RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124181

Ensembl transcript IDs: ENST00000244007.7, ENST00000373271.5, ENST00000423733.3, ENST00000461641.5, ENST00000465571.2, ENST00000470528.1, ENST00000473632.1, ENST00000477870.5, ENST00000483175.5, ENST00000483646.2, ENST00000490253.1, ENST00000492148.5, ENST00000599785.5, ENST00000607954.1, ENST00000608689.5, ENST00000608885.5, ENST00000609257.5, ENST00000609821.5, ENST00000612731.2, ENST00000617873.4, ENST00000619272.2, ENST00000630423.1

Found 1003 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTaGTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGC +
Preference number: 1 (lower is better)
Translates to: IQASGCETRKAATGG*FQRTQFAAFYKAHS
Trigger: GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 90 bp CTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: LAEAASLSKGLRPWS*PHKMEGSISRSQGQ
Trigger: CTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 90 bp GCTGCTCTTGTCAAAGGGGTCGAAGGCCTCATCCCGCATGGTGCTTaGCTGCAGCACGTAGCCACAGTGCCTGCCCGTCATGAAGAGGGC +
Preference number: 1 (lower is better)
Translates to: AALVKGVEGLIPHGA*LQHVATVPARHEEG
Trigger: GCCCTCTTCATGACGGGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTGACAAGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR GCA 90 bp CTCAGGCAGGGCAGAACCCTTCTCCATGCAGGCCCTACATTCCTCTaGCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAC +
Preference number: 1 (lower is better)
Translates to: LRQGRTLLHAGPTFL*PGSRAKLQGHLASH
Trigger: GTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTAGGGCCTGCATGGAGAAGGGTTCTGCCCTGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR GCA 90 bp GTAGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTaGGCCCACGGGCCTGGACCCCGGCCTCTGTCCTCAGAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: VGLCVLNAGYAMRHL*AHGPGPRPLSSEVR
Trigger: CCTCACCTCTGAGGACAGAGGCCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAG +
Preference number: 1 (lower is better)
Translates to: VPLAEAASLSKGLRP*SWPHKMEGSISRSQ
Trigger: CTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 90 bp ACCCTGAGCCCAAATGTGGGCAGTAGGTTTGTGTGTGCTGAATGCTaGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCG +
Preference number: 1 (lower is better)
Translates to: TLSPNVGSRFVCAEC*LCYEAPLRPRAWTP
Trigger: CGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCTACTGCCCACATTTGGGCTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR GCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTaGGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACC +
Preference number: 1 (lower is better)
Translates to: LGFCLAFTAGIQASG*ETRKAATGGCFQRT
Trigger: GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR GCA 90 bp CCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTaGCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCAT +
Preference number: 1 (lower is better)
Translates to: PPPLLGMSVAPWSLL*HWLRQPLSPRGFGH
Trigger: ATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR GCA 90 bp CCAACCCTGAGCCCAAATGTGGGCAGTAGGTTTGTGTGTGCTGAATaGTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACC +
Preference number: 1 (lower is better)
Translates to: PTLSPNVGSRFVCAE*WLCYEAPLRPRAWT
Trigger: GGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCTACTGCCCACATTTGGGCTCAGGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CCA 90 bp CCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGCCACTaGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCT +
Preference number: 1 (lower is better)
Translates to: PLLGMSVAPWSLLCH*LRQPLSPRGFGHGP
Trigger: AGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR TCA 90 bp AGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTTCTGGTACCACTaGCTTCCCTCTCCCGGCCCTGCCTGCTCTTTTGGTTTGTGCTGC +
Preference number: 1 (lower is better)
Translates to: RTRSLQGSPSTFWYH*LPSPGPACSFGLCC
Trigger: GCAGCACAAACCAAAAGAGCAGGCAGGGCCGGGAGAGGGAAGTCAGTGGTACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 90 bp CAGGTCATAACCCTGAGCTGTCGCACTGTAGGGACACGGCCTGCATaGATGGGATGGGGCAAACAACTCCTGATGCCAAAGCATTCGGCC +
Preference number: 1 (lower is better)
Translates to: QVITLSCRTVGTRPA*MGWGKQLLMPKHSA
Trigger: GGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTGCGACAGCTCAGGGTTATGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 90 bp TCTGCTCATGGCCACAGATACTCAACTGAGGTCAGAAACTGCTCCTaGCATCTTCCCGCAGGGCAGTCTTTAGTCCTGTGGCGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: SAHGHRYSTEVRNCS*HLPAGQSLVLWRGQ
Trigger: CTGCCCCCGCCACAGGACTAAAGACTGCCCTGCGGGAAGATGGCAGGAGCAGTTTCTGACCTCAGTTGAGTATCTGTGGCCATGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp CCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGCCCCACAAGATaGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTA +
Preference number: 1 (lower is better)
Translates to: PLSPRGFGHGPGPTR*KDPSPEVRARCVCL
Trigger: TAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 90 bp ACCCTGAGCTGTCGCACTGTAGGGACACGGCCTGCATGCATGGGATaGGGCAAACAACTCCTGATGCCAAAGCATTCGGCCCCAAGTAAG +
Preference number: 1 (lower is better)
Translates to: TLSCRTVGTRPACMG*GKQLLMPKHSAPSK
Trigger: CTTACTTGGGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTGCGACAGCTCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp AACATGATCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATaGGCAATGTGCCCTTGTGCTGTGTCCTCCTCCTCAGGCAGGGCA +
Preference number: 1 (lower is better)
Translates to: NMIPCIFQAGSCSQP*AMCPCAVSSSSGRA
Trigger: TGCCCTGCCTGAGGAGGAGGACACAGCACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGATCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR TCA 90 bp CCCAGTCTACTTGTCCCTGGTCTGTCAGCCAGAAGGTTCTACTGGTaGTGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTT +
Preference number: 1 (lower is better)
Translates to: PSLLVPGLSARRFYW*WQENKEPAREPIYL
Trigger: AAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAGTAGAACCTTCTGGCTGACAGACCAGGGACAAGTAGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 90 bp GAGGCAGACCCCTGCCTTTTCTGCTCATGGCCACAGATACTCAACTaGGGTCAGAAACTGCTCCTGCCATCTTCCCGCAGGGCAGTCTTT +
Preference number: 1 (lower is better)
Translates to: EADPCLFCSWPQILN*GQKLLLPSSRRAVF
Trigger: AAAGACTGCCCTGCGGGAAGATGGCAGGAGCAGTTTCTGACCTCAGTTGAGTATCTGTGGCCATGAGCAGAAAAGGCAGGGGTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 90 bp TCCACAGGTCATAACCCTGAGCTGTCGCACTGTAGGGACACGGCCTaGATGCATGGGATGGGGCAAACAACTCCTGATGCCAAAGCATTC +
Preference number: 1 (lower is better)
Translates to: STGHNPELSHCRDTA*MHGMGQTTPDAKAF
Trigger: GAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTGCGACAGCTCAGGGTTATGACCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 90 bp GTCAGCCAGAAGGTTCTACTGGTGATGGCAGGAGAACAAGGAGCCTaGAAGGGAGCCCATCTACCTTCTGGTACCACTGACTTCCCTCTC +
Preference number: 1 (lower is better)
Translates to: VSQKVLLVMAGEQGA*KGAHLPSGTTDFPL
Trigger: GAGAGGGAAGTCAGTGGTACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAGTAGAACCTTCTGGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 90 bp GCCTTTTCTGCTCATGGCCACAGATACTCAACTGAGGTCAGAAACTaGTCCTGCCATCTTCCCGCAGGGCAGTCTTTAGTCCTGTGGCGG +
Preference number: 1 (lower is better)
Translates to: AFSAHGHRYSTEVRN*SCHLPAGQSLVLWR
Trigger: CCGCCACAGGACTAAAGACTGCCCTGCGGGAAGATGGCAGGAGCAGTTTCTGACCTCAGTTGAGTATCTGTGGCCATGAGCAGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 90 bp CATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATaGCTCGGCCATTCTTTGGCAGATGTCGGGCCCCCAGCACCTCAA +
Preference number: 1 (lower is better)
Translates to: HTQLQPPQSPQKDTQ*LGHSLADVGPPAPQ
Trigger: TTGAGGTGCTGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CCA 90 bp CTGGAAAGGGGCTCTGGTTGTTTCCAGCTCACCACCAAAACTGGCTaGCCACAAAGAACCCAGGCAGGATGTACTCTGCTCAGACACACC +
Preference number: 1 (lower is better)
Translates to: LERGSGCFQLTTKTG*PQRTQAGCTLLRHT
Trigger: GGTGTGTCTGAGCAGAGTACATCCTGCCTGGGTTCTTTGTGGCCAGCCAGTTTTGGTGGTGAGCTGGAAACAACCAGAGCCCCTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp AGAAACTGCTCCTGCCATCTTCCCGCAGGGCAGTCTTTAGTCCTGTaGCGGGGGCAGAATGCCCCTGACCTTGTAGGCTCTACTTTGTAT +
Preference number: 1 (lower is better)
Translates to: RNCSCHLPAGQSLVL*RGQNAPDLVGSTLY
Trigger: ATACAAAGTAGAGCCTACAAGGTCAGGGGCATTCTGCCCCCGCCACAGGACTAAAGACTGCCCTGCGGGAAGATGGCAGGAGCAGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp GGAACTGGAAAGGGGCTCTGGTTGTTTCCAGCTCACCACCAAAACTaGCTGGCCACAAAGAACCCAGGCAGGATGTACTCTGCTCAGACA +
Preference number: 1 (lower is better)
Translates to: GTGKGLWLFPAHHQN*LATKNPGRMYSAQT
Trigger: TGTCTGAGCAGAGTACATCCTGCCTGGGTTCTTTGTGGCCAGCCAGTTTTGGTGGTGAGCTGGAAACAACCAGAGCCCCTTTCCAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp CACCTCAATCTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTaGCAGATGTCGGGCCCCCAGCACCTCAATAGAGATGGCACATGG +
Preference number: 1 (lower is better)
Translates to: HLNLHKRTHNASAIL*QMSGPQHLNRDGTW
Trigger: CCATGTGCCATCTCTATTGAGGTGCTGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR GCA 90 bp CCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTaGCCAGCTGTGGTTTTAAAGCTACAGGACAATGTAAACTTTGTT +
Preference number: 1 (lower is better)
Translates to: PWLQGQTAGASSFSP*PAVVLKLQDNVNFV
Trigger: AACAAAGTTTACATTGTCCTGTAGCTTTAAAACCACAGCTGGGCAGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CCA 90 bp AATAACATCTCATTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTaGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGG +
Preference number: 1 (lower is better)
Translates to: NNISLMAWFLSSIHC*NPGFRLRDPEGRHR
Trigger: CCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAATGAGATGTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 90 bp ATCATGAGGGCCCAGGTGAATTCCCACCCACCACCTTCTTGTGTATaGGAAAAAGCCACCCTCCTCTCTATGAACTGGGACTGTGAAGCT +
Preference number: 1 (lower is better)
Translates to: IMRAQVNSHPPPSCV*EKATLLSMNWDCEA
Trigger: AGCTTCACAGTCCCAGTTCATAGAGAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGGTGGGTGGGAATTCACCTGGGCCCTCATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp TTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATaGGGACGCAGTCCTTCAACAGAGAAGTTTCCTGCCCAGCTGTGG +
Preference number: 1 (lower is better)
Translates to: FIPELLPAHKSDLFE*GRSPSTEKFPAQLW
Trigger: CCACAGCTGGGCAGGAAACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607954.1
3UTR GCA 90 bp AGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCAC +
Preference number: 1 (lower is better)
Translates to: SNNISLMAWFLSSIH*WNPGFRLRDPEGRH
Trigger: GTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAATGAGATGTTATTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR GCA 90 bp GAGAAGGGCCTTTCAACTGTGTTGAAAGGGCCCAGAGATTTCAGCTaGCAAGTCCTAGAGGCAATCAGAATGGCACCTGGCAGTGTTAAC +
Preference number: 1 (lower is better)
Translates to: EKGLSTVLKGPRDFS*QVLEAIRMAPGSVN
Trigger: GTTAACACTGCCAGGTGCCATTCTGATTGCCTCTAGGACTTGGCAGCTGAAATCTCTGGGCCCTTTCAACACAGTTGAAAGGCCCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp GCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTaGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTTCATTCCTGAGC +
Preference number: 1 (lower is better)
Translates to: ALGCEVNGSTESVWP*RGVESLLFGSSFLS
Trigger: GCTCAGGAATGAAGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR CCA 90 bp GCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTaGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTTCATTC +
Preference number: 1 (lower is better)
Translates to: ASALGCEVNGSTESV*PWRGVESLLFGSSF
Trigger: GAATGAAGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR TCA 90 bp CTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCTaGGCCCCCGAAAGAGCATACAAGTCAAAGGAAAAAGGACATGAG +
Preference number: 1 (lower is better)
Translates to: LATVSSEHVPCNRLS*APERAYKSKEKGHE
Trigger: CTCATGTCCTTTTTCCTTTGACTTGTATGCTCTTTCGGGGGCTCAGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 90 bp ATTTGCAGTGAGGCAAAGGCAATGTCTTACAGAGCCCAAGAGAGGTaGGCCTCAGGTCTACAAAGCTGCCTTAAGAAAGGCAGAGCTGTC +
Preference number: 1 (lower is better)
Translates to: ICSEAKAMSYRAQER*ASGLQSCLKKGRAV
Trigger: GACAGCTCTGCCTTTCTTAAGGCAGCTTTGTAGACCTGAGGCTCACCTCTCTTGGGCTCTGTAAGACATTGCCTTTGCCTCACTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 90 bp ATGCACTGGCTGAAGAGTTGGTCTTGGCAGGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACTCCAGGTCCTCACTGTAGTTGTTCT +
Preference number: 1 (lower is better)
Translates to: MHWLKSWSWQGKCQS*SAGRPTPGPHCSCS
Trigger: AGAACAACTACAGTGAGGACCTGGAGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCCTGCCAAGACCAACTCTTCAGCCAGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CCA 90 bp AAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAAGGGCTTGGCTaGCCATACAGGGTTGAGTCCATTGTCCACCACAAACTCTGTCTT +
Preference number: 1 (lower is better)
Translates to: KGKFRVTDLEVEGLG*PYRVESIVHHKLCL
Trigger: AAGACAGAGTTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR TCA 90 bp ATGTCTGCTGAGCCAAAGCTGTTGAAAGTGAAAGGTCTGTCACTTTaGACCCAGTCTACTTGTCCCTGGTCTGTCAGCCAGAAGGTTCTA +
Preference number: 1 (lower is better)
Translates to: MSAEPKLLKVKGLSL*TQSTCPWSVSQKVL
Trigger: TAGAACCTTCTGGCTGACAGACCAGGGACAAGTAGACTGGGTTCAAAGTGACAGACCTTTCACTTTCAACAGCTTTGGCTCAGCAGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp TGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTG +
Preference number: 1 (lower is better)
Translates to: WGMEAQNSNNISLMA*FLSSIHCWNPGFRL
Trigger: CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR TCA 90 bp ACTGCTCTGTATCCTGTCTTCAGGCCTTTTACTGGGAAAGTAGCCTaGGCCAGGAAATTCTGGTCACTAAACATGTCTTCCTCATACACC +
Preference number: 1 (lower is better)
Translates to: TALYPVFRPFTGKVA*ARKFWSLNMSSSYT
Trigger: GGTGTATGAGGAAGACATGTTTAGTGACCAGAATTTCCTGGCTCAGGCTACTTTCCCAGTAAAAGGCCTGAAGACAGGATACAGAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR GCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTaGTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCT +
Preference number: 1 (lower is better)
Translates to: TRWKDPSPEVRARCV*LMRNTVQFLPSSRA
Trigger: AGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR TCA 90 bp AGCTGTAAAAGAAAGTCACACAAGAACCTGAGCACTATCGCTGTTTaGTACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCT +
Preference number: 1 (lower is better)
Translates to: SCKRKSHKNLSTIAV*YWLSSVHVIHGTGS
Trigger: AGATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGCTCAGGTTCTTGTGTGACTTTCTTTTACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 90 bp AACAGAACTCACATGGTGAGTGATGGGCTCAAGTTGAAAGACAAGTaGGTGTCTAGGTCCTTAGTGATGTTCAAGCTCTCAGGTGATGTT +
Preference number: 1 (lower is better)
Translates to: NRTHMVSDGLKLKDK*VSRSLVMFKLSGDV
Trigger: AACATCACCTGAGAGCTTGAACATCACTAAGGACCTAGACACTCACTTGTCTTTCAACTTGAGCCCATCACTCACCATGTGAGTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp GTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTaGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCT +
Preference number: 1 (lower is better)
Translates to: VLNAKHSTVFAFIQS*GMEAQNSNNISLMA
Trigger: AGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 90 bp AAATGTGAAGAAGGCATGATCCTTTCATTCACCGAGTTAGTCTGGTaGGATAACCTGAACCTATTTGCTTTCTACCCACCCTCAACAGAA +
Preference number: 1 (lower is better)
Translates to: KCEEGMILSFTELVW*DNLNLFAFYPPSTE
Trigger: TTCTGTTGAGGGTGGGTAGAAAGCAAATAGGTTCAGGTTATCCCACCAGACTAACTCGGTGAATGAAAGGATCATGCCTTCTTCACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 90 bp ATGAACTGGGACTGTGAAGCTGTAAAAGAAAGTCACACAAGAACCTaGGCACTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCA +
Preference number: 1 (lower is better)
Translates to: MNWDCEAVKESHTRT*ALSLFDTGYHQFMS
Trigger: TGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGCTCAGGTTCTTGTGTGACTTTCTTTTACAGCTTCACAGTCCCAGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 90 bp CTGCTTAACCTGAGAAATTTCCAGAAATTTCCTACCTGCTTCTACTaGAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCAT +
Preference number: 1 (lower is better)
Translates to: LLNLRNFQKFPTCFY*RIIIWRLFLVSMSH
Trigger: ATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAGAAGCAGGTAGGAAATTTCTGGAAATTTCTCAGGTTAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 90 bp TTAAAATGTGAAGAAGGCATGATCCTTTCATTCACCGAGTTAGTCTaGTGGGATAACCTGAACCTATTTGCTTTCTACCCACCCTCAACA +
Preference number: 1 (lower is better)
Translates to: LKCEEGMILSFTELV*WDNLNLFAFYPPST
Trigger: TGTTGAGGGTGGGTAGAAAGCAAATAGGTTCAGGTTATCCCACCAGACTAACTCGGTGAATGAAAGGATCATGCCTTCTTCACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR GCA 90 bp AGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCCGGGGCCACAAGCTGACTaGCACAGATCCACATGGGCA +
Preference number: 2 (lower is better)
Translates to: RPHPAWCLAAARSHSACPGPQAD*HRSTWA
Trigger: TGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCCC...CGGGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 90 bp ACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTaGTCAAAGGGGTCGAAGGCCTCATCCCGCATGGTGCTTGGCTGC +
Preference number: 2 (lower is better)
Translates to: TSIEMAHGSSPRRLL*SKGSKASSRMVLGC
Trigger: GCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 90 bp AGTAGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTaGCGCCCACGGGCCTGGACCCCGGCCTCTGTCCTCAGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: SRFVCAECWLCYEAP*RPRAWTPASVLRGE
Trigger: CTCACCTCTGAGGACAGAGGCCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR TCA 90 bp CAAAGGGGTCGAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACTTGAGGGCCACAAGCTaGCTGCCACAGATCCACATG +
Preference number: 2 (lower is better)
Translates to: QRGRRPHPAWCLAAARSHLRATS*LPQIHM
Trigger: CATGTGGATCTGTGGCAGTCAGCTTGTGGCCCTCAA...GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR GCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGCGCACAGCACCTGCTaGTCTCCAACGAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALAHSTC*SPTRLG
Trigger: CCCCAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGC...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR CCA 90 bp GAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCGCAAAGGATCGTAGTTaGAGGAATCCAGTCGCTGGC +
Preference number: 2 (lower is better)
Translates to: EGLIPHGAWLQHVATVPAAKDRS*RNPVAG
Trigger: GCCAGCGACTGGATTCCTCCAACTACGATCCTTTGC...GGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR TCA 90 bp ACACGCCAAGGACGTCCTAACCAACGTGGATGGGCCCTAACAGAAGGGCCTACAATGCTGGCTATGCTATaGGGCACCTTTGCGCCCACG +
Preference number: 2 (lower is better)
Translates to: TRQGRPNQRGWALTEGPTMLAML*GTFAPT
Trigger: CGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCAT...TGTAGGCCCTTCTGTTAGGGCCCATCCACGTTGGTTAGGACGTCCTTGGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR GCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGGCCCTACATTCCTCTaGCCTGGCTCCAGGGCCAAA +
Preference number: 2 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALGPTFL*PGSRAK
Trigger: TTTGGCCCTGGAGCCAGGGCAGAGGAATGTAGGGCC...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR GCA 90 bp ACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTCGGCCATCCAGCCCGCGGAGGCTaGTCTTGTCAAAGGGGTCGA +
Preference number: 2 (lower is better)
Translates to: TQLQPPQSPQKDTQCLGHPARGG*SCQRGR
Trigger: TCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGG...ATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CCA 90 bp GAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAAGGGGTCGAAGTGCCACAGATCCACATaGGCAAAGGATCGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: EMAHGSSPRRLLLSKGSKCHRST*AKDRSW
Trigger: CCAACTACGATCCTTTGCCCATGTGGATCTGTGGCA...CTTCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CCA 90 bp CTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCGGGCCCCGGCTTGTCAGGGGTCTaGAAGTTGAGGGCCACAAGC +
Preference number: 2 (lower is better)
Translates to: LHKRTHNASAILWQMSGPGLSGV*KLRATS
Trigger: GCTTGTGGCCCTCAACTTCCAGACCCCTGACAAGCC...GGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CCA 90 bp CACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAAATCCCGCATGGTGCTTaGCTGCAGCACGTAGCCACA +
Preference number: 2 (lower is better)
Translates to: HLNRDGTWLQPAEAALVKIPHGA*LQHVAT
Trigger: TGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGAT...TTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR TCA 90 bp CTGGTGATGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTTCTGGTCCACCCTCCTCTCTATaGACTGGGACTGTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: LVMAGEQGACKGAHLPSGPPSSL*TGTVKL
Trigger: CAGCTTCACAGTCCCAGTTCATAGAGAGGAGGGTGG...ACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR GCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGGCCGCCACAGGGGGCTaGTTCCAAAGAACCCAGTTC +
Preference number: 2 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVAATGG*FQRTQF
Trigger: GAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGC...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR CCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATG +
Preference number: 2 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVKGLRP*SWPHKM
Trigger: CATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTT...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR TCA 90 bp TCAGGGTTACTGATCTGGAAGTGGAAGGGCTTGGCTGGCCATACAGGGTTGAGTAGTGCCTGCCCGTCATaGAGAGGGCCTGGTTCATCT +
Preference number: 2 (lower is better)
Translates to: SGLLIWKWKGLAGHTGLSSACPS*RGPGSS
Trigger: AGATGAACCAGGCCCTCTTCATGACGGGCAGGCACT...ACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR GCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCGCACAGCACCTGCTaGTCTCCAACGAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGAHSTC*SPTRLG
Trigger: CCCCAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGC...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR GCA 90 bp CACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTTTCCTGCGCACAGCACCTGCTaGTCTCCAACGAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: HKSDLFEWGRSPSTEKFPAHSTC*SPTRLG
Trigger: CCCCAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGC...AGGAAACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
3UTR-3UTR CCA 90 bp CCTCAATCTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCAGGCCTCATCCCGCATaGTGCTTGGCTGCAGCACGT +
Preference number: 2 (lower is better)
Translates to: PQSPQKDTQCLGHSLADVRPHPA*CLAAAR
Trigger: ACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCT...GACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR TCA 90 bp GGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGCCTGCATGCACTGGCTaGAGAGTTGGTCGAGCGTCT +
Preference number: 2 (lower is better)
Translates to: GSSFLSSCLPTNLTSLNGPACTG*RVGRAS
Trigger: AGACGCTCGACCAACTCTTCAGCCAGTGCATGCAGG...CCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR-3UTR GCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGAAGGCGCACAGCACCTaGTGCTCTCCAACGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMKAHST*CSPTRL
Trigger: CAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGCCTT...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR GCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTCTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALLSSIH*WNPGFR
Trigger: CCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAG...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR GCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGACACAGTACAGTTTTTaGCTTCATCCAGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVTQYSF*LHPELG
Trigger: CCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGT...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR CCA 90 bp AATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCCTGCTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGA +
Preference number: 2 (lower is better)
Translates to: NHLATVSSEHVPCNRLSLLRPWS*PHKMEG
Trigger: TCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAG...CAGGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609257.5
3UTR-3UTR CCA 90 bp GCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTTTAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATG +
Preference number: 2 (lower is better)
Translates to: AHKSDLFEWGRSPSTEKFKGLRP*SWPHKM
Trigger: CATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTT...AAACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607954.1
3UTR-3UTR CCA 90 bp ATACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAACCAGTCGCTGGCCCTTaGGGTAGATGCGGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: IHHEAQKGKFRVTDLEVEPVAGP*GRCGRA
Trigger: AGCTCTCCCGCATCTACCCCAAGGGCCAGCGACTGG...TTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 90 bp CCTTCTGGTACCACTGACTTCCCTCTCCCGGCCCTGCCTGCTCTTTaGGTTTGTGCTGCCAAAATCAGGGTTTTTCAACCCTTGTTACTC +
Preference number: 2 (lower is better)
Translates to: PSGTTDFPLPALPAL*VCAAKIRVFQPLLL
Trigger: GAGTAACAAGGGTTGAAAAACCCTGATTTTGGCAGCACAAACCAAAAGAGCAGGCAGGGCCGGGAGAGGGAAGTCAGTGGTACCAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR TCA 90 bp ATACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAACAGGGGTCTGGAAGTTaGGGGCCACAAGCTGACTGC +
Preference number: 2 (lower is better)
Translates to: IHHEAQKGKFRVTDLEVEQGSGS*GPQADC
Trigger: GCAGTCAGCTTGTGGCCCTCAACTTCCAGACCCCTG...TTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR GCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTGCGCACAGCACCTGCTaGTCTCCAACGAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSAHSTC*SPTRLG
Trigger: CCCCAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGC...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR GCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCGCCGCCACAGGGGGCTaGTTCCAAAGAACCCAGTTC +
Preference number: 2 (lower is better)
Translates to: GFKATGQCKLCFPGPARLAATGG*FQRTQF
Trigger: GAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGC...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR GCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGCTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVLSSIH*WNPGFR
Trigger: CCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAG...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAGGGCCAGATGTGTGTaGTTAATGCGAAACACAGTA +
Preference number: 2 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSRARCV*LMRNTV
Trigger: TACTGTGTTTCGCATTAAGCACACACATCTGGCCCT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR GCA 90 bp CCTCAATCTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCAGGGCCTGGTTCATCTaGATAGGCTTGTCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: PQSPQKDTQCLGHSLADVRAWFI*IGLSGV
Trigger: GACCCCTGACAAGCCTATGCAGATGAACCAGGCCCT...GACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATG +
Preference number: 2 (lower is better)
Translates to: GFKATGQCKLCFPGPARLKGLRP*SWPHKM
Trigger: CATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTT...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CAA 90 bp GTCCTGTGGCGGGGGCAGAATGCCCCTGACCTTGTAGGCTCTACTTaGTATGTGTACATGTCTGCTGAGCCAAAGCTGTTGAAAGTGAAA +
Preference number: 2 (lower is better)
Translates to: VLWRGQNAPDLVGST*YVYMSAEPKLLKVK
Trigger: TTTCACTTTCAACAGCTTTGGCTCAGCAGACATGTACACATACAAAGTAGAGCCTACAAGGTCAGGGGCATTCTGCCCCCGCCACAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CAA 90 bp CGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAAGGGCTaGGCTGGCCATACAGGGTTGAGTCCATTGTCCACCACAAACTCT +
Preference number: 2 (lower is better)
Translates to: RRKANSGLLIWKWKG*AGHTGLSPLSTTNS
Trigger: AGAGTTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR TCA 90 bp CACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTTTCCTCCTGCATGCACTGGCTaGAGAGTTGGTCGAGCGTCT +
Preference number: 2 (lower is better)
Translates to: HKSDLFEWGRSPSTEKFPPACTG*RVGRAS
Trigger: AGACGCTCGACCAACTCTTCAGCCAGTGCATGCAGG...AGGAAACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
3UTR-3UTR GCA 90 bp TTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGACACTTGTGGCAATGTGCCCTTGTaGTGTGTCCTCCTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: LRKAELSVPQVVFQKDTCGNVPL*CVLLLR
Trigger: CCTGAGGAGGAGGACACAGCACAAGGGCACATTGCC...ACAAGTGTCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR GCA 90 bp AGCTGCCTTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGAGCTGAATGCTGGCTATaGTATGAGGCACCTTTGCGC +
Preference number: 2 (lower is better)
Translates to: SCLKKGRAVCSPGCVPERAECWL*YEAPLR
Trigger: GCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGC...TCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAAGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR CCA 90 bp AGCTGCCTTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGAATGTCAGTAGCTCCTTaGAGTCTCCTGTGCCACTGG +
Preference number: 2 (lower is better)
Translates to: SCLKKGRAVCSPGCVPERMSVAP*SLLCHW
Trigger: CCAGTGGCACAGGAGACTCCAAGGAGCTACTGACAT...TCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAAGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR CCA 90 bp CTCCTGATGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTCCCCACCAACAAACACAGCACAGCCAACTATaGAAACAGAGCTTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LLMPKHSAPSKGLPHQQTQHSQL*KQSFRK
Trigger: CTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTG...TGTTTGTTGGTGGGGAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR TCA 90 bp GGGCTTGGCTGGCCATACAGGGTTGAGTCCATTGTCCACCACAAACTCTGTCTTTGCAGTCGATTGTACTaGAGGAACTTCTTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: GLGWPYRVESIVHHKLCLCSRLY*RNFLPL
Trigger: CAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCA...AAGACAGAGTTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR TCA 90 bp GCTGAAGAGTTGGTCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGTTGGTTCTTCATTCCTaGGCTCTTGCCTGCCCACAA +
Preference number: 2 (lower is better)
Translates to: AEELVERLHLVVKLMGVQLVLHS*ALACPQ
Trigger: TTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAA...CTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGACCAACTCTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR-3UTR GCA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAAAGCAGGCAGCCCACCTaGCACTCTCCTCTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQSRQPT*HSPLQG
Trigger: ACCTTGGAGAGGAGAGTGGCAGGTGGGCTGCCTGCT...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR GCA 90 bp GCTGAAGAGTTGGTCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGTCATTCCTGAGCTCTTaGCTGCCCACAAATCTGACC +
Preference number: 2 (lower is better)
Translates to: AEELVERLHLVVKLMGVQSFLSS*LPTNLT
Trigger: GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGA...CTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGACCAACTCTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR CAA 90 bp AGTGGACCCACAACTCCTGTTAGCCCAGAGGAGGGGTTACAGCTCTaGCTGCTTAACCTGAGAAATTTCCAGAAATTTCCTACCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SGPTTPVSPEEGLQL*LLNLRNFQKFPTCF
Trigger: GAAGCAGGTAGGAAATTTCTGGAAATTTCTCAGGTTAAGCAGCAAGAGCTGTAACCCCTCCTCTGGGCTAACAGGAGTTGTGGGTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CAA 90 bp AAAGCTGTTGAAAGTGAAAGGTCTGTCACTTTGAACCCAGTCTACTaGTCCCTGGTCTGTCAGCCAGAAGGTTCTACTGGTGATGGCAGG +
Preference number: 2 (lower is better)
Translates to: KAVESERSVTLNPVY*SLVCQPEGSTGDGR
Trigger: CCTGCCATCACCAGTAGAACCTTCTGGCTGACAGACCAGGGACAAGTAGACTGGGTTCAAAGTGACAGACCTTTCACTTTCAACAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR GCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCATCTAGCTTCTCACCCTaGCCAGCTGTGGTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPSSFSP*PAVVLK
Trigger: CTTTAAAACCACAGCTGGGCAGGGTGAGAAGCTAGA...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR CCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGCTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGA +
Preference number: 2 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLLRPWS*PHKMEG
Trigger: TCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAG...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR CCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGTACATTCCTCTGCCCTaGCTCCAGGGCCAAACTGCA +
Preference number: 2 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLYIPLP*LQGQTA
Trigger: TGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR-3UTR CCA 90 bp AGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTTCTAGCATTCACTGCTaGAATCCAGGCTTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RIIIWRLFLVSMSHATGFSSIHC*NPGFRL
Trigger: CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA...AAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000609257.5
3UTR-3UTR CCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGCTGTATCTTTCAGGCTaGGTCATGTTCCCAGCCATG +
Preference number: 2 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLLYLSG*VMFPAM
Trigger: CATGGCTGGGAACATGACCCAGCCTGAAAGATACAG...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CAA 90 bp TCATCAGTTCATGTCATCCACGGAACCGGATCTATCTTAAATTTTTaGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGG +
Preference number: 2 (lower is better)
Translates to: SSVHVIHGTGSILNF*CGVIFVPSQHSQLW
Trigger: CCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAAATTTAAGATAGATCCGGTTCCGTGGATGACATGAACTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
3UTR-3UTR CCA 90 bp AAAACTAAAAGGGTCAACACTAACAAACACGCCAAGGACGTCCTAACCAACGTGCTCCTCTCTATGAACTaGGACTGTGAAGCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: KTKRVNTNKHAKDVLTNVLLSMN*DCEAVK
Trigger: TTTTACAGCTTCACAGTCCCAGTTCATAGAGAGGAG...CACGTTGGTTAGGACGTCCTTGGCGTGTTTGTTAGTGTTGACCCTTTTAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR-3UTR CCA 90 bp CACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTTTCCTATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCAC +
Preference number: 2 (lower is better)
