGAGCATGGAGACGTCTaGCAAAGAAAAGGATGTTGC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFEHGDV*QRKGCC
Trigger: GCAACATCCTTTTCTTTGTCAGACGTCTCCATGCTC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACAAGGGACAATGGCCTaGCATCACACTGGTATTATG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSQGTMA*HHTGIM
Trigger: CATAATACCAGTGTGATGTCAGGCCATTGTCCCTTG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCAAGGGACAATGGCCTaGCATCACACTGGTATTATG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFQGTMA*HHTGIM
Trigger: CATAATACCAGTGTGATGTCAGGCCATTGTCCCTTG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGGACATGCATATCTTaGGCACTAGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGTCIS*ALDCWG
Trigger: GCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTGGATGACAACTTCCTaGCCAGTGCCCGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVWMTTS*PVPGGA
Trigger: AGCTCCCCCGGGCACTGGTCAGGAAGTTGTCATCCA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAACAGGGAGAACACATaGAGTCAAAGGGAGACCCAA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSNRENT*SQRETQ
Trigger: TTGGGTCTCCCTTTGACTTCATGTGTTCTCCCTGTT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAGTTATTGGCCCCTGTaGCTCCAACTCCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSYWPL*LQLQTP
Trigger: AGGGGTTTGGAGTTGGAGTCACAGGGGCCAATAACT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATATCTGTGTCCCGGACTaGATCACACTCATGCATCTT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYICVPD*ITLMHL
Trigger: AAGATGCATGAGTGTGATGCAGTCCGGGACACAGAT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATGGAATATTTCAGACTaGCGGCCCTCAGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKWNISD*RPSVTL
Trigger: CAAAGTGACTGAGGGCCGGCAGTCTGAAATATTCCA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCTCTTGCAGCACCCGTaGATACATATCCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLLQHP*IHIHFG
Trigger: TCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGGCTTGGAAGCTGCTTaGACTCCCCTGTATCAACAG +
Preference number: 4 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDGLEAA*TPLYQQ
Trigger: CTGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCC...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGCTTGGAAGCTGCTTaGACTCCCCTGTATCAACAG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGLEAA*TPLYQQ
Trigger: CTGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCCTTGCCAGTACTCTaGTGTGTGTCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSLPVL*CVSSSS
Trigger: TGATGAGGAAGACACACAGCAGAGTACTGGCAAGGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAAGTTACTGGAATCAATaGGGTAGGCAGAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: AVECRSGMSEQSMETSDKSYWNQ*GRQRGK
Trigger: TTTACCCCTCTGCCTACCGCATTGATTCCAGTAACT...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGGAGGTTTGGGGAGTTaGTGTCCACTGATAACTTTC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSGGLGS*CPLITF
Trigger: GAAAGTTATCAGTGGACAGCAACTCCCCAAACCTCC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGGAGGTTTGGGGAGTTaGTGTCCACTGATAACTTTC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFGGLGS*CPLITF
Trigger: GAAAGTTATCAGTGGACAGCAACTCCCCAAACCTCC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGAGGTTTGGGGAGTTaGTGTCCACTGATAACTTTC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGGLGS*CPLITF
Trigger: GAAAGTTATCAGTGGACAGCAACTCCCCAAACCTCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGATCGGGAGCCAAATaGTGCTTTGGGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGSGAK*CFGERD
Trigger: GTCTCTCTCCCCAAAGCAGCATTTGGCTCCCGATCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATCAAAGAAAAGGATGTTaGAGCTCGGCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNQRKGC*SSALTP
Trigger: AGGGGTAAGGGCCGAGCTGCAACATCCTTTTCTTTG...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGGATCCAGGCAGGTTaGTTTCTAAGGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGIQAG*FLRPLS
Trigger: AGACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAGGAAGATGTGCCAACTaGTTGGGTACAGGGACATGC +
Preference number: 4 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLGRCAN*LGTGTC
Trigger: GCATGTCCCTGTACCCAAGCAGTTGGCACATCTTCC...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCAACTTCCTGACCAGTaGCCGGGGGAGCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVQLPDQ*PGELIG
Trigger: GCCAATCAGCTCCCCCGGGCACTGGTCAGGAAGTTG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATACTGGCTCTCCATCTaGGCCATCCCAACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGYWLSI*AIPTVN
Trigger: GTTGACTGTTGGGATGGCCCAGATGGAGAGCCAGTA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTAAGCCTTCATGCGTaGCCTTCAGTAGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLSLHA*PSVVPA
Trigger: TGCGGGCACTACTGAAGGCCACGCATGAAGGCTTAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTAACCAAAGCTATTTCTaGCATGTGTACTGTAAATGT +
Preference number: 4 (lower is better)
Translates to: VPGGADWHPALNIALGSCNQSYF*HVYCKC
Trigger: ACATTTACAGTACACATGCCAGAAATAGCTTTGGTT...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACAAAGTCTCGTCCAATaGGATCGTGATCCCACACAA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKQSLVQ*DRDPTQ
Trigger: TTGTGTGGGATCACGATCCCATTGGACGAGACTTTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATACAATGGTGTCCCCTTaGCTGGTATCTTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNTMVSP*LVSLWS
Trigger: GCTCCACAAAGATACCAGCCAAGGGGACACCATTGT...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAGCCAAATGCTGCTTTaGGGAGAGAGACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSQMLL*GERLAG
Trigger: CCCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTGGTCTCATCAAACTaGCCAATCAGGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLVSSN*PIRAEM
Trigger: CATCTCAGCCCTGATTGGCCAGTTTGATGAGACCAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTGGTCTCATCAAACTaGCCAATCAGGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLVSSN*PIRAEM
Trigger: CATCTCAGCCCTGATTGGCCAGTTTGATGAGACCAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCGTTGCATGTTTGGTaGTCTCAGAACTCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSLHVW*SQNSRV
Trigger: CACTCTCGAGTTCTGAGACCACCAAACATGCAACGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCGTTGCATGTTTGGTaGTCTCAGAACTCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSLHVW*SQNSRV
Trigger: CACTCTCGAGTTCTGAGACCACCAAACATGCAACGA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGATGTGCCAACTGCTTaGGTACAGGGACATGCATAT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFDVPTA*VQGHAY
Trigger: ATATGCATGTCCCTGTACCCAAGCAGTTGGCACATC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATGGCAGTTGTCTTCCTaGTCAAAGGACACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKWQLSS*SKDTSF
Trigger: GAAGCTTGTGTCCTTTGACCAGGAAGACAACTGCCA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGGCAGTTGTCTTCCTaGTCAAAGGACACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSWQLSS*SKDTSF
Trigger: GAAGCTTGTGTCCTTTGACCAGGAAGACAACTGCCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCGATTCACTGCAGGGGTaGGTGCTGAGGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPDSLQG*VLRVCF
Trigger: GAAACAAACCCTCAGCACCCACCCCTGCAGTGAATC...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTCCACGTTTCAGCTTaGTCATCTGTGTCCCGGACT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGFHVSA*SSVSRT
Trigger: AGTCCGGGACACAGATGATCAAGCTGAAACGTGGAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCCTGAAACATTTGTCTaGCTTTTCTTCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYPETFV*LFFGAD
Trigger: ATCTGCCCCGAAGAAAAGTCAGACAAATGTTTCAGG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAATGTCAAAGTTCCCTaGTTCTCATCTGTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKNVKVP*FSSVSA
Trigger: AGCCGACACAGATGAGAATCAGGGAACTTTGACATT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAATGTCAAAGTTCCCTaGTTCTCATCTGTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFNVKVP*FSSVSA
Trigger: AGCCGACACAGATGAGAATCAGGGAACTTTGACATT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCCACCTTCAAAAACTaGGCCAGTTCTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSTFKN*ASSSTV
Trigger: AACTGTGGAAGAACTGGCTCAGTTTTTGAAGGTGGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCACCTTCAAAAACTaGGCCAGTTCTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSTFKN*ASSSTV
Trigger: AACTGTGGAAGAACTGGCTCAGTTTTTGAAGGTGGA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCCACCTTCAAAAACTaGGCCAGTTCTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSTFKN*ASSSTV
Trigger: AACTGTGGAAGAACTGGCTCAGTTTTTGAAGGTGGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTACCCTGTATCAACAGATaGCAGGTCCAGTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLPCINR*QVQFVS
Trigger: GGAGACAAACTGGACCTGTCATCTGTTGATACAGGG...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCCTGTATCAACAGATaGCAGGTCCAGTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPCINR*QVQFVS
Trigger: GGAGACAAACTGGACCTGTCATCTGTTGATACAGGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATATGAAAGATTCCACCTaGTGCTCAGTGGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYMKDST*CSVVPL
Trigger: TAATGGGACCACTGAGCATCAGGTGGAATCTTTCAT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATTCCAAAGTTGGTCATaGGGGATCGTCCATGTGATT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSFQSWS*GIVHVI
Trigger: AATCACATGGACGATCCCTCATGACCAACTTTGGAA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTCCAAAGTTGGTCATaGGGGATCGTCCATGTGATT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFQSWS*GIVHVI
Trigger: AATCACATGGACGATCCCTCATGACCAACTTTGGAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTCATCCACAATGTCCTaGGCGGCCACGGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGSSTMS*AATEFV
Trigger: CACAAACTCCGTGGCCGCTCAGGACATTGTGGATGA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAAATTGCCATTTGCCTTaGATTTGGCTCGGTTTAACT +
Preference number: 4 (lower is better)
Translates to: ETESGISYYILQGQIRGRNCHLP*IWLGLT
Trigger: AGTTAAACCGAGCCAAATTCAAGGCAAATGGCAATT...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCGTCCAATGGGATCGTaGTCCCACACAAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGRPMGS*SHTRNR
Trigger: TCGGTTCCTTGTGTGGGATCACGATCCCATTGGACG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAATTTCTAGGTTGCTATaGGAAAGGACGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKISRLL*ERTLPD
Trigger: GTCAGGAAGCGTCCTTTCTCATAGCAACCTAGAAAT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAACAACTGTGAGAGCCTaGTTGTTGGTCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKTTVRA*LLVSSN
Trigger: GTTTGATGAGACCAACAATCAGGCTCTCACAGTTGT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGATGAGAAACAACTGTaGGAGCCTGATTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFDEKQL*EPDCWS
Trigger: AGACCAACAATCAGGCTCTCACAGTTGTTTCTCATC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTGCAAAAACCATGCTTaGTGGGCATTTTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFCKNHA*WAFLGP
Trigger: TGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTGCAAAAACCATGCTTaGTGGGCATTTTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYCKNHA*WAFLGP
Trigger: TGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGCAAAAACCATGCTTaGTGGGCATTTTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSCKNHA*WAFLGP
Trigger: TGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGGACATGCATATCTTaGGCACTAGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGTCIS*ALDCWG
Trigger: GCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGATTATCATTAGAGTCTaGTGGAAGTCCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKIIIRV*WKSLIL
Trigger: CAGAATGAGGGACTTCCATCAGACTCTAATGATAAT...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAGTTGCTTGGTTCCCTaGAGGAAAAGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSCLVP*RKRVSS
Trigger: AGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAACT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTGGTCATGGGTCCTCTaGCTTTTGGCAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGWSWVL*LLARES
Trigger: AGACTCCCTTGCCAAAAGGCAGAGGACCCATGACCA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAAGCAATGTAGTAGTTaGAGAGGGGCTGATCCATGT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKKQCSS*RGADPC
Trigger: ACATGGATCAGCCCCTCTGCAACTACTACATTGCTT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAAGCAATGTAGTAGTTaGAGAGGGGCTGATCCATGT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSKQCSS*RGADPC
Trigger: ACATGGATCAGCCCCTCTGCAACTACTACATTGCTT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGCTGGCCACCCTCCTTaGCAGTACTCTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVAGHPP*QYSAVC
Trigger: ACACACAGCAGAGTACTGGCAAGGAGGGTGGCCAGC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAGTTACTGGAATCAATaGGGTAGGCAGAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSYWNQ*GRQRGK
Trigger: TTTACCCCTCTGCCTACCGCATTGATTCCAGTAACT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCTTGGAAGCCCATTTTaGTCTTTTTCCTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLGSPF*SFSCLW
Trigger: CCAAAGGCAGGAAAAAGAGCAAAATGGGCTTCCAAG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGCGTGCTTGCAAACTaGGTGTGGTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGVLAN*VWSSSA
Trigger: TGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCATAGAGACAGGGCGTaGTTGCAAACTGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGHRDRA*LQTACG
Trigger: ACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGTTTTCCTGGCAATTaGTTGTGGCATTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGFPGN*LWHLMW
Trigger: CCACATCAAATGCCACAAGCAATTGCCAGGAAAACC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGGTTTTCCTGGCAATTaGTTGTGGCATTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFGFPGN*LWHLMW
Trigger: CCACATCAAATGCCACAAGCAATTGCCAGGAAAACC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCGCTTCCTGACAAGATaGTTTTCCCTTCCACAAAGT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYRFLTR*FSLPQS
Trigger: ACTTTGTGGAAGGGAAAAGCATCTTGTCAGGAAGCG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACAAAGAAAAGGATGTTaGAGCTCGGCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGQRKGC*SSALTP
Trigger: AGGGGTAAGGGCCGAGCTGCAACATCCTTTTCTTTG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGGCTGAGATGGAACTaGCCGGCTCATTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGLRWN*PAHSHL
Trigger: CAAATGAGAATGAGCCGGGCAGTTCCATCTCAGCCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGGGATCCAGGCAGGTTaGTTTCTAAGGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGGIQAG*FLRPLS
Trigger: AGACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAGGCAAAGGAAGATGTaGCAACTGCTTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGRQRKM*QLLGYR
Trigger: CCTGTACCCAAGCAGTTGGCACATCTTCCTTTGCCT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAAGGCAAAGGAAGATGTaGCAACTGCTTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLRQRKM*QLLGYR
Trigger: CCTGTACCCAAGCAGTTGGCACATCTTCCTTTGCCT...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCAATATTGCGCACTCTaGTCTGACTTCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYQYCAL*SDFWMT
Trigger: TGTCATCCAGAAGTCAGAGCAGAGTGCGCAATATTG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCAATATTGCGCACTCTaGTCTGACTTCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFQYCAL*SDFWMT
Trigger: TGTCATCCAGAAGTCAGAGCAGAGTGCGCAATATTG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGGGTTTGGAACTTTCTaGTTGTTGGCTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYGFGTF*LLASCF
Trigger: GAAACAGGAAGCCAACAAGCAGAAAGTTCCAAACCC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGGTTTGGAACTTTCTaGTTGTTGGCTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGFGTF*LLASCF
Trigger: GAAACAGGAAGCCAACAAGCAGAAAGTTCCAAACCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCCACTCCTGCCCCATTaGTGGGGTTTGGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGPLLPH*WGLELS
Trigger: AGAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCATAGTGAAGAGCCGTaGATGCCCCCTCTGGGATGC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVHSEEP*MPPLGC
Trigger: GCATCCCAGAGGGGGCATGCACGGCTCTTCACTATG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTGTCCACCAGAAAATaGCTGCGGTACTGCACACAG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLSTRK*LRYCTQ
Trigger: CTGTGTGCAGTACCGCAGGCATTTTCTGGTGGACAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGAGCCACCTCCGAAGTaGTGGGGTGATGAGTTATTG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGEPPPK*WGDELL
Trigger: CAATAACTCATCACCCCAGCACTTCGGAGGTGGCTC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCCTCAGCTTGTCTGTaGAATATTTCAGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPSACL*NISDCR
Trigger: CCGGCAGTCTGAAATATTCCACAGACAAGCTGAGGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTCACCCATTGGTCATaGGTCCTCTGCCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGFTHWS*VLCLLA
Trigger: TGCCAAAAGGCAGAGGACCCATGACCAATGGGTGAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGTCTGCTTCACCCATTaGTCATGGGTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGVCFTH*SWVLCL
Trigger: AAGGCAGAGGACCCATGACCAATGGGTGAAGCAGAC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTACTGGCTCTCCATCTaGGCCATCCCAACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGYWLSI*AIPTVN
Trigger: GTTGACTGTTGGGATGGCCCAGATGGAGAGCCAGTA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAACCATGATGTACTACTaGCTCTCCATCTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGTMMYY*LSIWAI
Trigger: GATGGCCCAGATGGAGAGCCAGTAGTACATCATGGT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACCACCTGATGCTCAGTaGTCCCATTACTATAATGGA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSPPDAQ*SHYYNG
Trigger: TCCATTATAGTAATGGGACCACTGAGCATCAGGTGG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCCACCTGATGCTCAGTaGTCCCATTACTATAATGGA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYPPDAQ*SHYYNG
Trigger: TCCATTATAGTAATGGGACCACTGAGCATCAGGTGG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACCACCTGATGCTCAGTaGTCCCATTACTATAATGGA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKPPDAQ*SHYYNG
Trigger: TCCATTATAGTAATGGGACCACTGAGCATCAGGTGG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTAAGCCTTCATGCGTaGCCTTCAGTAGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLSLHA*PSVVPA
Trigger: TGCGGGCACTACTGAAGGCCACGCATGAAGGCTTAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAACTTTCCTTTACATCTaGACTCTGCTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSTFLYI*TLLQVC
Trigger: GCACACCTGAAGCAGAGTCCAGATGTAAAGGAAAGT...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTCGGCAGAGCTTCATaGTTTTCCTTCGGCGACCCA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLGRAS*FSFGDP
Trigger: TGGGTCGCCGAAGGAAAACCATGAAGCTCTGCCGAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACTCGATCTCCAAACATaGAGTCTGGAGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLDLQT*SLEVWG