Translates to: HKSDLFEWGRSPSTEKFPISLMA*FLSSIH
Trigger: GTGAATGCTAGACAGAAACCAAGCCATTAATGAGAT...AGGAAACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
3UTR-3UTR CCA 90 bp ATCAAAACATTTGCAGTGAGGCAAAGGCAATGTCTTACAGAGCCCAAGAGAGGTATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCAC +
Preference number: 2 (lower is better)
Translates to: IKTFAVRQRQCLTEPKRGISLMA*FLSSIH
Trigger: GTGAATGCTAGACAGAAACCAAGCCATTAATGAGAT...ACCTCTCTTGGGCTCTGTAAGACATTGCCTTTGCCTCACTGCAAATGTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp TGTCCTCCTCCTCAGGCAGGGCAGAACCCTTCTCCATaGAGGCCCTACATTCCTCTGCCCTGGCTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: CPPPQAGQNPSP*RPYIPLPWLQG
Trigger: GCCCTGGAGCCAGGGCAGAGGAATGTAGGGCCTGCATGGAGAAGGGTTCTGCCCTGCCTGAGGAGGAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR GCA 72 bp TCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTaGTTCCAAAGAACCCAGTTCGCGGCATTCTACAAG +
Preference number: 3 (lower is better)
Translates to: SGCETRKAATGG*FQRTQFAAFYK
Trigger: CTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR GCA 72 bp TGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTaGGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTC +
Preference number: 3 (lower is better)
Translates to: CLAFTAGIQASG*ETRKAATGGCF
Trigger: GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR GCA 72 bp TGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTaGGCCCACGGGCCTGGACCCCGGCCTCTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: CVLNAGYAMRHL*AHGPGPRPLSS
Trigger: TGAGGACAGAGGCCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CCA 72 bp GCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATGGAAGGATCCATCTCC +
Preference number: 3 (lower is better)
Translates to: AEAASLSKGLRP*SWPHKMEGSIS
Trigger: GGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 72 bp GTCAAAGGGGTCGAAGGCCTCATCCCGCATGGTGCTTaGCTGCAGCACGTAGCCACAGTGCCTGCCCGTCAT +
Preference number: 3 (lower is better)
Translates to: VKGVEGLIPHGA*LQHVATVPARH
Trigger: ATGACGGGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CCA 72 bp ATGTCGGGCCCCCAGCACCTCAATAGAGATGGCACATaGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAAGGG +
Preference number: 3 (lower is better)
Translates to: MSGPQHLNRDGT*LQPAEAALVKG
Trigger: CCCTTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTGCTGGGGGCCCGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CCA 72 bp GGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGCCACTaGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGC +
Preference number: 3 (lower is better)
Translates to: GMSVAPWSLLCH*LRQPLSPRGFG
Trigger: GCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGGAGCTACTGACATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 72 bp TCCTGCCATCTTCCCGCAGGGCAGTCTTTAGTCCTGTaGCGGGGGCAGAATGCCCCTGACCTTGTAGGCTCT +
Preference number: 3 (lower is better)
Translates to: SCHLPAGQSLVL*RGQNAPDLVGS
Trigger: AGAGCCTACAAGGTCAGGGGCATTCTGCCCCCGCCACAGGACTAAAGACTGCCCTGCGGGAAGATGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp TGCTCTTGTCAAAGGGGTCGAAGGCCTCATCCCGCATaGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGC +
Preference number: 3 (lower is better)
Translates to: CSCQRGRRPHPA*CLAAARSHSAC
Trigger: GCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTGACAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR GCA 72 bp GTGGGCAGTAGGTTTGTGTGTGCTGAATGCTGGCTATaGTATGAGGCACCTTTGCGCCCACGGGCCTGGACC +
Preference number: 3 (lower is better)
Translates to: VGSRFVCAECWL*YEAPLRPRAWT
Trigger: GGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCTACTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CCA 72 bp CCAAGGGGCTTCGGCCATGGTCCTGGCCCCACAAGATaGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGT +
Preference number: 3 (lower is better)
Translates to: PRGFGHGPGPTR*KDPSPEVRARC
Trigger: ACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 72 bp GCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGATCCATCTCCAGAAGT +
Preference number: 3 (lower is better)
Translates to: AASLSKGLRPWS*PHKMEGSISRS
Trigger: ACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR CAA 90 bp ACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTCGGCCATCCGCGGAGGCTGCTCTaGTCAAAGGGGTCGAAGGCC +
Preference number: 3 (lower is better)
Translates to: TQLQPPQSPQKDTQCLGHPRRLL*SKGSKA
Trigger: GGCCTTCGACCCCTTTGACAAGAGCAGCCTCCGCGG...ATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR TCA 72 bp CTTGTCCCTGGTCTGTCAGCCAGAAGGTTCTACTGGTaGTGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: LVPGLSARRFYW*WQENKEPAREP
Trigger: GGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAGTAGAACCTTCTGGCTGACAGACCAGGGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp ACCCTGAGCTGTCGCACTGTAGGGACACGGCCTGCATaGATGGGATGGGGCAAACAACTCCTGATGCCAAAG +
Preference number: 3 (lower is better)
Translates to: TLSCRTVGTRPA*MGWGKQLLMPK
Trigger: CTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTGCGACAGCTCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp CATAACCCTGAGCTGTCGCACTGTAGGGACACGGCCTaGATGCATGGGATGGGGCAAACAACTCCTGATGCC +
Preference number: 3 (lower is better)
Translates to: HNPELSHCRDTA*MHGMGQTTPDA
Trigger: GGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTGCGACAGCTCAGGGTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp TGTCGCACTGTAGGGACACGGCCTGCATGCATGGGATaGGGCAAACAACTCCTGATGCCAAAGCATTCGGCC +
Preference number: 3 (lower is better)
Translates to: CRTVGTRPACMG*GKQLLMPKHSA
Trigger: GGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTGCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 72 bp CACGGCCTGCATGCATGGGATGGGGCAAACAACTCCTaGTGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: HGLHAWDGANNS*CQSIRPQVRVF
Trigger: GAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp CTCCAGCCACCTCAATCTCCACAAAAGGACACACAATaGCTCGGCCATTCTTTGGCAGATGTCGGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: LQPPQSPQKDTQ*LGHSLADVGPP
Trigger: TGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CAA 90 bp TCAATCTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCGGCATCCCGCATGGTGCTaGGCTGCAGCACGTAGCCAC +
Preference number: 3 (lower is better)
Translates to: SISTKGHTMPRPFFGRCRHPAWC*AAARSH
Trigger: GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATG...CCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CAA 90 bp CATTGTCCACCACAAACTCTGTCTTCTGCTTGGTGCTGTCATACTCAGCTCCAGTGCCTCGGCCATTCTTaGGCAGATGTCGGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: HCPPQTLSSAWCCHTQLQCLGHS*ADVGPP
Trigger: TGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCA...CTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGTGGTGGACAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR TCA 72 bp CCCTGCCTTTTCTGCTCATGGCCACAGATACTCAACTaGGGTCAGAAACTGCTCCTGCCATCTTCCCGCAGG +
Preference number: 3 (lower is better)
Translates to: PCLFCSWPQILN*GQKLLLPSSRR
Trigger: CCTGCGGGAAGATGGCAGGAGCAGTTTCTGACCTCAGTTGAGTATCTGTGGCCATGAGCAGAAAAGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp GGCCACAGATACTCAACTGAGGTCAGAAACTGCTCCTaGCATCTTCCCGCAGGGCAGTCTTTAGTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: GHRYSTEVRNCS*HLPAGQSLVLW
Trigger: CCACAGGACTAAAGACTGCCCTGCGGGAAGATGGCAGGAGCAGTTTCTGACCTCAGTTGAGTATCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp GGCTCTGGTTGTTTCCAGCTCACCACCAAAACTGGCTaGCCACAAAGAACCCAGGCAGGATGTACTCTGCTC +
Preference number: 3 (lower is better)
Translates to: GSGCFQLTTKTG*PQRTQAGCTLL
Trigger: GAGCAGAGTACATCCTGCCTGGGTTCTTTGTGGCCAGCCAGTTTTGGTGGTGAGCTGGAAACAACCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp GCTCATGGCCACAGATACTCAACTGAGGTCAGAAACTaGTCCTGCCATCTTCCCGCAGGGCAGTCTTTAGTC +
Preference number: 3 (lower is better)
Translates to: AHGHRYSTEVRN*SCHLPAGQSLV
Trigger: GACTAAAGACTGCCCTGCGGGAAGATGGCAGGAGCAGTTTCTGACCTCAGTTGAGTATCTGTGGCCATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp AAGGGGCTCTGGTTGTTTCCAGCTCACCACCAAAACTaGCTGGCCACAAAGAACCCAGGCAGGATGTACTCT +
Preference number: 3 (lower is better)
Translates to: KGLWLFPAHHQN*LATKNPGRMYS
Trigger: AGAGTACATCCTGCCTGGGTTCTTTGTGGCCAGCCAGTTTTGGTGGTGAGCTGGAAACAACCAGAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp GCCCAGGTGAATTCCCACCCACCACCTTCTTGTGTATaGGAAAAAGCCACCCTCCTCTCTATGAACTGGGAC +
Preference number: 3 (lower is better)
Translates to: AQVNSHPPPSCV*EKATLLSMNWD
Trigger: GTCCCAGTTCATAGAGAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGGTGGGTGGGAATTCACCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp CTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTaGCAGATGTCGGGCCCCCAGCACCTCAATAGAGAT +
Preference number: 3 (lower is better)
Translates to: LHKRTHNASAIL*QMSGPQHLNRD
Trigger: ATCTCTATTGAGGTGCTGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CAA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGAACACAGTACAGTTTTaGCCTTCATCCAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVNTVQF*PSSRAG
Trigger: CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTT...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR-3UTR CAA 90 bp CTGGTGATGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTTCTGGTGAGGGGTTACAGCTCTaGCTGCTTAACCTGAGAAAT +
Preference number: 3 (lower is better)
Translates to: LVMAGEQGACKGAHLPSGEGLQL*LLNLRN
Trigger: ATTTCTCAGGTTAAGCAGCAAGAGCTGTAACCCCTC...ACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 72 bp TCTGGAAGTGGAAGGGCTTGGCTGGCCATACAGGGTTaGGTCCATTGTCCACCACAAACTCTGTCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: SGSGRAWLAIQG*VHCPPQTLSSA
Trigger: AGCAGAAGACAGAGTTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR TCA 72 bp ACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTaGTCTGGAAGTGGAAGGGCTTGGCTGGCCATACAG +
Preference number: 3 (lower is better)
Translates to: TPRSAERQIQGY*SGSGRAWLAIQ
Trigger: CTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR GCA 72 bp CAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTaGCCAGCTGTGGTTTTAAAGCTACAGGACAATGTA +
Preference number: 3 (lower is better)
Translates to: QGQTAGASSFSP*PAVVLKLQDNV
Trigger: TACATTGTCCTGTAGCTTTAAAACCACAGCTGGGCAGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR GCA 72 bp GGGTTGAGTCCATTGTCCACCACAAACTCTGTCTTCTaGTTGGTGCTGTCATACTCAGCTCCAGCCACCTCA +
Preference number: 3 (lower is better)
Translates to: GLSPLSTTNSVF*LVLSYSAPATS
Trigger: TGAGGTGGCTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGTGGTGGACAATGGACTCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR-3UTR CAA 90 bp GTCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCTTCATTCCTGAGCTCTaGCCTGCCCACAAATCTGAC +
Preference number: 3 (lower is better)
Translates to: VERLHLVVKLMGVQRASGFIPEL*PAHKSD
Trigger: GTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAA...GCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR TCA 72 bp GAGGCAAAGGCAATGTCTTACAGAGCCCAAGAGAGGTaGGCCTCAGGTCTACAAAGCTGCCTTAAGAAAGGC +
Preference number: 3 (lower is better)
Translates to: EAKAMSYRAQER*ASGLQSCLKKG
Trigger: GCCTTTCTTAAGGCAGCTTTGTAGACCTGAGGCTCACCTCTCTTGGGCTCTGTAAGACATTGCCTTTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 72 bp CTGAAGAGTTGGTCTTGGCAGGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACTCCAGGTCCTCACTGT +
Preference number: 3 (lower is better)
Translates to: LKSWSWQGKCQS*SAGRPTPGPHC
Trigger: ACAGTGAGGACCTGGAGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCCTGCCAAGACCAACTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR GCA 72 bp CTTTCAACTGTGTTGAAAGGGCCCAGAGATTTCAGCTaGCAAGTCCTAGAGGCAATCAGAATGGCACCTGGC +
Preference number: 3 (lower is better)
Translates to: LSTVLKGPRDFS*QVLEAIRMAPG
Trigger: GCCAGGTGCCATTCTGATTGCCTCTAGGACTTGGCAGCTGAAATCTCTGGGCCCTTTCAACACAGTTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp TTCAGGGTTACTGATCTGGAAGTGGAAGGGCTTGGCTaGCCATACAGGGTTGAGTCCATTGTCCACCACAAA +
Preference number: 3 (lower is better)
Translates to: FRVTDLEVEGLG*PYRVESIVHHK
Trigger: TTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CCA 72 bp CTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTaGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGT +
Preference number: 3 (lower is better)
Translates to: LGCEVNGSTESV*PWRGVESLLFG
Trigger: ACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR TCA 72 bp GAGCCAAAGCTGTTGAAAGTGAAAGGTCTGTCACTTTaGACCCAGTCTACTTGTCCCTGGTCTGTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: EPKLLKVKGLSL*TQSTCPWSVSQ
Trigger: CTGGCTGACAGACCAGGGACAAGTAGACTGGGTTCAAAGTGACAGACCTTTCACTTTCAACAGCTTTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp ATCTCATTAATGGCTTGGTTTCTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAA +
Preference number: 3 (lower is better)
Translates to: ISLMAWFLSSIH*WNPGFRLRDPE
Trigger: TTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAATGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 72 bp TGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTaGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: CEVNGSTESVWP*RGVESLLFGSS
Trigger: TGAAGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
3UTR GCA 72 bp AATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATaGAACAGGCTTTCCCTGCCCAGCTGTGGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: NHLATVSSEHVP*NRLSLPSCGFK
Trigger: TTTAAAACCACAGCTGGGCAGGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609257.5
3UTR TCA 72 bp GTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCTaGGCCCCCGAAAGAGCATACAAGTCAAAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: VSSEHVPCNRLS*APERAYKSKEK
Trigger: TTTTTCCTTTGACTTGTATGCTCTTTCGGGGGCTCAGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp GCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTaGGGCATGGAGGCCCAAAACAGTAATAACATCTCA +
Preference number: 3 (lower is better)
Translates to: AKHSTVFAFIQS*GMEAQNSNNIS
Trigger: TGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR TCA 72 bp CACATGGTGAGTGATGGGCTCAAGTTGAAAGACAAGTaGGTGTCTAGGTCCTTAGTGATGTTCAAGCTCTCA +
Preference number: 3 (lower is better)
Translates to: HMVSDGLKLKDK*VSRSLVMFKLS
Trigger: TGAGAGCTTGAACATCACTAAGGACCTAGACACTCACTTGTCTTTCAACTTGAGCCCATCACTCACCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 72 bp TATCCTGTCTTCAGGCCTTTTACTGGGAAAGTAGCCTaGGCCAGGAAATTCTGGTCACTAAACATGTCTTCC +
Preference number: 3 (lower is better)
Translates to: YPVFRPFTGKVA*ARKFWSLNMSS
Trigger: GGAAGACATGTTTAGTGACCAGAATTTCCTGGCTCAGGCTACTTTCCCAGTAAAAGGCCTGAAGACAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR GCA 72 bp AAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTaGTTAATGCGAAACACAGTACAGTTTTTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: KDPSPEVRARCV*LMRNTVQFLPS
Trigger: TGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR TCA 72 bp AGAAAGTCACACAAGAACCTGAGCACTATCGCTGTTTaGTACTGGCTATCATCAGTTCATGTCATCCACGGA +
Preference number: 3 (lower is better)
Translates to: RKSHKNLSTIAV*YWLSSVHVIHG
Trigger: TCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGCTCAGGTTCTTGTGTGACTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CCA 72 bp GAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGC +
Preference number: 3 (lower is better)
Translates to: EAQNSNNISLMA*FLSSIHCWNPG
Trigger: GCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CCA 72 bp GAAGAAGGCATGATCCTTTCATTCACCGAGTTAGTCTaGTGGGATAACCTGAACCTATTTGCTTTCTACCCA +
Preference number: 3 (lower is better)
Translates to: EEGMILSFTELV*WDNLNLFAFYP
Trigger: TGGGTAGAAAGCAAATAGGTTCAGGTTATCCCACCAGACTAACTCGGTGAATGAAAGGATCATGCCTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 72 bp GACTGTGAAGCTGTAAAAGAAAGTCACACAAGAACCTaGGCACTATCGCTGTTTGATACTGGCTATCATCAG +
Preference number: 3 (lower is better)
Translates to: DCEAVKESHTRT*ALSLFDTGYHQ
Trigger: CTGATGATAGCCAGTATCAAACAGCGATAGTGCTCAGGTTCTTGTGTGACTTTCTTTTACAGCTTCACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR TCA 72 bp ACCCTTGTTACTCATTTAAATCACCTTGAGAGGTTTTaGACAATACCTATGCTAAGGCCCCGGGTACCAGTA +
Preference number: 3 (lower is better)
Translates to: TLVTHLNHLERF*TIPMLRPRVPV
Trigger: TACTGGTACCCGGGGCCTTAGCATAGGTATTGTTCAAAACCTCTCAAGGTGATTTAAATGAGTAACAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp CTGAGAAATTTCCAGAAATTTCCTACCTGCTTCTACTaGAGAATAATCATCTGGCGACTGTTTCTAGTGAGC +
Preference number: 3 (lower is better)
Translates to: LRNFQKFPTCFY*RIIIWRLFLVS
Trigger: GCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAGAAGCAGGTAGGAAATTTCTGGAAATTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR GCA 72 bp CTGCTTAACCTGAGAAATTTCCAGAAATTTCCTACCTaGTTCTACTGCAGAATAATCATCTGGCGACTGTTT +
Preference number: 3 (lower is better)
Translates to: LLNLRNFQKFPT*FYCRIIIWRLF
Trigger: AAACAGTCGCCAGATGATTATTCTGCAGTAGAAGCAGGTAGGAAATTTCTGGAAATTTCTCAGGTTAAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTAGGCGCTCAGCGATGTaGCGCCCGTCACGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSRRSAM*RPSRPA
Trigger: GGCAGGGCGTGACGGGCGTCACATCGCTGAGCGCCT...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCTTGCGCCCACGGGCCTaGACCCCGGCCTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASGCETRKAATGGCFQRTLRPRA*TPASVL
Trigger: GAGGACAGAGGCCGGGGTCCAGGCCCGTGGGCGCAA...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGCGCCCCGGCTCCACGTaGTCTGGCGCGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGRPGST*SGASPA
Trigger: AGCTGGAGACGCGCCAGATCACGTGGAGCCGGGGCG...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGTCCCGGGCTCGGCCATaGAACAGCTGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWSRARP*NSWPEA
Trigger: TGCCTCAGGCCAGCTGTTTCATGGCCGAGCCCGGGA...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCACATCCAGGGACCAGTaGGCCACCGACGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFTSRDQ*ATDAML
Trigger: CAGCATGGCGTCGGTGGCCCACTGGTCCCTGGATGT...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCCACCGACGCCATGCTaGTGGAGAAGACGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFPPTPC*WRRRRA
Trigger: GGCTCTTCGTCTTCTCCATCAGCATGGCGTCGGTGG...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp AGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAATCCCGGGCTCGGCCATaGAACAGCTGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RLQAARPGRPPQGAASKESRARP*NSWPEA
Trigger: TGCCTCAGGCCAGCTGTTTCATGGCCGAGCCCGGGA...TTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCAAGGCGCACAGCACCTaGTGCTCTCCAACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFKAHST*CSPTRL
Trigger: CAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGCCTT...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp AGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAAGGCGCGTCTCCAGCTTaGCCTGGAAGGTCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RLQAARPGRPPQGAASKEGASPA*PGRSSA
Trigger: AGCGGAAGACCTTCCAGGTCAAGCTGGAGACGCGCC...TTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCTCCTGTGCCACTGGCTaGGGCAGCCTCTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ASGCETRKAATGGCFQRTSCATG*GSLSLQ
Trigger: TTGGAGAGAGAGGCTGCCTCAGCCAGTGGCACAGGA...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCCTCCTCGTAGGCACTaGCCTCAGCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ARPGRPPQGAASKEPSSRPPRRH*PQPASC
Trigger: ACAAGAAGCTGGCTGAGGGCAGTGCCTACGAGGAGG...CCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCCCAGCCCGCGGAGGCTaGTCTTGTCAAAGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: EGLIPHGAWLQHVATVPAPARGG*SCQRGR
Trigger: TCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGG...GGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGCCTTGGAGTCTCCTGTaGCACTGGCTGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWPWSLL*HWLRQP
Trigger: AGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGG...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGTGCTCTCGTGGGCGTTaGTCTGTGGGACAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWCSRGR*SVGQAL
Trigger: CAGAGCCTGTCCCACAGACCAACGCCCACGAGAGCA...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGGACCCGAGTCCTTCTTaGGGCCCTTCGTTCTCGACT +
Preference number: 4 (lower is better)
Translates to: ARPGRPPQGAASKEPSSRDPSPS*GPSFST
Trigger: AGTCGAGAACGAAGGGCCCCAAGAAGGACTCGGGTC...CCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CAA 72 bp GTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTaGCGCCCACGGGCCTGGACCCCGGCCTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VCAECWLCYEAP*RPRAWTPASVL
Trigger: GAGGACAGAGGCCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CAA 72 bp GAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTaGTCAAAGGGGTCGAAGGCCTCATCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: EMAHGSSPRRLL*SKGSKASSRMV
Trigger: CACCATGCGGGATGAGGCCTTCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGACACGGCAATGCTTaGTCTTGCCCTCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGGHGNA*SCPQPG
Trigger: TCCGGGCTGAGGGCAAGATCAAGCATTGCCGTGTCC...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCCAGTGCCTCCTCGTTaGTGGGATAGCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ASGCETRKAATGGCFQRTPVPPR*WDSAAS
Trigger: TGAAGCTGCGCTATCCCATCAACGAGGAGGCACTGG...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCGGCGGTTGTCTCCATTaGCCCGAGTCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFGGCLH*PESFLG
Trigger: CCCCAAGAAGGACTCGGGTCAATGGAGACAACCGCC...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTATCCAGGCTTCAGGCTaGGAGACCCGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPIQASG*ETRKAA
Trigger: GGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGAT...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCCCTACATTCCTCTaGCCTGGCTCCAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGGPTFL*PGSRAK
Trigger: TTTGGCCCTGGAGCCAGGGCAGAGGAATGTAGGGCC...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGGGCAATGTGCCCTTGTaGTGTGTCCTCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWGNVPL*CVLLLR
Trigger: CCTGAGGAGGAGGACACAGCACAAGGGCACATTGCC...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCCGGGCTTGTCAGGGGTCTaGAAGTTGAGGGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: RPHPAWCLAAARSHSACPGLSGV*KLRATS
Trigger: GCTTGTGGCCCTCAACTTCCAGACCCCTGACAAGCC...CGGGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGGTGGAAGGGCTTGGCTaGCCATACAGGGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWVEGLG*PYRVES
Trigger: GGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCAC...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGTCCCGGGCTCGGCCATaGAACAGCTGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLSRARP*NSWPEA
Trigger: TGCCTCAGGCCAGCTGTTTCATGGCCGAGCCCGGGA...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGATGCTGGCTATGCTATaGGGCACCTTTGCGCCCACG +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRMLAML*GTFAPT
Trigger: CGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCAT...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCATGTCCCCGCTGCGCTaGTCCAGGTCCGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLMSPLR*SRSVSR
Trigger: GCGGCTGACGGACCTGGAGCAGCGCAGCGGGGACAT...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCGGTGTCCGGGCATACTaGATCCAGCTGCGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFGVRAY*IQLRVP
Trigger: TGGAACTCGCAGCTGGATGCAGTATGCCCGGACACC...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTACTGTCTGGCCCTCTTaGTGGACACGGCAATGCTTG +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSTVWPS*WTRQCL
Trigger: CAAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGT...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CAAAGGGGTCGAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACCCTCATCCCGCATGGTaGTTGGCTGCAGCACGTAGC +
Preference number: 4 (lower is better)
Translates to: QRGRRPHPAWCLAAARSHPHPAW*LAAARS
Trigger: GCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGG...GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCATCCAGGCTTCAGGCTaGGAGACCCGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSIQASG*ETRKAA
Trigger: GGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGAT...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCGCTGAATGCTGGCTATaGTATGAGGCACCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFAECWL*YEAPLR
Trigger: GCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGC...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGACTCACTGGAGAACTaGTCCCCGGTCAGGTACGTG +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGDSLEN*SPVRYV
Trigger: CACGTACCTGACCGGGGACCAGTTCTCCAGTGAGTC...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGCCCATGGTAAATAACTaGCATCCCATCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWPMVNN*HPIRAV
Trigger: GACGGCCCGGATGGGATGCCAGTTATTTACCATGGG...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGTGGATACGGCAGTGCTaGACTTTCCCGTTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGWIRQC*TFPFRQ
Trigger: CTGGCGGAACGGGAAAGTCCAGCACTGCCGTATCCA...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGGCATCTTGCCGGGAGTaGATACGGCAGTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRASCRE*IRQCWT
Trigger: AGTCCAGCACTGCCGTATCCACTCCCGGCAAGATGC...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAAGCATCTTGCCGGGAGTaGATACGGCAGTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: RLQAARPGRPPQGAASKEASCRE*IRQCWT
Trigger: AGTCCAGCACTGCCGTATCCACTCCCGGCAAGATGC...TTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGCTGGTCAGGCTCGCGTaGTACCACTCTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGLVRLA*YHSLLS
Trigger: CGAGAGCAAAGAGTGGTACCACGCGAGCCTGACCAG...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCGTGGAAGGGCTTGGCTaGCCATACAGGGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: EGLIPHGAWLQHVATVPAVEGLG*PYRVES
Trigger: GGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCAC...GGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCTCTGCGAGATGCTCCTaGGAGATGCGGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ASGCETRKAATGGCFQRTSARCS*EMRKSS
Trigger: TGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGA...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTTTGCGCCCACGGGCCTaGACCCCGGCCTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCLRPRA*TPASVL
Trigger: GAGGACAGAGGCCGGGGTCCAGGCCCGTGGGCGCAA...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CAGATGTCGGGCCCCCAGCACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGTCTGTGCCAATCTCCTaGCGTCTGCTGTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QMSGPQHLNRDGTWLQPASVPIS*RLLSGP
Trigger: TGGCCCAGACAGCAGACGCCAGGAGATTGGCACAGA...CGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTGCTGGGGGCCCGACATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 72 bp TGTCAAAGGGGTCGAAGGCCTCATCCCGCATGGTGCTaGGCTGCAGCACGTAGCCACAGTGCCTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: CQRGRRPHPAWC*AAARSHSACPS
Trigger: TGACGGGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTTAAGCTGGTTGGGTaGGGGGAGCCCGTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLLKLVG*GEPVGR
Trigger: TCTGCCGACGGGCTCCCCTCACCCAACCAGCTTAAG...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTCCAGGGCCACGGGGTTaGCCATCTCTTCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPPGPRG*PSLPRS
Trigger: ACTACGTGGAAGAGATGGTCAACCCCGTGGCCCTGG...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCCAGGGCCACGGGGTTaGCCATCTCTTCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRPGPRG*PSLPRS
Trigger: ACTACGTGGAAGAGATGGTCAACCCCGTGGCCCTGG...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGTTGAGGGCCACAAGCTaGCTGCCACAGATCCACATG +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRLRATS*LPQIHM
Trigger: CATGTGGATCTGTGGCAGTCAGCTTGTGGCCCTCAA...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CAGATGTCGGGCCCCCAGCACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGTTGAGGGCCACAAGCTaGCTGCCACAGATCCACATG +
Preference number: 4 (lower is better)
Translates to: QMSGPQHLNRDGTWLQPALRATS*LPQIHM
Trigger: CATGTGGATCTGTGGCAGTCAGCTTGTGGCCCTCAA...CGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTGCTGGGGGCCCGACATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGGGCGGTTGTCTCCATTaGCCCGAGTCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRGGCLH*PESFLG
Trigger: CCCCAAGAAGGACTCGGGTCAATGGAGACAACCGCC...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGGGGGCAGAATGCCCCTaGCCTTGTAGGCTCTACTTT +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRGAECP*PCRLYF
Trigger: AAAGTAGAGCCTACAAGGTCAGGGGCATTCTGCCCC...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp ATCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTAGGCTGCGGCAGAGGTaGAGCACCTCGGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: IPCIFQAGSCSQPWAMCPRLRQR*STSASE
Trigger: CTCGGACGCCGAGGTGCTGCACCTCTGCCGCAGCCT...AGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGAGAGCCGGTTGTTCTTaGCCTCAGGACGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGRAGCS*PQDGWQ
Trigger: TTGCCATCCGTCCTGAGGGCAAGAACAACCGGCTCT...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCAGTGAGCCTGGCGTCTaGTGTCTGGGCCACTTCACG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRSEPGV*CLGHFT
Trigger: CGTGAAGTGGCCCAGACAGCAGACGCCAGGCTCACT...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGGCGCACAGCACCTGCTaGTCTCCAACGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVAHSTC*SPTRLG
Trigger: CCCCAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGC...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAATCCAGGCTTCAGGCTaGGAGACCCGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSIQASG*ETRKAA
Trigger: GGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGAT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCCTTGGAGTCTCCTGTaGCACTGGCTGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRPWSLL*HWLRQP
Trigger: AGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGG...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTAGGCAGGATGTACTCTaGTCAGACACACCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSRQDVL*SDTPSE
Trigger: CTCTGAGGGTGTGTCTGAGCAGAGTACATCCTGCCT...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCAGCAAGCACGTTCTGTaGCAATCTCCTGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: EGLIPHGAWLQHVATVPASKHVL*QSPGVC
Trigger: GCAGACGCCAGGAGATTGGCACAGAACGTGCTTGCT...GGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGCAGCCCTCAGAGTACTaGCTTCCAAGAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGQPSEY*LPRRGG
Trigger: ACCTCCCCTTCTTGGAAGCCAGTACTCTGAGGGCTG...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCGCCTCGGCCATTCTTTaGCAGATGTCGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSASAIL*QMSGPQ
Trigger: CTGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGC...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCTTCAGGCCTTTTACTaGGAAAGTAGCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFLQAFY*ESSLSQ
Trigger: CTGGCTCAGGCTACTTTCCCAGTAAAAGGCCTGAAG...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000609257.5
CDS-3UTR CCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCTCTCGACTGTCAAAATaGTCTGCGAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFSRLSK*SARCSW
Trigger: CCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGA...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATG +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRKGLRP*SWPHKM
Trigger: CATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTT...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGTCATGTTCCCAGCCATaGGCAATGTGCCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWSCSQP*AMCPCA
Trigger: AGCACAAGGGCACATTGCCCATGGCTGGGAACATGA...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGCAAACTGCCCGTAGGTaGTGTCCCCGCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVQTARR*CPRCAA
Trigger: AGCAGCGCAGCGGGGACATCACCTACGGGCAGTTTG...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCTCTGGGCGCTGTACATaGGGCTGCGGTACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSSGRCT*GCGTAE
Trigger: CTCAGCTGTACCGCAGCCTCATGTACAGCGCCCAGA...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGAGTGCCTGCCCGTCATaGAGAGGGCCTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRSACPS*RGPGSS
Trigger: AGATGAACCAGGCCCTCTTCATGACGGGCAGGCACT...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFGKCQS*SAGRPT
Trigger: AGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCC...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTCCACAGATACTCAACTaGGGTCAGAAACTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSPQILN*GQKLLL
Trigger: CAGGAGCAGTTTCTGACCTCAGTTGAGTATCTGTGG...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACTGAGCATGAACTCCTaGACCTGGAGGCGATCAACA +
Preference number: 4 (lower is better)
Translates to: RLQAARPGRPPQGAASKELSMNS*TWRRST
Trigger: TGTTGATCGCCTCCAGGTGCAGGAGTTCATGCTCAG...TTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCGAGTGGATACGGCAGTaGTGGACTTTCCCGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGREWIRQ*WTFPFR
Trigger: GCGGAACGGGAAAGTCCAGCACTGCCGTATCCACTC...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTGAGTGGATACGGCAGTaGTGGACTTTCCCGTTCCGC +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPEWIRQ*WTFPFR
Trigger: GCGGAACGGGAAAGTCCAGCACTGCCGTATCCACTC...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TGGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGGGGGTCCCAGCATCTTaGCGGGAGTGGATACGGCAG +
Preference number: 4 (lower is better)
Translates to: WSWPHKMEGSISRSQGQMGVPAS*REWIRQ
Trigger: CTGCCGTATCCACTCCCGGCAAGATGCTGGGACCCC...CATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCATAGAAGCCAGGGTTaGGTCCCTCATACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRHRSQG*VPHTGP