Trigger: TCCCCAAACCTCCAGACTCCATGTTTGGAGATCGAG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAGTCCCTTCAGACCCTaGAGTTGTCTGTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSPFRP*SCLFFV
Trigger: TACAAAGAACAGACAACTCCAGGGTCTGAAGGGACT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340059.11
ENST00000447496.6
CDS-3UTR CCA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAAGTCCCTTCAGACCCTaGAGTTGTCTGTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSSPFRP*SCLFFV
Trigger: TACAAAGAACAGACAACTCCAGGGTCTGAAGGGACT...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTGTGGAGCAGAGCACTaGAGGAGGATGATAACTTTT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYCGAEH*RRMITF
Trigger: AAAAGTTATCATCCTCCTCCAGTGCTCTGCTCCACA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATGTGGAGCAGAGCACTaGAGGAGGATGATAACTTTT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKCGAEH*RRMITF
Trigger: AAAAGTTATCATCCTCCTCCAGTGCTCTGCTCCACA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAACAATGGTGTCCCCTTaGCTGGTATCTTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGTMVSP*LVSLWS
Trigger: GCTCCACAAAGATACCAGCCAAGGGGACACCATTGT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTGTTCGTTGCATGTTTaGTGGTCTCAGAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYCSLHV*WSQNSR
Trigger: TCTCGAGTTCTGAGACCACCAAACATGCAACGAACA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGGGGCACACAGGTCTaGAACATTTTTGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSWGTQV*NIFASE
Trigger: TTCAGATGCAAAAATGTTCCAGACCTGTGTGCCCCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCCGGGGGAGCTGATTaGCATCCTGCTTTGAATATA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPGGAD*HPALNI
Trigger: TATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCCCATTGCTGGGGTTTaGAACTTTCTGCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPPIAGV*NFLLVG
Trigger: GCCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGG...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGATTCACTGCAGGGGTaGGTGCTGAGGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGDSLQG*VLRVCF
Trigger: GAAACAAACCCTCAGCACCCACCCCTGCAGTGAATC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 72 bp GAGGGTCTCTTTACAGTAGCCGTTTCTCAAACCTCTTaGAAAGTGTTCTACCACACCCTGATTGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: EGLFTVAVSQTS*KVFYHTLIVLE
Trigger: CTCAAGTACAATCAGGGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAACGGCTACTGTAAAGAGACCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACAAAGGCATGCTTGTTaGTGGTCTCCACAACATCTC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGQRHAC*WSPQHL
Trigger: GAGATGTTGTGGAGACCATCAACAAGCATGCCTTTG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTGCCTTTCAAACTTTaGGGGCTTGGAAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLPFKL*GLGSCL
Trigger: CAAGCAGCTTCCAAGCCCTCAAAGTTTGAAAGGCAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGTAGTGCCCGCACTGTaGAACTATCAGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGVVPAL*NYQDLL
Trigger: AAGAAGATCCTGATAGTTTCACAGTGCGGGCACTAC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACACCAGAGAAAGGGTTaGAAGTACCTTTGCACATTT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSHQRKG*KYLCTF
Trigger: AAATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCACCAGAGAAAGGGTTaGAAGTACCTTTGCACATTT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFHQRKG*KYLCTF
Trigger: AAATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCTGTTCTCCTGTGACTaGCATGTGGGCAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLFSCD*HVGSRY
Trigger: GTATCTACTGCCCACATGTCAGTCACAGGAGAACAG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAGAAAGGACGCTTCCTaGCAAGATGCTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGRKDAS*QDAFPF
Trigger: GAAGGGAAAAGCATCTTGTCAGGAAGCGTCCTTTCT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGAGCATGGAGACGTCTaGCAAAGAAAAGGATGTTGC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGEHGDV*QRKGCC
Trigger: GCAACATCCTTTTCTTTGTCAGACGTCTCCATGCTC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATGATGAGAAACAACTGTaGGAGCCTGATTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNDEKQL*EPDCWS
Trigger: AGACCAACAATCAGGCTCTCACAGTTGTTTCTCATC...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTGCTCTCCCCAGAATTaGAACAGAGAGTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGCSPQN*NREWDQ
Trigger: CTGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATTTCTCAAACCTCTTTaGAAGTGTTCTACCACACCC +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKFLKPL*KCSTTP
Trigger: GGGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGGGACATGCATATCTTaGGCACTAGATTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGGTCIS*ALDCWG
Trigger: GCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTGGTCATGGGTCCTCTaGCTTTTGGCAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGWSWVL*LLARES
Trigger: AGACTCCCTTGCCAAAAGGCAGAGGACCCATGACCA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACTCTTGCAGCACCCGTaGATACATATCCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLLQHP*IHIHFG
Trigger: TCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGGCTTGGAAGCTGCTTaGACTCCCCTGTATCAACAG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGGLEAA*TPLYQQ
Trigger: CTGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATCCTTGCCAGTACTCTaGTGTGTGTCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSLPVL*CVSSSS
Trigger: TGATGAGGAAGACACACAGCAGAGTACTGGCAAGGA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTGGCTCGGTTTAACTaGATCATTCGTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLARFN*IIRPSD
Trigger: ATCTGAAGGACGAATGATGCAGTTAAACCGAGCCAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATGGTTTTCCTGGCAATTaGTTGTGGCATTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNGFPGN*LWHLMW
Trigger: CCACATCAAATGCCACAAGCAATTGCCAGGAAAACC...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAAGCAAGTTGACTTGTaGCCTCTCTCCTATATTCAC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYKQVDL*PLSYIH
Trigger: GTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAAGCAAGTTGACTTGTaGCCTCTCTCCTATATTCAC +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFKQVDL*PLSYIH
Trigger: GTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAACTTGCTCTCAAAATTaGAGGCAATGTCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSTCSQN*RQCPLM
Trigger: CATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTACTTGCTCTCAAAATTaGAGGCAATGTCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFTCSQN*RQCPLM
Trigger: CATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAACTTGCTCTCAAAATTaGAGGCAATGTCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKTCSQN*RQCPLM
Trigger: CATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTACAAGCTTCCGAAGCTaGTCGGTCAGGGCATCTATA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGTSFRS*SVRASI
Trigger: TATAGATGCCCTGACCGAGCAGCTTCGGAAGCTTGT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCTGGTTTATCATCACTaGTTGGCTCAGTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLVYHH*LAQSAK
Trigger: TTTTGCAGACTGAGCCAAGCAGTGATGATAAACCAG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCACCCATTGGTCATaGGTCCTCTGCCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGFTHWS*VLCLLA
Trigger: TGCCAAAAGGCAGAGGACCCATGACCAATGGGTGAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACAAAGTCTCGTCCAATaGGATCGTGATCCCACACAA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGQSLVQ*DRDPTQ
Trigger: TTGTGTGGGATCACGATCCCATTGGACGAGACTTTG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAAAGTCTCGTCCAATaGGATCGTGATCCCACACAA +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPQSLVQ*DRDPTQ
Trigger: TTGTGTGGGATCACGATCCCATTGGACGAGACTTTG...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCTTGCAAACTGCGTGTaGTCCTCCTCAGCACGCCAT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVLANCV*SSSARH
Trigger: ATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTACAATGGTGTCCCCTTaGCTGGTATCTTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGTMVSP*LVSLWS
Trigger: GCTCCACAAAGATACCAGCCAAGGGGACACCATTGT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATGTCAGAACAGAGCATaGAGACGTCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKCQNRA*RRLTKK
Trigger: TTTCTTTGTCAGACGTCTCCATGCTCTGTTCTGACA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGTCAGAACAGAGCATaGAGACGTCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSCQNRA*RRLTKK
Trigger: TTTCTTTGTCAGACGTCTCCATGCTCTGTTCTGACA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCAATCAGGGCTGAGATaGAACTGCCCGGCTCATTCT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGQSGLR*NCPAHS
Trigger: AGAATGAGCCGGGCAGTTCCATCTCAGCCCTGATTG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGATGTGCCAACTGCTTaGGTACAGGGACATGCATAT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGDVPTA*VQGHAY
Trigger: ATATGCATGTCCCTGTACCCAAGCAGTTGGCACATC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTCCTGCCCCATTGCTaGGGTTTGGAACTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLLPHC*GLELSA
Trigger: AGCAGAAAGTTCCAAACCCCAGCAATGGGGCAGGAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAAAGTGGGAAGGGCATaGGGAGCAGCTATCCATCCC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVKVGRA*GAAIHP
Trigger: GGGATGGATAGCTGCTCCCCATGCCCTTCCCACTTT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGTACAACAGGTAGTTTaGCAACTCGCTTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSVQQVV*QLASCY
Trigger: GTAACAAGAAGCGAGTTGCCAAACTACCTGTTGTAC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGTACAACAGGTAGTTTaGCAACTCGCTTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYVQQVV*QLASCY
Trigger: GTAACAAGAAGCGAGTTGCCAAACTACCTGTTGTAC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 72 bp GGCTCTAACGACTTTGTCTTCACAGTCACGCCCTTCTaGTCTCTAATGCCAGTTGTAACAAAACTCTTACTA +
Preference number: 4 (lower is better)
Translates to: GSNDFVFTVTPF*SLMPVVTKLLL
Trigger: TAGTAAGAGTTTTGTTACAACTGGCATTAGAGACAAGAAGGGCGTGACTGTGAAGACAAAGTCGTTAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAATGTCAAAGTTCCCTaGTTCTCATCTGTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGNVKVP*FSSVSA
Trigger: AGCCGACACAGATGAGAATCAGGGAACTTTGACATT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTATATCCACTTTGGACTaGGAAAGGAGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGISTLD*ERSWSP
Trigger: TGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATAT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGCTGGATACTGCAGTaGTTCTCGATAGACAATATA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSCWILQ*FSIDNI
Trigger: TATATTGTCTATCGAGAATCACTGCAGTATCCAGCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCATGCTGGATACTGCAGTaGTTCTCGATAGACAATATA +
Preference number: 4 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSCWILQ*FSIDNI
Trigger: TATATTGTCTATCGAGAATCACTGCAGTATCCAGCA...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTGCCTTTCAAACTTTaGGGGCTTGGAAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLPFKL*GLGSCL
Trigger: CAAGCAGCTTCCAAGCCCTCAAAGTTTGAAAGGCAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAATCATGAACTGCTCTaGTTTTTGCTGAACAACCTG +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYNHELL*FLLNNL
Trigger: CAGGTTGTTCAGCAAAAATCAGAGCAGTTCATGATT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAAATCATGAACTGCTCTaGTTTTTGCTGAACAACCTG +
Preference number: 4 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSNHELL*FLLNNL
Trigger: CAGGTTGTTCAGCAAAAATCAGAGCAGTTCATGATT...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGTAGGGGAGAGGGTTaGAGTTACTGGAATCAATGC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSRGEG*SYWNQC
Trigger: GCATTGATTCCAGTAACTTCAACCCTCTCCCCTACT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAATTGCCATTTGCCTTaGATTTGGCTCGGTTTAACT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKNCHLP*IWLGLT
Trigger: AGTTAAACCGAGCCAAATTCAAGGCAAATGGCAATT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCTACCACACGGGTTTaGTCTTTACAACAATCTACT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSTTRV*SLQQST
Trigger: AGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCTACCACACGGGTTTaGTCTTTACAACAATCTACT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSTTRV*SLQQST
Trigger: AGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTATGGGAATTGTTTTCTaGAGAACTGTGCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFMGIVF*RTVPRI
Trigger: AATCCTAGGCACAGTTCTTCAGAAAACAATTCCCAT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAATGGGAATTGTTTTCTaGAGAACTGTGCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKMGIVF*RTVPRI
Trigger: AATCCTAGGCACAGTTCTTCAGAAAACAATTCCCAT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATTGCTTGTGGCATTTaGTGTGGTTCTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGIACGI*CGSPTP
Trigger: AGGGGTGGGAGAACCACATCAAATGCCACAAGCAAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAACAACTGTGAGAGCCTaGTTGTTGGTCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGTTVRA*LLVSSN
Trigger: GTTTGATGAGACCAACAATCAGGCTCTCACAGTTGT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATACAACTGTGAGAGCCTaGTTGTTGGTCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDTTVRA*LLVSSN
Trigger: GTTTGATGAGACCAACAATCAGGCTCTCACAGTTGT...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGATGAGAAACAACTGTaGGAGCCTGATTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGDEKQL*EPDCWS
Trigger: AGACCAACAATCAGGCTCTCACAGTTGTTTCTCATC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTATCAGCTCCGGAGATaGGCACAGGAAGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGYQLRR*AQEGRL
Trigger: AAGTCTTCCTTCCTGTGCTCATCTCCGGAGCTGATA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAATGTTCTACCACACCCTaGTTGTACTTGAGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: AVECRSGMSEQSMETSDKCSTTP*LYLSFK
Trigger: TTTAAAACTCAAGTACAATCAGGGTGTGGTAGAACA...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTTGCGCACTCTGCTCTaGCTTCTGGATGACAACTTC +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLRTLL*LLDDNF
Trigger: GAAGTTGTCATCCAGAAGTCAGAGCAGAGTGCGCAA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAACAAAACAGAATTATCTaGACAAAACTGGTCAACGTG +
Preference number: 4 (lower is better)
Translates to: AVECRSGMSEQSMETSDKQNRII*TKLVNV
Trigger: CACGTTGACCAGTTTTGTTCAGATAATTCTGTTTTG...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGAAGTCCCTCATTCTaGAAGCCGTTGTTCGCAGTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGSPSF*KPLFAV
Trigger: GACTGCGAACAACGGCTTTCAGAATGAGGGACTTCC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAATTATCATTAGAGTCTaGTGGAAGTCCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKIIIRV*WKSLIL
Trigger: CAGAATGAGGGACTTCCATCAGACTCTAATGATAAT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTATTATCATTAGAGTCTaGTGGAAGTCCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFIIIRV*WKSLIL
Trigger: CAGAATGAGGGACTTCCATCAGACTCTAATGATAAT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTGGAATATTTCAGACTaGCGGCCCTCAGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGWNISD*RPSVTL
Trigger: CAAAGTGACTGAGGGCCGGCAGTCTGAAATATTCCA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCTCTTGCAGCACCCGTaGATACATATCCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLLQHP*IHIHFG
Trigger: TCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGCATTTAAGCCTTCATaGGTGGCCTTCAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGAFKPS*VAFSSA
Trigger: GGCACTACTGAAGGCCACGCATGAAGGCTTAAATGC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTTACATCTGGACTCTaGTTCAGGTGTGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFTSGL*FRCAFK
Trigger: CTTAAATGCACACCTGAAGCAGAGTCCAGATGTAAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTCCTTGCCAGTACTCTaGTGTGTGTCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSLPVL*CVSSSS
Trigger: TGATGAGGAAGACACACAGCAGAGTACTGGCAAGGA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGTGTACAAATATGGATaGTTCTGTCAGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYVYKYG*FCQSFQ
Trigger: TTGGAAGGACTGACAGAAGCATCCATATTTGTACAC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGTTTTCCTGGCAATTaGTTGTGGCATTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGFPGN*LWHLMW
Trigger: CCACATCAAATGCCACAAGCAATTGCCAGGAAAACC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCAAAGAAAAGGATGTTaGAGCTCGGCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGQRKGC*SSALTP
Trigger: AGGGGTAAGGGCCGAGCTGCAACATCCTTTTCTTTG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAGAAATTACACTCTCCTaGAGAATTGCAGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: AVECRSGMSEQSMETSDKEITLS*RIAVEC
Trigger: ACATTCAACTGCAATTCTGCAGGAGAGTGTAATTTC...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATATAAACTGTGTTCGTTaGATGTTTGGTGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYINCVR*MFGGLR
Trigger: TCTGAGACCACCAAACATGCAACGAACACAGTTTAT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGAAGATGTGCCAACTaGTTGGGTACAGGGACATGC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGRCAN*LGTGTC
Trigger: GCATGTCCCTGTACCCAAGCAGTTGGCACATCTTCC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACAATATTGCGCACTCTaGTCTGACTTCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGQYCAL*SDFWMT
Trigger: TGTCATCCAGAAGTCAGAGCAGAGTGCGCAATATTG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCGGGTTTGGAACTTTCTaGTTGTTGGCTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPGFGTF*LLASCF
Trigger: GAAACAGGAAGCCAACAAGCAGAAAGTTCCAAACCC...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCCACCAGAAAATGCCTaGGGTACTGCACACAGTTCC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVPPENA*GTAHSS
Trigger: GGAACTGTGTGCAGTACCGCAGGCATTTTCTGGTGG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCCTCAGCTTGTCTGTaGAATATTTCAGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPSACL*NISDCR
Trigger: CCGGCAGTCTGAAATATTCCACAGACAAGCTGAGGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATCATACATATCCACTTTaGACTGAGAAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNHTYPL*TEKGAG
Trigger: ACCAGCTCCTTTCTCAGTCCAAAGTGGATATGTATG...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCAAACTTTGAGGGCTTaGAAGCTGCTTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVQTLRA*KLLALP
Trigger: GGGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGTTTG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCACCTGATGCTCAGTaGTCCCATTACTATAATGGA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPPDAQ*SHYYNG
Trigger: TCCATTATAGTAATGGGACCACTGAGCATCAGGTGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTAAGCCTTCATGCGTaGCCTTCAGTAGTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVLSLHA*PSVVPA