Trigger: GGGCCCTGTATGAGGGACGCAACCCTGGCTTCTATG...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGAAGGCGCACAGCACCTaGTGCTCTCCAACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLKAHST*CSPTRL
Trigger: CAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGCCTT...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGGCCGCCACAGGGGGCTaGTTCCAAAGAACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLAATGG*FQRTQF
Trigger: GAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGC...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTGTCAGAAACTGCTCCTaGCATCTTCCCGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPVRNCS*HLPAGQ
Trigger: CTGCCCTGCGGGAAGATGGCAGGAGCAGTTTCTGAC...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTCTTCATCCTCAGATGTaGCTTGCAGGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSLHPQM*LAGSAF
Trigger: AAACGCTGAGCCTGCAAGCCACATCTGAGGATGAAG...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCCAAGGAGGACTCACTaGAGAACTGGTCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRPRRTH*RTGPRS
Trigger: TGACCGGGGACCAGTTCTCCAGTGAGTCCTCCTTGG...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCAGATGGCATATGAGTTaGGTTCATTCCGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFRWHMS*VHSASA
Trigger: TGCGGAAGCGGAATGAACCCAACTCATATGCCATCT...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCACATCCAGGGACCAGTaGGCCACCGACGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLTSRDQ*ATDAML
Trigger: CAGCATGGCGTCGGTGGCCCACTGGTCCCTGGATGT...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGGCAAAGGATCGTAGTTaGAGGAATCCAGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRAKDRS*RNPVAG
Trigger: GCCAGCGACTGGATTCCTCCAACTACGATCCTTTGC...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCTGCCACAGATCCACATaGGCAAAGGATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: ASGCETRKAATGGCFQRTCHRST*AKDRSW
Trigger: CCAACTACGATCCTTTGCCCATGTGGATCTGTGGCA...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCGGCTTGTCAGGGGTCTaGAAGTTGAGGGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRGLSGV*KLRATS
Trigger: GCTTGTGGCCCTCAACTTCCAGACCCCTGACAAGCC...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGACTCTGTCTTCTGCTTaGTGCTGTCATACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ARPGRPPQGAASKEPSSRTLSSA*CCHTQL
Trigger: GAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGT...CCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTCTTCAGGCCTTTTACTaGGAAAGTAGCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSLQAFY*ESSLSQ
Trigger: CTGGCTCAGGCTACTTTCCCAGTAAAAGGCCTGAAG...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000609257.5
CDS-3UTR TCA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCACGATTCCGATCCACTaGGTAAAACTGCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFTIPIH*VKLLPE
Trigger: CTCCGGAAGCAGTTTTACTCAGTGGATCGGAATCGT...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCGAAAGAGATGGCATATaGGTTGGGTTCATTCCGCTT +
Preference number: 4 (lower is better)
Translates to: GIQASGCETRKAATGGCFERDGI*VGFIPL
Trigger: AAGCGGAATGAACCCAACTCATATGCCATCTCTTTC...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGGACGGATGGCAATCTaGCAAGCCGGCACATCCAAG +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTGRMAI*QAGTSK
Trigger: CTTGGATGTGCCGGCTTGTCAGATTGCCATCCGTCC...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp AGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAATTGGTTCTTCATTCCTaGGCTCTTGCCTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: RLQAARPGRPPQGAASKELVLHS*ALACPQ
Trigger: TTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAA...TTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAGCCACCTCTCAATCTaGAGGGGTGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSSHLSI*RGVGAC
Trigger: GCAGGCACCCACACCCCTGCAGATTGAGAGGTGGCT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTAGTTGGCATAGGGTTTaGCTCTACATAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSSWHRV*LYIEAR
Trigger: CCTGGCTTCTATGTAGAGGCAAACCCTATGCCAACT...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGCCAGCCCGCGGAGGCTaGTCTTGTCAAAGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRPARGG*SCQRGR
Trigger: TCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGG...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGGATGCTCCTGGGAGATaGGGAAGTCCTCAAACGGCT +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRDAPGR*GSPQTA
Trigger: AGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATC...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAAGGCGCACAGCACCTaGTGCTCTCCAACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSKAHST*CSPTRL
Trigger: CAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGCCTT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ACACGCCAAGGACGTCCTAACCAACGTGGATGGGCCCTAACAGAAGGGCCTACAGCCGCCACAGGGGGCTaGTTCCAAAGAACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TRQGRPNQRGWALTEGPTAATGG*FQRTQF
Trigger: GAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGC...TGTAGGCCCTTCTGTTAGGGCCCATCCACGTTGGTTAGGACGTCCTTGGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTACACAGTACAGTTTTTaGCTTCATCCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSTQYSF*LHPELG
Trigger: CCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGT...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TGGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGAGCAGGCAGCCCACCTaGCACTCTCCTCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: WSWPHKMEGSISRSQGQMSRQPT*HSPLQG
Trigger: ACCTTGGAGAGGAGAGTGGCAGGTGGGCTGCCTGCT...CATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTCGGCTCCACGTGATCTaGCGCGTCTCCAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALRLHVI*RVSSLT
Trigger: GGTCAAGCTGGAGACGCGCCAGATCACGTGGAGCCG...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGACAAAGCAATGTGACTaGTCCGGCCGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRTKQCD*SGRKAG
Trigger: CCCAGCTTTCCGGCCGGACCAGTCACATTGCTTTGT...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGATCTTCCTCTTAAGCTaGTTGGGTGAGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRIFLLS*LGEGSP
Trigger: CGGGCTCCCCTCACCCAACCAGCTTAAGAGGAAGAT...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGTGGGGATACCATTCGTaGTTCACAGGGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRWGYHS*FTGSSR
Trigger: CCTGGAGGACCCTGTGAACCACGAATGGTATCCCCA...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TGGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGCTCTCGTGGGCGTTaGTCTGTGGGACAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WSWPHKMEGSISRSQGQMCSRGR*SVGQAL
Trigger: CAGAGCCTGTCCCACAGACCAACGCCCACGAGAGCA...CATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAGGCCTCATCCCGCATaGTGCTTGGCTGCAGCACGT +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSRPHPA*CLAAAR
Trigger: ACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCAGGCCTCATCCCGCATaGTGCTTGGCTGCAGCACGT +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLRPHPA*CLAAAR
Trigger: ACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCT...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCGGGCCCCAGGCCTCATCCCGCATaGTGCTTGGCTGCAGCACGT +
Preference number: 4 (lower is better)
Translates to: LHKRTHNASAILWQMSGPRPHPA*CLAAAR
Trigger: ACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCT...GGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACACTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTLRPWS*PHKMEG
Trigger: TCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAG...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATG +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVKGLRP*SWPHKM
Trigger: CATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTT...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCAAGCTGCAGCAAGGATaGCAGCTTCATTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFKLQQG*QLHSAP
Trigger: AGGTGCTGAATGAAGCTGCCATCCTTGCTGCAGCTT...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCAAACTGCCCGTAGGTaGTGTCCCCGCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDQTARR*CPRCAA
Trigger: AGCAGCGCAGCGGGGACATCACCTACGGGCAGTTTG...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACACCTCAATGGACAGGATaGCTGGGTACTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTPQWTG*LGTLRP
Trigger: TGGCCTCAGAGTACCCAGTCATCCTGTCCATTGAGG...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTGGACACGGCAATGCTTaGTCTTGCCCTCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSGHGNA*SCPQPG
Trigger: TCCGGGCTGAGGGCAAGATCAAGCATTGCCGTGTCC...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGCAGGGGTCTGGAAGTTaGGGGCCACAAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRQGSGS*GPQADC
Trigger: GCAGTCAGCTTGTGGCCCTCAACTTCCAGACCCCTG...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTCAGGGGTCTGGAAGTTaGGGGCCACAAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCQGSGS*GPQADC
Trigger: GCAGTCAGCTTGTGGCCCTCAACTTCCAGACCCCTG...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp AAGAGGGCCTGGTTCATCTGCATAGGCTTGTCAGGGGTCTGGAAGTTGAGGGCCAGTGCCTGCCCGTCATaGAGAGGGCCTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: KRAWFICIGLSGVWKLRASACPS*RGPGSS
Trigger: AGATGAACCAGGCCCTCTTCATGACGGGCAGGCACT...GGCCCTCAACTTCCAGACCCCTGACAAGCCTATGCAGATGAACCAGGCCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGTGCAACAGGCTTTCCTaGGCCCCCGAAAGAGCATAC +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLCNRLS*APERAY
Trigger: GTATGCTCTTTCGGGGGCTCAGGAAAGCCTGTTGCA...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp GCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGAAGTTGAAAGACAAGTaGGTGTCTAGGTCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: ARPGRPPQGAASKEPSSRKLKDK*VSRSLV
Trigger: CACTAAGGACCTAGACACTCACTTGTCTTTCAACTT...CCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAGGTGTCCGGGCATACTaGATCCAGCTGCGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSGVRAY*IQLRVP
Trigger: TGGAACTCGCAGCTGGATGCAGTATGCCCGGACACC...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGTGCTCCTTGATGGTGTaGAGGACATCTGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGCSLMV*RTSENL
Trigger: CAAGTTCTCAGATGTCCTGCACACCATCAAGGAGCA...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTTCTGCTGGGCAATGCTaGAGTGGTCCTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPSAGQC*SGPQWT
Trigger: TGTCCATTGAGGACCACTGCAGCATTGCCCAGCAGA...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCTTCTCTGCTGGGCAATaGTGCAGTGGTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRFSAGQ*CSGPQW
Trigger: CCATTGAGGACCACTGCAGCATTGCCCAGCAGAGAA...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCCGTGGTACCACTCTTTaGTCTCGTGGGCGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSRGTTL*SRGRWS
Trigger: AGACCAACGCCCACGAGAGCAAAGAGTGGTACCACG...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTCATGTGCTCAGCCTGTaGTCTGGTCAGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCHVLSL*SGQARV
Trigger: CACGCGAGCCTGACCAGAGCACAGGCTGAGCACATG...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTAGTGAGCCTGGCGTCTaGTGTCTGGGCCACTTCACG +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSSEPGV*CLGHFT
Trigger: CGTGAAGTGGCCCAGACAGCAGACGCCAGGCTCACT...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGAGGGCCTGGTTCATCTaGATAGGCTTGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLRAWFI*IGLSGV
Trigger: GACCCCTGACAAGCCTATGCAGATGAACCAGGCCCT...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGCAAAAGGACACACAATaGCTCGGCCATTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRQKDTQ*LGHSLA
Trigger: TGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTG...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGCAAAAGGACACACAATaGCTCGGCCATTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGQKDTQ*LGHSLA
Trigger: TGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTG...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGAAATGGTCTGCGAGATaGTCCTGGGAGATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRKWSAR*SWEMRK
Trigger: CTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTT...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGATCCAGGCTTCAGGCTaGGAGACCCGGAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SCLPTNLTSLNGDAVLQQIQASG*ETRKAA
Trigger: GGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGAT...CTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCAGGGCCAGATGTGTGTaGTTAATGCGAAACACAGTA +
Preference number: 4 (lower is better)
Translates to: ASGCETRKAATGGCFQRTRARCV*LMRNTV
Trigger: TACTGTGTTTCGCATTAAGCACACACATCTGGCCCT...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTAGCAGGCAGCCCACCTaGCACTCTCCTCTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCSRQPT*HSPLQG
Trigger: ACCTTGGAGAGGAGAGTGGCAGGTGGGCTGCCTGCT...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTCCTGATGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTCCCCACCAACAAACACGGCTCCACGTGATCTaGCGCGTCTCCAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: LLMPKHSAPSKGLPHQQTRLHVI*RVSSLT
Trigger: GGTCAAGCTGGAGACGCGCCAGATCACGTGGAGCCG...TGTTTGTTGGTGGGGAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTTGCCCTGGTCACTGCTaGTCTCCTCAGAGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPCPGHC*SPQSSR
Trigger: TCTACTACTCTGAGGAGACCAGCAGTGACCAGGGCA...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCGCTCAGCCTGTGCTCTaGTCAGGCTCGCGTGGTACC +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETAQPVL*SGSRGT
Trigger: GGTACCACGCGAGCCTGACCAGAGCACAGGCTGAGC...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCCAGCCCGGAAAGAGATaGCATATGAGTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFQPGKR*HMSWVH
Trigger: ATGAACCCAACTCATATGCCATCTCTTTCCGGGCTG...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTGGTGATGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTTCTGGTCCTAGCATCACTGTCTaGCCCTCTTGCTGGACACGG +
Preference number: 4 (lower is better)
Translates to: LVMAGEQGACKGAHLPSGPSITV*PSCWTR
Trigger: CCGTGTCCAGCAAGAGGGCCAGACAGTGATGCTAGG...ACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCATCCCGCATGGTGCTTaGCTGCAGCACGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLIPHGA*LQHVAT
Trigger: TGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGAT...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAATAGAGATGGCACATaGCTCCAGCCCGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSNRDGT*LQPAEA
Trigger: AGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCGGGCCCCAATAGAGATGGCACATaGCTCCAGCCCGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHKRTHNASAILWQMSGPNRDGT*LQPAEA
Trigger: AGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATT...GGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp TTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCGCCTCGGCCATTCTTTaGCAGATGTCGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: FLSSCLPTNLTSLNGDAVASAIL*QMSGPQ
Trigger: CTGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGC...GACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCACACCCTCAGAGGGTaGGCAGGAGAGAGTGGACCC +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDHTLRG*AGESGP
Trigger: GGGTCCACTCTCTCCTGCCCACCCTCTGAGGGTGTG...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGGCGATCAAAGTCCCGTaGGGTCTTCCCTGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVAIKVP*GLPWAD
Trigger: ATCCGCCCAGGGAAGACCTCACGGGACTTTGATCGC...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTTGGGGACCCGGTAGTTaGCCTGGGACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSWGPGS*PGTACS
Trigger: AGAACATGCTGTCCCAGGTCAACTACCGGGTCCCCA...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGGATGACTGGGTACTCTaGGGCCACAAAGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVDDWVL*GHKGML
Trigger: GAGCATGCCTTTGTGGCCTCAGAGTACCCAGTCATC...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CTGGTGATGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTTCTGGTGATGACTGGGTACTCTaGGGCCACAAAGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: LVMAGEQGACKGAHLPSGDDWVL*GHKGML
Trigger: GAGCATGCCTTTGTGGCCTCAGAGTACCCAGTCATC...ACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGACTTAAGCTGGTTGGGTaGGGGGAGCCCGTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRLKLVG*GEPVGR
Trigger: TCTGCCGACGGGCTCCCCTCACCCAACCAGCTTAAG...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGGCGCTCAGCGATGTaGCGCCCGTCACGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VIFVPSQHSQLWKQSFRKRRSAM*RPSRPA
Trigger: GGCAGGGCGTGACGGGCGTCACATCGCTGAGCGCCT...CTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGTGCAGTCGATTGTACTaGAGGAACTTCTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGCSRLY*RNFLPL
Trigger: CAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCA...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GTCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCGGCGGTTGTCTCCATTaGCCCGAGTCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VERLHLVVKLMGVQRASGGGCLH*PESFLG
Trigger: CCCCAAGAAGGACTCGGGTCAATGGAGACAACCGCC...GCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR TCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCTCCTGTGCCACTGGCTaGGGCAGCCTCTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETSCATG*GSLSLQ
Trigger: TTGGAGAGAGAGGCTGCCTCAGCCAGTGGCACAGGA...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCCACCCTCCTCTCTATaGACTGGGACTGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLPPSSL*TGTVKL
Trigger: CAGCTTCACAGTCCCAGTTCATAGAGAGGAGGGTGG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGACCTTCTGGTACCACTaGCTTCCCTCTCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVTFWYH*LPSPGP
Trigger: AGGGCCGGGAGAGGGAAGTCAGTGGTACCAGAAGGT...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTAGAAGGTTCTACTGGTaGTGGCAGGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPRRFYW*WQENKE
Trigger: CTCCTTGTTCTCCTGCCATCACCAGTAGAACCTTCT...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGGAGGCCACAAAGGCATaGTCCTTGATGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVEATKA*SLMVCR
Trigger: CCTGCACACCATCAAGGAGCATGCCTTTGTGGCCTC...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAACGCGCATTAGCATGTaGTCAGCCTGTGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSTRISM*SACALV
Trigger: GACCAGAGCACAGGCTGAGCACATGCTAATGCGCGT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTGGTGATGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTTCTGGTACGCGCATTAGCATGTaGTCAGCCTGTGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVMAGEQGACKGAHLPSGTRISM*SACALV
Trigger: GACCAGAGCACAGGCTGAGCACATGCTAATGCGCGT...ACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTAGCAAGCACGTTCTGTaGCAATCTTCTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSSKHVL*QSSLHQ
Trigger: TTGATGAAGAGAAGATTGGCACAGAACGTGCTTGCT...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTGGGCCACAAGCTGACTaGCACAGATCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSGPQAD*HRSTWA
Trigger: TGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCCC...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAGGGCCTGGTTCATCTaGATAGGCTTGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSRAWFI*IGLSGV
Trigger: GACCCCTGACAAGCCTATGCAGATGAACCAGGCCCT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGGTTCTTCAAAGGCACTaGTCTGTATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRVLQRH*SVSCLQ
Trigger: CTGAAGACAGGATACAGAGCAGTGCCTTTGAAGAAC...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCAGGGCCAGATGTGTGTaGTTAATGCGAAACACAGTA +
Preference number: 4 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFRARCV*LMRNTV
Trigger: TACTGTGTTTCGCATTAAGCACACACATCTGGCCCT...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGCCTTGGAGTCTCCTGTaGCACTGGCTGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVPWSLL*HWLRQP
Trigger: AGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGG...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCAGCTATGAGGCACCTTTaGGCCCACGGGCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPAMRHL*AHGPGP
Trigger: GGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGC...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCTGAATGCTGGCTATaGTATGAGGCACCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTAECWL*YEAPLR
Trigger: GCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGC...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTAACAGAGAAGTTTCCTaGCCAGCTGTGGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: QAARPGRPPQGAASKEPSNREVS*PAVVLK
Trigger: CTTTAAAACCACAGCTGGGCAGGAAACTTCTCTGTT...ACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCTTGGTCTGCTTCTACTaGAGAATAATCATCTGGCGA +
Preference number: 4 (lower is better)
Translates to: ASGCETRKAATGGCFQRTLVCFY*RIIIWR
Trigger: TCGCCAGATGATTATTCTGCAGTAGAAGCAGACCAA...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS-3UTR CCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTGTCCGGCCGGAAAGCTaGGTCCTCTTGATAGCGATC +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCVRPES*VLLIAI
Trigger: GATCGCTATCAAGAGGACCCAGCTTTCCGGCCGGAC...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCTTCATCCTCAGATGTaGCTTGCAGGCTCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRLHPQM*LAGSAF
Trigger: AAACGCTGAGCCTGCAAGCCACATCTGAGGATGAAG...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCCAATCTGCAGGGGTGTaGGTGCCTGCAATGTATCCT +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSQSAGV*VPAMYP
Trigger: AGGATACATTGCAGGCACCCACACCCCTGCAGATTG...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTGTTCTTCAGGTCCTTaGCTGATATACGATCCTCAC +
Preference number: 4 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFCSSGP*LIYDPH
Trigger: GTGAGGATCGTATATCAGCCAAGGACCTGAAGAACA...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGAGGTCCATCGTCTTCTaGGCGCTGTACATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVRSIVF*ALYMRL
Trigger: CAGCCTCATGTACAGCGCCCAGAAGACGATGGACCT...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACAGCCCTCAGAGTACTaGCTTCCAAGAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSQPSEY*LPRRGG
Trigger: ACCTCCCCTTCTTGGAAGCCAGTACTCTGAGGGCTG...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGAGTAGATCTTGCTGCTaGTCAGAACAAAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: FTAGIQASGCETRKAATGSRSCC*SEQSSG
Trigger: CCCACTACTTTGTTCTGACCAGCAGCAAGATCTACT...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCGTGGAAGGGCTTGGCTaGCCATACAGGGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: EVNGSTESVWPWRGVESLVEGLG*PYRVES
Trigger: GGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCAC...GAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTTCTCGACTGTCAAAATaGTCTGCGAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPSRLSK*SARCSW
Trigger: CCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGA...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCTCTAGCATTCACTGCTaGAATCCAGGCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRSSIHC*NPGFRL
Trigger: CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTCTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCLRPWS*PHKMEG
Trigger: TCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAG...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGATGTCAGTAGCTCCTTaGAGTCTCCTGTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLMSVAP*SLLCHW
Trigger: CCAGTGGCACAGGAGACTCCAAGGAGCTACTGACAT...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTCTGTATCTTTCAGGCTaGGTCATGTTCCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPLYLSG*VMFPAM
Trigger: CATGGCTGGGAACATGACCCAGCCTGAAAGATACAG...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTAAGCTGCAGCAAGGATaGCAGCTTCATTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPKLQQG*QLHSAP
Trigger: AGGTGCTGAATGAAGCTGCCATCCTTGCTGCAGCTT...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTGTGTGTGCTGAATGCTaGCTATGCTATGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPVCAEC*LCYEAP
Trigger: AGGTGCCTCATAGCATAGCCAGCATTCAGCACACAC...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCCTGCATGCATGGGATaGGGCAAACAACTCCTGATG +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLPACMG*GKQLLM
Trigger: CATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGG...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTCAGTCTTTAGTCCTGTaGCGGGGGCAGAATGCCCCT +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSQSLVL*RGQNAP
Trigger: AGGGGCATTCTGCCCCCGCCACAGGACTAAAGACTG...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCTGTTCAAGATGTGCTTaGTCAGGAGGCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSCSRCA*SGGRPL
Trigger: CAGGGGTCTGCCTCCTGACCAAGCACATCTTGAACA...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTGAGAGCGTCTGGCCTTaGAGAGGGGTTGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RASALGCEVNGSTESVWPESVWP*RGVESL
Trigger: GAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTC...AGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR CCA 90 bp CACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGGAGAGCGTCTGGCCTTaGAGAGGGGTTGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: HLVVKLMGVQRASGLGEGESVWP*RGVESL
Trigger: GAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTC...CCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR CCA 90 bp CTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCGGGCCCCGAGCCCTGCATGCACTaGCTGAAGAGTTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LHKRTHNASAILWQMSGPEPCMH*LKSWSW
Trigger: CCAAGACCAACTCTTCAGCCAGTGCATGCAGGGCTC...GGGGCCCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 72 bp TCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTaGGAGTCTCCTGTGCCACTGGCTGAGGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSSSTLRNVSSS*ESPVPLAEAAS
Trigger: AGAGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp ACACGCCAAGGACGTCCTAACCAACGTGGATGGGCCCTAACAGAAGGGCCTACAAATGACAAAGCAATGTaGCTGGTCCGGCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TRQGRPNQRGWALTEGPTNDKAM*LVRPES
Trigger: GCTTTCCGGCCGGACCAGTCACATTGCTTTGTCATT...TGTAGGCCCTTCTGTTAGGGCCCATCCACGTTGGTTAGGACGTCCTTGGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCAAAGGCATGCTCCTTaGTGGTGTGCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLQRHAP*WCAGHL
Trigger: CAGATGTCCTGCACACCATCAAGGAGCATGCCTTTG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCTGTGGGACAGGCTCTaGAAGTCGCATCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLLWDRL*KSHLKL
Trigger: GAGTTTGAGATGCGACTTTCAGAGCCTGTCCCACAG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGACCACCGACGCCATGCTaGTGGAGAAGACGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRPPTPC*WRRRRA
Trigger: GGCTCTTCGTCTTCTCCATCAGCATGGCGTCGGTGG...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CAAAGGGGTCGAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACTGCAGTCGATTGTACTaGAGGAACTTCTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QRGRRPHPAWCLAAARSHCSRLY*RNFLPL
Trigger: CAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCA...GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTCGACCCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp GCTTGGTGCTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAGGGGTCTGGAAGTTaGGGGCCACAAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: AWCCHTQLQPPQSPQKDTQGSGS*GPQADC
Trigger: GCAGTCAGCTTGTGGCCCTCAACTTCCAGACCCCTG...TGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAGCACCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCTGGCCATACAGGGTTaGGTCCATTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLLAIQG*VHCPPQ
Trigger: TTGTGGTGGACAATGGACTCAACCCTGTATGGCCAG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCCTGCATGCACTGGCTaGAGAGTTGGTCGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: FLSSCLPTNLTSLNGDAVPACTG*RVGRAS
Trigger: AGACGCTCGACCAACTCTTCAGCCAGTGCATGCAGG...GACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR TCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCCTGCATGCACTGGCTaGAGAGTTGGTCTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLPACTG*RVGLLL
Trigger: TAGAAGCAGACCAACTCTTCAGCCAGTGCATGCAGG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS-3UTR GCA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCAGGCTGCGGCAGAGGTaGAGCACCTCGGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFIRLRQR*STSASE
Trigger: CTCGGACGCCGAGGTGCTGCACCTCTGCCGCAGCCT...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTCGTGGTACCACTCTTTaGTCTCGTGGGCGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCRGTTL*SRGRWS
Trigger: AGACCAACGCCCACGAGAGCAAAGAGTGGTACCACG...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTACTGTCTGGCCCTCTTaGTGGACACGGCAATGCTTG +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSTVWPS*WTRQCL
Trigger: CAAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGT...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAGTCAGGCTCAGCTGTaGCAATCTTCTCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSSQAQL*QSSPVP
Trigger: AGGCACTGGAGAAGATTGGCACAGCTGAGCCTGACT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGAGCAAGCACGTTCTGTaGCAATCTTCTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRSKHVL*QSSLHQ
Trigger: TTGATGAAGAGAAGATTGGCACAGAACGTGCTTGCT...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCAAATGGTCTGCGAGATaGTCCTGGGAGATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLKWSAR*SWEMRK
Trigger: CTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTT...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCGCGCACAGCACCTGCTaGTCTCCAACGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGVIFVPSQHSQLWKQSFAHSTC*SPTRLG
Trigger: CCCCAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGC...GAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TGGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGCAGAACCCTTCTCCATaGAGGCCCTACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WSWPHKMEGSISRSQGQMQNPSP*RPYIPL
Trigger: CAGAGGAATGTAGGGCCTGCATGGAGAAGGGTTCTG...CATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTCCTGATGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTCCCCACCAACAAACAGGCAATGTGCCCTTGTaGTGTGTCCTCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLMPKHSAPSKGLPHQQTGNVPL*CVLLLR
Trigger: CCTGAGGAGGAGGACACAGCACAAGGGCACATTGCC...TGTTTGTTGGTGGGGAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTCATTCAGCACCTAACTaGCTGTACCCCACCCACCCA +
Preference number: 4 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALHSAPN*LYPTHP
Trigger: TGGGTGGGTGGGGTACAGGCAGTTAGGTGCTGAATG...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CACTGTAGGGACACGGCCTGCATGCATGGGATGGGGCAAACAACTCCTGATGCCGTGATGTTCAAGATGTaGTTGGTCAGGAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: HCRDTACMHGMGQTTPDAVMFKM*LVRRQT
Trigger: GGTCTGCCTCCTGACCAAGCACATCTTGAACATCAC...GGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGCCAAGTCCCTGGCGTCTaGTGTCTGGGCCACTTCACG +
Preference number: 4 (lower is better)
Translates to: CSIPAQPTMETELQEEKGQVPGV*CLGHFT
Trigger: CGTGAAGTGGCCCAGACAGCAGACGCCAGGGACTTG...GCCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612731.2
CDS-3UTR GCA 90 bp ACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTCGGCCATCAATCTCCTGGCGTCTaGTGTCTGGGCCACTTCACG +
Preference number: 4 (lower is better)
Translates to: TQLQPPQSPQKDTQCLGHQSPGV*CLGHFT
Trigger: CGTGAAGTGGCCCAGACAGCAGACGCCAGGAGATTG...ATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp ATCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTACAAAGCAATGTGACTaGTCCGGCCGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IPCIFQAGSCSQPWAMCPTKQCD*SGRKAG
Trigger: CCCAGCTTTCCGGCCGGACCAGTCACATTGCTTTGT...AGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGCCAAGGAGGACTCACTaGAGAACTGGTCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVPRRTH*RTGPRS
Trigger: TGACCGGGGACCAGTTCTCCAGTGAGTCCTCCTTGG...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCATGCATGGGATGGGGCAAACAACTCCTGATGCCAAAGCATTCGGCCCCAAGTGCCATGTTTCTCTGCTaGGCAATGCTGCAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ACMGWGKQLLMPKHSAPSAMFLC*AMLQWS
Trigger: GGACCACTGCAGCATTGCCCAGCAGAGAAACATGGC...ACTTGGGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp ATCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGGGGATACCATTCGTaGTTCACAGGGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IPCIFQAGSCSQPWAMCPWGYHS*FTGSSR
Trigger: CCTGGAGGACCCTGTGAACCACGAATGGTATCCCCA...AGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTCCTGATGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTCCCCACCAACAAACATGGATACGGCAGTGCTaGACTTTCCCGTTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LLMPKHSAPSKGLPHQQTWIRQC*TFPFRQ
Trigger: CTGGCGGAACGGGAAAGTCCAGCACTGCCGTATCCA...TGTTTGTTGGTGGGGAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGCTGGTCAGGCTCGCGTaGTACCACTCTTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVLVRLA*YHSLLS
Trigger: CGAGAGCAAAGAGTGGTACCACGCGAGCCTGACCAG...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCAATCTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCGGCCAGTCGCTGGCCCTTaGGGTAGATGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SISTKGHTMPRPFFGRCRPVAGP*GRCGRA
Trigger: AGCTCTCCCGCATCTACCCCAAGGGCCAGCGACTGG...CCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp CACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAAGCAAAGGATCGTAGTTaGAGGAATCCAGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HLNRDGTWLQPAEAALVKAKDRS*RNPVAG
Trigger: GCCAGCGACTGGATTCCTCCAACTACGATCCTTTGC...TTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp TTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCGGCTTGTCAGGGGTCTaGAAGTTGAGGGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: FLSSCLPTNLTSLNGDAVGLSGV*KLRATS
Trigger: GCTTGTGGCCCTCAACTTCCAGACCCCTGACAAGCC...GACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGATCCCGCATGGTGCTTaGCTGCAGCACGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVIPHGA*LQHVAT
Trigger: TGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGAT...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTAGGCCTCATCCCGCATaGTGCTTGGCTGCAGCACGT +
Preference number: 4 (lower is better)
Translates to: ERLHLVVKLMGVQRASGLRPHPA*CLAAAR
Trigger: ACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCT...AAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp GTCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCAATAGAGATGGCACATaGCTCCAGCCCGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VERLHLVVKLMGVQRASGNRDGT*LQPAEA
Trigger: AGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATT...GCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp TGCTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCGCCTCGGCCATTCTTTaGCAGATGTCGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: CCHTQLQPPQSPQKDTQCASAIL*QMSGPQ
Trigger: CTGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGC...GCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGGACCCGAGTCCTTCTTaGGGCCCTTCGTTCTCGACT +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVDPSPS*GPSFST
Trigger: AGTCGAGAACGAAGGGCCCCAAGAAGGACTCGGGTC...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATG +
Preference number: 4 (lower is better)
Translates to: ERLHLVVKLMGVQRASGLKGLRP*SWPHKM
Trigger: CATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTT...AAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACAGTCTCCTGTGCCACTaGCTGAGGCAGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDSLLCH*LRQPLS
Trigger: AGAGAGAGGCTGCCTCAGCCAGTGGCACAGGAGACT...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGGAGCCCTGCATGCACTaGCTGAAGAGTTGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: ASALGCEVNGSTESVWPWEPCMH*LKSWSS
Trigger: GCTCGACCAACTCTTCAGCCAGTGCATGCAGGGCTC...CCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR TCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGTCTCCACGGGCTTGGTaGGGAGTGTGTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMSPRAW*GVCPPA
Trigger: TGCTGGGGGACACACTCCTCACCAAGCCCGTGGAGA...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GCACTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGTCTCCACGGGCTTGGTaGGGAGTGTGTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ALSLFDTGYHQFMSSTEPSPRAW*GVCPPA
Trigger: TGCTGGGGGACACACTCCTCACCAAGCCCGTGGAGA...CGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGCTCTTCCACGTAGTTTaGTGGGAACCACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVLFHVV*WEPQLL
Trigger: AAGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAG...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GGCCACAAGCTGACTGCCACAGATCCACATGGGCAAAGGATCGTAGTTGGAGGACTGGCCATACAGGGTTaGGTCCATTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: GHKLTATDPHGQRIVVGGLAIQG*VHCPPQ
Trigger: TTGTGGTGGACAATGGACTCAACCCTGTATGGCCAG...TCCTCCAACTACGATCCTTTGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAACTGGGAAAGTAGCCTaGGCCAGGAAATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSTGKVA*ARKFWS
Trigger: TGACCAGAATTTCCTGGCTCAGGCTACTTTCCCAGT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAAACTGGGAAAGTAGCCTaGGCCAGGAAATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HLNRDGTWLQPAEAALVKTGKVA*ARKFWS
Trigger: TGACCAGAATTTCCTGGCTCAGGCTACTTTCCCAGT...TTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSGKCQS*SAGRPT
Trigger: AGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCC...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp CTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGTCCCGGGCTCGGCCATaGAACAGCTGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LFGSSFLSSCLPTNLTSLSRARP*NSWPEA
Trigger: TGCCTCAGGCCAGCTGTTTCATGGCCGAGCCCGGGA...CAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR TCA 90 bp TGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGCATGCTGGCTATGCTATaGGGCACCTTTGCGCCCACG +
Preference number: 4 (lower is better)
Translates to: CSIPAQPTMETELQEEKGMLAML*GTFAPT
Trigger: CGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCAT...GCCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGGGGCAAACAACTCCTaGTGCCAAAGCATTCGGCCC +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRGANNS*CQSIRP
Trigger: GGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCC...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAAAAGGTCTGTCACTTTaGACCCAGTCTACTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTKGLSL*TQSTCP
Trigger: GGGACAAGTAGACTGGGTTCAAAGTGACAGACCTTT...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCTGCAGGGGTGTGGGTaGCTGCAATGTATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETLQGCG*LQCILH
Trigger: ATGGAGGATACATTGCAGGCACCCACACCCCTGCAG...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTTTTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGATGTCCCCGCTGCGCTaGTCCAGGTCCGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FLCGVIFVPSQHSQLWKQMSPLR*SRSVSR
Trigger: GCGGCTGACGGACCTGGAGCAGCGCAGCGGGGACAT...CTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GCATGCATGGGATGGGGCAAACAACTCCTGATGCCAAAGCATTCGGCCCCAAGTCTGAGCATGAACTCCTaGACCTGGAGGCGATCAACA +
Preference number: 4 (lower is better)
Translates to: ACMGWGKQLLMPKHSAPSLSMNS*TWRRST
Trigger: TGTTGATCGCCTCCAGGTGCAGGAGTTCATGCTCAG...ACTTGGGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGTGCTGGACACGGCAATaGTTGATCTTGCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVCWTRQ*LILPSA
Trigger: GGCTGAGGGCAAGATCAAGCATTGCCGTGTCCAGCA...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TGGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGAGCGCAGCTTCATCTTaGGGTATAGCGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: WSWPHKMEGSISRSQGQMSAASS*GIAGVS
Trigger: AGAAACACCCGCTATACCGCAAGATGAAGCTGCGCT...CATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAAGTTGGCATAGGGTTTaGCTCTACATAGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTSWHRV*LYIEAR
Trigger: CCTGGCTTCTATGTAGAGGCAAACCCTATGCCAACT...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGGGCCACAAGCTGACTaGCACAGATCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: LGCEVNGSTESVWPWRGVGPQAD*HRSTWA
Trigger: TGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCCC...AACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR GCA 90 bp AGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCCCTCATCCCGCATGGTaGTTGGCTGCAGCACGTAGC +
Preference number: 4 (lower is better)
Translates to: SLLFGSSFLSSCLPTNLTPHPAW*LAAARS
Trigger: GCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGG...GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR GCA 90 bp CTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTCCAGCCCGCGGAGGCTaGTCTTGTCAAAGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LLFGSSFLSSCLPTNLTSPARGG*SCQRGR
Trigger: TCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGG...AGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR GCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCGTTCTTCAAAGGCACTaGTCTGTATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRVLQRH*SVSCLQ
Trigger: CTGAAGACAGGATACAGAGCAGTGCCTTTGAAGAAC...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLLSSIH*WNPGFR
Trigger: CCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGACACAGTACAGTTTTTaGCTTCATCCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLTQYSF*LHPELG
Trigger: CCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGT...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTCTCAGAGGTGAGGGCTaGCTTTCTAACCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCLRGEG*LSNLPI
Trigger: GATGGGAAGGTTAGAAAGGCAGCCCTCACCTCTGAG...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGGAACCACTTCTCATTaGAGTGCAGCTCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALGTTSH*SAALCC
Trigger: GCAGCACAGAGCTGCACTCCAATGAGAAGTGGTTCC...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAACATCCAGGGACCAGTaGGCCACCGACGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: ASFLFHPSTANYGNRASGTSRDQ*ATDAML
Trigger: CAGCATGGCGTCGGTGGCCCACTGGTCCCTGGATGT...TCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CCA 90 bp CACTGTAGGGACACGGCCTGCATGCATGGGATGGGGCAAACAACTCCTGATGCCCGTATTTCTCAGCCTTaGTTTCCGGGAAGGATGACA +
Preference number: 4 (lower is better)
Translates to: HCRDTACMHGMGQTTPDARISQP*FPGRMT
Trigger: TGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACG...GGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp AAGAGGGCCTGGTTCATCTGCATAGGCTTGTCAGGGGTCTGGAAGTTGAGGGCCTGCCACAGATCCACATaGGCAAAGGATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: KRAWFICIGLSGVWKLRACHRST*AKDRSW
Trigger: CCAACTACGATCCTTTGCCCATGTGGATCTGTGGCA...GGCCCTCAACTTCCAGACCCCTGACAAGCCTATGCAGATGAACCAGGCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCGCCTCGGCCATTCTTTaGCAGATGTCGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSASAIL*QMSGPQ
Trigger: CTGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGC...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCTTCAGGCCTTTTACTaGGAAAGTAGCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLLQAFY*ESSLSQ
Trigger: CTGGCTCAGGCTACTTTCCCAGTAAAAGGCCTGAAG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000609257.5
CDS-3UTR CCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCTCTGCGAGATGCTCCTaGGAGATGCGGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETSARCS*EMRKSS
Trigger: TGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGA...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGCTCTCCAACGAGGCTaGGGTACAACTAGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRALQRG*GTTRGG
Trigger: ACCGCCTCTAGTTGTACCCCAGCCTCGTTGGAGAGC...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCAAAGGGGCTTCGGCCATaGTCCTGGCCCCACAAGATG +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPKGLRP*SWPHKM
Trigger: CATCTTGTGGGGCCAGGACCATGGCCGAAGCCCCTT...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCAGTACAGAGAGCGTCTaGCCTTGGAGAGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: FLSSCLPTNLTSLNGDAVSTESV*PWRGVE
Trigger: CTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACT...GACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR CCA 90 bp GTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTTAGTACAGAGAGCGTCTaGCCTTGGAGAGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VQRASGLGEGLRASFLVLSTESV*PWRGVE
Trigger: CTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACT...AAGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR TCA 90 bp AGCTGCCTTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGATGGGGACCCGGTAGTTaGCCTGGGACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: SCLKKGRAVCSPGCVPERWGPGS*PGTACS
Trigger: AGAACATGCTGTCCCAGGTCAACTACCGGGTCCCCA...TCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAAGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCTCTGGGCGCTGTACATaGGGCTGCGGTACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSSGRCT*GCGTAE
Trigger: CTCAGCTGTACCGCAGCCTCATGTACAGCGCCCAGA...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCAAAGGCATGCTCCTTaGTGGTGTGCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETQRHAP*WCAGHL
Trigger: CAGATGTCCTGCACACCATCAAGGAGCATGCCTTTG...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCCCAGGGCCACGGGGTTaGCCATCTCTTCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: CGVIFVPSQHSQLWKQSFPGPRG*PSLPRS
Trigger: ACTACGTGGAAGAGATGGTCAACCCCGTGGCCCTGG...GAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR TCA 90 bp CTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTGGTTTCCGGGAAGGATaGCATGTCCCGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LSYSAPATSISTKGHTMPGFREG*HVPVAS
Trigger: GCTTGCTACCGGGACATGTCATCCTTCCCGGAAACC...AGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp CTGGAAGTGGAAGGGCTTGGCTGGCCATACAGGGTTGAGTCCATTGTCCACCACCAAATTCAGGGTTACTaGTCTGGAAGTGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LEVEGLGWPYRVESIVHHQIQGY*SGSGRA
Trigger: AGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTG...GTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCTCCTGTGCCACTGGCTaGGGCAGCCTCTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSSCATG*GSLSLQ
Trigger: TTGGAGAGAGAGGCTGCCTCAGCCAGTGGCACAGGA...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp CTGGTGATGGCAGGAGAACAAGGAGCCTGCAAGGGAGCCCATCTACCTTCTGGTGCCTTTCAACTGTGTTaGAAGGGCCCAGAGATTTCA +
Preference number: 4 (lower is better)
Translates to: LVMAGEQGACKGAHLPSGAFQLC*KGPEIS
Trigger: TGAAATCTCTGGGCCCTTTCAACACAGTTGAAAGGC...ACCAGAAGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCCTGCCATCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp CTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTCCTGCATGCACTGGCTaGAGAGTTGGTCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSYSAPATSISTKGHTMPPACTG*RVGLGR
Trigger: CCTGCCAAGACCAACTCTTCAGCCAGTGCATGCAGG...AGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp CCACCACCTTCTTGTGTATGGGAAAAAGCCACCCTCCTCTCTATGAACTGGGACAGCAGTCCAACTCAATaGAGCGACAGCCCATCCGCA +
Preference number: 4 (lower is better)
Translates to: PPPSCVWEKATLLSMNWDSSPTQ*SDSPSA
Trigger: TGCGGATGGGCTGTCGCTGCATTGAGTTGGACTGCT...GTCCCAGTTCATAGAGAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGACGTTGCCCTGGTCACTaGTGGTCTCCTCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRRCPGH*WSPQSS
Trigger: ACTACTCTGAGGAGACCAGCAGTGACCAGGGCAACG...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGGGGTCCCAGCATCTTaGCGGGAGTGGATACGGCAG +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGGVPAS*REWIRQ
Trigger: CTGCCGTATCCACTCCCGGCAAGATGCTGGGACCCC...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTACATGTGCTCAGCCTGTaGTCTGGTCAGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLHVLSL*SGQARV
Trigger: CACGCGAGCCTGACCAGAGCACAGGCTGAGCACATG...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGGGGCCACAAGCTGACTaGCACAGATCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: LFHPSTANYGNRASGREGGPQAD*HRSTWA
Trigger: TGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCCC...CCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCCTCATCCCGCATGGTaGTTGGCTGCAGCACGTAGC +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMPHPAW*LAAARS
Trigger: GCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGG...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCCAGCCCGCGGAGGCTaGTCTTGTCAAAGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLPARGG*SCQRGR
Trigger: TCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGG...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAACAAAAGGACACACAATaGCTCGGCCATTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLNRDGTWLQPAEAALVKQKDTQ*LGHSLA
Trigger: TGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTG...TTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp CTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTGCCGCCACAGGGGGCTaGTTCCAAAGAACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LLFGSSFLSSCLPTNLTSAATGG*FQRTQF
Trigger: GAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGC...AGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTCTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSLSSIH*WNPGFR
Trigger: CCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAG...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAACACAGTACAGTTTTTaGCTTCATCCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSTQYSF*LHPELG
Trigger: CCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCCTTGGAGTCTCCTGTaGCACTGGCTGAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMPWSLL*HWLRQP
Trigger: AGGCTGCCTCAGCCAGTGGCACAGGAGACTCCAAGG...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGGCCCTACATTCCTCTaGCCTGGCTCCAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTGPTFL*PGSRAK
Trigger: TTTGGCCCTGGAGCCAGGGCAGAGGAATGTAGGGCC...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCTCAGGTCTACAAAGCTaGCTTAAGAAAGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSSGLQS*LKKGRA
Trigger: AGCTCTGCCTTTCTTAAGGCAGCTTTGTAGACCTGA...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAAGTGAGCATGTCCCATaGAACAGGCTTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRSEHVP*NRLSLP
Trigger: GGGCAGGGAAAGCCTGTTGCATGGGACATGCTCACT...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS-3UTR CCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAAAAGAGGGTTGTTCATaGTGTCCGGGCATACTGCAT +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSKEGCS*CPGILH
Trigger: ATGCAGTATGCCCGGACACCATGAACAACCCTCTTT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACTGGGCAATGCTGCAGTaGTCCTCAATGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDWAMLQ*SSMDRM
Trigger: CATCCTGTCCATTGAGGACCACTGCAGCATTGCCCA...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGCCATGTTTCTCTGCTaGGCAATGCTGCAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRAMFLC*AMLQWS
Trigger: GGACCACTGCAGCATTGCCCAGCAGAGAAACATGGC...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTGGAACTTCTTGCCTTTaGCCTTGTTCACGTATTTCT +
Preference number: 4 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPGTSCL*PCSRIS
Trigger: AGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCC...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCCAGTCGCTGGCCCTTaGGGTAGATGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLPVAGP*GRCGRA
Trigger: AGCTCTCCCGCATCTACCCCAAGGGCCAGCGACTGG...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTACTGCAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACCCAGTCGCTGGCCCTTaGGGTAGATGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLQNNHLATVSSEHVPCNPVAGP*GRCGRA
Trigger: AGCTCTCCCGCATCTACCCCAAGGGCCAGCGACTGG...GTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTCCAGTCGCTGGCCCTTaGGGTAGATGCGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PFWFFIPELLPAHKSDLFPVAGP*GRCGRA
Trigger: AGCTCTCCCGCATCTACCCCAAGGGCCAGCGACTGG...AAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACGCAAAGGATCGTAGTTaGAGGAATCCAGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDAKDRS*RNPVAG
Trigger: GCCAGCGACTGGATTCCTCCAACTACGATCCTTTGC...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCGCAAAGGATCGTAGTTaGAGGAATCCAGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: FLSSCLPTNLTSLNGDAVAKDRS*RNPVAG
Trigger: GCCAGCGACTGGATTCCTCCAACTACGATCCTTTGC...GACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp CCTCAATCTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCATCCCGCATGGTGCTTaGCTGCAGCACGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: PQSPQKDTQCLGHSLADVIPHGA*LQHVAT
Trigger: TGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGAT...GACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp AGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCATCCCGCATGGTGCTTaGCTGCAGCACGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: SLLFGSSFLSSCLPTNLTIPHGA*LQHVAT
Trigger: TGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGAT...GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCAAATAGAGATGGCACATaGCTCCAGCCCGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPNRDGT*LQPAEA
Trigger: AGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATT...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCGACCCGAGTCCTTCTTaGGGCCCTTCGTTCTCGACT +
Preference number: 4 (lower is better)
Translates to: PPFWFFIPELLPAHKSDLDPSPS*GPSFST
Trigger: AGTCGAGAACGAAGGGCCCCAAGAAGGACTCGGGTC...GAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTTCTAGCATTCACTGCTaGAATCCAGGCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSSSIHC*NPGFRL
Trigger: CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp AGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCAGTCTCCTGTGCCACTaGCTGAGGCAGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLLFGSSFLSSCLPTNLTSLLCH*LRQPLS
Trigger: AGAGAGAGGCTGCCTCAGCCAGTGGCACAGGAGACT...GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTCTGTATCTTTCAGGCTaGGTCATGTTCCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALLYLSG*VMFPAM
Trigger: CATGGCTGGGAACATGACCCAGCCTGAAAGATACAG...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTGTGTGTGCTGAATGCTaGCTATGCTATGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSVCAEC*LCYEAP
Trigger: AGGTGCCTCATAGCATAGCCAGCATTCAGCACACAC...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
3UTR CAA 72 bp CGGGGGCAGAATGCCCCTGACCTTGTAGGCTCTACTTaGTATGTGTACATGTCTGCTGAGCCAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RGQNAPDLVGST*YVYMSAEPKLL
Trigger: CAACAGCTTTGGCTCAGCAGACATGTACACATACAAAGTAGAGCCTACAAGGTCAGGGGCATTCTGCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CAA 72 bp ATCTGGAAGTGGAAGGGCTTGGCTGGCCATACAGGGTaGAGTCCATTGTCCACCACAAACTCTGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IWKWKGLAGHTG*SPLSTTNSVFC
Trigger: GCAGAAGACAGAGTTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 72 bp GCAAATTCAGGGTTACTGATCTGGAAGTGGAAGGGCTaGGCTGGCCATACAGGGTTGAGTCCATTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ANSGLLIWKWKG*AGHTGLSPLST
Trigger: GGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 72 bp GCTGAAGAGTTGGTCTTGGCAGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAACTCCAGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: AEELVLAGKMSI*ISREANSRSSL
Trigger: CAGTGAGGACCTGGAGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCCTGCCAAGACCAACTCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTTGGAGAACAGGAAGGTaGCAAACTCATCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSWRTGR*QTHPGR
Trigger: TCTTCCTGGATGAGTTTGTCACCTTCCTGTTCTCCA...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGGGTGTGCAGGACATCTaGGAACTTGATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVGVQDI*ELDLGG
Trigger: ACCACCAAGATCAAGTTCTCAGATGTCCTGCACACC...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCGGACGGATGGCAATCTaGCAAGCCGGCACATCCAAG +
Preference number: 4 (lower is better)
Translates to: LCGVIFVPSQHSQLWKQSGRMAI*QAGTSK
Trigger: CTTGGATGTGCCGGCTTGTCAGATTGCCATCCGTCC...GCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR TCA 90 bp CTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGCAGGGGTCTGGAAGTTaGGGGCCACAAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LFGSSFLSSCLPTNLTSLQGSGS*GPQADC
Trigger: GCAGTCAGCTTGTGGCCCTCAACTTCCAGACCCCTG...CAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR TCA 90 bp CTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTAGTGCCTGCCCGTCATaGAGAGGGCCTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: LLFGSSFLSSCLPTNLTSSACPS*RGPGSS
Trigger: AGATGAACCAGGCCCTCTTCATGACGGGCAGGCACT...AGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR TCA 90 bp GCATGCATGGGATGGGGCAAACAACTCCTGATGCCAAAGCATTCGGCCCCAAGTCAAATTCAGGGTTACTaGTCTGGAAGTGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ACMGWGKQLLMPKHSAPSQIQGY*SGSGRA
Trigger: AGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTG...ACTTGGGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRGKCQS*SAGRPT
Trigger: AGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCC...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATGGCGGTTGTCTCCATTaGCCCGAGTCCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDGGCLH*PESFLG
Trigger: CCCCAAGAAGGACTCGGGTCAATGGAGACAACCGCC...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCACTGCAGGGGTGTGGGTaGCTGCAATGTATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPLQGCG*LQCILH
Trigger: ATGGAGGATACATTGCAGGCACCCACACCCCTGCAG...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCCCTCCTCGTAGGCACTaGCCTCAGCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LCGVIFVPSQHSQLWKQSPPRRH*PQPASC
Trigger: ACAAGAAGCTGGCTGAGGGCAGTGCCTACGAGGAGG...GCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGGCCAATCTTCTCCAGTaGCTCCTCGTTGATGGGATA +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVANLLQ*LLVDGI
Trigger: TATCCCATCAACGAGGAGGCACTGGAGAAGATTGGC...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCAACTGAAGGAACTTCTTaGCTTTGGCCTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSTEGTS*LWPCSR
Trigger: ACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTCAGT...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAAGGGGCCACAAGCTGACTaGCACAGATCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: YTTKRRKANSGLLIWKWKGPQAD*HRSTWA
Trigger: TGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCCC...CTTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCCCTCATCCCGCATGGTaGTTGGCTGCAGCACGTAGC +
Preference number: 4 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSPHPAW*LAAARS
Trigger: GCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGG...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAACAAACTCTGTCTTCTaGTTGGTGCTGTCATACTCA +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTTNSVF*LVLSYS
Trigger: TGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGT...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAAGTTCTTCAAAGGCACTaGTCTGTATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HLNRDGTWLQPAEAALVKVLQRH*SVSCLQ
Trigger: CTGAAGACAGGATACAGAGCAGTGCCTTTGAAGAAC...TTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTAGGTCACCATTCTCCTaGTTGGCAGGGAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALRSPFS*LAGKMS
Trigger: TGACATTTTCCCTGCCAAGCAGGAGAATGGTGACCT...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244007.7
CDS-3UTR GCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALTVKMV*EMLLGD
Trigger: ATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGT...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAAGCTATGAGGCACCTTTaGGCCCACGGGCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQAMRHL*AHGPGP
Trigger: GGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGC...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCCACCAACAAACACTCTaGCTTCTGGGTCAATCAACA +
Preference number: 4 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLHQQTL*LLGQST
Trigger: TGTTGATTGACCCAGAAGGCAGAGTGTTTGTTGGTG...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCTGTAGGGACACGGCCTaGATGCATGGGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSCRDTA*MHGMGQ
Trigger: TTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACA...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTATCCCTCTCCCGGCCCTaGCTGCTCTTTTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLSLSRP*LLFWFV
Trigger: CACAAACCAAAAGAGCAGGCAGGGCCGGGAGAGGGA...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCAGGAGAACAAGGAGCCTaGAAGGGAGCCCATCTACCT +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPGEQGA*KGAHLP
Trigger: AGGTAGATGGGCTCCCTTGCAGGCTCCTTGTTCTCC...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp AGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTaGCTGCCCACAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: STESVWPWRGVESLLFGSSFLSS*LPTNLT
Trigger: GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGA...AGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR GCA 90 bp TGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCCCCAGAGATTTCAGCTaGCAAGTCCCTGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: CGVIFVPSQHSQLWKQSFPRDFS*QVPGVC
Trigger: GCAGACGCCAGGGACTTGGCAGCTGAAATCTCTGGG...GAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612731.2
CDS-3UTR CCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGGTCTCCAGCTTGACCTaGAAGGTCTTCCGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMVSSLT*KVFRSG
Trigger: ACCCGAGCGGAAGACCTTCCAGGTCAAGCTGGAGAC...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTCCGGCCGGAAAGCTaGGTCCTCTTGATAGCGATC +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTVRPES*VLLIAI
Trigger: GATCGCTATCAAGAGGACCCAGCTTTCCGGCCGGAC...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGTCAAGAAGGAACTGCTaGAACTCAGGAAGGGACACT +
Preference number: 4 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRSRRNC*NSGRDT
Trigger: AGTGTCCCTTCCTGAGTTCCAGCAGTTCCTTCTTGA...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCTGAGATGAACTCCTGCACCTaGAGGCGATCAACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: IIWRLFLVSMSHATGFPEMNSCT*RRSTAH
Trigger: GTGGGCTGTTGATCGCCTCCAGGTGCAGGAGTTCAT...CTCAGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGGACTCACTGGAGAACTaGTCCCCGGTCAGGTACGTG +
Preference number: 4 (lower is better)
Translates to: LMAWFLSSIHCWNPGFRLDSLEN*SPVRYV
Trigger: CACGTACCTGACCGGGGACCAGTTCTCCAGTGAGTC...CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCTGAGTCATCCTCGTTGCCCTaGTCACTGCTGGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IIWRLFLVSMSHATGFPESSSLP*SLLVSS
Trigger: TGAGGAGACCAGCAGTGACCAGGGCAACGAGGATGA...CTCAGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTTGCTTCTCCACATTCTaGATGATGGCGCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSCFSTF*MMALLM
Trigger: CATCAAGAGCGCCATCATCCAGAATGTGGAGAAGCA...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGTGCTTCTCCACATTCTaGATGATGGCGCTCTTGATG +
Preference number: 4 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRCFSTF*MMALLM
Trigger: CATCAAGAGCGCCATCATCCAGAATGTGGAGAAGCA...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGCTGCCTTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGACTGGCGTCTGCTGTCTaGGCCACTTCACGGATCTTT +
Preference number: 4 (lower is better)
Translates to: SCLKKGRAVCSPGCVPERLASAV*ATSRIF
Trigger: AAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAG...TCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAAGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTCTGGCGTCTGCTGTCTaGGCCACTTCACGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSYSAPATSISTKGHTMPLASAV*ATSRIF
Trigger: AAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAG...AGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp GGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGCTGGCGTCTGCTGTCTaGGCCACTTCACGGATCTTT +
Preference number: 4 (lower is better)
Translates to: GVIFVPSQHSQLWKQSFRLASAV*ATSRIF
Trigger: AAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAG...CCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CCA 90 bp TCAGGGTTACTGATCTGGAAGTGGAAGGGCTTGGCTGGCCATACAGGGTTGAGTCTTCAGGCCTTTTACTaGGAAAGTAGCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGLLIWKWKGLAGHTGLSLQAFY*ESSLSQ
Trigger: CTGGCTCAGGCTACTTTCCCAGTAAAAGGCCTGAAG...ACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp TTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCGCTCTCCAACGAGGCTaGGGTACAACTAGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LCGVIFVPSQHSQLWKQSALQRG*GTTRGG
Trigger: ACCGCCTCTAGTTGTACCCCAGCCTCGTTGGAGAGC...GCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCTCTAGCATTCACTGCTaGAATCCAGGCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CEVNGSTESVWPWRGVESSSIHC*NPGFRL
Trigger: CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA...GCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp TTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGTACATTCCTCTGCCCTaGCTCCAGGGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LFHPSTANYGNRASGREGYIPLP*LQGQTA
Trigger: TGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA...CCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CCACCACCTTCTTGTGTATGGGAAAAAGCCACCCTCCTCTCTATGAACTGGGACACCACCAAAACTGGCTaGCCACAAAGAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPPSCVWEKATLLSMNWDTTKTG*PQRTQA
Trigger: TGCCTGGGTTCTTTGTGGCCAGCCAGTTTTGGTGGT...GTCCCAGTTCATAGAGAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TTTTTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGCAGCTGCCAAGTCCCTaGCGTCTGCTGTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FLCGVIFVPSQHSQLWKQQLPSP*RLLSGP
Trigger: TGGCCCAGACAGCAGACGCCAGGGACTTGGCAGCTG...CTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612731.2
CDS-3UTR TCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCAGTAGAACAAAGTCATaGCGGTGCCCACCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSSRTKS*RCPPRG
Trigger: GCCTCGAGGTGGGCACCGTCATGACTTTGTTCTACT...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTGGCGCGTCTCCAGCTTaGCCTGGAAGGTCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSGASPA*PGRSSA
Trigger: AGCGGAAGACCTTCCAGGTCAAGCTGGAGACGCGCC...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGCCTCTTCCACGTAGTTTaGTGGGAACCACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CSIPAQPTMETELQEEKGLFHVV*WEPQLL
Trigger: AAGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAG...GCCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR TCA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCGGACGGATGGCAATCTaGCAAGCCGGCACATCCAAG +
Preference number: 4 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFIGRMAI*QAGTSK
Trigger: CTTGGATGTGCCGGCTTGTCAGATTGCCATCCGTCC...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGACCACCGACGCCATGCTaGTGGAGAAGACGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: IFVPSQHSQLWKQSFRKRPPTPC*WRRRRA
Trigger: GGCTCTTCGTCTTCTCCATCAGCATGGCGTCGGTGG...TCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGGTTTCCGGGAAGGATaGCATGTCCCGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGGFREG*HVPVAS
Trigger: GCTTGCTACCGGGACATGTCATCCTTCCCGGAAACC...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATGGTTTCCGGGAAGGATaGCATGTCCCGGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDGFREG*HVPVAS
Trigger: GCTTGCTACCGGGACATGTCATCCTTCCCGGAAACC...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGTTGAGGGCCACAAGCTaGCTGCCACAGATCCACATG +
Preference number: 4 (lower is better)
Translates to: LMAWFLSSIHCWNPGFRLLRATS*LPQIHM
Trigger: CATGTGGATCTGTGGCAGTCAGCTTGTGGCCCTCAA...CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAGGGCCACAAGCTaGCTGCCACAGATCCACATG +