Trigger: TGCGGGCACTACTGAAGGCCACGCATGAAGGCTTAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAATAACACATTTCCTGTaGTTCCGTCATCCACAATGT +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSITHFL*FRHPQC
Trigger: ACATTGTGGATGACGGAACCACAGGAAATGTGTTAT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTCGATCTCCAAACATaGAGTCTGGAGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLDLQT*SLEVWG
Trigger: TCCCCAAACCTCCAGACTCCATGTTTGGAGATCGAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCAAAGTCTCGTCCAATaGGATCGTGATCCCACACAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGQSLVQ*DRDPTQ
Trigger: TTGTGTGGGATCACGATCCCATTGGACGAGACTTTG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCATCTTGATCTCTTGTaGCCTCGGACACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGHLDLL*PRTQNP
Trigger: AGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAGCCAAATGCTGCTTTaGGGAGAGAGACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVSQMLL*GERLAG
Trigger: CCCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGCCTGACATCACACTaGTATTATGAAGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGLTSH*YYEDEK
Trigger: TTTCTCATCTTCATAATACCAGTGTGATGTCAGGCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTAGGCAAGGGACAATaGCCTGACATCACACTGGTA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLGKGQ*PDITLV
Trigger: TACCAGTGTGATGTCAGGCCATTGTCCCTTGCCTAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATGTTCGTTGCATGTTTaGTGGTCTCAGAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGCSLHV*WSQNSR
Trigger: TCTCGAGTTCTGAGACCACCAAACATGCAACGAACA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATGGGGCACACAGGTCTaGAACATTTTTGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGWGTQV*NIFASE
Trigger: TTCAGATGCAAAAATGTTCCAGACCTGTGTGCCCCA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGATGTGCCAACTGCTTaGGTACAGGGACATGCATAT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGDVPTA*VQGHAY
Trigger: ATATGCATGTCCCTGTACCCAAGCAGTTGGCACATC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTTGAATATAGCACTTaGCAGTTGTCTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFFEYST*QLSSWS
Trigger: TGACCAGGAAGACAACTGCCAAGTGCTATATTCAAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCCGGGGGAGCTGATTaGCATCCTGCTTTGAATATA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPGGAD*HPALNI
Trigger: TATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCCATTGCTGGGGTTTaGAACTTTCTGCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPIAGV*NFLLVG
Trigger: GCCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGATTCACTGCAGGGGTaGGTGCTGAGGGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVDSLQG*VLRVCF
Trigger: GAAACAAACCCTCAGCACCCACCCCTGCAGTGAATC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 72 bp GAACTGCCCGGCTCATTCTCATTTGTTAAAGTGACATaGTCAATAAGATGGGAAATTACACTCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ELPGSFSFVKVT*SIRWEITLSCR
Trigger: TCTGCAGGAGAGTGTAATTTCCCATCTTATTGACAATGTCACTTTAACAAATGAGAATGAGCCGGGCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
3UTR CAA 72 bp AAACTCTTACTAATACACTGGTACTTGCTCTCAAAATaGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KLLLIHWYLLSK*QAMSSDVKSPR
Trigger: TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACTTCAAACTTCTTTATaGTGTCAAGACAATAGTCCG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKLQTSL*CQDNSP
Trigger: CGGACTATTGTCTTGACATCATAAAGAAGTTTGAAG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTTCAAACTTCTTTATaGTGTCAAGACAATAGTCCG +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLQTSL*CQDNSP
Trigger: CGGACTATTGTCTTGACATCATAAAGAAGTTTGAAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATATCCACTTTGGACTaGGAAAGGAGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGISTLD*ERSWSP
Trigger: TGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCCCTGTATCAACAGATaGCAGGTCCAGTTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVPCINR*QVQFVS
Trigger: GGAGACAAACTGGACCTGTCATCTGTTGATACAGGG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATACTATAATGGAGCTTaGATTTGCACTCGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKYYNGA*ICTRLQ
Trigger: TTGAAGACGAGTGCAAATTCAAGCTCCATTATAGTA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTATGAAAGATTCCACCTaGTGCTCAGTGGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGMKDST*CSVVPL
Trigger: TAATGGGACCACTGAGCATCAGGTGGAATCTTTCAT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGAGGGATCGTCCATGTaGTTTCTTTCCACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGEGSSM*FLSTFL
Trigger: AAGGAAAGTGGAAAGAAATCACATGGACGATCCCTC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCACCAGAGAAAGGGTTaGAAGTACCTTTGCACATTT +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPHQRKG*KYLCTF
Trigger: AAATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTG...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCAGGCACTAAGCTGCTaGAGGTCACAGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVQALSC*RSQFFV
Trigger: GACAAAGAACTGTGACCTTCAGCAGCTTAGTGCCTG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTATTGCTTGTGGCATTTaGTGTGGTTCTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVIACGI*CGSPTP
Trigger: AGGGGTGGGAGAACCACATCAAATGCCACAAGCAAT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGAAAGGACGCTTCCTaGCAAGATGCTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGRKDAS*QDAFPF
Trigger: GAAGGGAAAAGCATCTTGTCAGGAAGCGTCCTTTCT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCAAGGGACAATGGCCTaGCATCACACTGGTATTATG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGQGTMA*HHTGIM
Trigger: CATAATACCAGTGTGATGTCAGGCCATTGTCCCTTG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAAAGGAGAAGCAAGTTaGCTTGTGCCCTCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGKGEAS*LVPSLL
Trigger: TAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGTTCTACCACACCCTaGTTGTACTTGAGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSCSTTP*LYLSFK
Trigger: TTTAAAACTCAAGTACAATCAGGGTGTGGTAGAACA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTGTTCTACCACACCCTaGTTGTACTTGAGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYCSTTP*LYLSFK
Trigger: TTTAAAACTCAAGTACAATCAGGGTGTGGTAGAACA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATTTTCTCAAACCTCTTTaGAAGTGTTCTACCACACCC +
Preference number: 4 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDFLKPL*KCSTTP
Trigger: GGGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAA...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTGCGCACTCTGCTCTaGCTTCTGGATGACAACTTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVLRTLL*LLDDNF
Trigger: GAAGTTGTCATCCAGAAGTCAGAGCAGAGTGCGCAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACAAAACAGAATTATCTaGACAAAACTGGTCAACGTG +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKQNRII*TKLVNV
Trigger: CACGTTGACCAGTTTTGTTCAGATAATTCTGTTTTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAACAGGGAGAACACATaGAGTCAAAGGGAGACCCAA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGNRENT*SQRETQ
Trigger: TTGGGTCTCCCTTTGACTTCATGTGTTCTCCCTGTT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTACTGCATCACACTCATaGATCTTTCAACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFTASHS*IFQLFL
Trigger: CAGAAAAAGTTGAAAGATGCATGAGTGTGATGCAGT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340059.11
ENST00000447496.6
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATCTGTGTCCCGGACTaGATCACACTCATGCATCTT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGICVPD*ITLMHL
Trigger: AAGATGCATGAGTGTGATGCAGTCCGGGACACAGAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGCATTTAAGCCTTCATaGGTGGCCTTCAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVAFKPS*VAFSSA
Trigger: GGCACTACTGAAGGCCACGCATGAAGGCTTAAATGC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGTTACTGGAATCAATaGGGTAGGCAGAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSYWNQ*GRQRGK
Trigger: TTTACCCCTCTGCCTACCGCATTGATTCCAGTAACT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCTTGGCTCGGTTTAACTaGATCATTCGTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPLARFN*IIRPSD
Trigger: ATCTGAAGGACGAATGATGCAGTTAAACCGAGCCAA...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCTTGGAAGCCCATTTTaGTCTTTTTCCTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLGSPF*SFSCLW
Trigger: CCAAAGGCAGGAAAAAGAGCAAAATGGGCTTCCAAG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGAAATTACACTCTCCTaGAGAATTGCAGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKEITLS*RIAVEC
Trigger: ACATTCAACTGCAATTCTGCAGGAGAGTGTAATTTC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACTGGTTTATCATCACTaGTTGGCTCAGTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLVYHH*LAQSAK
Trigger: TTTTGCAGACTGAGCCAAGCAGTGATGATAAACCAG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAATTCACATCTAGGGCATaGACATATTTCATACTGATA +
Preference number: 4 (lower is better)
Translates to: AVECRSGMSEQSMETSDKFTSRA*TYFILI
Trigger: TATCAGTATGAAATATGTGCATGCCCTAGATGTGAA...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTGTCCACCAGAAAATaGCTGCGGTACTGCACACAG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVLSTRK*LRYCTQ
Trigger: CTGTGTGCAGTACCGCAGGCATTTTCTGGTGGACAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCTTGGTACACTTCATaGTGCAATGGGTTAAATATG +
Preference number: 4 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSWYTS*CNGLNM
Trigger: CATATTTAACCCATTGCACCATGAAGTGTACCAAGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACATACATATCCACTTTaGACTGAGAAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGHTYPL*TEKGAG
Trigger: ACCAGCTCCTTTCTCAGTCCAAAGTGGATATGTATG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTACCATGATGTACTACTaGCTCTCCATCTGGGCCATC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVTMMYY*LSIWAI
Trigger: GATGGCCCAGATGGAGAGCCAGTAGTACATCATGGT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTACTTTCCTTTACATCTaGACTCTGCTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGTFLYI*TLLQVC
Trigger: GCACACCTGAAGCAGAGTCCAGATGTAAAGGAAAGT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCATCTTGATCTCTTGTaGCCTCGGACACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGHLDLL*PRTQNP
Trigger: AGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTGTGGAGCAGAGCACTaGAGGAGGATGATAACTTTT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGCGAEH*RRMITF
Trigger: AAAAGTTATCATCCTCCTCCAGTGCTCTGCTCCACA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTTGGTCTCATCAAACTaGCCAATCAGGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLVSSN*PIRAEM
Trigger: CATCTCAGCCCTGATTGGCCAGTTTGATGAGACCAA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGATGTGCCAACTGCTTaGGTACAGGGACATGCATAT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGDVPTA*VQGHAY
Trigger: ATATGCATGTCCCTGTACCCAAGCAGTTGGCACATC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCTGAAACATTTGTCTaGCTTTTCTTCGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPETFV*LFFGAD
Trigger: ATCTGCCCCGAAGAAAAGTCAGACAAATGTTTCAGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATGCTGGATACTGCAGTaGTTCTCGATAGACAATATA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGCWILQ*FSIDNI
Trigger: TATATTGTCTATCGAGAATCACTGCAGTATCCAGCA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATGAAAGATTCCACCTaGTGCTCAGTGGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGMKDST*CSVVPL
Trigger: TAATGGGACCACTGAGCATCAGGTGGAATCTTTCAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGAGGGATCGTCCATGTaGTTTCTTTCCACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGEGSSM*FLSTFL
Trigger: AAGGAAAGTGGAAAGAAATCACATGGACGATCCCTC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTTCCAAAGTTGGTCATaGGGGATCGTCCATGTGATT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGFQSWS*GIVHVI
Trigger: AATCACATGGACGATCCCTCATGACCAACTTTGGAA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCACCAGAGAAAGGGTTaGAAGTACCTTTGCACATTT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGHQRKG*KYLCTF
Trigger: AAATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATCTACCACACGGGTTTaGTCTTTACAACAATCTACT +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSTTRV*SLQQST
Trigger: AGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAGAAAGGACGCTTCCTaGCAAGATGCTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVRKDAS*QDAFPF
Trigger: GAAGGGAAAAGCATCTTGTCAGGAAGCGTCCTTTCT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGAGCATGGAGACGTCTaGCAAAGAAAAGGATGTTGC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVEHGDV*QRKGCC
Trigger: GCAACATCCTTTTCTTTGTCAGACGTCTCCATGCTC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAAAGGAGAAGCAAGTTaGCTTGTGCCCTCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVKGEAS*LVPSLL
Trigger: TAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTTCTCAAACCTCTTTaGAAGTGTTCTACCACACCC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGFLKPL*KCSTTP
Trigger: GGGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAACAGGGAGAACACATaGAGTCAAAGGGAGACCCAA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVNRENT*SQRETQ
Trigger: TTGGGTCTCCCTTTGACTTCATGTGTTCTCCCTGTT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATTTTACATCTGGACTCTaGTTCAGGTGTGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDFTSGL*FRCAFK
Trigger: CTTAAATGCACACCTGAAGCAGAGTCCAGATGTAAA...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTACTGGAATCAATaGGGTAGGCAGAGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGSYWNQ*GRQRGK
Trigger: TTTACCCCTCTGCCTACCGCATTGATTCCAGTAACT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTGGCTCGGTTTAACTaGATCATTCGTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLARFN*IIRPSD
Trigger: ATCTGAAGGACGAATGATGCAGTTAAACCGAGCCAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGAGGTTTGGGGAGTTaGTGTCCACTGATAACTTTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGGLGS*CPLITF
Trigger: GAAAGTTATCAGTGGACAGCAACTCCCCAAACCTCC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTGTACAAATATGGATaGTTCTGTCAGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDVYKYG*FCQSFQ
Trigger: TTGGAAGGACTGACAGAAGCATCCATATTTGTACAC...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTTTCTGAAGAACTGTaGCTAGGATTCTTATTGAAC +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYFSEEL*LGFLLN
Trigger: GTTCAATAAGAATCCTAGGCACAGTTCTTCAGAAAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTTGGAAGCCCATTTTaGTCTTTTTCCTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLGSPF*SFSCLW
Trigger: CCAAAGGCAGGAAAAAGAGCAAAATGGGCTTCCAAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTGATTTTCACACCATaGAGATCTTGTGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLIFTP*RSCVGL
Trigger: TAACCCCACACAAGATCTGCATGGTGTGAAAATCAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCGCTTCCTGACAAGATaGTTTTCCCTTCCACAAAGT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGRFLTR*FSLPQS
Trigger: ACTTTGTGGAAGGGAAAAGCATCTTGTCAGGAAGCG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAATAAACTGTGTTCGTTaGATGTTTGGTGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGINCVR*MFGGLR
Trigger: TCTGAGACCACCAAACATGCAACGAACACAGTTTAT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAAGCAAGTTGACTTGTaGCCTCTCTCCTATATTCAC +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGKQVDL*PLSYIH
Trigger: GTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTACTTGCTCTCAAAATTaGAGGCAATGTCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGTCSQN*RQCPLM
Trigger: CATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTACTTTCCTTTACATCTaGACTCTGCTTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGTFLYI*TLLQVC
Trigger: GCACACCTGAAGCAGAGTCCAGATGTAAAGGAAAGT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAACCAAAGCTATTTCTaGCATGTGTACTGTAAATGT +
Preference number: 4 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYNQSYF*HVYCKC
Trigger: ACATTTACAGTACACATGCCAGAAATAGCTTTGGTT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTGTTCGTTGCATGTTTaGTGGTCTCAGAACTCGAGA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGCSLHV*WSQNSR
Trigger: TCTCGAGTTCTGAGACCACCAAACATGCAACGAACA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTGGCAGTTGTCTTCCTaGTCAAAGGACACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVWQLSS*SKDTSF
Trigger: GAAGCTTGTGTCCTTTGACCAGGAAGACAACTGCCA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTTGAATATAGCACTTaGCAGTTGTCTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGFEYST*QLSSWS
Trigger: TGACCAGGAAGACAACTGCCAAGTGCTATATTCAAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTATACTATAATGGAGCTTaGATTTGCACTCGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLYYNGA*ICTRLQ
Trigger: TTGAAGACGAGTGCAAATTCAAGCTCCATTATAGTA...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAATCATGAACTGCTCTaGTTTTTGCTGAACAACCTG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGNHELL*FLLNNL
Trigger: CAGGTTGTTCAGCAAAAATCAGAGCAGTTCATGATT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTATGGGAATTGTTTTCTaGAGAACTGTGCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGMGIVF*RTVPRI
Trigger: AATCCTAGGCACAGTTCTTCAGAAAACAATTCCCAT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTATTTCTAGGTTGCTATaGGAAAGGACGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVISRLL*ERTLPD
Trigger: GTCAGGAAGCGTCCTTTCTCATAGCAACCTAGAAAT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGATGAGAAACAACTGTaGGAGCCTGATTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVDEKQL*EPDCWS
Trigger: AGACCAACAATCAGGCTCTCACAGTTGTTTCTCATC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTTTGTGACTGCAATCTaGGGACACAGTAAAGGACAT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGFVTAI*GHSKGH
Trigger: ATGTCCTTTACTGTGTCCTCAGATTGCAGTCACAAA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAGTTGCTTGGTTCCCTaGAGGAAAAGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVSCLVP*RKRVSS
Trigger: AGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAACT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAACTGCATCACACTCATaGATCTTTCAACTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLTASHS*IFQLFL
Trigger: CAGAAAAAGTTGAAAGATGCATGAGTGTGATGCAGT...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTTACATCTGGACTCTaGTTCAGGTGTGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGFTSGL*FRCAFK
Trigger: CTTAAATGCACACCTGAAGCAGAGTCCAGATGTAAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGTGTACAAATATGGATaGTTCTGTCAGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGVYKYG*FCQSFQ
Trigger: TTGGAAGGACTGACAGAAGCATCCATATTTGTACAC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTGATTTTCACACCATaGAGATCTTGTGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLIFTP*RSCVGL
Trigger: TAACCCCACACAAGATCTGCATGGTGTGAAAATCAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCCTTGCAAAAACCATaGTTGATGGGCATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPLQKP*LMGIFR