Preference number: 4 (lower is better)
Translates to: LLFGSSFLSSCLPTNLTSLRATS*LPQIHM
Trigger: CATGTGGATCTGTGGCAGTCAGCTTGTGGCCCTCAA...AGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR TCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCAGTGCCTGCCCGTCATaGAGAGGGCCTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLSACPS*RGPGSS
Trigger: AGATGAACCAGGCCCTCTTCATGACGGGCAGGCACT...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: CEVNGSTESVWPWRGVESGKCQS*SAGRPT
Trigger: AGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCC...GCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR TCA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVGKCQS*SAGRPT
Trigger: AGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCC...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR TCA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCTCTTGCTGCTTAACCTaGGAAATTTCCAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRSCCLT*EISRNF
Trigger: GAAATTTCTGGAAATTTCTCAGGTTAAGCAGCAAGA...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTTGTGTACATGTCTGCTaGGCCAAAGCTGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCCVHVC*AKAVES
Trigger: ACTTTCAACAGCTTTGGCTCAGCAGACATGTACACA...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp GAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTTTGGTTCTTCATTCCTaGGCTCTTGCCTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: ERLHLVVKLMGVQRASGLLVLHS*ALACPQ
Trigger: TTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAA...AAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR GCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAAGCAGTCCAACTCAATaGAGCGACAGCCCATCCGCA +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTSSPTQ*SDSPSA
Trigger: TGCGGATGGGCTGTCGCTGCATTGAGTTGGACTGCT...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAAGTAGTAGATCTTGCTaGTGGTCAGAACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTSSRSC*WSEQSS
Trigger: ACTACTTTGTTCTGACCAGCAGCAAGATCTACTACT...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCTGAGAGTCAGGCTCAGCTGTaGCAATCTTCTCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: IIWRLFLVSMSHATGFPESQAQL*QSSPVP
Trigger: AGGCACTGGAGAAGATTGGCACAGCTGAGCCTGACT...CTCAGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCAGAGCCGGTTGTTCTTaGCCTCAGGACGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSRAGCS*PQDGWQ
Trigger: TTGCCATCCGTCCTGAGGGCAAGAACAACCGGCTCT...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTCATACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGAGGGCCTGGTTCATCTaGATAGGCTTGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LIHHEAQKGKFRVTDLEVRAWFI*IGLSGV
Trigger: GACCCCTGACAAGCCTATGCAGATGAACCAGGCCCT...CACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp CCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGTGTTCTTCAAAGGCACTaGTCTGTATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PCIFQAGSCSQPWAMCPCVLQRH*SVSCLQ
Trigger: CTGAAGACAGGATACAGAGCAGTGCCTTTGAAGAAC...ACAAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGGATGCTCCTGGGAGATaGGGAAGTCCTCAAACGGCT +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMDAPGR*GSPQTA
Trigger: AGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATC...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETTVKMV*EMLLGD
Trigger: ATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGT...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp CGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RASALGCEVNGSTESVWPTVKMV*EMLLGD
Trigger: ATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGT...AGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp CCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGCTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PAHKSDLFEWGRSPSTEKLSSIH*WNPGFR
Trigger: CCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAG...CTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp CACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGACACAGTACAGTTTTTaGCTTCATCCAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLVVKLMGVQRASGLGEGTQYSF*LHPELG
Trigger: CCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGT...CCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCCATTCAGCACCTAACTaGCTGTACCCCACCCACCCA +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGHSAPN*LYPTHP
Trigger: TGGGTGGGTGGGGTACAGGCAGTTAGGTGCTGAATG...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp GCATGCATGGGATGGGGCAAACAACTCCTGATGCCAAAGCATTCGGCCCCAAGTCCTACCTGCTTCTACTaGAGAATAATCATCTGGCGA +
Preference number: 4 (lower is better)
Translates to: ACMGWGKQLLMPKHSAPSPTCFY*RIIIWR
Trigger: TCGCCAGATGATTATTCTGCAGTAGAAGCAGGTAGG...ACTTGGGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGGGACACGGCCTGCATaGATGGGATGGGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGGTRPA*MGWGKQ
Trigger: TTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCC...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGACACTTGTTCTCCCGGCCCTGCCTaGTCTTTTGGTTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRKAELSVPQVVFQKDTCSPGPA*SFGLCC
Trigger: GCAGCACAAACCAAAAGAGCAGGCAGGGCCGGGAGA...ACAAGTGTCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp AGCTGCCTTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGAGACCCCTGCCTTTTCTaGTCATGGCCACAGATACTC +
Preference number: 4 (lower is better)
Translates to: SCLKKGRAVCSPGCVPERDPCLF*SWPQIL
Trigger: GAGTATCTGTGGCCATGAGCAGAAAAGGCAGGGGTC...TCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAAGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCAGGAGGCAGACCCCTaGCTTTTCTGCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDQEADP*LFCSWP
Trigger: TGGCCATGAGCAGAAAAGGCAGGGGTCTGCCTCCTG...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCTCAAGAAGGAACTGCTaGAACTCAGGAAGGGACACT +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETSRRNC*NSGRDT
Trigger: AGTGTCCCTTCCTGAGTTCCAGCAGTTCCTTCTTGA...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGATGAACTCCTGCACCTaGAGGCGATCAACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LMAWFLSSIHCWNPGFRLMNSCT*RRSTAH
Trigger: GTGGGCTGTTGATCGCCTCCAGGTGCAGGAGTTCAT...CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGATCTTCCTCTTAAGCTaGTTGGGTGAGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LMAWFLSSIHCWNPGFRLIFLLS*LGEGSP
Trigger: CGGGCTCCCCTCACCCAACCAGCTTAAGAGGAAGAT...CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGGCTCAGCCTGTGCTCTaGTCAGGCTCGCGTGGTACC +
Preference number: 4 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLAQPVL*SGSRGT
Trigger: GGTACCACGCGAGCCTGACCAGAGCACAGGCTGAGC...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCAGCCCGGAAAGAGATaGCATATGAGTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETQPGKR*HMSWVH
Trigger: ATGAACCCAACTCATATGCCATCTCTTTCCGGGCTG...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCCCTAGCATCACTGTCTaGCCCTCTTGCTGGACACGG +
Preference number: 4 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSPSITV*PSCWTR
Trigger: CCGTGTCCAGCAAGAGGGCCAGACAGTGATGCTAGG...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCCTGGCGTCTGCTGTCTaGGCCACTTCACGGATCTTT +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGLASAV*ATSRIF
Trigger: AAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAG...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCGTATTTCTCAGCCTTaGTTTCCGGGAAGGATGACA +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDRISQP*FPGRMT
Trigger: TGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACG...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TGGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGGGAACTTCTTGCCTTTaGCCTTGTTCACGTATTTCT +
Preference number: 4 (lower is better)
Translates to: WSWPHKMEGSISRSQGQMGTSCL*PCSRIS
Trigger: AGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCC...CATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGATGCCACAGATCCACATaGGCAAAGGATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRCHRST*AKDRSW
Trigger: CCAACTACGATCCTTTGCCCATGTGGATCTGTGGCA...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGATGCCACAGATCCACATaGGCAAAGGATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: RLHLVVKLMGVQRASGLGCHRST*AKDRSW
Trigger: CCAACTACGATCCTTTGCCCATGTGGATCTGTGGCA...TCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp ATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTGTCATGAAGAGGGCCTaGTTCATCTGCATAGGCTTG +
Preference number: 4 (lower is better)
Translates to: IPELLPAHKSDLFEWGRSVMKRA*FICIGL
Trigger: CAAGCCTATGCAGATGAACCAGGCCCTCTTCATGAC...ACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCACTCTGTCTTCTGCTTaGTGCTGTCATACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETTLSSA*CCHTQL
Trigger: GAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGT...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGGCTTGGCTGGCCATACAGGGTTGAGTCCATTGTCCACCACAAACTCTGTCTTACTCTGTCTTCTGCTTaGTGCTGTCATACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLGWPYRVESIVHHKLCLTLSSA*CCHTQL
Trigger: GAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGT...AAGACAGAGTTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp AGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTACTCTGTCTTCTGCTTaGTGCTGTCATACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: STESVWPWRGVESLLFGSTLSSA*CCHTQL
Trigger: GAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGT...AGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACATCTGCGAGATGCTCCTaGGAGATGCGGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTSARCS*EMRKSS
Trigger: TGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGA...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCGACCCGAGTCCTTCTTaGGGCCCTTCGTTCTCGACT +
Preference number: 4 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFIDPSPS*GPSFST
Trigger: AGTCGAGAACGAAGGGCCCCAAGAAGGACTCGGGTC...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCTCTCCAACGAGGCTaGGGTACAACTAGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGALQRG*GTTRGG
Trigger: ACCGCCTCTAGTTGTACCCCAGCCTCGTTGGAGAGC...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGCTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGLRPWS*PHKMEG
Trigger: TCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAG...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGAGTCTCCTGTGCCACTaGCTGAGGCAGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGSLLCH*LRQPLS
Trigger: AGAGAGAGGCTGCCTCAGCCAGTGGCACAGGAGACT...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCTACATTCCTCTGCCCTaGCTCCAGGGCCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGYIPLP*LQGQTA
Trigger: TGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTTTCACCGAGTTAGTCTaGTGGGATAACCTGAACCTA +
Preference number: 4 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALFTELV*WDNLNL
Trigger: TAGGTTCAGGTTATCCCACCAGACTAACTCGGTGAA...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCGAGCCCTGCATGCACTaGCTGAAGAGTTGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSEPCMH*LKSWSS
Trigger: GCTCGACCAACTCTTCAGCCAGTGCATGCAGGGCTC...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607954.1
3UTR CAA 72 bp CATGCACTGGCTGAAGAGTTGGTCGAGCGTCTGCACTaGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: HALAEELVERLH*VVKLMGVQRAS
Trigger: AGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGACCAACTCTTCAGCCAGTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR TCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCAGTAGAACAAAGTCATaGCGGTGCCCACCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLSRTKS*RCPPRG
Trigger: GCCTCGAGGTGGGCACCGTCATGACTTTGTTCTACT...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGGCGATCAAAGTCCCGTaGGGTCTTCCCTGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLAIKVP*GLPWAD
Trigger: ATCCGCCCAGGGAAGACCTCACGGGACTTTGATCGC...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCAATGACAAAGCAATGTaGCTGGTCCGGCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSNDKAM*LVRPES
Trigger: GCTTTCCGGCCGGACCAGTCACATTGCTTTGTCATT...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTCCATTCCATAGAGAATaGCAAAGCAATGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSPFHRE*QSNVTG
Trigger: ACCAGTCACATTGCTTTGTCATTCTCTATGGAATGG...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGATGGAGAACAGGAAGGTaGCAAACTCATCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRWRTGR*QTHPGR
Trigger: TCTTCCTGGATGAGTTTGTCACCTTCCTGTTCTCCA...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCTGTGGGACAGGCTCTaGAAGTCGCATCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMLWDRL*KSHLKL
Trigger: GAGTTTGAGATGCGACTTTCAGAGCCTGTCCCACAG...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCTGGCCATACAGGGTTaGGTCCATTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMLAIQG*VHCPPQ
Trigger: TTGTGGTGGACAATGGACTCAACCCTGTATGGCCAG...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCAAATTCAGGGTTACTaGTCTGGAAGTGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: IPELLPAHKSDLFEWGRSQIQGY*SGSGRA
Trigger: AGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTG...ACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR TCA 90 bp AGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCACTGGGAAAGTAGCCTaGGCCAGGAAATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLLFGSSFLSSCLPTNLTTGKVA*ARKFWS
Trigger: TGACCAGAATTTCCTGGCTCAGGCTACTTTCCCAGT...GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR TCA 90 bp TGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGCGTTCAAGCTCTCAGGTaGTGTTCAAGATGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CSIPAQPTMETELQEEKGVQALR*CSRCAW
Trigger: CCAAGCACATCTTGAACATCACCTGAGAGCTTGAAC...GCCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATCCTGCATGCACTGGCTaGAGAGTTGGTCGAGCGTCT +
Preference number: 4 (lower is better)
Translates to: FGSSFLSSCLPTNLTSLNPACTG*RVGRAS
Trigger: AGACGCTCGACCAACTCTTCAGCCAGTGCATGCAGG...ATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR GCA 90 bp TTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGACACTTGTGAGGCCACAAAGGCATaGTCCTTGATGGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRKAELSVPQVVFQKDTCEATKA*SLMVCR
Trigger: CCTGCACACCATCAAGGAGCATGCCTTTGTGGCCTC...ACAAGTGTCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGAGTAGTAGATCTTGCTaGTGGTCAGAACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: VLAPQDGRIHLQKSGPDVSSRSC*WSEQSS
Trigger: ACTACTTTGTTCTGACCAGCAGCAAGATCTACTACT...CACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCTGCTGGACACGGCAATaGTTGATCTTGCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSCWTRQ*LILPSA
Trigger: GGCTGAGGGCAAGATCAAGCATTGCCGTGTCCAGCA...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCAAGCGCAGCTTCATCTTaGGGTATAGCGGGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPSAASS*GIAGVS
Trigger: AGAAACACCCGCTATACCGCAAGATGAAGCTGCGCT...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAACATAGAAGCCAGGGTTaGGTCCCTCATACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FLFHPSTANYGNRASGREHRSQG*VPHTGP
Trigger: GGGCCCTGTATGAGGGACGCAACCCTGGCTTCTATG...TTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TTTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGAGAGCCGGTTGTTCTTaGCCTCAGGACGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: FVWRHFCSIPAQPTMETERAGCS*PQDGWQ
Trigger: TTGCCATCCGTCCTGAGGGCAAGAACAACCGGCTCT...CTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR GCA 90 bp CCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTAGGGCCTGGTTCATCTaGATAGGCTTGTCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PFWFFIPELLPAHKSDLFRAWFI*IGLSGV
Trigger: GACCCCTGACAAGCCTATGCAGATGAACCAGGCCCT...AAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR GCA 90 bp CGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGACAAAAGGACACACAATaGCTCGGCCATTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RLHLVVKLMGVQRASGLGQKDTQ*LGHSLA
Trigger: TGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTG...TCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR GCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCACTGTCTTCTGCTTGGTaGTGTCATACTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPLSSAW*CHTQLQ
Trigger: CTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAG...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TCAATCTCCACAAAAGGACACACAATGCCTCGGCCATTCTTTGGCAGATGTCGGCTGTCTTCTGCTTGGTaGTGTCATACTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SISTKGHTMPRPFFGRCRLSSAW*CHTQLQ
Trigger: CTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAG...CCGACATCTGCCAAAGAATGGCCGAGGCATTGTGTGTCCTTTTGTGGAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp AGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCCTGTCTTCTGCTTGGTaGTGTCATACTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLFGSSFLSSCLPTNLTLSSAW*CHTQLQ
Trigger: CTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAG...GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR GCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGATGCTCCTGGGAGATaGGGAAGTCCTCAAACGGCT +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGDAPGR*GSPQTA
Trigger: AGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATC...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAAAATGGTCTGCGAGATaGTCCTGGGAGATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTKWSAR*SWEMRK
Trigger: CTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTT...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTAAAATGGTCTGCGAGATaGTCCTGGGAGATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLKWSAR*SWEMRK
Trigger: CTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTT...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTAAGGCGCACAGCACCTaGTGCTCTCCAACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSKAHST*CSPTRL
Trigger: CAGCCTCGTTGGAGAGCAGCAGGTGCTGTGCGCCTT...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACAGGGCCAGATGTGTGTaGTTAATGCGAAACACAGTA +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDRARCV*LMRNTV
Trigger: TACTGTGTTTCGCATTAAGCACACACATCTGGCCCT...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp TTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCTCAGAGGTGAGGGCTaGCTTTCTAACCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: LMAWFLSSIHCWNPGFRLLRGEG*LSNLPI
Trigger: GATGGGAAGGTTAGAAAGGCAGCCCTCACCTCTGAG...CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAGTCTCCAGCTTGACCTaGAAGGTCTTCCGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: IFVPSQHSQLWKQSFRKRVSSLT*KVFRSG
Trigger: ACCCGAGCGGAAGACCTTCCAGGTCAAGCTGGAGAC...TCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATAGGTCCATCGTCTTCTaGGCGCTGTACATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDRSIVF*ALYMRL
Trigger: CAGCCTCATGTACAGCGCCCAGAAGACGATGGACCT...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCTCATCCTCGTTGCCCTaGTCACTGCTGGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFISSSLP*SLLVSS
Trigger: TGAGGAGACCAGCAGTGACCAGGGCAACGAGGATGA...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAGGCTTGTCAGGGGTCTaGAAGTTGAGGGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: IFVPSQHSQLWKQSFRKRGLSGV*KLRATS
Trigger: GCTTGTGGCCCTCAACTTCCAGACCCCTGACAAGCC...TCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TGCTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCGTCATGAAGAGGGCCTaGTTCATCTGCATAGGCTTG +
Preference number: 4 (lower is better)
Translates to: CCHTQLQPPQSPQKDTQCVMKRA*FICIGL
Trigger: CAAGCCTATGCAGATGAACCAGGCCCTCTTCATGAC...GCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp AAAACTAAAAGGGTCAACACTAACAAACACGCCAAGGACGTCCTAACCAACGTGGTGGAAGGGCTTGGCTaGCCATACAGGGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KTKRVNTNKHAKDVLTNVVEGLG*PYRVES
Trigger: GGACTCAACCCTGTATGGCCAGCCAAGCCCTTCCAC...CACGTTGGTTAGGACGTCCTTGGCGTGTTTGTTAGTGTTGACCCTTTTAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACTCAGGGTTACTGATCTaGAAGTGGAAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSFLSSCLPTNLTSLNGDSGLLI*KWKGLA
Trigger: AGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGA...GTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp GGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGCTTCAGGCCTTTTACTaGGAAAGTAGCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSSFLSSCLPTNLTSLNGLQAFY*ESSLSQ
Trigger: CTGGCTCAGGCTACTTTCCCAGTAAAAGGCCTGAAG...CCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CCA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSISLMA*FLSSIH
Trigger: GTGAATGCTAGACAGAAACCAAGCCATTAATGAGAT...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATCTTCGGCCATGGTCCTaGCCCCACAAGATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FGSSFLSSCLPTNLTSLNLRPWS*PHKMEG
Trigger: TCCTTCCATCTTGTGGGGCCAGGACCATGGCCGAAG...ATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp TTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAAGTCTCCTGTGCCACTaGCTGAGGCAGCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FLFHPSTANYGNRASGRESLLCH*LRQPLS
Trigger: AGAGAGAGGCTGCCTCAGCCAGTGGCACAGGAGACT...TTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCATGTCAGTAGCTCCTTaGAGTCTCCTGTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGMSVAP*SLLCHW
Trigger: CCAGTGGCACAGGAGACTCCAAGGAGCTACTGACAT...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTATCATGTTCCCAGCCATaGGCAATGTGCCCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLSCSQP*AMCPCA
Trigger: AGCACAAGGGCACATTGCCCATGGCTGGGAACATGA...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAACTGGAAAGGGGCTCTaGTTGTTTCCAGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTTGKGL*LFPAHH
Trigger: GTGGTGAGCTGGAAACAACCAGAGCCCCTTTCCAGT...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp GCACTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGCCTAGAGAGGAAACATaGATCATGAGGGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALSLFDTGYHQFMSSTEPPREET*IMRAQV
Trigger: CACCTGGGCCCTCATGATCCATGTTTCCTCTCTAGG...CGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGATCTGACCTCTTTGAATaGGGACGCAGTCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: RLHLVVKLMGVQRASGLGSDLFE*GRSPST
Trigger: TGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGA...TCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR CCA 90 bp GGCCACAAGCTGACTGCCACAGATCCACATGGGCAAAGGATCGTAGTTGGAGGACTGAAGAGTTGGTCTTaGCAGGGAAAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: GHKLTATDPHGQRIVVGGLKSWS*QGKCQS
Trigger: AGATTGACATTTTCCCTGCCAAGACCAACTCTTCAG...TCCTCCAACTACGATCCTTTGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
3UTR CAA 72 bp TTGAGTCCATTGTCCACCACAAACTCTGTCTTCTGCTaGGTGCTGTCATACTCAGCTCCAGCCACCTCAATC +
Preference number: 4 (lower is better)
Translates to: LSPLSTTNSVFC*VLSYSAPATSI
Trigger: GATTGAGGTGGCTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGTGGTGGACAATGGACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCACGATTCCGATCCACTaGGTAAAACTGCTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGTIPIH*VKLLPE
Trigger: CTCCGGAAGCAGTTTTACTCAGTGGATCGGAATCGT...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCGGTGTGCAGGACATCTaGGAACTTGATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSGVQDI*ELDLGG
Trigger: ACCACCAAGATCAAGTTCTCAGATGTCCTGCACACC...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp AAAACTAAAAGGGTCAACACTAACAAACACGCCAAGGACGTCCTAACCAACGTGCCTCAATGGACAGGATaGCTGGGTACTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KTKRVNTNKHAKDVLTNVPQWTG*LGTLRP
Trigger: TGGCCTCAGAGTACCCAGTCATCCTGTCCATTGAGG...CACGTTGGTTAGGACGTCCTTGGCGTGTTTGTTAGTGTTGACCCTTTTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp CTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGCTGGCCATACAGGGTTaGGTCCATTGTCCACCACAA +
Preference number: 4 (lower is better)
Translates to: LFGSSFLSSCLPTNLTSLLAIQG*VHCPPQ
Trigger: TTGTGGTGGACAATGGACTCAACCCTGTATGGCCAG...CAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR TCA 90 bp CTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACT +
Preference number: 4 (lower is better)
Translates to: LSYSAPATSISTKGHTMPGKCQS*SAGRPT
Trigger: AGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCC...AGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR TCA 90 bp ACACGCCAAGGACGTCCTAACCAACGTGGATGGGCCCTAACAGAAGGGCCTACATCAGGGAAAGCATACTaGGTCTTCTTTGACTTAAAA +
Preference number: 4 (lower is better)
Translates to: TRQGRPNQRGWALTEGPTSGKAY*VFFDLK
Trigger: TTTTAAGTCAAAGAAGACTCAGTATGCTTTCCCTGA...TGTAGGCCCTTCTGTTAGGGCCCATCCACGTTGGTTAGGACGTCCTTGGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TTTTTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGAGCCCAAGAGAGGTaGGCCTCAGGTCTACAAAGC +
Preference number: 4 (lower is better)
Translates to: FLCGVIFVPSQHSQLWKQRAQER*ASGLQS
Trigger: GCTTTGTAGACCTGAGGCTCACCTCTCTTGGGCTCT...CTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTACATACTGCATCCAGCTaGGAGTTCCACACACTGTTC +
Preference number: 4 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLHTASS*EFHTLF
Trigger: GAACAGTGTGTGGAACTCGCAGCTGGATGCAGTATG...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCCATACTGCATCCAGCTaGGAGTTCCACACACTGTTC +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGHTASS*EFHTLF
Trigger: GAACAGTGTGTGGAACTCGCAGCTGGATGCAGTATG...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGTCTGCTGGGCAATGCTaGAGTGGTCCTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGSAGQC*SGPQWT
Trigger: TGTCCATTGAGGACCACTGCAGCATTGCCCAGCAGA...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCGCCAATCTTCTCCAGTaGCTCCTCGTTGATGGGATA +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGANLLQ*LLVDGI
Trigger: TATCCCATCAACGAGGAGGCACTGGAGAAGATTGGC...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp TTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGATGCTCCTGGGAGATaGGGAAGTCCTCAAACGGCT +
Preference number: 4 (lower is better)
Translates to: FLFHPSTANYGNRASGREDAPGR*GSPQTA
Trigger: AGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATC...TTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACACTGTCTAGCATTCACTaGTGGAATCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTLSSIH*WNPGFR
Trigger: CCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAG...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTAGGGCCAGATGTGTGTaGTTAATGCGAAACACAGTA +
Preference number: 4 (lower is better)
Translates to: ERLHLVVKLMGVQRASGLRARCV*LMRNTV
Trigger: TACTGTGTTTCGCATTAAGCACACACATCTGGCCCT...AAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR GCA 90 bp CTACTGCAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACACTGAGGTCAGAAACTaGTCCTGCCATCTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLQNNHLATVSSEHVPCNTEVRN*SCHLPA
Trigger: TGCGGGAAGATGGCAGGAGCAGTTTCTGACCTCAGT...GTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTATCATTCCTGAGCTCTTaGCTGCCCACAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLSFLSS*LPTNLT
Trigger: GGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGA...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGTTTCACGAATGTCAATaGCCCCCTCGATCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMFHECQ*PPRSCR
Trigger: CCGACAAGATCGAGGGGGCCATTGACATTCGTGAAA...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGCAATCTGCAGGGGTGTaGGTGCCTGCAATGTATCCT +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGQSAGV*VPAMYP
Trigger: AGGATACATTGCAGGCACCCACACCCCTGCAGATTG...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTGTCAAGAAGAACTTaGGGGTCCCAGCATCTTGCC +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDLSRRT*GSQHLA
Trigger: GGCAAGATGCTGGGACCCCCAAGTTCTTCTTGACAG...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TGCTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCGTATTTCTCAGCCTTaGTTTCCGGGAAGGATGACA +
Preference number: 4 (lower is better)
Translates to: CCHTQLQPPQSPQKDTQCRISQP*FPGRMT
Trigger: TGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACG...GCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTATCAGGGTTACTGATCTaGAAGTGGAAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLSGLLI*KWKGLA
Trigger: AGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGA...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGTCAGGGTTACTGATCTaGAAGTGGAAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMSGLLI*KWKGLA
Trigger: AGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGA...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTCATACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGTCAGGGTTACTGATCTaGAAGTGGAAGGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LIHHEAQKGKFRVTDLEVSGLLI*KWKGLA
Trigger: AGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGA...CACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGTCTCGACTGTCAAAATaGTCTGCGAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMSRLSK*SARCSW
Trigger: CCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGA...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTGCTCTCCAACGAGGCTaGGGTACAACTAGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSALQRG*GTTRGG
Trigger: ACCGCCTCTAGTTGTACCCCAGCCTCGTTGGAGAGC...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCATGTCAGTAGCTCCTTaGAGTCTCCTGTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: YRCLILAIISSCHPRNRIMSVAP*SLLCHW
Trigger: CCAGTGGCACAGGAGACTCCAAGGAGCTACTGACAT...GATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp ATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTGGTCACCATTCTCCTTaGCAGGGAAAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: IPELLPAHKSDLFEWGRSGHHSP*QGKCQS
Trigger: AGATTGACATTTTCCCTGCCAAGGAGAATGGTGACC...ACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp AAAACTAAAAGGGTCAACACTAACAAACACGCCAAGGACGTCCTAACCAACGTGCCTAACCAACGTGGATaGGCCCTAACAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KTKRVNTNKHAKDVLTNVPNQRG*ALTEGP
Trigger: AGGCCCTTCTGTTAGGGCCCATCCACGTTGGTTAGG...CACGTTGGTTAGGACGTCCTTGGCGTGTTTGTTAGTGTTGACCCTTTTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAACACGGCCTGCATGCATaGGATGGGGCAAACAACTCC +
Preference number: 4 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQHGLHA*DGANNS
Trigger: GGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTG...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CTCCTGATGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTCCCCACCAACAAACAACCGAGTTAGTCTGGTaGGATAACCTGAACCTATTT +
Preference number: 4 (lower is better)
Translates to: LLMPKHSAPSKGLPHQQTTELVW*DNLNLF
Trigger: AAATAGGTTCAGGTTATCCCACCAGACTAACTCGGT...TGTTTGTTGGTGGGGAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CAA 72 bp AGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTaGCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RCVCLMRNTVQF*PSSRAGAWRPK
Trigger: TTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
3UTR CAA 72 bp GAAAGTGAAAGGTCTGTCACTTTGAACCCAGTCTACTaGTCCCTGGTCTGTCAGCCAGAAGGTTCTACTGGT +
Preference number: 4 (lower is better)
Translates to: ESERSVTLNPVY*SLVCQPEGSTG
Trigger: ACCAGTAGAACCTTCTGGCTGACAGACCAGGGACAAGTAGACTGGGTTCAAAGTGACAGACCTTTCACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACACAAATTCAGGGTTACTaGTCTGGAAGTGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTQIQGY*SGSGRA
Trigger: AGCCCTTCCACTTCCAGATCAGTAACCCTGAATTTG...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCACTGGGAAAGTAGCCTaGGCCAGGAAATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLTGKVA*ARKFWS
Trigger: TGACCAGAATTTCCTGGCTCAGGCTACTTTCCCAGT...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000609257.5
CDS-3UTR TCA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCTGCTATTTTTAACATaGTCCCCTGTATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGFCLAFTAGIQASGCETLLFLT*SPVSFR
Trigger: CCTGAAAGATACAGGGGATCATGTTAAAAATAGCAG...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp ATCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTCAGGGAAAGCATACTaGGTCTTCTTTGACTTAAAA +
Preference number: 4 (lower is better)
Translates to: IPCIFQAGSCSQPWAMCPSGKAY*VFFDLK
Trigger: TTTTAAGTCAAAGAAGACTCAGTATGCTTTCCCTGA...AGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp CCACCACCTTCTTGTGTATGGGAAAAAGCCACCCTCCTCTCTATGAACTGGGACCACCTTGAGAGGTTTTaGACAATACCTATGCTAAGG +
Preference number: 4 (lower is better)
Translates to: PPPSCVWEKATLLSMNWDHLERF*TIPMLR
Trigger: CCTTAGCATAGGTATTGTTCAAAACCTCTCAAGGTG...GTCCCAGTTCATAGAGAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp ATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGATTCTCTGCTGGGCAATaGTGCAGTGGTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: IFVPSQHSQLWKQSFRKRFSAGQ*CSGPQW
Trigger: CCATTGAGGACCACTGCAGCATTGCCCAGCAGAGAA...TCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAACGTTGCCCTGGTCACTaGTGGTCTCCTCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQRCPGH*WSPQSS
Trigger: ACTACTCTGAGGAGACCAGCAGTGACCAGGGCAACG...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTTVKMV*EMLLGD
Trigger: ATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGT...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR GCA 90 bp GCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGATCTAGCTTCTCACCCTaGCCAGCTGTGGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: ASFLFHPSTANYGNRASGSSFSP*PAVVLK
Trigger: CTTTAAAACCACAGCTGGGCAGGGTGAGAAGCTAGA...TCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAACAGAACCCTTCTCCATaGAGGCCCTACATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FLFHPSTANYGNRASGREQNPSP*RPYIPL
Trigger: CAGAGGAATGTAGGGCCTGCATGGAGAAGGGTTCTG...TTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CTCCTGATGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTCCCCACCAACAAACATGCTCTTTTGGTTTGTaGTGCCAAAATCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LLMPKHSAPSKGLPHQQTCSFGL*CQNQGF