Trigger: CCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCAATATTGCGCACTCTaGTCTGACTTCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVQYCAL*SDFWMT
Trigger: TGTCATCCAGAAGTCAGAGCAGAGTGCGCAATATTG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGGTTTGGAACTTTCTaGTTGTTGGCTTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGFGTF*LLASCF
Trigger: GAAACAGGAAGCCAACAAGCAGAAAGTTCCAAACCC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTGGTTTATCATCACTaGTTGGCTCAGTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLVYHH*LAQSAK
Trigger: TTTTGCAGACTGAGCCAAGCAGTGATGATAAACCAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAACTGCATCACACTCATaGATCTTTCAACATGAAACA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGTASHS*IFQHET
Trigger: TGTTTCATGTTGAAAGATGCATGAGTGTGATGCAGT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATCTTGGTACACTTCATaGTGCAATGGGTTAAATATG +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSWYTS*CNGLNM
Trigger: CATATTTAACCCATTGCACCATGAAGTGTACCAAGA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTATAACACATTTCCTGTaGTTCCGTCATCCACAATGT +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGITHFL*FRHPQC
Trigger: ACATTGTGGATGACGGAACCACAGGAAATGTGTTAT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGCCTGACATCACACTaGTATTATGAAGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGLTSH*YYEDEK
Trigger: TTTCTCATCTTCATAATACCAGTGTGATGTCAGGCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTGGGGCACACAGGTCTaGAACATTTTTGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVWGTQV*NIFASE
Trigger: TTCAGATGCAAAAATGTTCCAGACCTGTGTGCCCCA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTGTCAGAAGATTTCTaGCACAGCATCAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLSEDF*HSIKTK
Trigger: TTTGGTTTTGATGCTGTGCCAGAAATCTTCTGACAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTACTATAATGGAGCTTaGATTTGCACTCGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGYYNGA*ICTRLQ
Trigger: TTGAAGACGAGTGCAAATTCAAGCTCCATTATAGTA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAATTGCCATTTGCCTTaGATTTGGCTCGGTTTAACT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGNCHLP*IWLGLT
Trigger: AGTTAAACCGAGCCAAATTCAAGGCAAATGGCAATT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTCTACCACACGGGTTTaGTCTTTACAACAATCTACT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGSTTRV*SLQQST
Trigger: AGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATGGGAATTGTTTTCTaGAGAACTGTGCCTAGGATT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGMGIVF*RTVPRI
Trigger: AATCCTAGGCACAGTTCTTCAGAAAACAATTCCCAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTGTTCTACCACACCCTaGTTGTACTTGAGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGCSTTP*LYLSFK
Trigger: TTTAAAACTCAAGTACAATCAGGGTGTGGTAGAACA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTTCTCAAACCTCTTTaGAAGTGTTCTACCACACCC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVFLKPL*KCSTTP
Trigger: GGGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTGGCTCGGTTTAACTaGATCATTCGTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVLARFN*IIRPSD
Trigger: ATCTGAAGGACGAATGATGCAGTTAAACCGAGCCAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGTGTACAAATATGGATaGTTCTGTCAGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGVYKYG*FCQSFQ
Trigger: TTGGAAGGACTGACAGAAGCATCCATATTTGTACAC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTTTCTGAAGAACTGTaGCTAGGATTCTTATTGAAC +
Preference number: 4 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGFSEEL*LGFLLN
Trigger: GTTCAATAAGAATCCTAGGCACAGTTCTTCAGAAAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATTTTTCTGAAGAACTGTaGCTAGGATTCTTATTGAAC +
Preference number: 4 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDFSEEL*LGFLLN
Trigger: GTTCAATAAGAATCCTAGGCACAGTTCTTCAGAAAA...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTTGATTTTCACACCATaGAGATCTTGTGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLIFTP*RSCVGL
Trigger: TAACCCCACACAAGATCTGCATGGTGTGAAAATCAA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCCCTTGCAAAAACCATaGTTGATGGGCATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVPLQKP*LMGIFR
Trigger: CCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATAAACTGTGTTCGTTaGATGTTTGGTGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGINCVR*MFGGLR
Trigger: TCTGAGACCACCAAACATGCAACGAACACAGTTTAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTACTGCATCACACTCATaGATCTTTCAACATGAAACA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGTASHS*IFQHET
Trigger: TGTTTCATGTTGAAAGATGCATGAGTGTGATGCAGT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCATACATATCCACTTTaGACTGAGAAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVHTYPL*TEKGAG
Trigger: ACCAGCTCCTTTCTCAGTCCAAAGTGGATATGTATG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTGTCAGAACAGAGCATaGAGACGTCTGACAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVCQNRA*RRLTKK
Trigger: TTTCTTTGTCAGACGTCTCCATGCTCTGTTCTGACA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGTACAACAGGTAGTTTaGCAACTCGCTTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVVQQVV*QLASCY
Trigger: GTAACAAGAAGCGAGTTGCCAAACTACCTGTTGTAC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTGCTGGATACTGCAGTaGTTCTCGATAGACAATATA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVCWILQ*FSIDNI
Trigger: TATATTGTCTATCGAGAATCACTGCAGTATCCAGCA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAATCATGAACTGCTCTaGTTTTTGCTGAACAACCTG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVNHELL*FLLNNL
Trigger: CAGGTTGTTCAGCAAAAATCAGAGCAGTTCATGATT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAATTGCCATTTGCCTTaGATTTGGCTCGGTTTAACT +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVNCHLP*IWLGLT
Trigger: AGTTAAACCGAGCCAAATTCAAGGCAAATGGCAATT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCAAAACAGAATTATCTaGACAAAACTGGTCAACGTG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGQNRII*TKLVNV
Trigger: CACGTTGACCAGTTTTGTTCAGATAATTCTGTTTTG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTTACATCTGGACTCTaGTTCAGGTGTGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVFTSGL*FRCAFK
Trigger: CTTAAATGCACACCTGAAGCAGAGTCCAGATGTAAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGAAATTACACTCTCCTaGAGAATTGCAGTTGAATGT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGEITLS*RIAVEC
Trigger: ACATTCAACTGCAATTCTGCAGGAGAGTGTAATTTC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCACATCTAGGGCATaGACATATTTCATACTGATA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGFTSRA*TYFILI
Trigger: TATCAGTATGAAATATGTGCATGCCCTAGATGTGAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTCTTGGTACACTTCATaGTGCAATGGGTTAAATATG +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGSWYTS*CNGLNM
Trigger: CATATTTAACCCATTGCACCATGAAGTGTACCAAGA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGCCTGACATCACACTaGTATTATGAAGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGLTSH*YYEDEK
Trigger: TTTCTCATCTTCATAATACCAGTGTGATGTCAGGCC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTTGAATATAGCACTTaGCAGTTGTCTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVFEYST*QLSSWS
Trigger: TGACCAGGAAGACAACTGCCAAGTGCTATATTCAAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCTTCAAACTTCTTTATaGTGTCAAGACAATAGTCCG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVLQTSL*CQDNSP
Trigger: CGGACTATTGTCTTGACATCATAAAGAAGTTTGAAG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTACTATAATGGAGCTTaGATTTGCACTCGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVYYNGA*ICTRLQ
Trigger: TTGAAGACGAGTGCAAATTCAAGCTCCATTATAGTA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR TCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCAAAACAGAATTATCTaGACAAAACTGGTCAACGTG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVQNRII*TKLVNV
Trigger: CACGTTGACCAGTTTTGTTCAGATAATTCTGTTTTG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTTCACATCTAGGGCATaGACATATTTCATACTGATA +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGFTSRA*TYFILI
Trigger: TATCAGTATGAAATATGTGCATGCCCTAGATGTGAA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTCTTGGTACACTTCATaGTGCAATGGGTTAAATATG +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVSWYTS*CNGLNM
Trigger: CATATTTAACCCATTGCACCATGAAGTGTACCAAGA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAACCAAAGCTATTTCTaGCATGTGTACTGTAAATGT +
Preference number: 4 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGNQSYF*HVYCKC
Trigger: ACATTTACAGTACACATGCCAGAAATAGCTTTGGTT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
3UTR CAA 72 bp TTCAAAAGTACAACAGGTAGTTTGGCAACTCGCTTCTaGTTACATACAAAGCCATTAGCAAAAATATGTAAC +
Preference number: 4 (lower is better)
Translates to: FKSTTGSLATRF*LHTKPLAKICN
Trigger: GTTACATATTTTTGCTAATGGCTTTGTATGTAACAAGAAGCGAGTTGCCAAACTACCTGTTGTACTTTTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTTTCTGAAGAACTGTaGCTAGGATTCTTATTGAAC +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVFSEEL*LGFLLN
Trigger: GTTCAATAAGAATCCTAGGCACAGTTCTTCAGAAAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR GCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTCACATCTAGGGCATaGACATATTTCATACTGATA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVFTSRA*TYFILI
Trigger: TATCAGTATGAAATATGTGCATGCCCTAGATGTGAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CCA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAACTCTCATTATGGGTaGGATAAGAACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVNSHYG*DKNILK
Trigger: TTTTAGGATGTTCTTATCCCACCCATAATGAGAGTT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS CCA 90 bp AGGACTCCTCGGAGTCCGTGGCACAAGGAGCCACCTCCGAAGTGCTaGGGTGATGAGTTATTGGCCCCTGTGACTCCAACTCCAAACCCC +
Preference number: 5 (lower is better)
Translates to: RTPRSPWHKEPPPKC*GDELLAPVTPTPNP
Trigger: GGGGTTTGGAGTTGGAGTCACAGGGGCCAATAACTCATCACCCCAGCACTTCGGAGGTGGCTCCTTGTGCCACGGACTCCGAGGAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS-3UTR CAA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCCACACCATGCAGATCTaGTGTGGGGTTAACTACAGG +
Preference number: 5 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGHTMQI*CGVNYR
Trigger: CCTGTAGTTAACCCCACACAAGATCTGCATGGTGTG...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCGATGACAGGTCCAGTTaGTCTCCGAATATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGDDRSS*SPNIPF
Trigger: GAAAGGAATATTCGGAGACAAACTGGACCTGTCATC...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS GCA 90 bp AAGCACGCTGGAAGCATCTGCTCGGGGCTGCCGCTATTGTGGGAATaGAGGCGCTGTGGCTACTTTGGGTATGAGACATGCATGCTTCGT +
Preference number: 5 (lower is better)
Translates to: KHAGSICSGLPLLWE*RRCGYFGYETCMLR
Trigger: ACGAAGCATGCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCCAGCGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS GCA 90 bp GAAAAGCACAGCCAGATAAGCACGCTGGAAGCATCTGCTCGGGGCTaGCGCTATTGTGGGAATGCAGGCGCTGTGGCTACTTTGGGTATG +
Preference number: 5 (lower is better)
Translates to: EKHSQISTLEASARG*RYCGNAGAVATLGM
Trigger: CATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCCAGCGTGCTTATCTGGCTGTGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CCA 90 bp CCAGATAAGCACGCTGGAAGCATCTGCTCGGGGCTGCCGCTATTGTaGGAATGCAGGCGCTGTGGCTACTTTGGGTATGAGACATGCATG +
Preference number: 5 (lower is better)
Translates to: PDKHAGSICSGLPLL*ECRRCGYFGYETCM
Trigger: CATGCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCCAGCGTGCTTATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS-3UTR CAA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCAACAGCGACAGCCCTCTaGCAGCACCCGTGCATACAT +
Preference number: 5 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRATATAL*QHPCIH
Trigger: ATGTATGCACGGGTGCTGCAAGAGGGCTGTCGCTGT...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCTCACCAGAGAAAGGGTaGAAAGTACCTTTGCACATT +
Preference number: 5 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGSPEKG*KVPLHI
Trigger: AATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTGA...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCTATCTCCACCATTTCTaGGAAGCCCATTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGYLHHF*EAHFAL
Trigger: AAGAGCAAAATGGGCTTCCAAGAAATGGTGGAGATA...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GGCCATAGTGAAGAGCCGTGCATGCCCCCTCTGGGATGCCCCGGCCTTCAAGGCTACTTGCTCTCAAAATaGCAGGCAATGTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: GHSEEPCMPPLGCPGLQGYLLSK*QAMSSD
Trigger: ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTA...GCCTTGAAGGCCGGGGCATCCCAGAGGGGGCATGCACGGCTCTTCACTATGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS TCA 90 bp GCTGCCGCTATTGTGGGAATGCAGGCGCTGTGGCTACTTTGGGTATaGGACATGCATGCTTCGTGCAGCGCGTTAAAGCCCTCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: AAAIVGMQALWLLWV*DMHASCSALKPSRH
Trigger: ATGCCTTGAGGGCTTTAACGCGCTGCACGAAGCATGCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS-3UTR CAA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTGGGCTTGGAAGCTGCTaGCACTCCCCTGTATCAACA +
Preference number: 5 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFGLGSC*HSPVST
Trigger: TGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCCC...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS TCA 90 bp GGGCGTGCTTGCAAACTGCGTGTGGTCCTCCTCAGCACGCCATCTTaGTCTCTTGTGGCCTCGGACACAGAATCCTTTATCTCCACCATT +
Preference number: 5 (lower is better)
Translates to: GRACKLRVVLLSTPS*SLVASDTESFISTI
Trigger: AATGGTGGAGATAAAGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 90 bp CAAAGCTCCCAGAAGGTTTCTGTCAACAGGCATAGAGACAGGGCGTaGTTGCAAACTGCGTGTGGTCCTCCTCAGCACGCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: QSSQKVSVNRHRDRA*LQTACGPPQHAILI
Trigger: GATCAAGATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATGCCTGTTGACAGAAACCTTCTGGGAGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCGGGCCTCCTCGGGGTaGGAGGTGATGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRASSG*EVMRSR
Trigger: CCTGGACCTCATCACCTCCAACCCCGAGGAGGCCCG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACGGGCCTCCTCGGGGTaGGAGGTGATGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSRASSG*EVMRSR
Trigger: CCTGGACCTCATCACCTCCAACCCCGAGGAGGCCCG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS GCA 90 bp CCAACAGTCAACTTCCACACAGCGACAGCCCTCTTGCAGCACCCGTaGATACATATCCACTTTGGACTGAGAAAGGAGCTGGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PTVNFHTATALLQHP*IHIHFGLRKELVSS
Trigger: ACTGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAGGGCTGTCGCTGTGTGGAAGTTGACTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGATGGAGTCTGGAGGTTaGGGGAGTTGCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQMESGG*GSCCPL
Trigger: CAGTGGACAGCAACTCCCCAAACCTCCAGACTCCAT...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGGGGGATCCAGGCAGGTaGCTTTCTAAGGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKGDPGR*LSKAAV
Trigger: GACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCCC...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS CCA 90 bp CACAGCGACAGCCCTCTTGCAGCACCCGTGCATACATATCCACTTTaGACTGAGAAAGGAGCTGGTCTCCAGTCAGGTATGTATTGTGAG +
Preference number: 5 (lower is better)
Translates to: HSDSPLAAPVHTYPL*TEKGAGLQSGMYCE
Trigger: CTCACAATACATACCTGACTGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAGGGCTGTCGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 90 bp GCAAACTGCGTGTGGTCCTCCTCAGCACGCCATCTTGATCTCTTGTaGCCTCGGACACAGAATCCTTTATCTCCACCATTTCTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: ANCVWSSSARHLDLL*PRTQNPLSPPFLGS
Trigger: GCTTCCAAGAAATGGTGGAGATAAAGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGGAGGACCACACGCAGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACGGGCCTCCTCGGGGTaGGAGGTGATGAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGRASSG*EVMRSR
Trigger: CCTGGACCTCATCACCTCCAACCCCGAGGAGGCCCG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACATGGGTCCTCTGCCTTTaGGCAAGGGAGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTWVLCL*ARESSS
Trigger: TGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCCA...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTGGGCTGATCCATGTCTaGGTACACTTCATGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VPGGADWHPALNIALGSCGLIHV*VHFMVQ
Trigger: TTGCACCATGAAGTGTACCAAGACATGGATCAGCCC...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CAGTTGTCTTCCTGGTCAAAGGACACAAGCTTCCGAAGCTGCTCGGTCAGGGCAGAAGGTCACAGTTCTTaGTCCAACAAAGTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: QLSSWSKDTSFRSCSVRAEGHSS*SNKVSS
Trigger: GGACGAGACTTTGTTGGACAAAGAACTGTGACCTTC...TGCCCTGACCGAGCAGCTTCGGAAGCTTGTGTCCTTTGACCAGGAAGACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGGCTGCAGCTCTTCAGTGTTTACAGTCACGCCCTTCTaGTCTCTAATGCCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: HPPGSNQGKRQGCSSSVFTVTPF*SLMPVV
Trigger: TACAACTGGCATTAGAGACAAGAAGGGCGTGACTGT...AAACACTGAAGAGCTGCAGCCCTGCCTCTTCCCCTGATTTGACCCTGGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS CCA 90 bp AGTTTGTGTACACAACCAAATCAGAGAGTTCTCGGCAGAGCTTCATaGTTTTCCTTCGGCGACCCAATCTGTACAGCTGGCCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: SLCTQPNQRVLGRAS*FSFGDPICTAGHPP
Trigger: AGGAGGGTGGCCAGCTGTACAGATTGGGTCGCCGAAGGAAAACCATGAAGCTCTGCCGAGAACTCTCTGATTTGGTTGTGTACACAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS-3UTR CAA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGGTGGGTGCTGAGGGTTaGTTTCTAAGAACCACTCCT +
Preference number: 5 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQVGAEG*FLRTTP
Trigger: AGGAGTGGTTCTTAGAAACAAACCCTCAGCACCCAC...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS TCA 90 bp CCAGGTAAAAGAGGCGGACAAGCCCTTTGGTTCCACGTTTCAGCTTaGTCATCTGTGTCCCGGACTGCATCACACTCATGCATCTTTCAA +
Preference number: 5 (lower is better)
Translates to: PGKRGGQALWFHVSA*SSVSRTASHSCIFQ
Trigger: TTGAAAGATGCATGAGTGTGATGCAGTCCGGGACACAGATGATCAAGCTGAAACGTGGAACCAAAGGGCTTGTCCGCCTCTTTTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACCAGCCATCAGGTACTaGAGGCCTGTGATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSPAIRY*RPVIQV
Trigger: CACCTGGATCACAGGCCTCAAGTACCTGATGGCTGG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACCAGCCATCAGGTACTaGAGGCCTGTGATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKPAIRY*RPVIQV
Trigger: CACCTGGATCACAGGCCTCAAGTACCTGATGGCTGG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGGTCTGCTTCACCCATaGGTCATGGGTCCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFGLLHP*VMGPLP
Trigger: AGGCAGAGGACCCATGACCAATGGGTGAAGCAGACC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATACAGCGACAGCCCTCTaGCAGCACCCGTGCATACAT +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYTATAL*QHPCIH