Trigger: AAAACCCTGATTTTGGCAGCACAAACCAAAAGAGCA...TGTTTGTTGGTGGGGAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CTACTGCAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACGCAACAGGCTTTCCCTaGCCAGCTGTGGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LLQNNHLATVSSEHVPCNATGFP*PAVVLK
Trigger: CTTTAAAACCACAGCTGGGCAGGGAAAGCCTGTTGC...GTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS-3UTR CCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTCCCATGGTAAATAACTaGCATCCCATCCGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSPMVNN*HPIRAV
Trigger: GACGGCCCGGATGGGATGCCAGTTATTTACCATGGG...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATGTCATGAAGAGGGCCTaGTTCATCTGCATAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDVMKRA*FICIGL
Trigger: CAAGCCTATGCAGATGAACCAGGCCCTCTTCATGAC...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCTCTCGACTGTCAAAATaGTCTGCGAGATGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSSRLSK*SARCSW
Trigger: CCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGA...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp AATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCCTGGGTCACCATTCTCCTTaGCAGGGAAAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: NHLATVSSEHVPCNRLSLGHHSP*QGKCQS
Trigger: AGATTGACATTTTCCCTGCCAAGGAGAATGGTGACC...CAGGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS-3UTR CCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCCAGCACAGCCAACTATaGAAACAGAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGQHSQL*KQSFRK
Trigger: CTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTG...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCCACCTTCTTGTGTATaGGAAAAAGCCACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDPPSCV*EKATLL
Trigger: GAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGG...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCCACTGGCTGAAGAGTTaGTCTGCTTCTACTGCAGAA +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGHWLKS*SASTAE
Trigger: TTCTGCAGTAGAAGCAGACCAACTCTTCAGCCAGTG...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS-3UTR TCA 90 bp TTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGAGCACTATCGCTGTTTaGTACTGGCTATCATCAGTT +
Preference number: 4 (lower is better)
Translates to: LFHPSTANYGNRASGREGSTIAV*YWLSSV
Trigger: AACTGATGATAGCCAGTATCAAACAGCGATAGTGCT...CCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR GCA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCACAGAGTAGTAGATCTTaGTGCTGGTCAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPQSSRS*CWSEQS
Trigger: ACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTG...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTCCTGAGACAAACTCTGTCTTCTaGTTGGTGCTGTCATACTCA +
Preference number: 4 (lower is better)
Translates to: IIWRLFLVSMSHATGFPETNSVF*LVLSYS
Trigger: TGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGT...CTCAGGAAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TTGGTGCTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAACAAACTCTGTCTTCTaGTTGGTGCTGTCATACTCA +
Preference number: 4 (lower is better)
Translates to: LVLSYSAPATSISTKGHTTNSVF*LVLSYS
Trigger: TGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGT...TGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAGCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp CTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTGTTCTTCAAAGGCACTaGTCTGTATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLFGSSFLSSCLPTNLTSVLQRH*SVSCLQ
Trigger: CTGAAGACAGGATACAGAGCAGTGCCTTTGAAGAAC...AGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR GCA 90 bp GAAGAGTTGGTCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGTTCTTCAAAGGCACTaGTCTGTATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EELVERLHLVVKLMGVQRVLQRH*SVSCLQ
Trigger: CTGAAGACAGGATACAGAGCAGTGCCTTTGAAGAAC...TCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGACCAACTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR GCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCTCTAGCTTCTCACCCTaGCCAGCTGTGGTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLSSFSP*PAVVLK
Trigger: CTTTAAAACCACAGCTGGGCAGGGTGAGAAGCTAGA...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCAAAGAGGGTTGTTCATaGTGTCCGGGCATACTGCAT +
Preference number: 4 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFIKEGCS*CPGILH
Trigger: ATGCAGTATGCCCGGACACCATGAACAACCCTCTTT...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGTGGGCAATGCTGCAGTaGTCCTCAATGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLWAMLQ*SSMDRM
Trigger: CATCCTGTCCATTGAGGACCACTGCAGCATTGCCCA...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGTGCCCTGGTCACTGCTaGTCTCCTCAGAGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLCPGHC*SPQSSR
Trigger: TCTACTACTCTGAGGAGACCAGCAGTGACCAGGGCA...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTGGAACCACTTCTCATTaGAGTGCAGCTCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSGTTSH*SAALCC
Trigger: GCAGCACAGAGCTGCACTCCAATGAGAAGTGGTTCC...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGCTGTCAAGAAGAACTTaGGGGTCCCAGCATCTTGCC +
Preference number: 4 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLLSRRT*GSQHLA
Trigger: GGCAAGATGCTGGGACCCCCAAGTTCTTCTTGACAG...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCAGATGGCATATGAGTTaGGTTCATTCCGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLRWHMS*VHSASA
Trigger: TGCGGAAGCGGAATGAACCCAACTCATATGCCATCT...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp CTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTGGAACTTCTTGCCTTTaGCCTTGTTCACGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LSYSAPATSISTKGHTMPGTSCL*PCSRIS
Trigger: AGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCC...AGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CCA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACACACCATTCTCCTGCTTaGCAGGGAAAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTHHSPA*QGKCQS
Trigger: AGATTGACATTTTCCCTGCCAAGCAGGAGAATGGTG...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244007.7
CDS-3UTR CCA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDISLMA*FLSSIH
Trigger: GTGAATGCTAGACAGAAACCAAGCCATTAATGAGAT...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCGGTCACCATTCTCCTTaGCAGGGAAAATGTCAATCT +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGGHHSP*QGKCQS
Trigger: AGATTGACATTTTCCCTGCCAAGGAGAATGGTGACC...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CCA 90 bp CTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGTCTGACCTCTTTGAATaGGGACGCAGTCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LFGSSFLSSCLPTNLTSLSDLFE*GRSPST
Trigger: TGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGA...CAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR TCA 90 bp TTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCCCATTCCATAGAGAATaGCAAAGCAATGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: LCGVIFVPSQHSQLWKQSPFHRE*QSNVTG
Trigger: ACCAGTCACATTGCTTTGTCATTCTCTATGGAATGG...GCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTATCTTCTCTTCCACGTAGTTTaGTGGGAACCACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CLILAIISSCHPRNRIYLLFHVV*WEPQLL
Trigger: AAGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAG...AAGATAGATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR TCA 90 bp CTACTGCAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACTGCAGTCGATTGTACTaGAGGAACTTCTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLQNNHLATVSSEHVPCNCSRLY*RNFLPL
Trigger: CAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCA...GTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAAACTGGGAAAGTAGCCTaGGCCAGGAAATTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQTGKVA*ARKFWS
Trigger: TGACCAGAATTTCCTGGCTCAGGCTACTTTCCCAGT...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp TTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGCCTTTCAACTGTGTTaGAAGGGCCCAGAGATTTCA +
Preference number: 4 (lower is better)
Translates to: FLFHPSTANYGNRASGREAFQLC*KGPEIS
Trigger: TGAAATCTCTGGGCCCTTTCAACACAGTTGAAAGGC...TTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR TCA 90 bp TGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGCACTATCGCTGTTTaGTACTGGCTATCATCAGTT +
Preference number: 4 (lower is better)
Translates to: CGVIFVPSQHSQLWKQSFSTIAV*YWLSSV
Trigger: AACTGATGATAGCCAGTATCAAACAGCGATAGTGCT...GAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR TCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCTCTGGTGGGATAACCTaGACCTATTTGCTTTCTACC +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLSGGIT*TYLLST
Trigger: GGTAGAAAGCAAATAGGTTCAGGTTATCCCACCAGA...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCACTGAAGGAACTTCTTaGCTTTGGCCTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSTEGTS*LWPCSR
Trigger: ACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTCAGT...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp ATACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAAACTGAAGGAACTTCTTaGCTTTGGCCTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: IHHEAQKGKFRVTDLEVETEGTS*LWPCSR
Trigger: ACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTCAGT...TTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR GCA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAACTGTCTTCTGCTTGGTaGTGTCATACTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQLSSAW*CHTQLQ
Trigger: CTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAG...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCTTTGTGTGTGCTGAATaGTGGCTATGCTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFIFVCAE*WLCYEA
Trigger: TGCCTCATAGCATAGCCAGCATTCAGCACACACAAA...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTACTGCAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACTTTGTGTGTGCTGAATaGTGGCTATGCTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLQNNHLATVSSEHVPCNFVCAE*WLCYEA
Trigger: TGCCTCATAGCATAGCCAGCATTCAGCACACACAAA...GTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGCCCAGAGATTTCAGCTaGCAAGTCCTAGAGGCAATC +
Preference number: 4 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLPRDFS*QVLEAI
Trigger: GATTGCCTCTAGGACTTGGCAGCTGAAATCTCTGGG...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCAGTAGATCTTGCTGCTaGTCAGAACAAAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: YRCLILAIISSCHPRNRISRSCC*SEQSSG
Trigger: CCCACTACTTTGTTCTGACCAGCAGCAAGATCTACT...GATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCTGCACACTTGAAAGTTaGCATAGGGTTTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFICTLES*HRVCLY
Trigger: GTAGAGGCAAACCCTATGCCAACTTTCAAGTGTGCA...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTGTCATGAAGAGGGCCTaGTTCATCTGCATAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSVMKRA*FICIGL
Trigger: CAAGCCTATGCAGATGAACCAGGCCCTCTTCATGAC...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CCA 90 bp TGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTATCTTTCTAGCATTCACTGCTaGAATCCAGGCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLILAIISSCHPRNRIYLSSIHC*NPGFRL
Trigger: CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA...AAGATAGATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp CGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: RLHLVVKLMGVQRASGLGISLMA*FLSSIH
Trigger: GTGAATGCTAGACAGAAACCAAGCCATTAATGAGAT...TCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CCA 90 bp TTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAACAGCACAGCCAACTATaGAAACAGAGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLFHPSTANYGNRASGREQHSQL*KQSFRK
Trigger: CTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTG...TTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CCA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCCTCCTCTCTATGAACTaGGACTGTGAAGCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGLLSMN*DCEAVK
Trigger: TTTTACAGCTTCACAGTCCCAGTTCATAGAGAGGAG...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
3UTR CAA 72 bp ACAACTCCTGTTAGCCCAGAGGAGGGGTTACAGCTCTaGCTGCTTAACCTGAGAAATTTCCAGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: TTPVSPEEGLQL*LLNLRNFQKFP
Trigger: AGGAAATTTCTGGAAATTTCTCAGGTTAAGCAGCAAGAGCTGTAACCCCTCCTCTGGGCTAACAGGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCTGCTATTTTTAACATaGTCCCCTGTATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMLLFLT*SPVSFR
Trigger: CCTGAAAGATACAGGGGATCATGTTAAAAATAGCAG...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR TCA 90 bp TTTTTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGTCACACAAGAACCTaGGCACTATCGCTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: FLCGVIFVPSQHSQLWKQSHTRT*ALSLFD
Trigger: ATCAAACAGCGATAGTGCTCAGGTTCTTGTGTGACT...CTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp GCACTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGTCAAAACATTTGCAGTaGGGCAAAGGCAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: ALSLFDTGYHQFMSSTEPSKHLQ*GKGNVL
Trigger: TAAGACATTGCCTTTGCCTCACTGCAAATGTTTTGA...CGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp AGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTGTGATGGGCTCAAGTTaGAAGACAAGTGAGTGTCTA +
Preference number: 4 (lower is better)
Translates to: RIIIWRLFLVSMSHATGFVMGSS*KTSECL
Trigger: TAGACACTCACTTGTCTTTCAACTTGAGCCCATCAC...AAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp ATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAACTCACATGGTGAGTaGTGGGCTCAAGTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: IFVPSQHSQLWKQSFRKRNSHGE*WAQVER
Trigger: TCTTTCAACTTGAGCCCATCACTCACCATGTGAGTT...TCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp TGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTATCTTTGCTCCTTGATGGTGTaGAGGACATCTGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: CLILAIISSCHPRNRIYLCSLMV*RTSENL
Trigger: CAAGTTCTCAGATGTCCTGCACACCATCAAGGAGCA...AAGATAGATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp CCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTACAAACTCTGTCTTCTaGTTGGTGCTGTCATACTCA +
Preference number: 4 (lower is better)
Translates to: PFWFFIPELLPAHKSDLFTNSVF*LVLSYS
Trigger: TGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGT...AAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR GCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCGCTGAAGAGTTGGTCTaGTTCTACTGCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLAEELV*FYCRII
Trigger: GATTATTCTGCAGTAGAAGCAGACCAACTCTTCAGC...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS-3UTR CCA 90 bp TTTTTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGTGCACACTTGAAAGTTaGCATAGGGTTTGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: FLCGVIFVPSQHSQLWKQCTLES*HRVCLY
Trigger: GTAGAGGCAAACCCTATGCCAACTTTCAAGTGTGCA...CTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGTGCAGAATAATCATCTaGCGACTGTTTCTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGCRIII*RLFLVS
Trigger: GCTCACTAGAAACAGTCGCCAGATGATTATTCTGCA...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000609257.5
CDS-3UTR CCA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCTGCAGAATAATCATCTaGCGACTGTTTCTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GFKATGQCKLCFPGPARLCRIII*RLFLVS
Trigger: GCTCACTAGAAACAGTCGCCAGATGATTATTCTGCA...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000609257.5
3UTR CAA 72 bp CATGTCATCCACGGAACCGGATCTATCTTAAATTTTTaGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: HVIHGTGSILNF*CGVIFVPSQHS
Trigger: GCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAAATTTAAGATAGATCCGGTTCCGTGGATGACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
3UTR CAA 72 bp AAGAAAGTCACACAAGAACCTGAGCACTATCGCTGTTaGATACTGGCTATCATCAGTTCATGTCATCCACGG +
Preference number: 4 (lower is better)
Translates to: KKVTQEPEHYRC*ILAIISSCHPR
Trigger: CCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGCTCAGGTTCTTGTGTGACTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAAGAAAGAGATGGCATATaGGTTGGGTTCATTCCGCTT +
Preference number: 4 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQERDGI*VGFIPL
Trigger: AAGCGGAATGAACCCAACTCATATGCCATCTCTTTC...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp GCACTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGATCTCATTAATGGCTTaGTTTCTGTCTAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: ALSLFDTGYHQFMSSTEPISLMA*FLSSIH
Trigger: GTGAATGCTAGACAGAAACCAAGCCATTAATGAGAT...CGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR TCA 90 bp AAAACTAAAAGGGTCAACACTAACAAACACGCCAAGGACGTCCTAACCAACGTGTATGAACTGGGACTGTaGAGCTGTAAAAGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KTKRVNTNKHAKDVLTNVYELGL*SCKRKS
Trigger: TGACTTTCTTTTACAGCTTCACAGTCCCAGTTCATA...CACGTTGGTTAGGACGTCCTTGGCGTGTTTGTTAGTGTTGACCCTTTTAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR GCA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTCAGAGTAGTAGATCTTaGTGCTGGTCAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSQSSRS*CWSEQS
Trigger: ACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTG...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR GCA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCAGAAATTTCCTACCTaGTTCTACTGCAGAATAATC +
Preference number: 4 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDQKFPT*FYCRII
Trigger: GATTATTCTGCAGTAGAAGCAGGTAGGAAATTTCTG...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCAACATTTGTCAGGTCTaGAGGAATCTTGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: YRCLILAIISSCHPRNRINICQV*RNLEVK
Trigger: TTTCACTTCAAGATTCCTCCAGACCTGACAAATGTT...GATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CCA 90 bp TACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTATCTTAAATTTTTGTTCTTCAGGTCCTTaGCTGATATACGATCCTCAC +
Preference number: 4 (lower is better)
Translates to: YWLSSVHVIHGTGSILNFCSSGP*LIYDPH
Trigger: GTGAGGATCGTATATCAGCCAAGGACCTGAAGAACA...AAAATTTAAGATAGATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS CCA 90 bp AGCCGTTGGCGCAAGGGGACGCGGCGCCCGCCATGGCTCCGACGCTaGGGGCGGCGGCGGCACAGGCCAGGACCGCCCGGGAGCAAGCGC +
Preference number: 5 (lower is better)
Translates to: SRWRKGTRRPPWLRR*GRRRHRPGPPGSKR
Trigger: GCGCTTGCTCCCGGGCGGTCCTGGCCTGTGCCGCCGCCGCCCCCAGCGTCGGAGCCATGGCGGGCGCCGCGTCCCCTTGCGCCAACGGCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000490253.1
CDS-3UTR CAA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTATGGCCCCCTCGATCTaGTCGGCGCCCCGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPMAPSI*SAPRLH
Trigger: GTGGAGCCGGGGCGCCGACAAGATCGAGGGGGCCAT...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp AGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGATGGCCCCCTCGATCTaGTCGGCGCCCCGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RPPQGAASKEPSSRHSTRMAPSI*SAPRLH
Trigger: GTGGAGCCGGGGCGCCGACAAGATCGAGGGGGCCAT...CCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCCATCCCGCATGGTGCTaGGCTGCAGCACGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: EGLIPHGAWLQHVATVPAHPAWC*AAARSH
Trigger: GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATG...GGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCAGGCGGTTGTCTCCATaGACCCGAGTCCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GIQASGCETRKAATGGCFRRLSP*TRVLLG
Trigger: CCCAAGAAGGACTCGGGTCAATGGAGACAACCGCCT...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGGCGTGGTACCACTCTTaGCTCTCGTGGGCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRAWYHS*LSWALV
Trigger: GACCAACGCCCACGAGAGCAAAGAGTGGTACCACGC...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 90 bp TCTTCCGCTCGGGTCGCTGCGACTTCTTGGAGTAGAACAAAGTCATaGCGGTGCCCACCTCGAGGCTGCGGCAGAGGTGCAGCACCTCGG +
Preference number: 5 (lower is better)
Translates to: SSARVAATSWSRTKS*RCPPRGCGRGAAPR
Trigger: CCGAGGTGCTGCACCTCTGCCGCAGCCTCGAGGTGGGCACCGTCATGACTTTGTTCTACTCCAAGAAGTCGCAGCGACCCGAGCGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000490253.1
CDS CCA 90 bp TCCTGCAGCTCCTCCTGTGAGTCGGCAGCAACATCCAGGGACCAGTaGGCCACCGACGCCATGCTGATGGAGAAGACGAAGAGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: SCSSSCESAATSRDQ*ATDAMLMEKTKSRL
Trigger: CAACCGGCTCTTCGTCTTCTCCATCAGCATGGCGTCGGTGGCCCACTGGTCCCTGGATGTTGCTGCCGACTCACAGGAGGAGCTGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000612731.2
CDS-3UTR CAA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTCATCCCGCATGGTGCTaGGCTGCAGCACGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPHPAWC*AAARSH
Trigger: GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATG...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CAGATGTCGGGCCCCCAGCACCTCAATAGAGATGGCACATGGCTCCAGCCCGCGTGGAAGTGGAAGGGCTaGGCTGGCCATACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: QMSGPQHLNRDGTWLQPAWKWKG*AGHTGL
Trigger: CAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCA...CGCGGGCTGGAGCCATGTGCCATCTCTATTGAGGTGCTGGGGGCCCGACATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS TCA 90 bp CTCCGGCTCCAGGGCCACGGGGTTGACCATCTCTTCCACGTAGTTTaGTGGGAACCACAGCTGCTTCTTCCCTCCGTAGTCCCCTCGCCA +
Preference number: 5 (lower is better)
Translates to: LRLQGHGVDHLFHVV*WEPQLLLPSVVPSP
Trigger: TGGCGAGGGGACTACGGAGGGAAGAAGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAGATGGTCAACCCCGTGGCCCTGGAGCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000612731.2
ENST00000617873.4
ENST00000619272.2
CDS TCA 90 bp GGCCACTTCACGGATCTTTTTCACCCAGTCCTGCAGCTCCTCCTGTaGGTCGGCAGCAACATCCAGGGACCAGTGGGCCACCGACGCCAT +
Preference number: 5 (lower is better)
Translates to: GHFTDLFHPVLQLLL*VGSNIQGPVGHRRH
Trigger: ATGGCGTCGGTGGCCCACTGGTCCCTGGATGTTGCTGCCGACTCACAGGAGGAGCTGCAGGACTGGGTGAAAAAGATCCGTGAAGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000612731.2
ENST00000619272.2
CDS-3UTR CAA 90 bp GCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGACAAAGGCATGCTCCTaGATGGTGTGCAGGACATCT +
Preference number: 5 (lower is better)
Translates to: ARPGRPPQGAASKEPSSRTKACS*MVCRTS
Trigger: AGATGTCCTGCACACCATCAAGGAGCATGCCTTTGT...CCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCTCTGTCAAGAAGAACTaGGGGGTCCCAGCATCTTGC +
Preference number: 5 (lower is better)
Translates to: ASGCETRKAATGGCFQRTSVKKN*GVPASC
Trigger: GCAAGATGCTGGGACCCCCAAGTTCTTCTTGACAGA...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCTCTCTTCCACGTAGTTaGATGGGAACCACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GIQASGCETRKAATGGCFSLPRS*MGTTAA
Trigger: AGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAGA...GAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGACGTATTTCTCAGCCTaGGTTTCCGGGAAGGATGAC +
Preference number: 5 (lower is better)
Translates to: ARPGRPPQGAASKEPSSRTYFSA*VSGKDD
Trigger: GTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGT...CCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GAAGGCCTCATCCCGCATGGTGCTTGGCTGCAGCACGTAGCCACAGTGCCTGCCGCTGGCCATACAGGGTaGAGTCCATTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: EGLIPHGAWLQHVATVPAAGHTG*SPLSTT
Trigger: TGTGGTGGACAATGGACTCAACCCTGTATGGCCAGC...GGCAGGCACTGTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATGAGGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS GCA 90 bp GCGTCTGCTGTCTGGGCCACTTCACGGATCTTTTTCACCCAGTCCTaGAGCTCCTCCTGTGAGTCGGCAGCAACATCCAGGGACCAGTGG +
Preference number: 5 (lower is better)
Translates to: ASAVWATSRIFFTQS*SSSCESAATSRDQW
Trigger: CCACTGGTCCCTGGATGTTGCTGCCGACTCACAGGAGGAGCTGCAGGACTGGGTGAAAAAGATCCGTGAAGTGGCCCAGACAGCAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000612731.2
CDS-3UTR CAA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGGGGGTCCCAGCATCTaGCCGGGAGTGGATACGGCA +
Preference number: 5 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRGGPSI*PGVDTA
Trigger: TGCCGTATCCACTCCCGGCAAGATGCTGGGACCCCC...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCGAGATGGCATATGAGTaGGGTTCATTCCGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFEMAYE*GSFRFR
Trigger: GCGGAAGCGGAATGAACCCAACTCATATGCCATCTC...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACTGTCTGGCCCTCTaGCTGGACACGGCAATGCTT +
Preference number: 5 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRHCLAL*LDTAML
Trigger: AAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGTG...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCATGCCTCGGCCATTCTTaGGCAGATGTCGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSCLGHS*ADVGPP
Trigger: TGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCA...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCATGGGCAATGTGCCCTaGTGCTGTGTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRMGNVP*CCVLLL
Trigger: GAGGAGGAGGACACAGCACAAGGGCACATTGCCCAT...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 90 bp AAACAGGGACATCCCCAGTGGTCTCATCCAGCTTCTCATGACCTCTaGCCTGTGGGTCGAGCCCACCTGGGGCGATCCTCACGATTCCGA +
Preference number: 5 (lower is better)
Translates to: KQGHPQWSHPASHDL*PVGRAHLGRSSRFR
Trigger: TCGGAATCGTGAGGATCGCCCCAGGTGGGCTCGACCCACAGGTCAGAGGTCATGAGAAGCTGGATGAGACCACTGGGGATGTCCCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS GCA 90 bp GTTCTGGAGAGCCTCCAGATCCTGCTGGCATCACCTCCAGAGCCCTaGATGCACTGGCTGAAGAGTTGGTCGAGCGTCTGCACTTGGTTG +
Preference number: 5 (lower is better)
Translates to: VLESLQILLASPPEP*MHWLKSWSSVCTWL
Trigger: CAACCAAGTGCAGACGCTCGACCAACTCTTCAGCCAGTGCATGCAGGGCTCTGGAGGTGATGCCAGCAGGATCTGGAGGCTCTCCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630423.1
CDS CCA 90 bp CCCTCAGCCAGCTTCTTGTGCTTGATGAGGATCTTCCTCTTAAGCTaGTTGGGTGAGGGGAGCCCGTCGGCAGAGATCTCCACGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PSASFLCLMRIFLLS*LGEGSPSAEISTGL
Trigger: CAAGCCCGTGGAGATCTCTGCCGACGGGCTCCCCTCACCCAACCAGCTTAAGAGGAAGATCCTCATCAAGCACAAGAAGCTGGCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTTGGCGCGTCTCCAGCTaGACCTGGAAGGTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALWRVSS*TWKVFR
Trigger: GCGGAAGACCTTCCAGGTCAAGCTGGAGACGCGCCA...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGCTGCTGCTGACCTCCTaGGGCTCCTCCTCATCCTCG +
Preference number: 5 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRLLLTS*GSSSSS
Trigger: CGAGGATGAGGAGGAGCCCAAGGAGGTCAGCAGCAG...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ACACGCCAAGGACGTCCTAACCAACGTGGATGGGCCCTAACAGAAGGGCCTACATTGCTCTCGTGGGCGTaGGTCTGTGGGACAGGCTCT +
Preference number: 5 (lower is better)
Translates to: TRQGRPNQRGWALTEGPTLLSWA*VCGTGS
Trigger: AGAGCCTGTCCCACAGACCAACGCCCACGAGAGCAA...TGTAGGCCCTTCTGTTAGGGCCCATCCACGTTGGTTAGGACGTCCTTGGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCGCGTGGTACCACTCTTaGCTCTCGTGGGCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLAWYHS*LSWALV
Trigger: GACCAACGCCCACGAGAGCAAAGAGTGGTACCACGC...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCAAGAGCCGGTTGTTCTaGCCCTCAGGACGGATGGCA +
Preference number: 5 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSKSRLF*PSGRMA
Trigger: TGCCATCCGTCCTGAGGGCAAGAACAACCGGCTCTT...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCAAGACGAAGAGCCGGTaGTTCTTGCCCTCAGGACGG +
Preference number: 5 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSKTKSR*FLPSGR
Trigger: CCGTCCTGAGGGCAAGAACAACCGGCTCTTCGTCTT...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCCGCGGAGGCTGCTCTaGTCAAAGGGGTCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LGFCLAFTAGIQASGCETPRRLL*SKGSKA
Trigger: GGCCTTCGACCCCTTTGACAAGAGCAGCCTCCGCGG...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGTGCCTCGGCCATTCTTaGGCAGATGTCGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRCLGHS*ADVGPP
Trigger: TGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCA...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCTGGAAGTGGAAGGGCTaGGCTGGCCATACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: TGGCFQRTQFAAFYKAHSWKWKG*AGHTGL
Trigger: CAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCA...GCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGAACACAGTACAGTTTTaGCCTTCATCCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWNTVQF*PSSRAG
Trigger: CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTT...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp CACTGTAGGGACACGGCCTGCATGCATGGGATGGGGCAAACAACTCCTGATGCCATGGGCAATGTGCCCTaGTGCTGTGTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HCRDTACMHGMGQTTPDAMGNVP*CCVLLL
Trigger: GAGGAGGAGGACACAGCACAAGGGCACATTGCCCAT...GGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGAGGTCACCATTCTCCTaGGCAGGGAAAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWRSPFS*AGKMSI
Trigger: GATTGACATTTTCCCTGCCAAGGAGAATGGTGACCT...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp GCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCGAGGGGTTACAGCTCTaGCTGCTTAACCTGAGAAAT +
Preference number: 5 (lower is better)
Translates to: ASGCETRKAATGGCFQRTEGLQL*LLNLRN
Trigger: ATTTCTCAGGTTAAGCAGCAAGAGCTGTAACCCCTC...GGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp GAGATGGCACATGGCTCCAGCCCGCGGAGGCTGCTCTTGTCAAAGGGGTCGAAGGCACTGGCTGAAGAGTaGGTCTTGGCAGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: EMAHGSSPRRLLLSKGSKALAEE*VLAGKM
Trigger: CATTTTCCCTGCCAAGACCAACTCTTCAGCCAGTGC...CTTCGACCCCTTTGACAAGAGCAGCCTCCGCGGGCTGGAGCCATGTGCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS TCA 90 bp CCGTCAGCCGCTCTCGGAGGAAGCGCATGTTGGGGACCCGGTAGTTaGCCTGGGACAGCATGTTCTTCAGGTCCTTGGCTGATATACGAT +
Preference number: 5 (lower is better)
Translates to: PSAALGGSACWGPGS*PGTACSSGPWLIYD
Trigger: ATCGTATATCAGCCAAGGACCTGAAGAACATGCTGTCCCAGGTCAACTACCGGGTCCCCAACATGCGCTTCCTCCGAGAGCGGCTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 90 bp CAGCTTCTTGTGCTTGATGAGGATCTTCCTCTTAAGCTGGTTGGGTaGGGGGAGCCCGTCGGCAGAGATCTCCACGGGCTTGGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: QLLVLDEDLPLKLVG*GEPVGRDLHGLGEE
Trigger: CTCCTCACCAAGCCCGTGGAGATCTCTGCCGACGGGCTCCCCTCACCCAACCAGCTTAAGAGGAAGATCCTCATCAAGCACAAGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS GCA 90 bp AGGCTGTCGAACTCCGAGTTCCCTAGCATCACTGTCTGGCCCTCTTaGTGGACACGGCAATGCTTGATCTTGCCCTCAGCCCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: RLSNSEFPSITVWPS*WTRQCLILPSARKE
Trigger: CTCTTTCCGGGCTGAGGGCAAGATCAAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGTGATGCTAGGGAACTCGGAGTTCGACAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS GCA 90 bp CCGAGTCCTTCTTGGGGCCCTTCGTTCTCGACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGATGCGGAAGTCCTCAAACGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PSPSWGPSFSTVKMV*EMLLGDAEVLKRLL
Trigger: CAGCAGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGGGCCCCAAGAAGGACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
ENST00000609821.5
CDS-3UTR CAA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCGCCAGCTTCTTGTGCTaGATGAGGATCTTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFASFLC*MRIFLL
Trigger: TAAGAGGAAGATCCTCATCAAGCACAAGAAGCTGGC...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACGGCAATGCTTGATCTaGCCCTCAGCCCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSRQCLI*PSARKE
Trigger: CTCTTTCCGGGCTGAGGGCAAGATCAAGCATTGCCG...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GTGCCACTGGCTGAGGCAGCCTCTCTCTCCAAGGGGCTTCGGCCATGGTCCTGGAGGAACTTCTTGCCTTaGGCCTTGTTCACGTATTTC +
Preference number: 5 (lower is better)
Translates to: VPLAEAASLSKGLRPWSWRNFLP*ALFTYF
Trigger: GAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCT...CCAGGACCATGGCCGAAGCCCCTTGGAGAGAGAGGCTGCCTCAGCCAGTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCTGCCTCGGCCATTCTTaGGCAGATGTCGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: CEVNGSTESVWPWRGVESCLGHS*ADVGPP
Trigger: TGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCA...GCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCAACTCTGTCTTCTGCTaGGTGCTGTCATACTCAGCT +
Preference number: 5 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFNSVFC*VLSYSA
Trigger: AGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTT...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCAGGCGGTTGTCTCCATaGACCCGAGTCCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LPKNPVRGILQGAQHLLLRRLSP*TRVLLG
Trigger: CCCAAGAAGGACTCGGGTCAATGGAGACAACCGCCT...GAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTAATGTCAGTAGCTCCTaGGAGTCTCCTGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPNVSSS*ESPVPL
Trigger: CAGTGGCACAGGAGACTCCAAGGAGCTACTGACATT...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 90 bp GTACCACTCTTTGCTCTCGTGGGCGTTGGTCTGTGGGACAGGCTCTaGAAGTCGCATCTCAAACTCATTACAGCGCAGGGGCACCTGCTG +
Preference number: 5 (lower is better)
Translates to: VPLFALVGVGLWDRL*KSHLKLITAQGHLL
Trigger: CAGCAGGTGCCCCTGCGCTGTAATGAGTTTGAGATGCGACTTTCAGAGCCTGTCCCACAGACCAACGCCCACGAGAGCAAAGAGTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 90 bp TTGTCTGTCAAGAAGAACTTGGGGGTCCCAGCATCTTGCCGGGAGTaGATACGGCAGTGCTGGACTTTCCCGTTCCGCCAGAAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LSVKKNLGVPASCRE*IRQCWTFPFRQKES
Trigger: GCTCTCTTTCTGGCGGAACGGGAAAGTCCAGCACTGCCGTATCCACTCCCGGCAAGATGCTGGGACCCCCAAGTTCTTCTTGACAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 90 bp AGGTCAACAAGGCTGTCGAACTCCGAGTTCCCTAGCATCACTGTCTaGCCCTCTTGCTGGACACGGCAATGCTTGATCTTGCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RSTRLSNSEFPSITV*PSCWTRQCLILPSA
Trigger: GGCTGAGGGCAAGATCAAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGTGATGCTAGGGAACTCGGAGTTCGACAGCCTTGTTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS-3UTR CAA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGGAAAGCTGGGTCCTCTaGATAGCGATCAAAGTCCCG +
Preference number: 5 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLESWVL*IAIKVP