Trigger: ATGTATGCACGGGTGCTGCAAGAGGGCTGTCGCTGT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTGCCCGGGGGAGCTGATTGGCATCCTGCTTTGAATATAGCACTTGGCAGTTGTAGTACCTTTGCACATTaGCTGGGGTTTGAGGACATA +
Preference number: 5 (lower is better)
Translates to: VPGGADWHPALNIALGSCSTFAH*LGFEDI
Trigger: TATGTCCTCAAACCCCAGCAAATGTGCAAAGGTACT...ACAACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATCAGCTCCCCCGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTCTTTTTCCTGCCTTaGGCTGGGGCGCTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLFFLP*AGALAV
Trigger: CACAGCTAGCGCCCCAGCCAAAGGCAGGAAAAAGAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCTCAGCACGCCATCTaGATCTCTTGTGGCCTCGGA +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPQHAI*ISCGLG
Trigger: TCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCACCTCAGCACGCCATCTaGATCTCTTGTGGCCTCGGA +
Preference number: 5 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSPQHAI*ISCGLG
Trigger: TCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGG...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAGAGACAGGGCGTGCTaGCAAACTGCGTGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYRDRAC*QTACGP
Trigger: AGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAGAGACAGGGCGTGCTaGCAAACTGCGTGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKRDRAC*QTACGP
Trigger: AGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACATCCCAGTCTTCTCCCTaGGTAGGACTTTTTGGTAAC +
Preference number: 5 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTSQSSP*VGLFGN
Trigger: GTTACCAAAAAGTCCTACCAAGGGAGAAGACTGGGA...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp AGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGGCAGTATAGCACTTGGCAGTaGTCTTCCTGGTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: REWDQLLHPPGSNQGKRQYSTWQ*SSWSKD
Trigger: GTCCTTTGACCAGGAAGACAACTGCCAAGTGCTATA...CTGCCTCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS TCA 90 bp ACTTTGAGGGCTTGGAAGCTGCTTGCACTCCCCTGTATCAACAGATaGCAGGTCCAGTTTGTCTCCGAATATTCCTTTCAGGTACTGAGC +
Preference number: 5 (lower is better)
Translates to: TLRAWKLLALPCINR*QVQFVSEYSFQVLS
Trigger: GCTCAGTACCTGAAAGGAATATTCGGAGACAAACTGGACCTGTCATCTGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 90 bp TCCTTTACATCTGGACTCTGCTTCAGGTGTGCATTTAAGCCTTCATaGGTGGCCTTCAGTAGTGCCCGCACTGTGAAACTATCAGGATCT +
Preference number: 5 (lower is better)
Translates to: SFTSGLCFRCAFKPS*VAFSSARTVKLSGS
Trigger: AGATCCTGATAGTTTCACAGTGCGGGCACTACTGAAGGCCACGCATGAAGGCTTAAATGCACACCTGAAGCAGAGTCCAGATGTAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAGGCGGACAAGCCCTTaGGTTCCACGTTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRRTSP*VPRFSL
Trigger: CAAGCTGAAACGTGGAACCAAAGGGCTTGTCCGCCT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGGGCTTGGAAGCTGCTaGCACTCCCCTGTATCAACA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYGLGSC*HSPVST
Trigger: TGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCCC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAATGGAGTCTGGAGGTTaGGGGAGTTGCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKMESGG*GSCCPL
Trigger: CAGTGGACAGCAACTCCCCAAACCTCCAGACTCCAT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTATGGAGTCTGGAGGTTaGGGGAGTTGCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFMESGG*GSCCPL
Trigger: CAGTGGACAGCAACTCCCCAAACCTCCAGACTCCAT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCTTGGCTGGTATCTTaGTGGAGCAGAGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPWLVS*WSRALE
Trigger: CTCCAGTGCTCTGCTCCACAAAGATACCAGCCAAGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCCTTGGCTGGTATCTTaGTGGAGCAGAGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYPWLVS*WSRALE
Trigger: CTCCAGTGCTCTGCTCCACAAAGATACCAGCCAAGG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGATACAATGGTGTCCCCTaGGCTGGTATCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ETESGISYYILQGQIRGRYNGVP*AGIFVE
Trigger: CTCCACAAAGATACCAGCCAAGGGGACACCATTGTA...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGAGCCAAATGCTGCTTaGGGGAGAGAGACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKEPNAA*GRETCW
Trigger: CCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCTC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAACCACTCCTGCCCCATaGCTGGGGTTTGGAACTTTC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSTTPAP*LGFGTF
Trigger: GAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGGT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAACCACTCCTGCCCCATaGCTGGGGTTTGGAACTTTC +
Preference number: 5 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSTTPAP*LGFGTF
Trigger: GAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGGT...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS GCA 90 bp GGTCTCCAGTCAGGTATGTATTGTGAGAGGAAGCAATGTAGTAGTTaGAGAGGGGCTGATCCATGTCTTGGTACACTTCATGGTGCAATG +
Preference number: 5 (lower is better)
Translates to: GLQSGMYCERKQCSS*RGADPCLGTLHGAM
Trigger: CATTGCACCATGAAGTGTACCAAGACATGGATCAGCCCCTCTGCAACTACTACATTGCTTCCTCTCACAATACATACCTGACTGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 90 bp GTTGCAGAGGGGCTGATCCATGTCTTGGTACACTTCATGGTGCAATaGGTTAAATATGTCACAGGCAGGACTACGCATGAAGTTCGTGAA +
Preference number: 5 (lower is better)
Translates to: VAEGLIHVLVHFMVQ*VKYVTGRTTHEVRE
Trigger: TTCACGAACTTCATGCGTAGTCCTGCCTGTGACATATTTAACCCATTGCACCATGAAGTGTACCAAGACATGGATCAGCCCCTCTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 90 bp AACAAAAGGGTCAATGATCTCGCCTCGATCTCCAAACATGGAGTCTaGAGGTTTGGGGAGTTGCTGTCCACTGATAACTTTCAGGATGAG +
Preference number: 5 (lower is better)
Translates to: NKRVNDLASISKHGV*RFGELLSTDNFQDE
Trigger: CTCATCCTGAAAGTTATCAGTGGACAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGAGATCGAGGCGAGATCATTGACCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGTTCCACGTTTCAGCTaGATCATCTGTGTCCCGGAC +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKVPRFS*IICVPD
Trigger: GTCCGGGACACAGATGATCAAGCTGAAACGTGGAAC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGTTCCACGTTTCAGCTaGATCATCTGTGTCCCGGAC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSVPRFS*IICVPD
Trigger: GTCCGGGACACAGATGATCAAGCTGAAACGTGGAAC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAGTTCCACGTTTCAGCTaGATCATCTGTGTCCCGGAC +
Preference number: 5 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSVPRFS*IICVPD
Trigger: GTCCGGGACACAGATGATCAAGCTGAAACGTGGAAC...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGGGTCCTCTGCCTTTaGGCAAGGGAGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSWVLCL*ARESSS
Trigger: TGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATCAAACTTTGAGGGCTaGGAAGCTGCTTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKSNFEG*EAACTP
Trigger: GGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGTTTGA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGATGGAGGTTTGGGGAGTaGCTGTCCACTGATAACTTT +
Preference number: 5 (lower is better)
Translates to: ETESGISYYILQGQIRGRWRFGE*LSTDNF
Trigger: AAAGTTATCAGTGGACAGCAACTCCCCAAACCTCCA...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACTCTTTTTCCTGCCTTaGGCTGGGGCGCTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLFFLP*AGALAV
Trigger: CACAGCTAGCGCCCCAGCCAAAGGCAGGAAAAAGAG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCGCCATCTTGATCTCTaGTGGCCTCGGACACAGAAT +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRHLDL*WPRTQN
Trigger: ATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACGCCATCTTGATCTCTaGTGGCCTCGGACACAGAAT +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSRHLDL*WPRTQN
Trigger: ATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCTCAGCACGCCATCTaGATCTCTTGTGGCCTCGGA +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPQHAI*ISCGLG
Trigger: TCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATAGAGACAGGGCGTGCTaGCAAACTGCGTGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDRDRAC*QTACGP
Trigger: AGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCT...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGAAATTGCTTGTGGCATTaGATGTGGTTCTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRNCLWH*MWFSHP
Trigger: GGGGTGGGAGAACCACATCAAATGCCACAAGCAATT...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTATCTTGAGCACTAGATaGCTGGGGCACACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFILSTR*LGHTGL
Trigger: CAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGAT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATATCTTGAGCACTAGATaGCTGGGGCACACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYILSTR*LGHTGL
Trigger: CAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGAT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAAGGGACATGCATATCTaGAGCACTAGATTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AVECRSGMSEQSMETSDKRDMHI*STRLLG
Trigger: CCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCT...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTGCTTGGGTACAGGGACATGCATATCTTGAGCACTAGATTGCTGGGGCACACACTAATACACTGGTACTaGCTCTCAAAATTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LLGYRDMHILSTRLLGHTLIHWY*LSKLQA
Trigger: TGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAG...TGTGTGCCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCTGTACCCAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCCCATTGCTGGGGTTaGGAACTTTCTGCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPHCWG*ELSACW
Trigger: CCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS TCA 90 bp AAGGTCACAGTTCTTTGTCCAACAAAGTCTCGTCCAATGGGATCGTaGTCCCACACAAGGAACCGAACCAAAGCTATTTCTGGCATGTGT +
Preference number: 5 (lower is better)
Translates to: KVTVLCPTKSRPMGS*SHTRNRTKAISGMC
Trigger: ACACATGCCAGAAATAGCTTTGGTTCGGTTCCTTGTGTGGGATCACGATCCCATTGGACGAGACTTTGTTGGACAAAGAACTGTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 90 bp TCACTAGAATTTTGCCTTTCAAACTTTGAGGGCTTGGAAGCTGCTTaGACTCCCCTGTATCAACAGATGACAGGTCCAGTTTGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: SLEFCLSNFEGLEAA*TPLYQQMTGPVCLR
Trigger: TCGGAGACAAACTGGACCTGTCATCTGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGTTTGAAAGGCAAAATTCTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAGGCGGACAAGCCCTTaGGTTCCACGTTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGRRTSP*VPRFSL
Trigger: CAAGCTGAAACGTGGAACCAAAGGGCTTGTCCGCCT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGGGCTGATCCATGTCTaGGTACACTTCATGGTGCAA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYGLIHV*VHFMVQ
Trigger: TTGCACCATGAAGTGTACCAAGACATGGATCAGCCC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGGGCTGATCCATGTCTaGGTACACTTCATGGTGCAA +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSGLIHV*VHFMVQ
Trigger: TTGCACCATGAAGTGTACCAAGACATGGATCAGCCC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTACAGCGACAGCCCTCTaGCAGCACCCGTGCATACAT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGTATAL*QHPCIH
Trigger: ATGTATGCACGGGTGCTGCAAGAGGGCTGTCGCTGT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGGCTTGGAAGCTGCTaGCACTCCCCTGTATCAACA +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGLGSC*HSPVST
Trigger: TGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAATGGAGTCTGGAGGTTaGGGGAGTTGCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGMESGG*GSCCPL
Trigger: CAGTGGACAGCAACTCCCCAAACCTCCAGACTCCAT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTTCAGACCCTGGAGTaGTCTGTTCTTTGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLQTLE*SVLCSS
Trigger: GGAGCTACAAAGAACAGACAACTCCAGGGTCTGAAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340059.11
ENST00000447496.6
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCTCTTTTTCCTGCCTTaGGCTGGGGCGCTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLFFLP*AGALAV
Trigger: CACAGCTAGCGCCCCAGCCAAAGGCAGGAAAAAGAG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCTTGGCTGGTATCTTaGTGGAGCAGAGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPWLVS*WSRALE
Trigger: CTCCAGTGCTCTGCTCCACAAAGATACCAGCCAAGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATACAATGGTGTCCCCTaGGCTGGTATCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKYNGVP*AGIFVE
Trigger: CTCCACAAAGATACCAGCCAAGGGGACACCATTGTA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAATTGCTTGTGGCATTaGATGTGGTTCTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYNCLWH*MWFSHP
Trigger: GGGGTGGGAGAACCACATCAAATGCCACAAGCAATT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp TTAAAGGAGAAGCAAGTTGACTTGTGCCCTCTCTCCTATATTCACAGGTTGTTAGAGCCAAATGCTGCTTaGGGGAGAGAGACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LKEKQVDLCPLSYIHRLLEPNAA*GRETCW
Trigger: CCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCTC...TAACAACCTGTGAATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTCCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGTGTTCGTTGCATGTTaGGTGGTCTCAGAACTCGAG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKVFVAC*VVSELE
Trigger: CTCGAGTTCTGAGACCACCAAACATGCAACGAACAC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCTAAGGCCGCTGTCTaGGCCTTACTAGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSKAAV*ALLERS
Trigger: TGACCTTTCTAGTAAGGCCAAGACAGCGGCCTTAGA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCTAAGGCCGCTGTCTaGGCCTTACTAGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSKAAV*ALLERS
Trigger: TGACCTTTCTAGTAAGGCCAAGACAGCGGCCTTAGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACTGCTCTCCCCAGAATaGAAACAGAGAGTGGGATCA +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKLLSPE*KQRVGS
Trigger: TGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCAG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCTGCTCTCCCCAGAATaGAAACAGAGAGTGGGATCA +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLLSPE*KQRVGS
Trigger: TGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCAG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGGAGAAGCAAGTTGACTaGTGCCCTCTCTCCTATATT +
Preference number: 5 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKEKQVD*CPLSYI
Trigger: AATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTC...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAGGGACATGCATATCTaGAGCACTAGATTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKRDMHI*STRLLG
Trigger: CCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAGGGACATGCATATCTaGAGCACTAGATTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRDMHI*STRLLG
Trigger: CCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAGGGACATGCATATCTaGAGCACTAGATTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSRDMHI*STRLLG
Trigger: CCCCAGCAATCTAGTGCTCAAGATATGCATGTCCCT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAGATGTGCCAACTGCTaGGGTACAGGGACATGCATA +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKRCANC*GTGTCI
Trigger: TATGCATGTCCCTGTACCCAAGCAGTTGGCACATCT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCAGCCATCAGGTACTaGAGGCCTGTGATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPAIRY*RPVIQV
Trigger: CACCTGGATCACAGGCCTCAAGTACCTGATGGCTGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATGGGTCCTCTGCCTTTaGGCAAGGGAGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGWVLCL*ARESSS
Trigger: TGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCCA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGCTTCCTGAAACATTaGTCTGACTTTTCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGFLKH*SDFSSG
Trigger: CCCCGAAGAAAAGTCAGACAAATGTTTCAGGAAGCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGGCTTGGAAGCTGCTaGCACTCCCCTGTATCAACA +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGLGSC*HSPVST
Trigger: TGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGCCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGAGCGGCCACGGAGTTaGTGTACACAACCAAATCAG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGERPRS*CTQPNQ
Trigger: CTGATTTGGTTGTGTACACAAACTCCGTGGCCGCTC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGGGTTGAAAGTACCTTaGCACATTTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKGLKVP*HICWGL
Trigger: CAAACCCCAGCAAATGTGCAAAGGTACTTTCAACCC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGGGTTGAAAGTACCTTaGCACATTTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSGLKVP*HICWGL
Trigger: CAAACCCCAGCAAATGTGCAAAGGTACTTTCAACCC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTGGAGGTTTGGGGAGTaGCTGTCCACTGATAACTTT +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFWRFGE*LSTDNF
Trigger: AAAGTTATCAGTGGACAGCAACTCCCCAAACCTCCA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATGGAGGTTTGGGGAGTaGCTGTCCACTGATAACTTT +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSWRFGE*LSTDNF
Trigger: AAAGTTATCAGTGGACAGCAACTCCCCAAACCTCCA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GCAGTTGAATGTAGGTCAGGTATGTCAGAACAGAGCATGGAGACGTCTGACAAAACAGGGTTAAATCCATaGTCATCTACCACACGGGTT +
Preference number: 5 (lower is better)
Translates to: AVECRSGMSEQSMETSDKTGLNP*SSTTRV
Trigger: AACCCGTGTGGTAGATGACAATGGATTTAACCCTGT...TTTGTCAGACGTCTCCATGCTCTGTTCTGACATACCTGACCTACATTCAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGAAGGTCACAGTTCTTaGTCCAACAAAGTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFEGHSS*SNKVSS
Trigger: GGACGAGACTTTGTTGGACAAAGAACTGTGACCTTC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGAGCCAAATGCTGCTTaGGGGAGAGAGACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGEPNAA*GRETCW
Trigger: CCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCTC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCACACTCTCCTGCAGAATaGCAGTTGAATGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSHSPAE*QLNVGQ
Trigger: CTGACCTACATTCAACTGCAATTCTGCAGGAGAGTG...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GAAACAGAGAGTGGGATCAGCTATTACATCCTCCAGGGTCAAATCAGGGGAAGAGACTTGGATTTTCCCTaGCAAAAACCATGCTTGATG +
Preference number: 5 (lower is better)
Translates to: ETESGISYYILQGQIRGRDLDFP*QKPCLM
Trigger: CATCAAGCATGGTTTTTGCAAGGGAAAATCCAAGTC...TCTTCCCCTGATTTGACCCTGGAGGATGTAATAGCTGATCCCACTCTCTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGGGATCCAGGCAGGTaGCTTTCTAAGGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGDPGR*LSKAAV
Trigger: GACAGCGGCCTTAGAAAGCAACCTGCCTGGATCCCC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTCCCAGTCTTCTCCCTaGGTAGGACTTTTTGGTAAC +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSQSSP*VGLFGN
Trigger: GTTACCAAAAAGTCCTACCAAGGGAGAAGACTGGGA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCCAGACTTTTGGATTaGCAAGGACTAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPRLLD*QGLGSF
Trigger: GAAACTGCCTAGTCCTTGCAAATCCAAAAGTCTGGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAACAGTCACGCCCTTCTaGTCTCTAATGCCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSTVTPF*SLMPVV
Trigger: TACAACTGGCATTAGAGACAAGAAGGGCGTGACTGT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAACAGTCACGCCCTTCTaGTCTCTAATGCCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKTVTPF*SLMPVV