Trigger: CGGGACTTTGATCGCTATCAAGAGGACCCAGCTTTC...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGTCAGGTACGTGTaGTGCGAGGAGGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDPVRYV*CEEEIQ
Trigger: CTGGATCTCCTCCTCGCACAACACGTACCTGACCGG...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCACCCTACAAAGGCATGCTCCTaGATGGTGTGCAGGACATCT +
Preference number: 5 (lower is better)
Translates to: FLCPGSRAKLQGHLASHPTKACS*MVCRTS
Trigger: AGATGTCCTGCACACCATCAAGGAGCATGCCTTTGT...AGGGTGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGTTCCTCTTAAGCTGGTaGGGTGAGGGGAGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVFLLSW*GEGSPS
Trigger: CGACGGGCTCCCCTCACCCAACCAGCTTAAGAGGAA...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCCACAGGGCCATTCTTGATAGAGTaGCTGATGTCGTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: FTAGIQASGCETRKAATGPFLIE*LMSFSE
Trigger: CTCTGAGAACGACATCAGCAACTCTATCAAGAATGG...CCCTGTGGCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGGCCTGGACCCCGGCCATTCTTGATAGAGTaGCTGATGTCGTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LNAGYAMRHLCAHGPGPRPFLIE*LMSFSE
Trigger: CTCTGAGAACGACATCAGCAACTCTATCAAGAATGG...CCGGGGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGAGATGGCATATGAGTaGGGTTCATTCCGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTEMAYE*GSFRFR
Trigger: GCGGAAGCGGAATGAACCCAACTCATATGCCATCTC...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACTGGACACGGCAATGCTaGATCTTGCCCTCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDWTRQC*ILPSAR
Trigger: CCGGGCTGAGGGCAAGATCAAGCATTGCCGTGTCCA...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCATGCATGGGATGGGGCAAACAACTCCTGATGCCAAAGCATTCGGCCCCAAGTCACTGTCTGGCCCTCTaGCTGGACACGGCAATGCTT +
Preference number: 5 (lower is better)
Translates to: ACMGWGKQLLMPKHSAPSHCLAL*LDTAML
Trigger: AAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGTG...ACTTGGGGCCGAATGCTTTGGCATCAGGAGTTGTTTGCCCCATCCCATGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp TTGGTGCTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACACCGCGGAGGCTGCTCTaGTCAAAGGGGTCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LVLSYSAPATSISTKGHTPRRLL*SKGSKA
Trigger: GGCCTTCGACCCCTTTGACAAGAGCAGCCTCCGCGG...TGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAGCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp TCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCCGGAAGGCCGCGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: SSIHCWNPGFRLRDPEGRGKMSI*ISREAN
Trigger: GTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCC...GCGGCCTTCCGGGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp CACTGTAGGGACACGGCCTGCATGCATGGGATGGGGCAAACAACTCCTGATGCCAATGTCAGTAGCTCCTaGGAGTCTCCTGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: HCRDTACMHGMGQTTPDANVSSS*ESPVPL
Trigger: CAGTGGCACAGGAGACTCCAAGGAGCTACTGACATT...GGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAAATGTCAGTAGCTCCTaGGAGTCTCCTGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: PQGAASKEPSSRHSTRRTNVSSS*ESPVPL
Trigger: CAGTGGCACAGGAGACTCCAAGGAGCTACTGACATT...TGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp CACTGTAGGGACACGGCCTGCATGCATGGGATGGGGCAAACAACTCCTGATGCCTGTGTGGCGTCATTTTaGTTCCATCCCAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: HCRDTACMHGMGQTTPDACVASF*FHPSTA
Trigger: GGCTGTGCTGGGATGGAACAAAAATGACGCCACACA...GGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp ACCCGGAAGGCCGCCACAGGGGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCGAGCACTATCGCTGTTaGATACTGGCTATCATCAGT +
Preference number: 5 (lower is better)
Translates to: TRKAATGGCFQRTQFAAFEHYRC*ILAIIS
Trigger: ACTGATGATAGCCAGTATCAAACAGCGATAGTGCTC...GAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCCCCTGTGGCGGCCTTCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS TCA 90 bp ACAGCCCCCTCACAGCTGTGCCAATCTTCTCCAGTGCCTCCTCGTTaGTGGGATAGCGCAGCTTCATCTTGCGGTATAGCGGGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: TAPSQLCQSSPVPPR*WDSAASSCGIAGVS
Trigger: AGAAACACCCGCTATACCGCAAGATGAAGCTGCGCTATCCCATCAACGAGGAGGCACTGGAGAAGATTGGCACAGCTGTGAGGGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465571.2
CDS CCA 90 bp ACGGGCTTGGTGAGGAGTGTGTCCCCCAGCACCTTCTTGAAGTATTaGGCCATGTTTCTCTGCTGGGCAATGCTGCAGTGGTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: TGLVRSVSPSTFLKY*AMFLCWAMLQWSSM
Trigger: CATTGAGGACCACTGCAGCATTGCCCAGCAGAGAAACATGGCCCAATACTTCAAGAAGGTGCTGGGGGACACACTCCTCACCAAGCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TACATTCCTCTGCCCTGGCTCCAGGGCCAAACTGCAGGGGCATCTAGCTTCTCATGGAACCACTTCTCATaGGAGTGCAGCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: YIPLPWLQGQTAGASSFSWNHFS*ECSSVL
Trigger: CAGCACAGAGCTGCACTCCAATGAGAAGTGGTTCCA...TGAGAAGCTAGATGCCCCTGCAGTTTGGCCCTGGAGCCAGGGCAGAGGAATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTAGGGGGTCCCAGCATCTaGCCGGGAGTGGATACGGCA +
Preference number: 5 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLGGPSI*PGVDTA
Trigger: TGCCGTATCCACTCCCGGCAAGATGCTGGGACCCCC...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCGGCAATGCTTGATCTaGCCCTCAGCCCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDRQCLI*PSARKE
Trigger: CTCTTTCCGGGCTGAGGGCAAGATCAAGCATTGCCG...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ATCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTGGATGATGGCGCTCTaGATGAAGGTCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: IPCIFQAGSCSQPWAMCPWMMAL*MKVSSS
Trigger: GGACGAGCTGACCTTCATCAAGAGCGCCATCATCCA...AGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGCATCCCGCATGGTGCTaGGCTGCAGCACGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: GSSFLSSCLPTNLTSLNGHPAWC*AAARSH
Trigger: GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATG...CCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCTGCTATGAGGCACCTTaGCGCCCACGGGCCTGGACC +
Preference number: 5 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGCYEAP*RPRAWT
Trigger: GGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCA...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 90 bp CGTAGTCAGGCTCAGCTGTGCCAATCTTCTCCAGTGCCTCCTCGTTaGTGGGATAGCGCAGCTTCATCTTGCGGTATAGCGGGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: RSQAQLCQSSPVPPR*WDSAASSCGIAGVS
Trigger: AGAAACACCCGCTATACCGCAAGATGAAGCTGCGCTATCCCATCAACGAGGAGGCACTGGAGAAGATTGGCACAGCTGAGCCTGACTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000617873.4
CDS GCA 90 bp TTCGTTCTCGACTGTCAAAATGGTCTGCGAGATGCTCCTGGGAGATaGGGAAGTCCTCAAACGGCTGCTGGTAGCGGGATTCAAAGGAGC +
Preference number: 5 (lower is better)
Translates to: FVLDCQNGLRDAPGR*GSPQTAAGSGIQRS
Trigger: GCTCCTTTGAATCCCGCTACCAGCAGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000607954.1
ENST00000608689.5
ENST00000609257.5
ENST00000609821.5
CDS GCA 90 bp CACTGGCTGAAGAGTTGGTCTTCGTTCTCGACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGATGCGGAAGTCCTCAAACGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HWLKSWSSFSTVKMV*EMLLGDAEVLKRLL
Trigger: CAGCAGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGACCAACTCTTCAGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608689.5
CDS CCA 90 bp CCTCATACAGGGCCCCGTAGTCAGGCTCCTGGAAACAGGACACAATaGGATATGTTAATGCCCCAGAGCCCAGAGGTAGAAAGCAGCTAC +
Preference number: 5 (lower is better)
Translates to: PHTGPRSQAPGNRTQ*DMLMPQSPEVESSY
Trigger: GTAGCTGCTTTCTACCTCTGGGCTCTGGGGCATTAACATATCCCATTGTGTCCTGTTTCCAGGAGCCTGACTACGGGGCCCTGTATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477870.5
CDS CCA 90 bp CCCACTCCACTCCTGCTTCCAGCCCAGGACTTCTCCTCTTACCTCTaGTCTTGTGTATCCAATTGCCCACTAAGCAGACCCACTTCAACG +
Preference number: 5 (lower is better)
Translates to: PTPLLLPAQDFSSYL*SCVSNCPLSRPTST
Trigger: CGTTGAAGTGGGTCTGCTTAGTGGGCAATTGGATACACAAGACCAGAGGTAAGAGGAGAAGTCCTGGGCTGGAAGCAGGAGTGGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477870.5
ENST00000483175.5
CDS-3UTR CAA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCTGGCGCGTCTCCAGCTaGACCTGGAAGGTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSWRVSS*TWKVFR
Trigger: GCGGAAGACCTTCCAGGTCAAGCTGGAGACGCGCCA...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGCCTGCTGCTGACCTCCTaGGGCTCCTCCTCATCCTCG +
Preference number: 5 (lower is better)
Translates to: CVLNAKHSTVFAFIQSWGLLLTS*GSSSSS
Trigger: CGAGGATGAGGAGGAGCCCAAGGAGGTCAGCAGCAG...GCCCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCACTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGCATCCCGCATGGTGCTaGGCTGCAGCACGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: ALSLFDTGYHQFMSSTEPHPAWC*AAARSH
Trigger: GTGGCTACGTGCTGCAGCCAAGCACCATGCGGGATG...CGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CTACTGCAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACCCGCGGAGGCTGCTCTaGTCAAAGGGGTCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LLQNNHLATVSSEHVPCNPRRLL*SKGSKA
Trigger: GGCCTTCGACCCCTTTGACAAGAGCAGCCTCCGCGG...GTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTCCGCGGAGGCTGCTCTaGTCAAAGGGGTCGAAGGCC +
Preference number: 5 (lower is better)
Translates to: PFWFFIPELLPAHKSDLFPRRLL*SKGSKA
Trigger: GGCCTTCGACCCCTTTGACAAGAGCAGCCTCCGCGG...AAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp TGGTCCTGGCCCCACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGACAGGGTTGAGTCCATaGTCCACCACAAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: WSWPHKMEGSISRSQGQMTGLSP*STTNSV
Trigger: GACAGAGTTTGTGGTGGACAATGGACTCAACCCTGT...CATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGTGGGGCCAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACGCTGGCCATACAGGGTaGAGTCCATTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDAGHTG*SPLSTT
Trigger: TGTGGTGGACAATGGACTCAACCCTGTATGGCCAGC...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCTGCTATGAGGCACCTTaGCGCCCACGGGCCTGGACC +
Preference number: 5 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSCYEAP*RPRAWT
Trigger: GGTCCAGGCCCGTGGGCGCAAAGGTGCCTCATAGCA...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GGGCTGCTTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGTGTCTGTTCCCCAGGTaGTGTTCCAGAAAGACACTT +
Preference number: 5 (lower is better)
Translates to: GLLPKNPVRGILQGAQHLCLFPR*CSRKTL
Trigger: AAGTGTCTTTCTGGAACACAACCTGGGGAACAGACA...CAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp AGGTTTGTGTGTGCTGAATGCTGGCTATGCTATGAGGCACCTTTGCGCCCACGGTTGAACCCAGTCTACTaGTCCCTGGTCTGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RFVCAECWLCYEAPLRPRLNPVY*SLVCQP
Trigger: TGGCTGACAGACCAGGGACAAGTAGACTGGGTTCAA...CCGTGGGCGCAAAGGTGCCTCATAGCATAGCCAGCATTCAGCACACACAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCGGCCTTGGAGAGGGGTaGAGAGCCTCCTTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LGFCLAFTAGIQASGCETGLGEG*RASFLV
Trigger: AACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCC...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS TCA 90 bp GTCCGGCCGGAAAGCTGGGTCCTCTTGATAGCGATCAAAGTCCCGTaGGGTCTTCCCTGGGCGGATCTCCTTAATTTCACGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: VRPESWVLLIAIKVP*GLPWADLLNFTNVN
Trigger: ATTGACATTCGTGAAATTAAGGAGATCCGCCCAGGGAAGACCTCACGGGACTTTGATCGCTATCAAGAGGACCCAGCTTTCCGGCCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS TCA 90 bp TTTGGCCTTGTTCACGTATTTCTCAGCCTTGGTTTCCGGGAAGGATaGCATGTCCCGGTAGCAAGCACGTTCTGTGCCAATCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FGLVHVFLSLGFREG*HVPVASTFCANLWA
Trigger: GGCCCAGAGATTGGCACAGAACGTGCTTGCTACCGGGACATGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461641.5
CDS TCA 90 bp GACCCGGTAGTTGACCTGGGACAGCATGTTCTTCAGGTCCTTGGCTaGTATACTGAGAAAACAGGGACATCCCCAGTGGTCTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: DPVVDLGQHVLQVLG*YTEKTGTSPVVSSS
Trigger: GCTGGATGAGACCACTGGGGATGTCCCTGTTTTCTCAGTATATCAGCCAAGGACCTGAAGAACATGCTGTCCCAGGTCAACTACCGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS TCA 90 bp TTTGGCCTTGTTCACGTATTTCTCAGCCTTGGTTTCCGGGAAGGATaGCATGTCCCGGTAGCAAGCACGTTCTGTGCCAATCTCCTGGCG +
Preference number: 5 (lower is better)
Translates to: FGLVHVFLSLGFREG*HVPVASTFCANLLA
Trigger: CGCCAGGAGATTGGCACAGAACGTGCTTGCTACCGGGACATGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS GCA 90 bp TGCAGTCTGTCTGACCTGCCTTTCCTGGGCTCCTTTCCTCGCCCATaGCTTCTCATATGGAGCTTCTCAATCCATCCCAAGTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CSLSDLPFLGSFPRP*LLIWSFSIHPKFSS
Trigger: GGAAGAGAACTTGGGATGGATTGAGAAGCTCCATATGAGAAGGCATGGGCGAGGAAAGGAGCCCAGGAAAGGCAGGTCAGACAGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS GCA 90 bp CTACAAAGGCTCTGCTTTTGCCATTCCAGACTCCCTGCTGCCCACTaGCATCTAATGCCAGCCATGCTGCTGATGCAGCTCAAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: LQRLCFCHSRLPAAH*HLMPAMLLMQLKSL
Trigger: GAGACTTTTGAGCTGCATCAGCAGCATGGCTGGCATTAGATGGCAGTGGGCAGCAGGGAGTCTGGAATGGCAAAAGCAGAGCCTTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS CCA 90 bp TGGGATATGTTAATGCCCCAGAGCCCAGAGGTAGAAAGCAGCTACTaGTTTCTGGAGCAGCTTCCCTTTCCCCCAGTGCAGCAAACTTGC +
Preference number: 5 (lower is better)
Translates to: WDMLMPQSPEVESSY*FLEQLPFPPVQQTC
Trigger: GCAAGTTTGCTGCACTGGGGGAAAGGGAAGCTGCTCCAGAAACCAGTAGCTGCTTTCTACCTCTGGGCTCTGGGGCATTAACATATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477870.5
CDS CCA 90 bp GACCTGCCTTTCCTGGGCTCCTTTCCTCGCCCATGCCTTCTCATATaGAGCTTCTCAATCCATCCCAAGTTCTCTTCCTATGCGACACCA +
Preference number: 5 (lower is better)
Translates to: DLPFLGSFPRPCLLI*SFSIHPKFSSYATP
Trigger: TGGTGTCGCATAGGAAGAGAACTTGGGATGGATTGAGAAGCTCCATATGAGAAGGCATGGGCGAGGAAAGGAGCCCAGGAAAGGCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS-3UTR CAA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCATCCTCAGATGTGGCTaGCAGGCTCAGCGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: LGFCLAFTAGIQASGCETILRCG*QAQRFQ
Trigger: CTGAAAACGCTGAGCCTGCAAGCCACATCTGAGGAT...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACATCCTCAGATGTGGCTaGCAGGCTCAGCGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDILRCG*QAQRFQ
Trigger: CTGAAAACGCTGAGCCTGCAAGCCACATCTGAGGAT...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACTGGAACCACTTCTCATaGGAGTGCAGCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AWFLSSIHCWNPGFRLRDWNHFS*ECSSVL
Trigger: CAGCACAGAGCTGCACTCCAATGAGAAGTGGTTCCA...GTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCCTTCATCCAGAGCTGGGGCATGGAGGCCCAAAACAGTAATAACATCTCATTATTGCTCTCGTGGGCGTaGGTCTGTGGGACAGGCTCT +
Preference number: 5 (lower is better)
Translates to: AFIQSWGMEAQNSNNISLLLSWA*VCGTGS
Trigger: AGAGCCTGTCCCACAGACCAACGCCCACGAGAGCAA...TAATGAGATGTTATTACTGTTTTGGGCCTCCATGCCCCAGCTCTGGATGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGAAGAGCCGGTTGTTCTaGCCCTCAGGACGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LFHPSTANYGNRASGREGKSRLF*PSGRMA
Trigger: TGCCATCCGTCCTGAGGGCAAGAACAACCGGCTCTT...CCCTTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CAA 90 bp ATACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAATGCCTCGGCCATTCTTaGGCAGATGTCGGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: IHHEAQKGKFRVTDLEVECLGHS*ADVGPP
Trigger: TGGGGGCCCGACATCTGCCAAAGAATGGCCGAGGCA...TTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp GGCCACAAGCTGACTGCCACAGATCCACATGGGCAAAGGATCGTAGTTGGAGGAACAGGGTTGAGTCCATaGTCCACCACAAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: GHKLTATDPHGQRIVVGGTGLSP*STTNSV
Trigger: GACAGAGTTTGTGGTGGACAATGGACTCAACCCTGT...TCCTCCAACTACGATCCTTTGCCCATGTGGATCTGTGGCAGTCAGCTTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS GCA 90 bp TGGGAAAGAGGGTTGTTCATGGTGTCCGGGCATACTGCATCCAGCTaGGAGTTCCACACACTGTTCTCTTTGGAGAACAGGAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: WERGLFMVSGHTASS*EFHTLFSLENRKVT
Trigger: TGTCACCTTCCTGTTCTCCAAAGAGAACAGTGTGTGGAACTCGCAGCTGGATGCAGTATGCCCGGACACCATGAACAACCCTCTTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000470528.1
ENST00000492148.5
CDS GCA 90 bp CGTTGCCCTGGTCACTGCTGGTCTCCTCAGAGTAGTAGATCTTGCTaGTGGTCAGAACAAAGTAGTGGGGATACCATTCGTGGTTCACAG +
Preference number: 5 (lower is better)
Translates to: RCPGHCWSPQSSRSC*WSEQSSGDTIRGSQ
Trigger: CTGTGAACCACGAATGGTATCCCCACTACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTGACCAGGGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS GCA 90 bp CCTCGTTGCCCTGGTCACTGCTGGTCTCCTCAGAGTAGTAGATCTTaGTGCTGGTCAGAACAAAGTAGTGGGGATACCATTCGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: PRCPGHCWSPQSSRS*CWSEQSSGDTIRGS
Trigger: TGAACCACGAATGGTATCCCCACTACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTGACCAGGGCAACGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS GCA 90 bp CCTTCTCATATGGAGCTTCTCAATCCATCCCAAGTTCTCTTCCTATaGGACACCACCTCATCCCTTCTATGCCTCAGCCCCCACTCCACT +
Preference number: 5 (lower is better)
Translates to: PSHMELLNPSQVLFL*DTTSSLLCLSPHST
Trigger: AGTGGAGTGGGGGCTGAGGCATAGAAGGGATGAGGTGGTGTCGCATAGGAAGAGAACTTGGGATGGATTGAGAAGCTCCATATGAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS CCA 90 bp TGCCCTGGTCACTGCTGGTCTCCTCAGAGTAGTAGATCTTGCTGCTaGTCAGAACAAAGTAGTGGGGATACCATTCGTGGTTCACAGGGT +
Preference number: 5 (lower is better)
Translates to: CPGHCWSPQSSRSCC*SEQSSGDTIRGSQG
Trigger: ACCCTGTGAACCACGAATGGTATCCCCACTACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTGACCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS-3UTR CAA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATTTCCTCTTAAGCTGGTaGGGTGAGGGGAGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDFLLSW*GEGSPS
Trigger: CGACGGGCTCCCCTCACCCAACCAGCTTAAGAGGAA...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCTGGACACGGCAATGCTaGATCTTGCCCTCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFIWTRQC*ILPSAR
Trigger: CCGGGCTGAGGGCAAGATCAAGCATTGCCGTGTCCA...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCTCTCTTCCACGTAGTTaGATGGGAACCACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGFCLAFTAGIQASGCETSLPRS*MGTTAA
Trigger: AGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAGA...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTCCAAAGAACCCAGTTCGCGGCATTCTACAAGGCGCACAGCACCTGCTGCTCTAACTCTGTCTTCTGCTaGGTGCTGTCATACTCAGCT +
Preference number: 5 (lower is better)
Translates to: FQRTQFAAFYKAHSTCCSNSVFC*VLSYSA
Trigger: AGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTT...AGAGCAGCAGGTGCTGTGCGCCTTGTAGAATGCCGCGAACTGGGTTCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGACAGGGTTGAGTCCATaGTCCACCACAAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: ALGCEVNGSTESVWPWRGTGLSP*STTNSV
Trigger: GACAGAGTTTGTGGTGGACAATGGACTCAACCCTGT...CCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp GGGCTTGGCTGGCCATACAGGGTTGAGTCCATTGTCCACCACAAACTCTGTCTTGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GLGWPYRVESIVHHKLCLGKMSI*ISREAN
Trigger: GTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCC...AAGACAGAGTTTGTGGTGGACAATGGACTCAACCCTGTATGGCCAGCCAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp CTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGACCGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: LGFCLAFTAGIQASGCETGKMSI*ISREAN
Trigger: GTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCC...GGTCTCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp AGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: STESVWPWRGVESLLFGSGKMSI*ISREAN
Trigger: GTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCC...AGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR CAA 90 bp TCCCCTGTATCTTTCAGGCTGGGTCATGTTCCCAGCCATGGGCAATGTGCCCTTAGGTCACCATTCTCCTaGGCAGGGAAAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: SPVSFRLGHVPSHGQCALRSPFS*AGKMSI
Trigger: GATTGACATTTTCCCTGCCAAGGAGAATGGTGACCT...AAGGGCACATTGCCCATGGCTGGGAACATGACCCAGCCTGAAAGATACAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCAGGAAAGGGGCTCTGGTaGTTTCCAGCTCACCACCAA +
Preference number: 5 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPGKGLW*FPAHHQ
Trigger: TTGGTGGTGAGCTGGAAACAACCAGAGCCCCTTTCC...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CACTGTAGGGACACGGCCTGCATGCATGGGATGGGGCAAACAACTCCTGATGCCCTTGTAGGCTCTACTTaGTATGTGTACATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: HCRDTACMHGMGQTTPDALVGST*YVYMSA
Trigger: AGCAGACATGTACACATACAAAGTAGAGCCTACAAG...GGCATCAGGAGTTGTTTGCCCCATCCCATGCATGCAGGCCGTGTCCCTACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp TCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGGCCTTGGAGAGGGGTaGAGAGCCTCCTTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: SSFLSSCLPTNLTSLNGDGLGEG*RASFLV
Trigger: AACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCC...GTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS TCA 90 bp CTTGCAGGCTCAGCGTTTTCAGGCGAAATTCCATTCCATAGAGAATaGCAAAGCAATGTGACTGGTCCGGCCGGAAAGCTGGGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LAGSAFSGEIPFHRE*QSNVTGPAGKLGPL
Trigger: AAGAGGACCCAGCTTTCCGGCCGGACCAGTCACATTGCTTTGTCATTCTCTATGGAATGGAATTTCGCCTGAAAACGCTGAGCCTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS TCA 90 bp GTGTGGGTGCCTGCAATGTATCCTCCATCAGCCAAGTTAAGCCCTTaGTCCACATGTTCACTTCATCCTCAGATGTGGCTTGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: VWVPAMYPPSAKLSP*STCSLHPQMWLAGS
Trigger: TGAGCCTGCAAGCCACATCTGAGGATGAAGTGAACATGTGGATCAAGGGCTTAACTTGGCTGATGGAGGATACATTGCAGGCACCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
CDS GCA 90 bp GGTAGATGCGGGAGAGCTGCAGTCGATTGTACTGAAGGAACTTCTTaGCTTTGGCCTTGTTCACGTATTTCTCAGCCTTGGTTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: GRCGRAAVDCTEGTS*LWPCSRISQPWFPG
Trigger: TCCCGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCAGCTCTCCCGCATCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000599785.5
ENST00000608689.5
CDS CCA 90 bp GAAGGAACTTCTTGCCTTTGGCCTTGTTCACGTATTTCTCAGCCTTaGTTTCCGGGAAGGATGACATGTCCCGGTAGCAAGCACGTTCTG +
Preference number: 5 (lower is better)
Translates to: EGTSCLWPCSRISQP*FPGRMTCPGSKHVL
Trigger: CAGAACGTGCTTGCTACCGGGACATGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000599785.5
CDS CCA 90 bp TGCGGGAGAGCTGCAGTCGATTGTACTGAAGGAACTTCTTGCCTTTaGCCTTGTTCACGTATTTCTCAGCCTTGGTTTCCGGGAAGGATG +
Preference number: 5 (lower is better)
Translates to: CGRAAVDCTEGTSCL*PCSRISQPWFPGRM
Trigger: CATCCTTCCCGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCAGCTCTCCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000599785.5
ENST00000608689.5
CDS-3UTR CAA 90 bp TCCTCCTCCTCCTCCACTCTTAGGAATGTCAGTAGCTCCTTGGAGTCTCCTGTGCACACACTGTTCTCTTaGGAGAACAGGAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SSSSSTLRNVSSSLESPVHTLFS*ENRKVT
Trigger: TGTCACCTTCCTGTTCTCCAAAGAGAACAGTGTGTG...CACAGGAGACTCCAAGGAGCTACTGACATTCCTAAGAGTGGAGGAGGAGGAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTTTTGTGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGCCGGTCAGGTACGTGTaGTGCGAGGAGGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: FLCGVIFVPSQHSQLWKQPVRYV*CEEEIQ
Trigger: CTGGATCTCCTCCTCGCACAACACGTACCTGACCGG...CTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CCACCACCTTCTTGTGTATGGGAAAAAGCCACCCTCCTCTCTATGAACTGGGACTCTGAGAACTTGATCTaGGTGGTAAGGGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: PPPSCVWEKATLLSMNWDSENLI*VVRVCP
Trigger: TGGGCACACCCTTACCACCAAGATCAAGTTCTCAGA...GTCCCAGTTCATAGAGAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp AGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTAACTCTGTCTTCTGCTaGGTGCTGTCATACTCAGCT +
Preference number: 5 (lower is better)
Translates to: STESVWPWRGVESLLFGSNSVFC*VLSYSA
Trigger: AGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTT...AGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCTGGAAGTGGAAGGGCTaGGCTGGCCATACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: GFKATGQCKLCFPGPARLWKWKG*AGHTGL
Trigger: CAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCA...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTTGGAAGTGGAAGGGCTaGGCTGGCCATACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: PFWFFIPELLPAHKSDLFWKWKG*AGHTGL
Trigger: CAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCA...AAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRGKMSI*ISREAN
Trigger: GTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCC...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGAGGCGGTTGTCTCCATaGACCCGAGTCCTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGRRLSP*TRVLLG
Trigger: CCCAAGAAGGACTCGGGTCAATGGAGACAACCGCCT...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp CTCCTGATGCCAAAGCATTCGGCCCCAAGTAAGGGTCTTCCCCACCAACAAACAAACACAGTACAGTTTTaGCCTTCATCCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLMPKHSAPSKGLPHQQTNTVQF*PSSRAG
Trigger: CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTT...TGTTTGTTGGTGGGGAAGACCCTTACTTGGGGCCGAATGCTTTGGCATCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp AGCTGCCTTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGACCACCCACCACCTTCTaGTGTATGGGAAAAAGCCAC +
Preference number: 5 (lower is better)
Translates to: SCLKKGRAVCSPGCVPERPPTTF*CMGKSH
Trigger: GTGGCTTTTTCCCATACACAAGAAGGTGGTGGGTGG...TCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAAGGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAGCCTGCTCTTTTGGTTaGTGCTGCCAAAATCAGGGT +
Preference number: 5 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRACSFG*CCQNQG
Trigger: ACCCTGATTTTGGCAGCACAAACCAAAAGAGCAGGC...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp GCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGGACAAATCTGACCTCTTaGAATGGGGACGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: ASALGCEVNGSTESVWPWTNLTS*NGDAVL
Trigger: AAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGT...CCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTGCAGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR CAA 90 bp TTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCACAAATCTGACCTCTTaGAATGGGGACGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: FLSSCLPTNLTSLNGDAVTNLTS*NGDAVL
Trigger: AAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGT...GACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS-3UTR CAA 90 bp ATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTTTCATTCCTGAGCTCTaGCCTGCCCACAAATCTGAC +
Preference number: 5 (lower is better)
Translates to: IPELLPAHKSDLFEWGRSFIPEL*PAHKSD
Trigger: GTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAA...ACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000607954.1
ENST00000608885.5
CDS TCA 90 bp TTTGGCCTTGTTCACGTATTTCTCAGCCTTGGTTTCCGGGAAGGATaGCATGTCCCGGTAGCAAGCACGTTCTGTGCCAATCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FGLVHVFLSLGFREG*HVPVASTFCANLLF
Trigger: GAAGAGAAGATTGGCACAGAACGTGCTTGCTACCGGGACATGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CCACCACCTTCTTGTGTATGGGAAAAAGCCACCCTCCTCTCTATGAACTGGGACCACACACTGTTCTCTTaGGAGAACAGGAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: PPPSCVWEKATLLSMNWDHTLFS*ENRKVT
Trigger: TGTCACCTTCCTGTTCTCCAAAGAGAACAGTGTGTG...GTCCCAGTTCATAGAGAGGAGGGTGGCTTTTTCCCATACACAAGAAGGTGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CTATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATTGGATGATGGCGCTCTaGATGAAGGTCAGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LSLFDTGYHQFMSSTEPDWMMAL*MKVSSS
Trigger: GGACGAGCTGACCTTCATCAAGAGCGCCATCATCCA...ATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp ATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAAGAGCCGGTTGTTCTaGCCCTCAGGACGGATGGCA +
Preference number: 5 (lower is better)
Translates to: IFVPSQHSQLWKQSFRKRKSRLF*PSGRMA
Trigger: TGCCATCCGTCCTGAGGGCAAGAACAACCGGCTCTT...TCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CAA 90 bp AGCTGCCTTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGAACGTATTTCTCAGCCTaGGTTTCCGGGAAGGATGAC +
Preference number: 5 (lower is better)
Translates to: SCLKKGRAVCSPGCVPERTYFSA*VSGKDD
Trigger: GTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGT...TCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAAGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp TGCTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCACGTATTTCTCAGCCTaGGTTTCCGGGAAGGATGAC +
Preference number: 5 (lower is better)
Translates to: CCHTQLQPPQSPQKDTQCTYFSA*VSGKDD
Trigger: GTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGT...GCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGATTCTTGCCTTTGGCCTaGTTCACGTATTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRFLPLA*FTYFSA
Trigger: GGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAA...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TCAGGGTTACTGATCTGGAAGTGGAAGGGCTTGGCTGGCCATACAGGGTTGAGTAGGAACTTCTTGCCTTaGGCCTTGTTCACGTATTTC +
Preference number: 5 (lower is better)
Translates to: SGLLIWKWKGLAGHTGLSRNFLP*ALFTYF
Trigger: GAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCT...ACTCAACCCTGTATGGCCAGCCAAGCCCTTCCACTTCCAGATCAGTAACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp CTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGGCTGGCCATACAGGGTaGAGTCCATTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: LFGSSFLSSCLPTNLTSLAGHTG*SPLSTT
Trigger: TGTGGTGGACAATGGACTCAACCCTGTATGGCCAGC...CAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp ATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGCGAAACACAGTACAGTTTTaGCCTTCATCCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: MAWFLSSIHCWNPGFRLRNTVQF*PSSRAG
Trigger: CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTT...TCGCAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGAATGTCAGTAGCTCCTaGGAGTCTCCTGTGCCACTG +
Preference number: 5 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMNVSSS*ESPVPL
Trigger: CAGTGGCACAGGAGACTCCAAGGAGCTACTGACATT...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
CDS-3UTR CAA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGTCTGTCAAGAAGAACTaGGGGGTCCCAGCATCTTGC +
Preference number: 5 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGSVKKN*GVPASC
Trigger: GCAAGATGCTGGGACCCCCAAGTTCTTCTTGACAGA...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CAACTCCTCAATCCCTTTTTCATTCCTCAGGGAAAGCATACTGAGTCTTCTTTGAAGACGAAGAGCCGGTaGTTCTTGCCCTCAGGACGG +
Preference number: 5 (lower is better)
Translates to: QLLNPFFIPQGKHTESSLKTKSR*FLPSGR
Trigger: CCGTCCTGAGGGCAAGAACAACCGGCTCTTCGTCTT...CAAAGAAGACTCAGTATGCTTTCCCTGAGGAATGAAAAAGGGATTGAGGAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CTGTCATACTCAGCTCCAGCCACCTCAATCTCCACAAAAGGACACACAATGCCTTTCTTGCCTTTGGCCTaGTTCACGTATTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LSYSAPATSISTKGHTMPFLPLA*FTYFSA
Trigger: GGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAA...AGGCATTGTGTGTCCTTTTGTGGAGATTGAGGTGGCTGGAGCTGAGTATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp TGTGGCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCACAGGGTTGAGTCCATaGTCCACCACAAACTCTGTC +
Preference number: 5 (lower is better)
Translates to: CGVIFVPSQHSQLWKQSFTGLSP*STTNSV
Trigger: GACAGAGTTTGTGGTGGACAATGGACTCAACCCTGT...GAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp GCTGAAGAGTTGGTCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAACACAGTACAGTTTTaGCCTTCATCCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: AEELVERLHLVVKLMGVQNTVQF*PSSRAG
Trigger: CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTT...CTGTACTCCCATTAACTTCACAACCAAGTGCAGACGCTCGACCAACTCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CAA 90 bp GCGTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAGGCCTTTCAACTGTGTaGAAAGGGCCCAGAGATTTC +
Preference number: 5 (lower is better)
Translates to: ASFLFHPSTANYGNRASGGLSTV*KGPRDF
Trigger: GAAATCTCTGGGCCCTTTCAACACAGTTGAAAGGCC...TCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CAA 90 bp TATCGCTGTTTGATACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTGTGTGGCGTCATTTTaGTTCCATCCCAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: YRCLILAIISSCHPRNRICVASF*FHPSTA
Trigger: GGCTGTGCTGGGATGGAACAAAAATGACGCCACACA...GATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTATCAAACAGCGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CAA 90 bp GTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGGCCCTGCCTGCTCTTTaGGTTTGTGCTGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: VIFVPSQHSQLWKQSFRKALPAL*VCAAKI
Trigger: GATTTTGGCAGCACAAACCAAAAGAGCAGGCAGGGC...CTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp CATTGTCCACCACAAACTCTGTCTTCTGCTTGGTGCTGTCATACTCAGCTCCAGGCTGAAGAGTTGGTCTaGGCAGGGAAAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: HCPPQTLSSAWCCHTQLQAEELV*AGKMSI
Trigger: GATTGACATTTTCCCTGCCAAGACCAACTCTTCAGC...CTGGAGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTTTGTGGTGGACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS TCA 90 bp CGTTTTCAGGCGAAATTCCATTCCATAGAGAATGACAAAGCAATGTaGCTGGTCCGGCCGGAAAGCTGGGTCCTCTTGATAGCGATCAAA +
Preference number: 5 (lower is better)
Translates to: RFQAKFHSIENDKAM*LVRPESWVLLIAIK
Trigger: TTTGATCGCTATCAAGAGGACCCAGCTTTCCGGCCGGACCAGTCACATTGCTTTGTCATTCTCTATGGAATGGAATTTCGCCTGAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS-3UTR CAA 90 bp CAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCTCTGAGAACTTGATCTaGGTGGTAAGGGTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: QGQMCVLNAKHSTVFAFISENLI*VVRVCP
Trigger: TGGGCACACCCTTACCACCAAGATCAAGTTCTCAGA...GATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCCTCCAGGACATCTGAGAACTaGATCTTGGTGGTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LKLQDNVNFVSLAQQGSSRTSEN*ILVVRV
Trigger: CACCCTTACCACCAAGATCAAGTTCTCAGATGTCCT...GGAGGAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CCTGACAGTGCCTTACATCACAAACTAAGTCCTCTTAACACAGCAGGCAGCCCAGAGTCAAAGACGAGGTaGTCTGTCAAGAAGAACTTG +
Preference number: 5 (lower is better)
Translates to: PDSALHHKLSPLNTAGSPESKTR*SVKKNL