Trigger: TACAACTGGCATTAGAGACAAGAAGGGCGTGACTGT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTATAGCACTTGGCAGTaGTCTTCCTGGTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFYSTWQ*SSWSKD
Trigger: GTCCTTTGACCAGGAAGACAACTGCCAAGTGCTATA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATATAGCACTTGGCAGTaGTCTTCCTGGTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKYSTWQ*SSWSKD
Trigger: GTCCTTTGACCAGGAAGACAACTGCCAAGTGCTATA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCCCATTGCTGGGGTTaGGAACTTTCTGCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPHCWG*ELSACW
Trigger: CCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS GCA 90 bp AGCCCTTTGGTTCCACGTTTCAGCTTGATCATCTGTGTCCCGGACTaGATCACACTCATGCATCTTTCAACTTTTTCTGGACTTAAGTTT +
Preference number: 5 (lower is better)
Translates to: SPLVPRFSLIICVPD*ITLMHLSTFSGLKF
Trigger: AAACTTAAGTCCAGAAAAAGTTGAAAGATGCATGAGTGTGATGCAGTCCGGGACACAGATGATCAAGCTGAAACGTGGAACCAAAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340059.11
ENST00000447496.6
ENST00000494598.5
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCCAGCCATCAGGTACTaGAGGCCTGTGATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVPAIRY*RPVIQV
Trigger: CACCTGGATCACAGGCCTCAAGTACCTGATGGCTGG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGGTCTGCTTCACCCATaGGTCATGGGTCCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVGLLHP*VMGPLP
Trigger: AGGCAGAGGACCCATGACCAATGGGTGAAGCAGACC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGGCTGATCCATGTCTaGGTACACTTCATGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGLIHV*VHFMVQ
Trigger: TTGCACCATGAAGTGTACCAAGACATGGATCAGCCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAACAAAGGCATGCTTGTaGATGGTCTCCACAACATCT +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSTKACL*MVSTTS
Trigger: AGATGTTGTGGAGACCATCAACAAGCATGCCTTTGT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATACAAAGGCATGCTTGTaGATGGTCTCCACAACATCT +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYTKACL*MVSTTS
Trigger: AGATGTTGTGGAGACCATCAACAAGCATGCCTTTGT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATTCACAAAGGCATGCTaGTTGATGGTCTCCACAACA +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSFTKAC*LMVSTT
Trigger: TGTTGTGGAGACCATCAACAAGCATGCCTTTGTGAA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTCACAAAGGCATGCTaGTTGATGGTCTCCACAACA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYFTKAC*LMVSTT
Trigger: TGTTGTGGAGACCATCAACAAGCATGCCTTTGTGAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGATGACAGGTCCAGTTaGTCTCCGAATATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSDDRSS*SPNIPF
Trigger: GAAAGGAATATTCGGAGACAAACTGGACCTGTCATC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGAGCGGCCACGGAGTTaGTGTACACAACCAAATCAG +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGERPRS*CTQPNQ
Trigger: CTGATTTGGTTGTGTACACAAACTCCGTGGCCGCTC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACCATTTGCCTTGAATTaGGCTCGGTTTAACTGCATC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSPFALN*ARFNCI
Trigger: GATGCAGTTAAACCGAGCCAAATTCAAGGCAAATGG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACCATTTGCCTTGAATTaGGCTCGGTTTAACTGCATC +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKPFALN*ARFNCI
Trigger: GATGCAGTTAAACCGAGCCAAATTCAAGGCAAATGG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCCATTTGCCTTGAATTaGGCTCGGTTTAACTGCATC +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFPFALN*ARFNCI
Trigger: GATGCAGTTAAACCGAGCCAAATTCAAGGCAAATGG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAGTACCTTTGCACATTaGCTGGGGTTTGAGGACATA +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFSTFAH*LGFEDI
Trigger: TATGTCCTCAAACCCCAGCAAATGTGCAAAGGTACT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAGTACCTTTGCACATTaGCTGGGGTTTGAGGACATA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSTFAH*LGFEDI
Trigger: TATGTCCTCAAACCCCAGCAAATGTGCAAAGGTACT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGATCTACCACACGGGTTaGATCTTTACAACAATCTAC +
Preference number: 5 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKIYHTG*IFTTIY
Trigger: GTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGAT...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAACAGGGTTAAATCCATaGTCATCTACCACACGGGTT +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSTGLNP*SSTTRV
Trigger: AACCCGTGTGGTAGATGACAATGGATTTAACCCTGT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACTTCAGACCCTGGAGTaGTCTGTTCTTTGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLQTLE*SVLCSS
Trigger: GGAGCTACAAAGAACAGACAACTCCAGGGTCTGAAG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340059.11
ENST00000447496.6
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCGCCATCTTGATCTCTaGTGGCCTCGGACACAGAAT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGRHLDL*WPRTQN
Trigger: ATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATACAATGGTGTCCCCTaGGCTGGTATCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGYNGVP*AGIFVE
Trigger: CTCCACAAAGATACCAGCCAAGGGGACACCATTGTA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp TGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGTTAAGTCCCCCAGACACAGGAAGGAAGACTaGGATTTTCCCTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: WYLLSKLQAMSSDVKSPRHRKED*DFPLQK
Trigger: TTTTTGCAAGGGAAAATCCAAGTCTTCCTTCCTGTG...TCTGGGGGACTTAACATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGTGTTCGTTGCATGTTaGGTGGTCTCAGAACTCGAG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGVFVAC*VVSELE
Trigger: CTCGAGTTCTGAGACCACCAAACATGCAACGAACAC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCATAAACTGTGTTCGTaGCATGTTTGGTGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFHKLCS*HVWWSQ
Trigger: CTGAGACCACCAAACATGCAACGAACACAGTTTATG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACATAAACTGTGTTCGTaGCATGTTTGGTGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSHKLCS*HVWWSQ
Trigger: CTGAGACCACCAAACATGCAACGAACACAGTTTATG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAGGTCATCATCTGGTTaGGTTTTAGAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYRSSSG*VLEMGV
Trigger: CACTCCCATCTCTAAAACCAAACCAGATGATGACCT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAAGGTCATCATCTGGTTaGGTTTTAGAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKRSSSG*VLEMGV
Trigger: CACTCCCATCTCTAAAACCAAACCAGATGATGACCT...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATCTAAGGCCGCTGTCTaGGCCTTACTAGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSKAAV*ALLERS
Trigger: TGACCTTTCTAGTAAGGCCAAGACAGCGGCCTTAGA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGAGAAGCAAGTTGACTaGTGCCCTCTCTCCTATATT +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYEKQVD*CPLSYI
Trigger: AATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGATTGGCATCCTGCTTaGAATATAGCACTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKDWHPA*NIALGS
Trigger: ACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTACCACTCCTGCCCCATaGCTGGGGTTTGGAACTTTC +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGTTPAP*LGFGTF
Trigger: GAAAGTTCCAAACCCCAGCAATGGGGCAGGAGTGGT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGTGGGTGCTGAGGGTTaGTTTCTAAGAACCACTCCT +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGVGAEG*FLRTTP
Trigger: AGGAGTGGTTCTTAGAAACAAACCCTCAGCACCCAC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGTTTATCATCACTGCTaGGCTCAGTCTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFVYHHC*AQSAKQ
Trigger: CTGTTTTGCAGACTGAGCCAAGCAGTGATGATAAAC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CATAAACTGTGTTCGTTGCATGTTTGGTGGTCTCAGAACTCGAGAGTGCTATCAGTTTATCATCACTGCTaGGCTCAGTCTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: HKLCSLHVWWSQNSRVLSVYHHC*AQSAKQ
Trigger: CTGTTTTGCAGACTGAGCCAAGCAGTGATGATAAAC...TGATAGCACTCTCGAGTTCTGAGACCACCAAACATGCAACGAACACAGTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp TTTCCCTTGCAAAAACCATGCTTGATGGGCATTTTTAGGCCCAGGCTAGGCAAGAGTACTAAAATAGAGTaGCTTGGTTCCCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: FPLQKPCLMGIFRPRLGKSTKIE*LGSLKE
Trigger: TTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACT...CTTGCCTAGCCTGGGCCTAAAAATGCCCATCAAGCATGGTTTTTGCAAGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTTCAGACCCTGGAGTaGTCTGTTCTTTCCATAGAT +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLQTLE*SVLSID
Trigger: ATCTATGGAAAGAACAGACAACTCCAGGGTCTGAAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS GCA 90 bp CCACTTTCCATAGATTTCATTGATGGTTATGTGTACAAATATGGATaGTTCTGTCAGTCCTTCCAAATAGACATGCCGGTAGCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PLSIDFIDGYVYKYG*FCQSFQIDMPVARH
Trigger: GTGCCTGGCTACCGGCATGTCTATTTGGAAGGACTGACAGAAGCATCCATATTTGTACACATAACCATCAATGAAATCTATGGAAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340059.11
ENST00000447496.6
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGGCTTCCTGAAACATTaGTCTGACTTTTCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGGFLKH*SDFSSG
Trigger: CCCCGAAGAAAAGTCAGACAAATGTTTCAGGAAGCC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTCAAACTTTGAGGGCTaGGAAGCTGCTTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGSNFEG*EAACTP
Trigger: GGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGTTTGA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTATGTTTTCCAAAGTaGGTCATGAGGGATCGTCCA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLCFPK*VMRDRP
Trigger: TGGACGATCCCTCATGACCAACTTTGGAAAACATAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACAATTGCCATTTGCCTaGAATTTGGCTCGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSQLPFA*NLARFN
Trigger: GTTAAACCGAGCCAAATTCAAGGCAAATGGCAATTG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTCAATTGCCATTTGCCTaGAATTTGGCTCGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFQLPFA*NLARFN
Trigger: GTTAAACCGAGCCAAATTCAAGGCAAATGGCAATTG...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCATCACCAGAGAAAGGGTaGAAAGTACCTTTGCACATT +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSPEKG*KVPLHI
Trigger: AATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTGA...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTATCTCCACCATTTCTaGGAAGCCCATTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYYLHHF*EAHFAL
Trigger: AAGAGCAAAATGGGCTTCCAAGAAATGGTGGAGATA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGAGCCAAATGCTGCTTaGGGGAGAGAGACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVEPNAA*GRETCW
Trigger: CCAGCAAGTCTCTCTCCCCAAAGCAGCATTTGGCTC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCACACCATGCAGATCTaGTGTGGGGTTAACTACAGG +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGHTMQI*CGVNYR
Trigger: CCTGTAGTTAACCCCACACAAGATCTGCATGGTGTG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACACTCTCCTGCAGAATaGCAGTTGAATGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGHSPAE*QLNVGQ
Trigger: CTGACCTACATTCAACTGCAATTCTGCAGGAGAGTG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGACTTGGATTTTCCCTaGCAAAAACCATGCTTGATG +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYDLDFP*QKPCLM
Trigger: CATCAAGCATGGTTTTTGCAAGGGAAAATCCAAGTC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAGACTTGGATTTTCCCTaGCAAAAACCATGCTTGATG +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSDLDFP*QKPCLM
Trigger: CATCAAGCATGGTTTTTGCAAGGGAAAATCCAAGTC...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTGACTTGGATTTTCCCTaGCAAAAACCATGCTTGATG +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFDLDFP*QKPCLM
Trigger: CATCAAGCATGGTTTTTGCAAGGGAAAATCCAAGTC...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACACAGGAAGGAAGACTaGGATTTTCCCTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSHRKED*DFPLQK
Trigger: TTTTTGCAAGGGAAAATCCAAGTCTTCCTTCCTGTG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCTGCTCTCCCCAGAATaGAAACAGAGAGTGGGATCA +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLLSPE*KQRVGS
Trigger: TGATCCCACTCTCTGTTTCAATTCTGGGGAGAGCAG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAAGTTTCTCAAACCTCTTaGAAAGTGTTCTACCACACC +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKVSQTS*KVFYHT
Trigger: GGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAAC...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATGTTTCTCAAACCTCTTaGAAAGTGTTCTACCACACC +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYVSQTS*KVFYHT
Trigger: GGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAAC...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATCTTGAGCACTAGATaGCTGGGGCACACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGILSTR*LGHTGL
Trigger: CAGACCTGTGTGCCCCAGCAATCTAGTGCTCAAGAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATCCCAGACTTTTGGATTaGCAAGGACTAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDPRLLD*QGLGSF
Trigger: GAAACTGCCTAGTCCTTGCAAATCCAAAAGTCTGGG...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCCAGACTTTTGGATTaGCAAGGACTAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPRLLD*QGLGSF
Trigger: GAAACTGCCTAGTCCTTGCAAATCCAAAAGTCTGGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTACTTGCTCTCAAAATaGCAGGCAATGTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYYLLSK*QAMSSD
Trigger: ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAATACTTGCTCTCAAAATaGCAGGCAATGTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKYLLSK*QAMSSD
Trigger: ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTA...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCACTAATACACTGGTACTaGCTCTCAAAATTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSLIHWY*LSKLQA
Trigger: TGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAG...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCCCCATTGCTGGGGTTaGGAACTTTCTGCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGPHCWG*ELSACW
Trigger: CCAACAAGCAGAAAGTTCCAAACCCCAGCAATGGGG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATAGTACAACAGGTAGTTaGGCAACTCGCTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSTTGS*ATRFLL
Trigger: TAACAAGAAGCGAGTTGCCAAACTACCTGTTGTACT...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAAGTTCCAGTAACTCATaGTCAGAAGATTTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSSSSNS*SEDFWH
Trigger: GTGCCAGAAATCTTCTGACAATGAGTTACTGGAACT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS TCA 90 bp GTGCATTTAAGCCTTCATGCGTGGCCTTCAGTAGTGCCCGCACTGTaGAACTATCAGGATCTTCTTTATCTCGAATTTGAGATTCTTTTA +
Preference number: 5 (lower is better)
Translates to: VHLSLHAWPSVVPAL*NYQDLLYLEFEILL
Trigger: TAAAAGAATCTCAAATTCGAGATAAAGAAGATCCTGATAGTTTCACAGTGCGGGCACTACTGAAGGCCACGCATGAAGGCTTAAATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 90 bp TCTATCTCCAATGGATCGCTTCCGTACATAATGGGAATTGTTTTCTaGAGAACTGTGCCTAGGATTCTTATTGAACAGTCCCTTCAGACC +
Preference number: 5 (lower is better)
Translates to: SISNGSLPYIMGIVF*RTVPRILIEQSLQT
Trigger: GGTCTGAAGGGACTGTTCAATAAGAATCCTAGGCACAGTTCTTCAGAAAACAATTCCCATTATGTACGGAAGCGATCCATTGGAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 90 bp GTTCTTTCCATAGATTTCATTGATGGTTATGTGTACAAATATGGATaGTTCTGTCAGTCCTTCCAAATAGACATGCCGGTAGCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: VLSIDFIDGYVYKYG*FCQSFQIDMPVARH
Trigger: GTGCCTGGCTACCGGCATGTCTATTTGGAAGGACTGACAGAAGCATCCATATTTGTACACATAACCATCAATGAAATCTATGGAAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334686.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTGGGTCCTCTGCCTTTaGGCAAGGGAGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVWVLCL*ARESSS
Trigger: TGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCCA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGGCTTCCTGAAACATTaGTCTGACTTTTCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGGFLKH*SDFSSG
Trigger: CCCCGAAGAAAAGTCAGACAAATGTTTCAGGAAGCC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTCACAAAGGCATGCTaGTTGATGGTCTCCACAACA +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGFTKAC*LMVSTT
Trigger: TGTTGTGGAGACCATCAACAAGCATGCCTTTGTGAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGATGACAGGTCCAGTTaGTCTCCGAATATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGDDRSS*SPNIPF
Trigger: GAAAGGAATATTCGGAGACAAACTGGACCTGTCATC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTCAAACTTTGAGGGCTaGGAAGCTGCTTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVSNFEG*EAACTP
Trigger: GGGAGTGCAAGCAGCTTCCAAGCCCTCAAAGTTTGA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGAGCGGCCACGGAGTTaGTGTACACAACCAAATCAG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVERPRS*CTQPNQ
Trigger: CTGATTTGGTTGTGTACACAAACTCCGTGGCCGCTC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTGATGGAAGTCCCTCATTCTGAAAGCCGTTGTTCGCAGTCTGTAATTCAATCAATCTACCACACGGGTTaGATCTTTACAACAATCTAC +
Preference number: 5 (lower is better)
Translates to: LMEVPHSESRCSQSVIQSIYHTG*IFTTIY
Trigger: GTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGAT...TGATTGAATTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAACAGGGTTAAATCCATaGTCATCTACCACACGGGTT +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGTGLNP*SSTTRV
Trigger: AACCCGTGTGGTAGATGACAATGGATTTAACCCTGT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCGCCATCTTGATCTCTaGTGGCCTCGGACACAGAAT +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVRHLDL*WPRTQN
Trigger: ATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCACACCATGCAGATCTaGTGTGGGGTTAACTACAGG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGHTMQI*CGVNYR
Trigger: CCTGTAGTTAACCCCACACAAGATCTGCATGGTGTG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGTGTTCGTTGCATGTTaGGTGGTCTCAGAACTCGAG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGVFVAC*VVSELE
Trigger: CTCGAGTTCTGAGACCACCAAACATGCAACGAACAC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACATAAACTGTGTTCGTaGCATGTTTGGTGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGHKLCS*HVWWSQ
Trigger: CTGAGACCACCAAACATGCAACGAACACAGTTTATG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGATGTGCCAACTGCTaGGGTACAGGGACATGCATA +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGRCANC*GTGTCI
Trigger: TATGCATGTCCCTGTACCCAAGCAGTTGGCACATCT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATGATTGGCATCCTGCTTaGAATATAGCACTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDDWHPA*NIALGS
Trigger: ACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATC...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAGTTTATCATCACTGCTaGGCTCAGTCTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGVYHHC*AQSAKQ
Trigger: CTGTTTTGCAGACTGAGCCAAGCAGTGATGATAAAC...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCATCCCTTTGTCGTTaGCAAAGTCTCTTAATCAAC +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYSSLCR*QSLLIN
Trigger: GTTGATTAAGAGACTTTGCAAACGACAAAGGGATGA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTTGGCAACTCGCTTCTaGTTACATACAAAGCCATTA +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYLATRF*LHTKPL
Trigger: TAATGGCTTTGTATGTAACAAGAAGCGAGTTGCCAA...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTTTGGCAACTCGCTTCTaGTTACATACAAAGCCATTA +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFLATRF*LHTKPL
Trigger: TAATGGCTTTGTATGTAACAAGAAGCGAGTTGCCAA...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAGCATCAAAACCAAATaGCCCTCCTCAGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGSIKTK*PSSALS
Trigger: ACTCAAAGCTGAGGAGGGCAATTTGGTTTTGATGCT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS TCA 90 bp AGTTTTCTTATGTTTTCCAAAGTTGGTCATGAGGGATCGTCCATGTaGTTTCTTTCCACTTTCCTTTACATCTGGACTCTGCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: SFLMFSKVGHEGSSM*FLSTFLYIWTLLQV
Trigger: CACCTGAAGCAGAGTCCAGATGTAAAGGAAAGTGGAAAGAAATCACATGGACGATCCCTCATGACCAACTTTGGAAAACATAAGAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGGCTTCCTGAAACATTaGTCTGACTTTTCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGGFLKH*SDFSSG
Trigger: CCCCGAAGAAAAGTCAGACAAATGTTTCAGGAAGCC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATTTTGTCCTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATCACATTATTCATCTTTaGCTCCACCTTCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: ILSLCTKDSLLPHTLTAYHIIHL*LHLQKL
Trigger: CAGTTTTTGAAGGTGGAGCAAAAGATGAATAATGTG...ATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAGGACAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTTATGTACAAAAGACAGCCTTCTTCCTCACACCCTCACGGCCTATTCCAAAAACACATTATTCATCTTTaGCTCCACCTTCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: LMYKRQPSSSHPHGLFQKHIIHL*LHLQKL
Trigger: CAGTTTTTGAAGGTGGAGCAAAAGATGAATAATGTG...TTTTTGGAATAGGCCGTGAGGGTGTGAGGAAGAAGGCTGTCTTTTGTACATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATTATGTTTTCCAAAGTaGGTCATGAGGGATCGTCCA +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGLCFPK*VMRDRP
Trigger: TGGACGATCCCTCATGACCAACTTTGGAAAACATAA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CTCTTACTAATACACTGGTACTTGCTCTCAAAATTGCAGGCAATGTCCTCTGATCAATTGCCATTTGCCTaGAATTTGGCTCGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: LLLIHWYLLSKLQAMSSDQLPFA*NLARFN
Trigger: GTTAAACCGAGCCAAATTCAAGGCAAATGGCAATTG...ATCAGAGGACATTGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAGTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGGGTTGAAAGTACCTTaGCACATTTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGGLKVP*HICWGL
Trigger: CAAACCCCAGCAAATGTGCAAAGGTACTTTCAACCC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTACAGGGTTAAATCCATaGTCATCTACCACACGGGTT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGTGLNP*SSTTRV
Trigger: AACCCGTGTGGTAGATGACAATGGATTTAACCCTGT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGATATCTCCACCATTTCTaGGAAGCCCATTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGYLHHF*EAHFAL
Trigger: AAGAGCAAAATGGGCTTCCAAGAAATGGTGGAGATA...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTACAATGGTGTCCCCTaGGCTGGTATCTTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVYNGVP*AGIFVE
Trigger: CTCCACAAAGATACCAGCCAAGGGGACACCATTGTA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAATTGCTTGTGGCATTaGATGTGGTTCTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVNCLWH*MWFSHP
Trigger: GGGGTGGGAGAACCACATCAAATGCCACAAGCAATT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGTGTTCGTTGCATGTTaGGTGGTCTCAGAACTCGAG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVVFVAC*VVSELE
Trigger: CTCGAGTTCTGAGACCACCAAACATGCAACGAACAC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTCTAAGGCCGCTGTCTaGGCCTTACTAGAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVSKAAV*ALLERS
Trigger: TGACCTTTCTAGTAAGGCCAAGACAGCGGCCTTAGA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGAGAAGCAAGTTGACTaGTGCCCTCTCTCCTATATT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGEKQVD*CPLSYI
Trigger: AATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGGACATCTTGGTGAAACACACACACATTATAACCCGAGCTGCTGAGGAGTTTAGGTCTGGAACATTTTaGCATCTGAATCTGAGAAAT +
Preference number: 5 (lower is better)
Translates to: KDILVKHTHIITRAAEEFRSGTF*HLNLRN
Trigger: ATTTCTCAGATTCAGATGCAAAAATGTTCCAGACCT...AAACTCCTCAGCAGCTCGGGTTATAATGTGTGTGTGTTTCACCAAGATGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAGATGTGCCAACTGCTaGGGTACAGGGACATGCATA +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVRCANC*GTGTCI
Trigger: TATGCATGTCCCTGTACCCAAGCAGTTGGCACATCT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTACAGTCACGCCCTTCTaGTCTCTAATGCCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGTVTPF*SLMPVV
Trigger: TACAACTGGCATTAGAGACAAGAAGGGCGTGACTGT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGTGGGTGCTGAGGGTTaGTTTCTAAGAACCACTCCT +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVVGAEG*FLRTTP
Trigger: AGGAGTGGTTCTTAGAAACAAACCCTCAGCACCCAC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCCAGAATTCATCCCTTTGTCGTTaGCAAAGTCTCTTAATCAAC +
Preference number: 5 (lower is better)
Translates to: EKDFLILHQFPQGCSPQNSSLCR*QSLLIN
Trigger: GTTGATTAAGAGACTTTGCAAACGACAAAGGGATGA...ATTCTGGGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS TCA 90 bp CTGACTTTTCTTCGGGGCAGATTAACATTCAGTTTATGCATCAGCTaGTGTATCTCTTCAATATTCAGCAAGCCGTCACCATTCTTATCA +
Preference number: 5 (lower is better)
Translates to: LTFLRGRLTFSLCIS*CISSIFSKPSPFLS
Trigger: TGATAAGAATGGTGACGGCTTGCTGAATATTGAAGAGATACATCAGCTGATGCATAAACTGAATGTTAATCTGCCCCGAAGAAAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGATGACAGGTCCAGTTaGTCTCCGAATATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGDDRSS*SPNIPF
Trigger: GAAAGGAATATTCGGAGACAAACTGGACCTGTCATC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTTATGTTTTCCAAAGTaGGTCATGAGGGATCGTCCA +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGLCFPK*VMRDRP
Trigger: TGGACGATCCCTCATGACCAACTTTGGAAAACATAA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTACCTTTGCACATTaGCTGGGGTTTGAGGACATA +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGSTFAH*LGFEDI
Trigger: TATGTCCTCAAACCCCAGCAAATGTGCAAAGGTACT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTCACCAGAGAAAGGGTaGAAAGTACCTTTGCACATT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSPEKG*KVPLHI
Trigger: AATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTGA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGAAGGTCACAGTTCTTaGTCCAACAAAGTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVEGHSS*SNKVSS
Trigger: GGACGAGACTTTGTTGGACAAAGAACTGTGACCTTC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTTATCTCCACCATTTCTaGGAAGCCCATTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGYLHHF*EAHFAL
Trigger: AAGAGCAAAATGGGCTTCCAAGAAATGGTGGAGATA...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCACTCTCCTGCAGAATaGCAGTTGAATGTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVHSPAE*QLNVGQ
Trigger: CTGACCTACATTCAACTGCAATTCTGCAGGAGAGTG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCACAGGAAGGAAGACTaGGATTTTCCCTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGHRKED*DFPLQK
Trigger: TTTTTGCAAGGGAAAATCCAAGTCTTCCTTCCTGTG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGGTCATCATCTGGTTaGGTTTTAGAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGRSSSG*VLEMGV
Trigger: CACTCCCATCTCTAAAACCAAACCAGATGATGACCT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTCCCAGTCTTCTCCCTaGGTAGGACTTTTTGGTAAC +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVSQSSP*VGLFGN
Trigger: GTTACCAAAAAGTCCTACCAAGGGAGAAGACTGGGA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTGTTTCTCAAACCTCTTaGAAAGTGTTCTACCACACC +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGVSQTS*KVFYHT
Trigger: GGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAAC...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCCCAGACTTTTGGATTaGCAAGGACTAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVPRLLD*QGLGSF
Trigger: GAAACTGCCTAGTCCTTGCAAATCCAAAAGTCTGGG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTATAGCACTTGGCAGTaGTCTTCCTGGTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVYSTWQ*SSWSKD
Trigger: GTCCTTTGACCAGGAAGACAACTGCCAAGTGCTATA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGATTGGCATCCTGCTTaGAATATAGCACTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGDWHPA*NIALGS
Trigger: ACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGAAAGGAATTCATCCCTTaGTCGTTTGCAAAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGKEFIP*SFAKSL
Trigger: AAGAGACTTTGCAAACGACAAAGGGATGAATTCCTT...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGTACAACAGGTAGTTaGGCAACTCGCTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGSTTGS*ATRFLL
Trigger: TAACAAGAAGCGAGTTGCCAAACTACCTGTTGTACT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTTCAGACCCTGGAGTaGTCTGTTCTTTCCATAGAT +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLQTLE*SVLSID
Trigger: ATCTATGGAAAGAACAGACAACTCCAGGGTCTGAAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334686.6
ENST00000460012.7
CDS TCA 90 bp TCTTCCCACACAGGGTTAAATCCATTGTCATCTACCACACGGGTTTaGTCTTTACAACAATCTACTGGCAATCCAATAATTTCAACTTCA +
Preference number: 5 (lower is better)
Translates to: SSHTGLNPLSSTTRV*SLQQSTGNPIISTS
Trigger: TGAAGTTGAAATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGATGACAATGGATTTAACCCTGTGTGGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTTTCACAAAGGCATGCTaGTTGATGGTCTCCACAACA +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVFTKAC*LMVSTT
Trigger: TGTTGTGGAGACCATCAACAAGCATGCCTTTGTGAA...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTTTATGTTTTCCAAAGTaGGTCATGAGGGATCGTCCA +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLCFPK*VMRDRP
Trigger: TGGACGATCCCTCATGACCAACTTTGGAAAACATAA...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp GTTGCTTGGTTCCCTGAAGGAAAAGGGTTTCTTCTAATTATCTGTTCACTTGGACCTCGTGAGTTGCTTTaGATTATAAATCATGAACTG +
Preference number: 5 (lower is better)
Translates to: VAWFPEGKGFLLIICSLGPRELL*IINHEL
Trigger: CAGTTCATGATTTATAATCAAAAGCAACTCACGAGG...TCCAAGTGAACAGATAATTAGAAGAAACCCTTTTCCTTCAGGGAACCAAGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCAATTGCCATTTGCCTaGAATTTGGCTCGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGQLPFA*NLARFN
Trigger: GTTAAACCGAGCCAAATTCAAGGCAAATGGCAATTG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCACAGGAAGGAAGACTaGGATTTTCCCTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGHRKED*DFPLQK
Trigger: TTTTTGCAAGGGAAAATCCAAGTCTTCCTTCCTGTG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAGGTCATCATCTGGTTaGGTTTTAGAGATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVRSSSG*VLEMGV
Trigger: CACTCCCATCTCTAAAACCAAACCAGATGATGACCT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGAGAAGCAAGTTGACTaGTGCCCTCTCTCCTATATT +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVEKQVD*CPLSYI
Trigger: AATATAGGAGAGAGGGCACAAGTCAACTTGCTTCTC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTGTTTCTCAAACCTCTTaGAAAGTGTTCTACCACACC +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGVSQTS*KVFYHT
Trigger: GGTGTGGTAGAACACTTTCAAAGAGGTTTGAGAAAC...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp TTGTTAGAGAAAGATTTTCTGATTCTCCATCAATTTCCACAAGGCTGCTCTCCCAGGTCTGGAACATTTTaGCATCTGAATCTGAGAAAT +
Preference number: 5 (lower is better)
Translates to: LLEKDFLILHQFPQGCSPRSGTF*HLNLRN
Trigger: ATTTCTCAGATTCAGATGCAAAAATGTTCCAGACCT...GGGAGAGCAGCCTTGTGGAAATTGATGGAGAATCAGAAAATCTTTCTCTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447496.6
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTCTAATACACTGGTACTaGCTCTCAAAATTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGLIHWY*LSKLQA
Trigger: TGCCTGCAATTTTGAGAGCAAGTACCAGTGTATTAG...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGATTGGCATCCTGCTTaGAATATAGCACTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVDWHPA*NIALGS
Trigger: ACTGCCAAGTGCTATATTCAAAGCAGGATGCCAATC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTGTTTATCATCACTGCTaGGCTCAGTCTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVVYHHC*AQSAKQ
Trigger: CTGTTTTGCAGACTGAGCCAAGCAGTGATGATAAAC...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAAGGAATTCATCCCTTaGTCGTTTGCAAAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGKEFIP*SFAKSL
Trigger: AAGAGACTTTGCAAACGACAAAGGGATGAATTCCTT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTACAACAGGTAGTTaGGCAACTCGCTTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGSTTGS*ATRFLL
Trigger: TAACAAGAAGCGAGTTGCCAAACTACCTGTTGTACT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCACATTATTCATCTTTaGCTCCACCTTCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGHIIHL*LHLQKL
Trigger: CAGTTTTTGAAGGTGGAGCAAAAGATGAATAATGTG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTCCTCGTGAGTTGCTTTaGATTATAAATCATGAACTG +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGPRELL*IINHEL
Trigger: CAGTTCATGATTTATAATCAAAAGCAACTCACGAGG...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp AAGCCGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTATCTACCACACGGGTTaGATCTTTACAACAATCTAC +
Preference number: 5 (lower is better)
Translates to: KPLFAVCNSIRKFKSTTGIYHTG*IFTTIY
Trigger: GTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGAT...ACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp ATAATGCATGTCAGTACTAAAATAGAGTTGCTTGGTTCCCTGAAGGAAAAGGGTAGGTCTGGAACATTTTaGCATCTGAATCTGAGAAAT +
Preference number: 5 (lower is better)
Translates to: IMHVSTKIELLGSLKEKGRSGTF*HLNLRN
Trigger: ATTTCTCAGATTCAGATGCAAAAATGTTCCAGACCT...ACCCTTTTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACTGACATGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAGTACTAAAATAGAGTaGCTTGGTTCCCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVSTKIE*LGSLKE
Trigger: TTCCTTCAGGGAACCAAGCAACTCTATTTTAGTACT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTCCTCGTGAGTTGCTTTaGATTATAAATCATGAACTG +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVPRELL*IINHEL
Trigger: CAGTTCATGATTTATAATCAAAAGCAACTCACGAGG...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS-3UTR CAA 90 bp CGTTGTTCGCAGTCTGTAATTCAATCAGAAAATTCAAAAGTACAACAGGTAGTTAGGTCTGGAACATTTTaGCATCTGAATCTGAGAAAT +
Preference number: 5 (lower is better)
Translates to: RCSQSVIQSENSKVQQVVRSGTF*HLNLRN
Trigger: ATTTCTCAGATTCAGATGCAAAAATGTTCCAGACCT...AACTACCTGTTGTACTTTTGAATTTTCTGATTGAATTACAGACTGCGAACAACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
CDS CAA 72 bp TTGAGGCCTGTGATCCAGGTGCGGGCCTCCTCGGGGTaGGAGGTGATGAGGTCCAGGGACTCCATGTGGTTG +
Preference number: 6 (lower is better)
Translates to: LRPVIQVRASSG*EVMRSRDSMWL
Trigger: CAACCACATGGAGTCCCTGGACCTCATCACCTCCAACCCCGAGGAGGCCCGCACCTGGATCACAGGCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp AGGGAGTCTTCATCACTGATGCCAGCCATCAGGTACTaGAGGCCTGTGATCCAGGTGCGGGCCTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: RESSSLMPAIRY*RPVIQVRASSG
Trigger: CCCCGAGGAGGCCCGCACCTGGATCACAGGCCTCAAGTACCTGATGGCTGGCATCAGTGATGAAGACTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp AGCCAGATAAGCACGCTGGAAGCATCTGCTCGGGGCTaGCGCTATTGTGGGAATGCAGGCGCTGTGGCTACT +
Preference number: 6 (lower is better)
Translates to: SQISTLEASARG*RYCGNAGAVAT
Trigger: AGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCCAGCGTGCTTATCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CCA 72 bp CGGAGTCCGTGGCACAAGGAGCCACCTCCGAAGTGCTaGGGTGATGAGTTATTGGCCCCTGTGACTCCAACT +
Preference number: 6 (lower is better)
Translates to: RSPWHKEPPPKC*GDELLAPVTPT
Trigger: AGTTGGAGTCACAGGGGCCAATAACTCATCACCCCAGCACTTCGGAGGTGGCTCCTTGTGCCACGGACTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS CCA 72 bp CACGCTGGAAGCATCTGCTCGGGGCTGCCGCTATTGTaGGAATGCAGGCGCTGTGGCTACTTTGGGTATGAG +
Preference number: 6 (lower is better)
Translates to: HAGSICSGLPLL*ECRRCGYFGYE
Trigger: CTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCCAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CAA 90 bp CTTTTGGCAAGGGAGTCTTCATCACTGATGCCAGCCATCAGGTACTaGAGGCCTGTGATCCAGGTGCGGGCCTCCTCGGGGTTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: LLARESSSLMPAIRY*RPVIQVRASSGLEV
Trigger: CACCTCCAACCCCGAGGAGGCCCGCACCTGGATCACAGGCCTCAAGTACCTGATGGCTGGCATCAGTGATGAAGACTCCCTTGCCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp GCTCGGGGCTGCCGCTATTGTGGGAATGCAGGCGCTGTGGCTACTTaGGGTATGAGACATGCATGCTTCGTGCAGCGCGTTAAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: ARGCRYCGNAGAVAT*GMRHACFVQRVKAL
Trigger: GAGGGCTTTAACGCGCTGCACGAAGCATGCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CAA 90 bp CAGCCAGATAAGCACGCTGGAAGCATCTGCTCGGGGCTGCCGCTATaGTGGGAATGCAGGCGCTGTGGCTACTTTGGGTATGAGACATGC +
Preference number: 6 (lower is better)
Translates to: QPDKHAGSICSGLPL*WECRRCGYFGYETC
Trigger: GCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCCAGCGTGCTTATCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS GCA 72 bp GGAAGCATCTGCTCGGGGCTGCCGCTATTGTGGGAATaGAGGCGCTGTGGCTACTTTGGGTATGAGACATGC +
Preference number: 6 (lower is better)
Translates to: GSICSGLPLLWE*RRCGYFGYETC
Trigger: GCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CAA 72 bp AAGCACGCTGGAAGCATCTGCTCGGGGCTGCCGCTATaGTGGGAATGCAGGCGCTGTGGCTACTTTGGGTAT +
Preference number: 6 (lower is better)
Translates to: KHAGSICSGLPL*WECRRCGYFGY
Trigger: ATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCAGCCCCGAGCAGATGCTTCCAGCGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS TCA 72 bp CTAGCTGGCAGCCTGCGTTCCAGTAGGGGAGAGGGTTaGAGTTACTGGAATCAATGCGGTAGGCAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: LAGSLRSSRGEG*SYWNQCGRQRG
Trigger: ACCCCTCTGCCTACCGCATTGATTCCAGTAACTTCAACCCTCTCCCCTACTGGAACGCAGGCTGCCAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS GCA 72 bp CAGAAGGTTTCTGTCAACAGGCATAGAGACAGGGCGTaGTTGCAAACTGCGTGTGGTCCTCCTCAGCACGCC +
Preference number: 6 (lower is better)
Translates to: QKVSVNRHRDRA*LQTACGPPQHA
Trigger: GGCGTGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATGCCTGTTGACAGAAACCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp TTCGGCGACCCAATCTGTACAGCTGGCCACCCTCCTTaGCAGTACTCTGCTGTGTGTCTTCCTCATCATCAG +
Preference number: 6 (lower is better)
Translates to: FGDPICTAGHPP*QYSAVCLPHHQ
Trigger: CTGATGATGAGGAAGACACACAGCAGAGTACTGGCAAGGAGGGTGGCCAGCTGTACAGATTGGGTCGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS GCA 72 bp AGGTTTCTGTCAACAGGCATAGAGACAGGGCGTGCTTaGAAACTGCGTGTGGTCCTCCTCAGCACGCCATCT +
Preference number: 6 (lower is better)
Translates to: RFLSTGIETGRA*KLRVVLLSTPS
Trigger: AGATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATGCCTGTTGACAGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp AAGGTTTCTGTCAACAGGCATAGAGACAGGGCGTGCTaGCAAACTGCGTGTGGTCCTCCTCAGCACGCCATC +
Preference number: 6 (lower is better)
Translates to: KVSVNRHRDRAC*QTACGPPQHAI
Trigger: GATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATGCCTGTTGACAGAAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp TGCCGCTATTGTGGGAATGCAGGCGCTGTGGCTACTTaGGGTATGAGACATGCATGCTTCGTGCAGCGCGTT +
Preference number: 6 (lower is better)
Translates to: CRYCGNAGAVAT*GMRHACFVQRV
Trigger: AACGCGCTGCACGAAGCATGCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAATAGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CAA 90 bp AGGGCGTGCTTGCAAACTGCGTGTGGTCCTCCTCAGCACGCCATCTaGATCTCTTGTGGCCTCGGACACAGAATCCTTTATCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: RACLQTACGPPQHAI*ISCGLGHRILYLHH
Trigger: ATGGTGGAGATAAAGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp AGCTCCCAGAAGGTTTCTGTCAACAGGCATAGAGACAGGGCGTGCTaGCAAACTGCGTGTGGTCCTCCTCAGCACGCCATCTTGATCTCT +
Preference number: 6 (lower is better)
Translates to: SSQKVSVNRHRDRAC*QTACGPPQHAILIS
Trigger: AGAGATCAAGATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAGCACGCCCTGTCTCTATGCCTGTTGACAGAAACCTTCTGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp AGAGGCGGACAAGCCCTTTGGTTCCACGTTTCAGCTTaGTCATCTGTGTCCCGGACTGCATCACACTCATGC +
Preference number: 6 (lower is better)
Translates to: RGGQALWFHVSA*SSVSRTASHSC
Trigger: GCATGAGTGTGATGCAGTCCGGGACACAGATGATCAAGCTGAAACGTGGAACCAAAGGGCTTGTCCGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp ATTGTGGGAATGCAGGCGCTGTGGCTACTTTGGGTATaGGACATGCATGCTTCGTGCAGCGCGTTAAAGCCC +
Preference number: 6 (lower is better)
Translates to: IVGMQALWLLWV*DMHASCSALKP
Trigger: GGGCTTTAACGCGCTGCACGAAGCATGCATGTCTCATACCCAAAGTAGCCACAGCGCCTGCATTCCCACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS GCA 72 bp GCAGGCGCTGTGGCTACTTTGGGTATGAGACATGCATaGTTCGTGCAGCGCGTTAAAGCCCTCAAGGCATTA +
Preference number: 6 (lower is better)
Translates to: AGAVATLGMRHA*FVQRVKALKAL
Trigger: TAATGCCTTGAGGGCTTTAACGCGCTGCACGAAGCATGCATGTCTCATACCCAAAGTAGCCACAGCGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CAA 72 bp GTCTGCTTCACCCATTGGTCATGGGTCCTCTGCCTTTaGGCAAGGGAGTCTTCATCACTGATGCCAGCCATC +
Preference number: 6 (lower is better)
Translates to: VCFTHWSWVLCL*ARESSSLMPAI
Trigger: GATGGCTGGCATCAGTGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCCATGACCAATGGGTGAAGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp AACTTCCACACAGCGACAGCCCTCTTGCAGCACCCGTaGATACATATCCACTTTGGACTGAGAAAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: NFHTATALLQHP*IHIHFGLRKEL
Trigger: CAGCTCCTTTCTCAGTCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAGGGCTGTCGCTGTGTGGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 72 bp AGCCCTCTTGCAGCACCCGTGCATACATATCCACTTTaGACTGAGAAAGGAGCTGGTCTCCAGTCAGGTATG +
Preference number: 6 (lower is better)
Translates to: SPLAAPVHTYPL*TEKGAGLQSGM
Trigger: CATACCTGACTGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp AAGAGGCGGACAAGCCCTTTGGTTCCACGTTTCAGCTaGATCATCTGTGTCCCGGACTGCATCACACTCATG +
Preference number: 6 (lower is better)
Translates to: KRRTSPLVPRFS*IICVPDCITLM
Trigger: CATGAGTGTGATGCAGTCCGGGACACAGATGATCAAGCTGAAACGTGGAACCAAAGGGCTTGTCCGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp ATCCCAACAGTCAACTTCCACACAGCGACAGCCCTCTaGCAGCACCCGTGCATACATATCCACTTTGGACTG +
Preference number: 6 (lower is better)
Translates to: IPTVNFHTATAL*QHPCIHIHFGL
Trigger: CAGTCCAAAGTGGATATGTATGCACGGGTGCTGCAAGAGGGCTGTCGCTGTGTGGAAGTTGACTGTTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp TCCTCAAAGGTCTGCTTCACCCATTGGTCATGGGTCCTCTGCCTTTaGGCAAGGGAGTCTTCATCACTGATGCCAGCCATCAGGTACTTG +
Preference number: 6 (lower is better)
Translates to: SSKVCFTHWSWVLCL*ARESSSLMPAIRYL
Trigger: CAAGTACCTGATGGCTGGCATCAGTGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCCATGACCAATGGGTGAAGCAGACCTTTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp TTCCTGTGGTTCCGTCATCCACAATGTCCTGAGCGGCCACGGAGTTaGTGTACACAACCAAATCAGAGAGTTCTCGGCAGAGCTTCATGG +
Preference number: 6 (lower is better)
Translates to: FLWFRHPQCPERPRS*CTQPNQRVLGRASW
Trigger: CCATGAAGCTCTGCCGAGAACTCTCTGATTTGGTTGTGTACACAAACTCCGTGGCCGCTCAGGACATTGTGGATGACGGAACCACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS CAA 90 bp TCGGACACAGAATCCTTTATCTCCACCATTTCTTGGAAGCCCATTTaGCTCTTTTTCCTGCCTTTGGCTGGGGCGCTAGCTGTGCGTCGC +
Preference number: 6 (lower is better)
Translates to: SDTESFISTISWKPI*LFFLPLAGALAVRR
Trigger: GCGACGCACAGCTAGCGCCCCAGCCAAAGGCAGGAAAAAGAGCAAAATGGGCTTCCAAGAAATGGTGGAGATAAAGGATTCTGTGTCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp CTTGCAAACTGCGTGTGGTCCTCCTCAGCACGCCATCTTGATCTCTaGTGGCCTCGGACACAGAATCCTTTATCTCCACCATTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: LANCVWSSSARHLDL*WPRTQNPLSPPFLG
Trigger: TCCAAGAAATGGTGGAGATAAAGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp TCAAAGGTCTGCTTCACCCATTGGTCATGGGTCCTCTaGCTTTTGGCAAGGGAGTCTTCATCACTGATGCCA +
Preference number: 6 (lower is better)
Translates to: SKVCFTHWSWVL*LLARESSSLMP
Trigger: TGGCATCAGTGATGAAGACTCCCTTGCCAAAAGGCAGAGGACCCATGACCAATGGGTGAAGCAGACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp TCTGGACTCTGCTTCAGGTGTGCATTTAAGCCTTCATaGGTGGCCTTCAGTAGTGCCCGCACTGTGAAACTA +
Preference number: 6 (lower is better)
Translates to: SGLCFRCAFKPS*VAFSSARTVKL
Trigger: TAGTTTCACAGTGCGGGCACTACTGAAGGCCACGCATGAAGGCTTAAATGCACACCTGAAGCAGAGTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp CTGGGGAAAGGCACTTTGCACATTTCTGCTTTAGCCTaGTCAGTCGGCCTGCAAAAGCTAGAGTCTAGAGAG +
Preference number: 6 (lower is better)
Translates to: LGKGTLHISALA*SVGLQKLESRE
Trigger: CTCTCTAGACTCTAGCTTTTGCAGGCCGACTGAGCAGGCTAAAGCAGAAATGTGCAAAGTGCCTTTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CCA 72 bp GAGAGTGTAACCATGATGTACTACTGGCTCTCCATCTaGGCCATCCCAACAGTCAACTTCCACACAGCGACA +
Preference number: 6 (lower is better)
Translates to: ESVTMMYYWLSI*AIPTVNFHTAT
Trigger: TGTCGCTGTGTGGAAGTTGACTGTTGGGATGGCCCAGATGGAGAGCCAGTAGTACATCATGGTTACACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 72 bp ACACAACCAAATCAGAGAGTTCTCGGCAGAGCTTCATaGTTTTCCTTCGGCGACCCAATCTGTACAGCTGGC +
Preference number: 6 (lower is better)
Translates to: TQPNQRVLGRAS*FSFGDPICTAG
Trigger: GCCAGCTGTACAGATTGGGTCGCCGAAGGAAAACCATGAAGCTCTGCCGAGAACTCTCTGATTTGGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS CCA 72 bp GTGTGGTCCTCCTCAGCACGCCATCTTGATCTCTTGTaGCCTCGGACACAGAATCCTTTATCTCCACCATTT +
Preference number: 6 (lower is better)
Translates to: VWSSSARHLDLL*PRTQNPLSPPF
Trigger: AAATGGTGGAGATAAAGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGGAGGACCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp TTCCGTCATCCACAATGTCCTGAGCGGCCACGGAGTTaGTGTACACAACCAAATCAGAGAGTTCTCGGCAGA +
Preference number: 6 (lower is better)
Translates to: FRHPQCPERPRS*CTQPNQRVLGR
Trigger: TCTGCCGAGAACTCTCTGATTTGGTTGTGTACACAAACTCCGTGGCCGCTCAGGACATTGTGGATGACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS CAA 72 bp TTGCAAACTGCGTGTGGTCCTCCTCAGCACGCCATCTaGATCTCTTGTGGCCTCGGACACAGAATCCTTTAT +
Preference number: 6 (lower is better)
Translates to: LQTACGPPQHAI*ISCGLGHRILY
Trigger: ATAAAGGATTCTGTGTCCGAGGCCACAAGAGATCAAGATGGCGTGCTGAGGAGGACCACACGCAGTTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp GGGTCAATGATCTCGCCTCGATCTCCAAACATGGAGTCTGGAGGTTaGGGGAGTTGCTGTCCACTGATAACTTTCAGGATGAGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: GSMISPRSPNMESGG*GSCCPLITFRMSCF
Trigger: AAAGCAGCTCATCCTGAAAGTTATCAGTGGACAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGAGATCGAGGCGAGATCATTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS TCA 72 bp CCAAATAGACATGCCGGTAGCCAGGCACTAAGCTGCTaGAGGTCACAGTTCTTTGTCCAACAAAGTCTCGTC +
Preference number: 6 (lower is better)
Translates to: PNRHAGSQALSC*RSQFFVQQSLV
Trigger: GACGAGACTTTGTTGGACAAAGAACTGTGACCTTCAGCAGCTTAGTGCCTGGCTACCGGCATGTCTATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp TCTTGCAGCACCCGTGCATACATATCCACTTTGGACTaGGAAAGGAGCTGGTCTCCAGTCAGGTATGTATTG +
Preference number: 6 (lower is better)
Translates to: SCSTRAYISTLD*ERSWSPVRYVL
Trigger: CAATACATACCTGACTGGAGACCAGCTCCTTTCTCAGTCCAAAGTGGATATGTATGCACGGGTGCTGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp GCTTGGAAGCTGCTTGCACTCCCCTGTATCAACAGATaGCAGGTCCAGTTTGTCTCCGAATATTCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: AWKLLALPCINR*QVQFVSEYSFQ
Trigger: CTGAAAGGAATATTCGGAGACAAACTGGACCTGTCATCTGTTGATACAGGGGAGTGCAAGCAGCTTCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 72 bp GTCAATGATCTCGCCTCGATCTCCAAACATGGAGTCTaGAGGTTTGGGGAGTTGCTGTCCACTGATAACTTT +
Preference number: 6 (lower is better)
Translates to: VNDLASISKHGV*RFGELLSTDNF
Trigger: AAAGTTATCAGTGGACAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGAGATCGAGGCGAGATCATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS CCA 72 bp AGGTCACAGTTCTTTGTCCAACAAAGTCTCGTCCAATaGGATCGTGATCCCACACAAGGAACCGAACCAAAG +
Preference number: 6 (lower is better)
Translates to: RSQFFVQQSLVQ*DRDPTQGTEPK
Trigger: CTTTGGTTCGGTTCCTTGTGTGGGATCACGATCCCATTGGACGAGACTTTGTTGGACAAAGAACTGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp TCGATCTCCAAACATGGAGTCTGGAGGTTTGGGGAGTaGCTGTCCACTGATAACTTTCAGGATGAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SISKHGVWRFGE*LSTDNFQDELL
Trigger: AAGCAGCTCATCCTGAAAGTTATCAGTGGACAGCAACTCCCCAAACCTCCAGACTCCATGTTTGGAGATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS CAA 72 bp GAATCCTTTATCTCCACCATTTCTTGGAAGCCCATTTaGCTCTTTTTCCTGCCTTTGGCTGGGGCGCTAGCT +
Preference number: 6 (lower is better)
Translates to: ESFISTISWKPI*LFFLPLAGALA
Trigger: AGCTAGCGCCCCAGCCAAAGGCAGGAAAAAGAGCAAAATGGGCTTCCAAGAAATGGTGGAGATAAAGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp GGCCTCGGACACAGAATCCTTTATCTCCACCATTTCTaGGAAGCCCATTTTGCTCTTTTTCCTGCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: GLGHRILYLHHF*EAHFALFPAFG
Trigger: GCCAAAGGCAGGAAAAAGAGCAAAATGGGCTTCCAAGAAATGGTGGAGATAAAGGATTCTGTGTCCGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp GTGAGAGGAAGCAATGTAGTAGTTGCAGAGGGGCTGATCCATGTCTaGGTACACTTCATGGTGCAATGGGTTAAATATGTCACAGGCAGG +
Preference number: 6 (lower is better)
Translates to: VRGSNVVVAEGLIHV*VHFMVQWVKYVTGR
Trigger: CCTGCCTGTGACATATTTAACCCATTGCACCATGAAGTGTACCAAGACATGGATCAGCCCCTCTGCAACTACTACATTGCTTCCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp AGTTGCTGTCCACTGATAACTTTCAGGATGAGCTGCTTTTTGGGGTaGGCAGGAAGAGGGTCACCAGAGAAAGGGTTGAAAGTACCTTTG +
Preference number: 6 (lower is better)
Translates to: SCCPLITFRMSCFLG*AGRGSPEKGLKVPL
Trigger: CAAAGGTACTTTCAACCCTTTCTCTGGTGACCCTCTTCCTGCCAACCCCAAAAAGCAGCTCATCCTGAAAGTTATCAGTGGACAGCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS TCA 72 bp AGCCTTCATGCGTGGCCTTCAGTAGTGCCCGCACTGTaGAACTATCAGGATCTTCTTTATCTCGAATTTGAG +
Preference number: 6 (lower is better)
Translates to: SLHAWPSVVPAL*NYQDLLYLEFE
Trigger: CTCAAATTCGAGATAAAGAAGATCCTGATAGTTTCACAGTGCGGGCACTACTGAAGGCCACGCATGAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 72 bp GGGCTGATCCATGTCTTGGTACACTTCATGGTGCAATaGGTTAAATATGTCACAGGCAGGACTACGCATGAA +
Preference number: 6 (lower is better)
Translates to: GLIHVLVHFMVQ*VKYVTGRTTHE
Trigger: TTCATGCGTAGTCCTGCCTGTGACATATTTAACCCATTGCACCATGAAGTGTACCAAGACATGGATCAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp TTCATTACACATTCTAACTGTCTGGGGAAAGGCACTTaGCACATTTCTGCTTTAGCCTGCTCAGTCGGCCTG +
Preference number: 6 (lower is better)
Translates to: FITHSNCLGKGT*HISALACSVGL
Trigger: CAGGCCGACTGAGCAGGCTAAAGCAGAAATGTGCAAAGTGCCTTTCCCCAGACAGTTAGAATGTGTAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS TCA 72 bp GTTCTTTGTCCAACAAAGTCTCGTCCAATGGGATCGTaGTCCCACACAAGGAACCGAACCAAAGCTATTTCT +
Preference number: 6 (lower is better)
Translates to: VLCPTKSRPMGS*SHTRNRTKAIS
Trigger: AGAAATAGCTTTGGTTCGGTTCCTTGTGTGGGATCACGATCCCATTGGACGAGACTTTGTTGGACAAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp GTTCCACGTTTCAGCTTGATCATCTGTGTCCCGGACTaGATCACACTCATGCATCTTTCAACTTTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: VPRFSLIICVPD*ITLMHLSTFSG
Trigger: TCCAGAAAAAGTTGAAAGATGCATGAGTGTGATGCAGTCCGGGACACAGATGATCAAGCTGAAACGTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340059.11
ENST00000447496.6
ENST00000494598.5
CDS CCA 72 bp TGCCTAGGATTCTTATTGAACAGTCCCTTCAGACCCTaGAGTTGTCTGTTCTTTGTAGCTCCTAGAAAGTGC +
Preference number: 6 (lower is better)
Translates to: CLGFLLNSPFRP*SCLFFVAPRKC
Trigger: GCACTTTCTAGGAGCTACAAAGAACAGACAACTCCAGGGTCTGAAGGGACTGTTCAATAAGAATCCTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340059.11
ENST00000447496.6
CDS CAA 90 bp ATTTCCATCTTCATTACACATTCTAACTGTCTGGGGAAAGGCACTTaGCACATTTCTGCTTTAGCCTGCTCAGTCGGCCTGCAAAAGCTA +
Preference number: 6 (lower is better)
Translates to: ISIFITHSNCLGKGT*HISALACSVGLQKL
Trigger: TAGCTTTTGCAGGCCGACTGAGCAGGCTAAAGCAGAAATGTGCAAAGTGCCTTTCCCCAGACAGTTAGAATGTGTAATGAAGATGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CAA 72 bp AGCAATGTAGTAGTTGCAGAGGGGCTGATCCATGTCTaGGTACACTTCATGGTGCAATGGGTTAAATATGTC +
Preference number: 6 (lower is better)
Translates to: SNVVVAEGLIHV*VHFMVQWVKYV
Trigger: GACATATTTAACCCATTGCACCATGAAGTGTACCAAGACATGGATCAGCCCCTCTGCAACTACTACATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp CTTCGGGGCAGATTAACATTCAGTTTATGCATCAGCTaGTGTATCTCTTCAATATTCAGCAAGCCGTCACCA +
Preference number: 6 (lower is better)
Translates to: LRGRLTFSLCIS*CISSIFSKPSP
Trigger: TGGTGACGGCTTGCTGAATATTGAAGAGATACATCAGCTGATGCATAAACTGAATGTTAATCTGCCCCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 72 bp TTTCCAAGTTCCAGTAACTCATTGTCAGAAGATTTCTaGCACAGCATCAAAACCAAATTGCCCTCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: FPSSSNSLSEDF*HSIKTKLPSSA
Trigger: AGCTGAGGAGGGCAATTTGGTTTTGATGCTGTGCCAGAAATCTTCTGACAATGAGTTACTGGAACTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460012.7
CDS CAA 90 bp CAGTTTGTCTCCGAATATTCCTTTCAGGTACTGAGCAATCTTCCTTaGCTGCTGGATACTGCAGTGATTCTCGATAGACAATATAACAGG +
Preference number: 6 (lower is better)
Translates to: QFVSEYSFQVLSNLP*LLDTAVILDRQYNR
Trigger: CCTGTTATATTGTCTATCGAGAATCACTGCAGTATCCAGCAGCAAAGGAAGATTGCTCAGTACCTGAAAGGAATATTCGGAGACAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp GTTGATGGTCTCCACAACATCTCTGAAGAGAATTTTTaGAGTGAGAGTGTAACCATGATGTACTACTGGCTC +
Preference number: 6 (lower is better)
Translates to: VDGLHNISEENF*SESVTMMYYWL
Trigger: GAGCCAGTAGTACATCATGGTTACACTCTCACTTCAAAAATTCTCTTCAGAGATGTTGTGGAGACCATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp ATGTTTTCCAAAGTTGGTCATGAGGGATCGTCCATGTaGTTTCTTTCCACTTTCCTTTACATCTGGACTCTG +
Preference number: 6 (lower is better)
Translates to: MFSKVGHEGSSM*FLSTFLYIWTL
Trigger: CAGAGTCCAGATGTAAAGGAAAGTGGAAAGAAATCACATGGACGATCCCTCATGACCAACTTTGGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp ATTTTTGCTGAACAACCTGATGTGCTCTTGTTTCACTaGATGATAACACATTTCCTGTGGTTCCGTCATCCA +
Preference number: 6 (lower is better)
Translates to: IFAEQPDVLLFH*MITHFLWFRHP
Trigger: TGGATGACGGAACCACAGGAAATGTGTTATCATTCAGTGAAACAAGAGCACATCAGGTTGTTCAGCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS TCA 72 bp AATGGATCGCTTCCGTACATAATGGGAATTGTTTTCTaGAGAACTGTGCCTAGGATTCTTATTGAACAGTCC +
Preference number: 6 (lower is better)
Translates to: NGSLPYIMGIVF*RTVPRILIEQS
Trigger: GGACTGTTCAATAAGAATCCTAGGCACAGTTCTTCAGAAAACAATTCCCATTATGTACGGAAGCGATCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp TTCTTCCCACACAGGGTTAAATCCATTGTCATCTACCACACGGGTTaGATCTTTACAACAATCTACTGGCAATCCAATAATTTCAACTTC +
Preference number: 6 (lower is better)
Translates to: FFPHRVKSIVIYHTG*IFTTIYWQSNNFNF
Trigger: GAAGTTGAAATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGATGACAATGGATTTAACCCTGTGTGGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 72 bp TTATATTCAAGAAGAGAAGAGAGATCAGTCTGGGTTTaGGGATTCAGGTCTCGGAAATTTCCATCTTCATTA +
Preference number: 6 (lower is better)
Translates to: LYSRREERSVWV*GFRSRKFPSSL
Trigger: TAATGAAGATGGAAATTTCCGAGACCTGAATCCCCAAACCCAGACTGATCTCTCTTCTCTTCTTGAATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494598.5
CDS CAA 72 bp CACAGGGTTAAATCCATTGTCATCTACCACACGGGTTaGATCTTTACAACAATCTACTGGCAATCCAATAAT +
Preference number: 6 (lower is better)
Translates to: HRVKSIVIYHTG*IFTTIYWQSNN
Trigger: ATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGATGACAATGGATTTAACCCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 90 bp GTGAACACAGATTACCATCTTACCATTGTCATCTACCACACGGGTTaGATCTTTACAACAATCTACTGGCAATCCAATAATTTCAACTTC +
Preference number: 6 (lower is better)
Translates to: VNTDYHLTIVIYHTG*IFTTIYWQSNNFNF
Trigger: GAAGTTGAAATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGATGACAATGGTAAGATGGTAATCTGTGTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469040.1
CDS TCA 72 bp ACAGGGTTAAATCCATTGTCATCTACCACACGGGTTTaGTCTTTACAACAATCTACTGGCAATCCAATAATT +
Preference number: 6 (lower is better)
Translates to: TGLNPLSSTTRV*SLQQSTGNPII
Trigger: AATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGATGACAATGGATTTAACCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS GCA 72 bp ATAGATTTCATTGATGGTTATGTGTACAAATATGGATaGTTCTGTCAGTCCTTCCAAATAGACATGCCGGTA +
Preference number: 6 (lower is better)
Translates to: IDFIDGYVYKYG*FCQSFQIDMPV
Trigger: TACCGGCATGTCTATTTGGAAGGACTGACAGAAGCATCCATATTTGTACACATAACCATCAATGAAATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CCA 72 bp ATCTACCACACGGGTTTGATCTTTACAACAATCTACTaGCAATCCAATAATTTCAACTTCAACAAAAGGGTC +
Preference number: 6 (lower is better)
Translates to: IYHTGLIFTTIY*QSNNFNFNKRV
Trigger: GACCCTTTTGTTGAAGTTGAAATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000469040.1
ENST00000494598.5
CDS CAA 72 bp ATAACAGGAAACTCATTCTTCACAAAGGCATGCTTGTaGATGGTCTCCACAACATCTCTGAAGAGAATTTTT +
Preference number: 6 (lower is better)
Translates to: ITGNSFFTKACL*MVSTTSLKRIF
Trigger: AAAAATTCTCTTCAGAGATGTTGTGGAGACCATCAACAAGCATGCCTTTGTGAAGAATGAGTTTCCTGTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS CAA 72 bp GATTACCATCTTACCATTGTCATCTACCACACGGGTTaGATCTTTACAACAATCTACTGGCAATCCAATAAT +
Preference number: 6 (lower is better)
Translates to: DYHLTIVIYHTG*IFTTIYWQSNN
Trigger: ATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGATGACAATGGTAAGATGGTAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469040.1
CDS CAA 90 bp ATAGACAATATAACAGGAAACTCATTCTTCACAAAGGCATGCTTGTaGATGGTCTCCACAACATCTCTGAAGAGAATTTTTGAAGTGAGA +
Preference number: 6 (lower is better)
Translates to: IDNITGNSFFTKACL*MVSTTSLKRIFEVR
Trigger: TCTCACTTCAAAAATTCTCTTCAGAGATGTTGTGGAGACCATCAACAAGCATGCCTTTGTGAAGAATGAGTTTCCTGTTATATTGTCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334686.6
ENST00000340059.11
ENST00000447496.6
ENST00000460012.7
ENST00000494598.5
CDS TCA 72 bp ATTACCATCTTACCATTGTCATCTACCACACGGGTTTaGTCTTTACAACAATCTACTGGCAATCCAATAATT +
Preference number: 6 (lower is better)
Translates to: ITILPLSSTTRV*SLQQSTGNPII
Trigger: AATTATTGGATTGCCAGTAGATTGTTGTAAAGATCAAACCCGTGTGGTAGATGACAATGGTAAGATGGTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469040.1