Trigger: CAAGTTCTTCTTGACAGACAACCTCGTCTTTGACTC...TGGGCTGCCTGCTGTGTTAAGAGGACTTAGTTTGTGATGTAAGGCACTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ACAAGATGGAAGGATCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGTTCTTGCCTTTGGCCTaGTTCACGTATTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TRWKDPSPEVRARCVCLMFLPLA*FTYFSA
Trigger: GGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAA...CATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGATCCTTCCATCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTGCTGGCCATACAGGGTaGAGTCCATTGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSAGHTG*SPLSTT
Trigger: TGTGGTGGACAATGGACTCAACCCTGTATGGCCAGC...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGTCACCATTCTCCTGCTaGGCAGGGAAAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: LMAWFLSSIHCWNPGFRLSPFSC*AGKMSI
Trigger: GATTGACATTTTCCCTGCCAAGCAGGAGAATGGTGA...CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244007.7
CDS-3UTR CAA 90 bp GTCATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGGGCCTTTCAACTGTGTaGAAAGGGCCCAGAGATTTC +
Preference number: 5 (lower is better)
Translates to: VIFVPSQHSQLWKQSFRKGLSTV*KGPRDF
Trigger: GAAATCTCTGGGCCCTTTCAACACAGTTGAAAGGCC...CTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CAA 90 bp CACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTTTCCTTTCATTCCTGAGCTCTaGCCTGCCCACAAATCTGAC +
Preference number: 5 (lower is better)
Translates to: HKSDLFEWGRSPSTEKFPFIPEL*PAHKSD
Trigger: GTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAA...AGGAAACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607954.1
CDS-3UTR CAA 90 bp AGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTGCACTGGCTGAAGAGTaGGTCTGCTTCTACTGCAGA +
Preference number: 5 (lower is better)
Translates to: RIIIWRLFLVSMSHATGFALAEE*VCFYCR
Trigger: TCTGCAGTAGAAGCAGACCAACTCTTCAGCCAGTGC...AAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609257.5
CDS CCA 90 bp TTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATaGGGACGCAGTCCTTCAACAGAGAAGTTTCTATGGCAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: FIPELLPAHKSDLFE*GRSPSTEKFLWQRS
Trigger: ACTTCTTTGCCATAGAAACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423733.3
CDS CCA 90 bp CTGCATTCCAGAGCCTGGGTTACAGAGCGAGATCCTGGTTTCTCATaGCTTTCTCAGCCAGCTGCAATTAAGGACCATTTCTTTATGAAT +
Preference number: 5 (lower is better)
Translates to: LHSRAWVTERDPGFS*LSQPAAIKDHFFMN
Trigger: ATTCATAAAGAAATGGTCCTTAATTGCAGCTGGCTGAGAAAGCCATGAGAAACCAGGATCTCGCTCTGTAACCCAGGCTCTGGAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630423.1
CDS-3UTR CAA 90 bp TCCATCTCCAGAAGTCAGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAAGCCAAGTTAAGCCCTaGATCCACATGTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: SISRSQGQMCVLNAKHSTSQVKP*IHMFTS
Trigger: TGAAGTGAACATGTGGATCAAGGGCTTAACTTGGCT...TGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCTGACTTCTGGAGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTAATGGCTTGGTTTCTGTCTAGCATTCACTGCTGGAATCCAGGCTTCAGGCTGATGTTCTTCAGGTCCTaGGCTGATATACGATCCTCA +
Preference number: 5 (lower is better)
Translates to: LMAWFLSSIHCWNPGFRLMFFRS*ADIRSS
Trigger: TGAGGATCGTATATCAGCCAAGGACCTGAAGAACAT...CAGCCTGAAGCCTGGATTCCAGCAGTGAATGCTAGACAGAAACCAAGCCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp TTAAGAAAGGCAGAGCTGTCTGTTCCCCAGGTTGTGTTCCAGAAAGACACTTGTAGGACATCTGAGAACTaGATCTTGGTGGTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LRKAELSVPQVVFQKDTCRTSEN*ILVVRV
Trigger: CACCCTTACCACCAAGATCAAGTTCTCAGATGTCCT...ACAAGTGTCTTTCTGGAACACAACCTGGGGAACAGACAGCTCTGCCTTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCGCCAGCTTCTTGTGCTaGATGAGGATCTTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: GFKATGQCKLCFPGPARLASFLC*MRIFLL
Trigger: TAAGAGGAAGATCCTCATCAAGCACAAGAAGCTGGC...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp ATTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGATCTCTTCCACGTAGTTaGATGGGAACCACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: IFVPSQHSQLWKQSFRKRSLPRS*MGTTAA
Trigger: AGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAGA...TCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CAA 90 bp TACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTATCTTAAATTTTAAGACGAAGAGCCGGTaGTTCTTGCCCTCAGGACGG +
Preference number: 5 (lower is better)
Translates to: YWLSSVHVIHGTGSILNFKTKSR*FLPSGR
Trigger: CCGTCCTGAGGGCAAGAACAACCGGCTCTTCGTCTT...AAAATTTAAGATAGATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS-3UTR CAA 90 bp ATACACCACGAAGCGCAGAAAGGCAAATTCAGGGTTACTGATCTGGAAGTGGAAAACTCTGTCTTCTGCTaGGTGCTGTCATACTCAGCT +
Preference number: 5 (lower is better)
Translates to: IHHEAQKGKFRVTDLEVENSVFC*VLSYSA
Trigger: AGCTGAGTATGACAGCACCAAGCAGAAGACAGAGTT...TTCCACTTCCAGATCAGTAACCCTGAATTTGCCTTTCTGCGCTTCGTGGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS-3UTR CAA 90 bp TTTTTGTTCCATCCCAGCACAGCCAACTATGGAAACAGAGCTTCAGGAAGAGAAGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FLFHPSTANYGNRASGREGKMSI*ISREAN
Trigger: GTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCC...TTCTCTTCCTGAAGCTCTGTTTCCATAGTTGGCTGTGCTGGGATGGAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp TGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGAGCTGGGGAAAGGTCTGTCACTTaGAACCCAGTCTACTTGTCC +
Preference number: 5 (lower is better)
Translates to: CVCLMRNTVQFLPSSRAGERSVT*NPVYLS
Trigger: GGACAAGTAGACTGGGTTCAAAGTGACAGACCTTTC...CCCAGCTCTGGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp TCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACCAACAGAGAAGTTTCTaGGCAGGGAAAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: SSFLSSCLPTNLTSLNGDQQRSF*AGKMSI
Trigger: GATTGACATTTTCCCTGCCAAGAAACTTCTCTGTTG...GTCCCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608885.5
CDS-3UTR CAA 90 bp AGGGCCAGATGTGTGTGCTTAATGCGAAACACAGTACAGTTTTTGCCTTCATCCAGCCAAGTTAAGCCCTaGATCCACATGTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: RARCVCLMRNTVQFLPSSSQVKP*IHMFTS
Trigger: TGAAGTGAACATGTGGATCAAGGGCTTAACTTGGCT...GGATGAAGGCAAAAACTGTACTGTGTTTCGCATTAAGCACACACATCTGGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp CTACTGCAGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACATGTTCTTCAGGTCCTaGGCTGATATACGATCCTCA +
Preference number: 5 (lower is better)
Translates to: LLQNNHLATVSSEHVPCNMFFRS*ADIRSS
Trigger: TGAGGATCGTATATCAGCCAAGGACCTGAAGAACAT...GTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCTGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCGCTTTGACTGCACACTaGAAAGTTGGCATAGGGTTT +
Preference number: 5 (lower is better)
Translates to: GFKATGQCKLCFPGPARLALTAH*KVGIGF
Trigger: AAACCCTATGCCAACTTTCAAGTGTGCAGTCAAAGC...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GGTTTTAAAGCTACAGGACAATGTAAACTTTGTTTCCCTGGCCCAGCAAGGCTCAGGAACTTCTTGCCTTaGGCCTTGTTCACGTATTTC +
Preference number: 5 (lower is better)
Translates to: GFKATGQCKLCFPGPARLRNFLP*ALFTYF
Trigger: GAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCT...GAGCCTTGCTGGGCCAGGGAAACAAAGTTTACATTGTCCTGTAGCTTTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp AGAATAATCATCTGGCGACTGTTTCTAGTGAGCATGTCCCATGCAACAGGCTTTAGGTCACCATTCTCCTaGGCAGGGAAAATGTCAATC +
Preference number: 5 (lower is better)
Translates to: RIIIWRLFLVSMSHATGFRSPFS*AGKMSI
Trigger: GATTGACATTTTCCCTGCCAAGGAGAATGGTGACCT...AAAGCCTGTTGCATGGGACATGCTCACTAGAAACAGTCGCCAGATGATTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000609257.5
CDS-3UTR CAA 90 bp GGCATGGAGGCCCAAAACAGTAATAACATCTCATTAATGGCTTGGTTTCTGTCTGCTTTGACTGCACACTaGAAAGTTGGCATAGGGTTT +
Preference number: 5 (lower is better)
Translates to: GMEAQNSNNISLMAWFLSALTAH*KVGIGF
Trigger: AAACCCTATGCCAACTTTCAAGTGTGCAGTCAAAGC...AGACAGAAACCAAGCCATTAATGAGATGTTATTACTGTTTTGGGCCTCCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS-3UTR CAA 90 bp GAGTTGGCACGTTTTCCACTAGGAAGAACAATCAAAACATTTGCAGTGAGGCAATGGGTCAATCAACATTaGTCAGGTCTGGAGGAATCT +
Preference number: 5 (lower is better)
Translates to: ELARFPLGRTIKTFAVRQWVNQH*SGLEES
Trigger: AGATTCCTCCAGACCTGACAAATGTTGATTGACCCA...TTGCCTCACTGCAAATGTTTTGATTGTTCTTCCTAGTGGAAAACGTGCCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373271.5
CDS-3UTR CAA 90 bp TACTGGCTATCATCAGTTCATGTCATCCACGGAACCGGATCTATCTTAAATTTTGAGCACTATCGCTGTTaGATACTGGCTATCATCAGT +
Preference number: 5 (lower is better)
Translates to: YWLSSVHVIHGTGSILNFEHYRC*ILAIIS
Trigger: ACTGATGATAGCCAGTATCAAACAGCGATAGTGCTC...AAAATTTAAGATAGATCCGGTTCCGTGGATGACATGAACTGATGATAGCCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373271.5
ENST00000612731.2
CDS GCA 72 bp GTCATGACGGTGCCCACCTCGAGGCTGCGGCAGAGGTaGAGCACCTCGGCGTCCGAGGGCGCGCCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: VMTVPTSRLRQR*STSASEGAPGP
Trigger: CGGGCCCGGCGCGCCCTCGGACGCCGAGGTGCTGCACCTCTGCCGCAGCCTCGAGGTGGGCACCGTCATGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000490253.1
CDS CAA 72 bp GCGCCCCGGCTCCACGTGATCTGGCGCGTCTCCAGCTaGACCTGGAAGGTCTTCCGCTCGGGTCGCTGCGAC +
Preference number: 6 (lower is better)
Translates to: APRLHVIWRVSS*TWKVFRSGRCD
Trigger: GTCGCAGCGACCCGAGCGGAAGACCTTCCAGGTCAAGCTGGAGACGCGCCAGATCACGTGGAGCCGGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS GCA 72 bp AGCTGGAGGCCTCAGCTGCCTGACGGGCCCACACACTaGCCCCCAGAAGGTTCCAGCAGAATCTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: SWRPQLPDGPTH*PPEGSSRISPW
Trigger: CCAGGGTGAGATTCTGCTGGAACCTTCTGGGGGGCAGTGTGTGGGCCCGTCAGGCAGCTGAGGCCTCCAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477870.5
ENST00000483175.5
CDS GCA 72 bp TGTGGCCTATCTAGCATAGGCCATCGGCTGCCCCACTaGTCTGAGGGGGCCTGTGCTGGGAGCTGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: CGLSSIGHRLPH*SEGACAGSWRP
Trigger: AGGCCTCCAGCTCCCAGCACAGGCCCCCTCAGAGCAGTGGGGCAGCCGATGGCCTATGCTAGATAGGCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477870.5
ENST00000483175.5
CDS CAA 90 bp ATCTTGTCGGCGCCCCGGCTCCACGTGATCTGGCGCGTCTCCAGCTaGACCTGGAAGGTCTTCCGCTCGGGTCGCTGCGACTTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: ILSAPRLHVIWRVSS*TWKVFRSGRCDFLE
Trigger: CTCCAAGAAGTCGCAGCGACCCGAGCGGAAGACCTTCCAGGTCAAGCTGGAGACGCGCCAGATCACGTGGAGCCGGGGCGCCGACAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS CCA 72 bp CGGCTCCACGTGATCTGGCGCGTCTCCAGCTTGACCTaGAAGGTCTTCCGCTCGGGTCGCTGCGACTTCTTG +
Preference number: 6 (lower is better)
Translates to: RLHVIWRVSSLT*KVFRSGRCDFL
Trigger: CAAGAAGTCGCAGCGACCCGAGCGGAAGACCTTCCAGGTCAAGCTGGAGACGCGCCAGATCACGTGGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS TCA 72 bp TCGATGCAGTACTCAGTAAGCAGGCGCTCAGCGATGTaGCGCCCGTCACGCCCTGCCCCTAGCTTCCCATGG +
Preference number: 6 (lower is better)
Translates to: SMQYSVSRRSAM*RPSRPAPSFPW
Trigger: CCATGGGAAGCTAGGGGCAGGGCGTGACGGGCGTCACATCGCTGAGCGCCTGCTTACTGAGTACTGCATCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS TCA 72 bp ACAGGGACATCCCCAGTGGTCTCATCCAGCTTCTCATaGCCTCTGACCTGTGGGTCGAGCCCACCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: TGTSPVVSSSFS*PLTCGSSPPGA
Trigger: CGCCCCAGGTGGGCTCGACCCACAGGTCAGAGGTCATGAGAAGCTGGATGAGACCACTGGGGATGTCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS GCA 72 bp GGGGTCCCAGCATCTTGCCGGGAGTGGATACGGCAGTaGTGGACTTTCCCGTTCCGCCAGAAAGAGAGCGTG +
Preference number: 6 (lower is better)
Translates to: GVPASCREWIRQ*WTFPFRQKESV
Trigger: CACGCTCTCTTTCTGGCGGAACGGGAAAGTCCAGCACTGCCGTATCCACTCCCGGCAAGATGCTGGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 72 bp TCCTCCTGTGAGTCGGCAGCAACATCCAGGGACCAGTaGGCCACCGACGCCATGCAATCTGACAAGCCGGCA +
Preference number: 6 (lower is better)
Translates to: SSCESAATSRDQ*ATDAMQSDKPA
Trigger: TGCCGGCTTGTCAGATTGCATGGCGTCGGTGGCCCACTGGTCCCTGGATGTTGCTGCCGACTCACAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619272.2
CDS TCA 72 bp CGGGTCGCTGCGACTTCTTGGAGTAGAACAAAGTCATaGCGGTGCCCACCTCGAGGCTGCGGCAGAGGTGCA +
Preference number: 6 (lower is better)
Translates to: RVAATSWSRTKS*RCPPRGCGRGA
Trigger: TGCACCTCTGCCGCAGCCTCGAGGTGGGCACCGTCATGACTTTGTTCTACTCCAAGAAGTCGCAGCGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000490253.1
CDS TCA 72 bp CATCCCCAGTGGTCTCATCCAGCTTCTCATGACCTCTaGCCTGTGGGTCGAGCCCACCTGGGGCGATCCTCA +
Preference number: 6 (lower is better)
Translates to: HPQWSHPASHDL*PVGRAHLGRSS
Trigger: TGAGGATCGCCCCAGGTGGGCTCGACCCACAGGTCAGAGGTCATGAGAAGCTGGATGAGACCACTGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS GCA 72 bp CAGAGCCTGGGTTACAGAGCGAGATCCTCCAGATCCTaGTGGCATCACCTCCAGAGCCCTGCATGCACTGGC +
Preference number: 6 (lower is better)
Translates to: QSLGYRARSSRS*WHHLQSPACTG
Trigger: GCCAGTGCATGCAGGGCTCTGGAGGTGATGCCAGCAGGATCTGGAGGATCTCGCTCTGTAACCCAGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423733.3
CDS CCA 72 bp TCCTCCTGTGAGTCGGCAGCAACATCCAGGGACCAGTaGGCCACCGACGCCATGCTGATGGAGAAGACGAAG +
Preference number: 6 (lower is better)
Translates to: SSCESAATSRDQ*ATDAMLMEKTK
Trigger: CTTCGTCTTCTCCATCAGCATGGCGTCGGTGGCCCACTGGTCCCTGGATGTTGCTGCCGACTCACAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000612731.2
CDS TCA 72 bp GCTCTCGGAGGAAGCGCATGTTGGGGACCCGGTAGTTaGCCTGGGACAGCATGTTCTTCAGGTCCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ALGGSACWGPGS*PGTACSSGPWL
Trigger: CAGCCAAGGACCTGAAGAACATGCTGTCCCAGGTCAACTACCGGGTCCCCAACATGCGCTTCCTCCGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
CDS TCA 72 bp AGAAGGGGAGGTCCATCGTCTTCTGGGCGCTGTACATaGGGCTGCGGTACAGCTGAGCAAACTGCCCGTAGG +
Preference number: 6 (lower is better)
Translates to: RRGGPSSSGRCT*GCGTAEQTARR
Trigger: CCTACGGGCAGTTTGCTCAGCTGTACCGCAGCCTCATGTACAGCGCCCAGAAGACGATGGACCTCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 72 bp CGAGGCTGGGGTACAACTAGAGGCGGTTGTCTCCATTaGCCCGAGTCCTTCTTGGGGCCCTTCGTTCTCGAC +
Preference number: 6 (lower is better)
Translates to: RGWGTTRGGCLH*PESFLGPFVLD
Trigger: GTCGAGAACGAAGGGCCCCAAGAAGGACTCGGGTCAATGGAGACAACCGCCTCTAGTTGTACCCCAGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
ENST00000609821.5
CDS CCA 72 bp AAGAAGAACTTGGGGGTCCCAGCATCTTGCCGGGAGTaGATACGGCAGTGCTGGACTTTCCCGTTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: KKNLGVPASCRE*IRQCWTFPFRQ
Trigger: CTGGCGGAACGGGAAAGTCCAGCACTGCCGTATCCACTCCCGGCAAGATGCTGGGACCCCCAAGTTCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 72 bp GAGGGACGCGCATTAGCATGTGCTCAGCCTGTGCTCTaGTCAGGCTCGCGTGGTACCACTCTTTGCTCTCGT +
Preference number: 6 (lower is better)
Translates to: EGRALACAQPVL*SGSRGTTLCSR
Trigger: ACGAGAGCAAAGAGTGGTACCACGCGAGCCTGACCAGAGCACAGGCTGAGCACATGCTAATGCGCGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 72 bp CAGAACCCAACTCCCAGCCAGCACAGCTTCCCAGAATaGTCCAGCATGGTTCCCTACTCCCACTGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: QNPTPSQHSFPE*SSMVPYSHCLP
Trigger: TGGGAGGCAGTGGGAGTAGGGAACCATGCTGGACCATTCTGGGAAGCTGTGCTGGCTGGGAGTTGGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492148.5
CDS CCA 72 bp AGTGGTCTCATCCAGCTTCTCATGACCTCTGACCTGTaGGTCGAGCCCACCTGGGGCGATCCTCACGATTCC +
Preference number: 6 (lower is better)
Translates to: SGLIQLLMTSDL*VEPTWGDPHDS
Trigger: GGAATCGTGAGGATCGCCCCAGGTGGGCTCGACCCACAGGTCAGAGGTCATGAGAAGCTGGATGAGACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS CAA 72 bp TCCTTAATTTCACGAATGTCAATGGCCCCCTCGATCTaGTCGGCGCCCCGGCTCCACGTGATCTGGCGCGTC +
Preference number: 6 (lower is better)
Translates to: SLISRMSMAPSI*SAPRLHVIWRV
Trigger: GACGCGCCAGATCACGTGGAGCCGGGGCGCCGACAAGATCGAGGGGGCCATTGACATTCGTGAAATTAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS CAA 90 bp TCAGCCAGCTTCTTGTGCTTGATGAGGATCTTCCTCTTAAGCTGGTaGGGTGAGGGGAGCCCGTCGGCAGAGATCTCCACGGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SASFLCLMRIFLLSW*GEGSPSAEISTGLV
Trigger: CACCAAGCCCGTGGAGATCTCTGCCGACGGGCTCCCCTCACCCAACCAGCTTAAGAGGAAGATCCTCATCAAGCACAAGAAGCTGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 72 bp GTGCTTGATGAGGATCTTCCTCTTAAGCTGGTTGGGTaGGGGGAGCCCGTCGGCAGAGATCTCCACGGGCTT +
Preference number: 6 (lower is better)
Translates to: VLDEDLPLKLVG*GEPVGRDLHGL
Trigger: AAGCCCGTGGAGATCTCTGCCGACGGGCTCCCCTCACCCAACCAGCTTAAGAGGAAGATCCTCATCAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS GCA 72 bp CCTTGGGCTCCTCCTCATCCTCGTTGCCCTGGTCACTaGTGGTCTCCTCAGAGTAGTAGATCTTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PWAPPHPRCPGH*WSPQSSRSCCW
Trigger: CCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTGACCAGGGCAACGAGGATGAGGAGGAGCCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS GCA 72 bp GTCTGGGCCACTTCACGGATCTTTTTCACCCAGTCCTaGAGCTCCTCCTGTGAGTCGGCAGCAACATCCAGG +
Preference number: 6 (lower is better)
Translates to: VWATSRIFFTQS*SSSCESAATSR
Trigger: CCTGGATGTTGCTGCCGACTCACAGGAGGAGCTGCAGGACTGGGTGAAAAAGATCCGTGAAGTGGCCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000612731.2
CDS CCA 72 bp GGCTCGCGTGGTACCACTCTTTGCTCTCGTGGGCGTTaGTCTGTGGGACAGGCTCTGAAAGTCGCATCTCAA +
Preference number: 6 (lower is better)
Translates to: GSRGTTLCSRGR*SVGQALKVASQ
Trigger: TTGAGATGCGACTTTCAGAGCCTGTCCCACAGACCAACGCCCACGAGAGCAAAGAGTGGTACCACGCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 72 bp CACCAGTGGCCTGCAGTCTGTCTGACCTGCCTTTCCTaGGCTCCTTTCCTCGCCCATGCCTTCTCATATGGA +
Preference number: 6 (lower is better)
Translates to: HQWPAVCLTCLS*APFLAHAFSYG
Trigger: TCCATATGAGAAGGCATGGGCGAGGAAAGGAGCCCAGGAAAGGCAGGTCAGACAGACTGCAGGCCACTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS CAA 72 bp AGGCTCGCGTGGTACCACTCTTTGCTCTCGTGGGCGTaGGTCTGTGGGACAGGCTCTGAAAGTCGCATCTCA +
Preference number: 6 (lower is better)
Translates to: RLAWYHSLLSWA*VCGTGSESRIS
Trigger: TGAGATGCGACTTTCAGAGCCTGTCCCACAGACCAACGCCCACGAGAGCAAAGAGTGGTACCACGCGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CAA 90 bp GAGATCTCCACGGGCTTGGTGAGGAGTGTGTCCCCCAGCACCTTCTaGAAGTATTGGGCCATGTTTCTCTGCTGGGCAATGCTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: EISTGLVRSVSPSTF*KYWAMFLCWAMLQW
Trigger: CCACTGCAGCATTGCCCAGCAGAGAAACATGGCCCAATACTTCAAGAAGGTGCTGGGGGACACACTCCTCACCAAGCCCGTGGAGATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS TCA 72 bp CAGGGCCACGGGGTTGACCATCTCTTCCACGTAGTTTaGTGGGAACCACAGCTGCTTCTTCCCTCCGTAGTC +
Preference number: 6 (lower is better)
Translates to: QGHGVDHLFHVV*WEPQLLLPSVV
Trigger: GACTACGGAGGGAAGAAGCAGCTGTGGTTCCCATCAAACTACGTGGAAGAGATGGTCAACCCCGTGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000612731.2
ENST00000617873.4
ENST00000619272.2
CDS TCA 72 bp AGCCCACCTGGGGCGATCCTCACGATTCCGATCCACTaGGTAAAACTGCTTCCGGAGCCACCTCTCAATCTG +
Preference number: 6 (lower is better)
Translates to: SPPGAILTIPIH*VKLLPEPPLNL
Trigger: CAGATTGAGAGGTGGCTCCGGAAGCAGTTTTACTCAGTGGATCGGAATCGTGAGGATCGCCCCAGGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS GCA 72 bp AGCATCACTGTCTGGCCCTCTTGCTGGACACGGCAATaGTTGATCTTGCCCTCAGCCCGGAAAGAGATGGCA +
Preference number: 6 (lower is better)
Translates to: SITVWPSCWTRQ*LILPSARKEMA
Trigger: TGCCATCTCTTTCCGGGCTGAGGGCAAGATCAAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGTGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS GCA 72 bp AACTCCGAGTTCCCTAGCATCACTGTCTGGCCCTCTTaGTGGACACGGCAATGCTTGATCTTGCCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: NSEFPSITVWPS*WTRQCLILPSA
Trigger: GGCTGAGGGCAAGATCAAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGTGATGCTAGGGAACTCGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS GCA 72 bp GCCCTTCGTTCTCGACTGTCAAAATGGTCTGCGAGATaGTCCTGGGAGATGCGGAAGTCCTCAAACGGCTGC +
Preference number: 6 (lower is better)
Translates to: ALRSRLSKWSAR*SWEMRKSSNGC
Trigger: GCAGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
ENST00000609821.5
CDS GCA 72 bp CCCCAGAAGGTTCCAGCAGAATCTCACCCTGGCGTCTaGTGTCTGGGCCACTTCACGGATCTTTTTCACCCA +
Preference number: 6 (lower is better)
Translates to: PQKVPAESHPGV*CLGHFTDLFHP
Trigger: TGGGTGAAAAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAGGGTGAGATTCTGCTGGAACCTTCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477870.5
ENST00000483175.5
CDS CCA 72 bp TGGGCTCCTCCTCATCCTCGTTGCCCTGGTCACTGCTaGTCTCCTCAGAGTAGTAGATCTTGCTGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: WAPPHPRCPGHC*SPQSSRSCCWS
Trigger: TGACCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTGACCAGGGCAACGAGGATGAGGAGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS CCA 72 bp GGGAGTCAAAGACGAGGTTGTCTGTCAAGAAGAACTTaGGGGTCCCAGCATCTTGCCGGGAGTGGATACGGC +
Preference number: 6 (lower is better)
Translates to: GSQRRGCLSRRT*GSQHLAGSGYG
Trigger: GCCGTATCCACTCCCGGCAAGATGCTGGGACCCCCAAGTTCTTCTTGACAGACAACCTCGTCTTTGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 72 bp GTCCTTCTTGGGGCCCTTCGTTCTCGACTGTCAAAATaGTCTGCGAGATGCTCCTGGGAGATGCGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: VLLGALRSRLSK*SARCSWEMRKS
Trigger: GGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGGGCCCCAAGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
ENST00000609821.5
CDS CCA 72 bp GAGATTTCAGCTGCCAAGTCCCTGGCGTCTGCTGTCTaGGCCACTTCACGGATCTTTTTCACCCAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: EISAAKSLASAV*ATSRIFFTQSC
Trigger: GCAGGACTGGGTGAAAAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAGGGACTTGGCAGCTGAAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612731.2
CDS CCA 72 bp AGCACGTTCTGTGCCAATCTCCTGGCGTCTGCTGTCTaGGCCACTTCACGGATCTTTTTCACCCAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: STFCANLLASAV*ATSRIFFTQSC
Trigger: GCAGGACTGGGTGAAAAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAGGAGATTGGCACAGAACGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599785.5
CDS CAA 72 bp CCCTCTTGCTTCTCCACATTCTGGATGATGGCGCTCTaGATGAAGGTCAGCTCGTCCTCCCTCTGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: PSCFSTFWMMAL*MKVSSSSLWAL
Trigger: CAAGGCCCAGAGGGAGGACGAGCTGACCTTCATCAAGAGCGCCATCATCCAGAATGTGGAGAAGCAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000483175.5
ENST00000617873.4
CDS CAA 90 bp CACGGGCTTGGTGAGGAGTGTGTCCCCCAGCACCTTCTTGAAGTATaGGGCCATGTTTCTCTGCTGGGCAATGCTGCAGTGGTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: HGLGEECVPQHLLEV*GHVSLLGNAAVVLN
Trigger: ATTGAGGACCACTGCAGCATTGCCCAGCAGAGAAACATGGCCCAATACTTCAAGAAGGTGCTGGGGGACACACTCCTCACCAAGCCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS CAA 90 bp CTACTGGTTTCTGGAGCAGCTTCCCTTTCCCCCAGTGCAGCAAACTaGCACCTGATCCACAGGGATCCTTCGACCTCAGTAGAGACGGCT +
Preference number: 6 (lower is better)
Translates to: LLVSGAASLSPSAAN*HLIHRDPSTSVETA
Trigger: AGCCGTCTCTACTGAGGTCGAAGGATCCCTGTGGATCAGGTGCAAGTTTGCTGCACTGGGGGAAAGGGAAGCTGCTCCAGAAACCAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477870.5
CDS TCA 72 bp TTTGCTCTCGTGGGCGTTGGTCTGTGGGACAGGCTCTaGAAGTCGCATCTCAAACTCATTACAGCGCAGGGG +
Preference number: 6 (lower is better)
Translates to: FALVGVGLWDRL*KSHLKLITAQG
Trigger: CCCCTGCGCTGTAATGAGTTTGAGATGCGACTTTCAGAGCCTGTCCCACAGACCAACGCCCACGAGAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS TCA 72 bp CTTGATCTTGCCCTCAGCCCGGAAAGAGATGGCATATaGGTTGGGTTCATTCCGCTTCCGCACCAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: LDLALSPERDGI*VGFIPLPHQEG
Trigger: GCCTTCCTGGTGCGGAAGCGGAATGAACCCAACTCATATGCCATCTCTTTCCGGGCTGAGGGCAAGATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS TCA 72 bp GCTCAGCTGTGCCAATCTTCTCCAGTGCCTCCTCGTTaGTGGGATAGCGCAGCTTCATCTTGCGGTATAGCG +
Preference number: 6 (lower is better)
Translates to: AQLCQSSPVPPR*WDSAASSCGIA
Trigger: CGCTATACCGCAAGATGAAGCTGCGCTATCCCATCAACGAGGAGGCACTGGAGAAGATTGGCACAGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000617873.4
CDS GCA 72 bp GGTCTTCGTTCTCGACTGTCAAAATGGTCTGCGAGATaGTCCTGGGAGATGCGGAAGTCCTCAAACGGCTGC +
Preference number: 6 (lower is better)
Translates to: GLRSRLSKWSAR*SWEMRKSSNGC
Trigger: GCAGCCGTTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608689.5
CDS CCA 72 bp AGCTTCTTGTGCTTGATGAGGATCTTCCTCTTAAGCTaGTTGGGTGAGGGGAGCCCGTCGGCAGAGATCTCC +
Preference number: 6 (lower is better)
Translates to: SFLCLMRIFLLS*LGEGSPSAEIS
Trigger: GGAGATCTCTGCCGACGGGCTCCCCTCACCCAACCAGCTTAAGAGGAAGATCCTCATCAAGCACAAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS CCA 72 bp AGGCTGTCGAACTCCGAGTTCCCTAGCATCACTGTCTaGCCCTCTTGCTGGACACGGCAATGCTTGATCTTG +
Preference number: 6 (lower is better)
Translates to: RLSNSEFPSITV*PSCWTRQCLIL
Trigger: CAAGATCAAGCATTGCCGTGTCCAGCAAGAGGGCCAGACAGTGATGCTAGGGAACTCGGAGTTCGACAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS CCA 72 bp TTAATGCCCCAGAGCCCAGAGGTAGAAAGCAGCTACTaGTTTCTGGAGCAGCTTCCCTTTCCCCCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: LMPQSPEVESSY*FLEQLPFPPVQ
Trigger: CTGCACTGGGGGAAAGGGAAGCTGCTCCAGAAACCAGTAGCTGCTTTCTACCTCTGGGCTCTGGGGCATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477870.5
CDS CCA 72 bp GGGCCCCGTAGTCAGGCTCCTGGAAACAGGACACAATaGGATATGTTAATGCCCCAGAGCCCAGAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: GPRSQAPGNRTQ*DMLMPQSPEVE
Trigger: TTCTACCTCTGGGCTCTGGGGCATTAACATATCCCATTGTGTCCTGTTTCCAGGAGCCTGACTACGGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477870.5
CDS CAA 72 bp AGGGAGTCAAAGACGAGGTTGTCTGTCAAGAAGAACTaGGGGGTCCCAGCATCTTGCCGGGAGTGGATACGG +
Preference number: 6 (lower is better)
Translates to: RESKTRLSVKKN*GVPASCREWIR
Trigger: CCGTATCCACTCCCGGCAAGATGCTGGGACCCCCAAGTTCTTCTTGACAGACAACCTCGTCTTTGACTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000465571.2
CDS TCA 72 bp TCACAGCTGTGCCAATCTTCTCCAGTGCCTCCTCGTTaGTGGGATAGCGCAGCTTCATCTTGCGGTATAGCG +
Preference number: 6 (lower is better)
Translates to: SQLCQSSPVPPR*WDSAASSCGIA
Trigger: CGCTATACCGCAAGATGAAGCTGCGCTATCCCATCAACGAGGAGGCACTGGAGAAGATTGGCACAGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465571.2
CDS GCA 72 bp TCTTGGGGCCCTTCGTTCTCGACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGATGCGGAAGTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: SWGPSFSTVKMV*EMLLGDAEVLK
Trigger: TTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGGGCCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000607954.1
ENST00000609257.5
ENST00000609821.5
CDS CCA 72 bp ATTATCTTCCCTTCAGTGAGCCTGGCGTCTGCTGTCTaGGCCACTTCACGGATCTTTTTCACCCAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: IIFPSVSLASAV*ATSRIFFTQSC
Trigger: GCAGGACTGGGTGAAAAAGATCCGTGAAGTGGCCCAGACAGCAGACGCCAGGCTCACTGAAGGGAAGATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS CAA 90 bp TCCACTCCTGCTTCCAGCCCAGGACTTCTCCTCTTACCTCTGGTCTaGTGTATCCAATTGCCCACTAAGCAGACCCACTTCAACGACCCA +
Preference number: 6 (lower is better)
Translates to: STPASSPGLLLLPLV*CIQLPTKQTHFNDP
Trigger: TGGGTCGTTGAAGTGGGTCTGCTTAGTGGGCAATTGGATACACAAGACCAGAGGTAAGAGGAGAAGTCCTGGGCTGGAAGCAGGAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477870.5
ENST00000483175.5
CDS TCA 72 bp GGTCACCATTCTCCTTGGCAGGGAAAATGTCAATCTTaGTCAGCAGGGAGGCCAACTCCAGGTCCTCACTGT +
Preference number: 6 (lower is better)
Translates to: GHHSPWQGKCQS*SAGRPTPGPHC
Trigger: ACAGTGAGGACCTGGAGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCCTGCCAAGGAGAATGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373271.5
ENST00000461641.5
ENST00000607954.1
ENST00000609257.5
CDS GCA 72 bp GTGGGAAAGAGGGTTGTTCATGGTGTCCGGGCATACTaGATCCAGCTGCGAGTTCCACACACTGTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: VGKRVVHGVRAY*IQLRVPHTVLF
Trigger: AAAGAGAACAGTGTGTGGAACTCGCAGCTGGATGCAGTATGCCCGGACACCATGAACAACCCTCTTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000470528.1
ENST00000492148.5
CDS GCA 72 bp GACAGGATGACTGGGTACTCTGAGGCCACAAAGGCATaGTCCTTGATGGTGTGCAGGACATCTGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: DRMTGYSEATKA*SLMVCRTSENL
Trigger: CAAGTTCTCAGATGTCCTGCACACCATCAAGGAGCATGCCTTTGTGGCCTCAGAGTACCCAGTCATCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244007.7
ENST00000373271.5
CDS GCA 72 bp ATGGAGCTTCTCAATCCATCCCAAGTTCTCTTCCTATaGGACACCACCTCATCCCTTCTATGCCTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: MELLNPSQVLFL*DTTSSLLCLSP
Trigger: GGGGCTGAGGCATAGAAGGGATGAGGTGGTGTCGCATAGGAAGAGAACTTGGGATGGATTGAGAAGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS CAA 72 bp AGGTCACCATTCTCCTTGGCAGGGAAAATGTCAATCTaGATCAGCAGGGAGGCCAACTCCAGGTCCTCACTG +
Preference number: 6 (lower is better)
Translates to: RSPFSLAGKMSI*ISREANSRSSL
Trigger: CAGTGAGGACCTGGAGTTGGCCTCCCTGCTGATCAAGATTGACATTTTCCCTGCCAAGGAGAATGGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373271.5
ENST00000461641.5
ENST00000607954.1
ENST00000609257.5
CDS CAA 90 bp GGTGTGGGTGCCTGCAATGTATCCTCCATCAGCCAAGTTAAGCCCTaGATCCACATGTTCACTTCATCCTCAGATGTGGCTTGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: GVGACNVSSISQVKP*IHMFTSSSDVACRL
Trigger: GAGCCTGCAAGCCACATCTGAGGATGAAGTGAACATGTGGATCAAGGGCTTAACTTGGCTGATGGAGGATACATTGCAGGCACCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
CDS CAA 90 bp TCCGGGCATACTGCATCCAGCTGCGAGTTCCACACACTGTTCTCTTaGGAGAACAGGAAGGTGACAAACTCATCCAGGAAGAAGTATGGC +
Preference number: 6 (lower is better)
Translates to: SGHTASSCEFHTLFS*ENRKVTNSSRKKYG
Trigger: GCCATACTTCTTCCTGGATGAGTTTGTCACCTTCCTGTTCTCCAAAGAGAACAGTGTGTGGAACTCGCAGCTGGATGCAGTATGCCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000470528.1
ENST00000492148.5
CDS TCA 72 bp GTTCACGTATTTCTCAGCCTTGGTTTCCGGGAAGGATaGCATGTCCCGGTAGCAAGCACGTTCTGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: VHVFLSLGFREG*HVPVASTFCAN
Trigger: ATTGGCACAGAACGTGCTTGCTACCGGGACATGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000599785.5
CDS TCA 72 bp GGGACAGCATGTTCTTCAGGTCCTTGGCTGATATACTaGGAAAACAGGGACATCCCCAGTGGTCTCATCCAG +
Preference number: 6 (lower is better)
Translates to: GTACSSGPWLIY*ENRDIPSGLIQ
Trigger: CTGGATGAGACCACTGGGGATGTCCCTGTTTTCTCAGTATATCAGCCAAGGACCTGAAGAACATGCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS TCA 72 bp GTTGACCTGGGACAGCATGTTCTTCAGGTCCTTGGCTaGTATACTGAGAAAACAGGGACATCCCCAGTGGTC +
Preference number: 6 (lower is better)
Translates to: VDLGQHVLQVLG*YTEKTGTSPVV
Trigger: GACCACTGGGGATGTCCCTGTTTTCTCAGTATATCAGCCAAGGACCTGAAGAACATGCTGTCCCAGGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483646.2
CDS CCA 72 bp TCTTGCCTTTGGCCTTGTTCACGTATTTCTCAGCCTTaGTTTCCGGGAAGGATGACATGTCCCGGTAGCAAG +
Preference number: 6 (lower is better)
Translates to: SCLWPCSRISQP*FPGRMTCPGSK
Trigger: CTTGCTACCGGGACATGTCATCCTTCCCGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000599785.5
ENST00000608689.5
CDS GCA 72 bp GGTCACTGCTGGTCTCCTCAGAGTAGTAGATCTTGCTaGTGGTCAGAACAAAGTAGTGGGGATACCATTCGT +
Preference number: 6 (lower is better)
Translates to: GHCWSPQSSRSC*WSEQSSGDTIR
Trigger: ACGAATGGTATCCCCACTACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS GCA 72 bp CCTGGTCACTGCTGGTCTCCTCAGAGTAGTAGATCTTaGTGCTGGTCAGAACAAAGTAGTGGGGATACCATT +
Preference number: 6 (lower is better)
Translates to: PGHCWSPQSSRS*CWSEQSSGDTI
Trigger: AATGGTATCCCCACTACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS GCA 72 bp GGCTTTGACTGCACACTTGAAAGTTGGCATAGGGTTTaGCTCTACATAGAAGCCAGGGTTGCGTCCCTCATA +
Preference number: 6 (lower is better)
Translates to: GFDCTLESWHRV*LYIEARVASLI
Trigger: TATGAGGGACGCAACCCTGGCTTCTATGTAGAGGCAAACCCTATGCCAACTTTCAAGTGTGCAGTCAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000477870.5
ENST00000617873.4
CDS GCA 72 bp GGGAGAGCTGCAGTCGATTGTACTGAAGGAACTTCTTaGCTTTGGCCTTGTTCACGTATTTCTCAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: GRAAVDCTEGTS*LWPCSRISQPW
Trigger: CCAAGGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCAGCTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000599785.5
ENST00000608689.5
CDS GCA 72 bp AAGAGTTGGTCTTCGTTCTCGACTGTCAAAATGGTCTaGGAGATGCTCCTGGGAGATGCGGAAGTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: KSWSSFSTVKMV*EMLLGDAEVLK
Trigger: TTTGAGGACTTCCGCATCTCCCAGGAGCATCTCGCAGACCATTTTGACAGTCGAGAACGAAGACCAACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608689.5
CDS CCA 72 bp CACTGCTGGTCTCCTCAGAGTAGTAGATCTTGCTGCTaGTCAGAACAAAGTAGTGGGGATACCATTCGTGGT +
Preference number: 6 (lower is better)
Translates to: HCWSPQSSRSCC*SEQSSGDTIRG
Trigger: ACCACGAATGGTATCCCCACTACTTTGTTCTGACCAGCAGCAAGATCTACTACTCTGAGGAGACCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000473632.1
CDS CCA 72 bp TTCCTGGGCTCCTTTCCTCGCCCATGCCTTCTCATATaGAGCTTCTCAATCCATCCCAAGTTCTCTTCCTAT +
Preference number: 6 (lower is better)
Translates to: FLGSFPRPCLLI*SFSIHPKFSSY
Trigger: ATAGGAAGAGAACTTGGGATGGATTGAGAAGCTCCATATGAGAAGGCATGGGCGAGGAAAGGAGCCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS CCA 72 bp AGAGCCTGGGTTACAGAGCGAGATCCTGGTTTCTCATaGCTTTCTCAGCCAGCTGCAATTAAGGACCATTTC +
Preference number: 6 (lower is better)
Translates to: RAWVTERDPGFS*LSQPAAIKDHF
Trigger: GAAATGGTCCTTAATTGCAGCTGGCTGAGAAAGCCATGAGAAACCAGGATCTCGCTCTGTAACCCAGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630423.1
CDS CAA 72 bp ACTGCATCCAGCTGCGAGTTCCACACACTGTTCTCTTaGGAGAACAGGAAGGTGACAAACTCATCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TASSCEFHTLFS*ENRKVTNSSRK
Trigger: CTTCCTGGATGAGTTTGTCACCTTCCTGTTCTCCAAAGAGAACAGTGTGTGGAACTCGCAGCTGGATGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000470528.1
ENST00000492148.5
CDS TCA 72 bp TCAGCGTTTTCAGGCGAAATTCCATTCCATAGAGAATaGCAAAGCAATGTGACTGGTCCGGCCGGAAAGCTG +
Preference number: 6 (lower is better)
Translates to: SAFSGEIPFHRE*QSNVTGPAGKL
Trigger: CAGCTTTCCGGCCGGACCAGTCACATTGCTTTGTCATTCTCTATGGAATGGAATTTCGCCTGAAAACGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
ENST00000490253.1
CDS CCA 72 bp GCTGCAGTCGATTGTACTGAAGGAACTTCTTGCCTTTaGCCTTGTTCACGTATTTCTCAGCCTTGGTTTCCG +
Preference number: 6 (lower is better)
Translates to: AAVDCTEGTSCL*PCSRISQPWFP
Trigger: CGGAAACCAAGGCTGAGAAATACGTGAACAAGGCCAAAGGCAAGAAGTTCCTTCAGTACAATCGACTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000461641.5
ENST00000599785.5
ENST00000608689.5
CDS CAA 72 bp GCCTGCAATGTATCCTCCATCAGCCAAGTTAAGCCCTaGATCCACATGTTCACTTCATCCTCAGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: ACNVSSISQVKP*IHMFTSSSDVA
Trigger: AGCCACATCTGAGGATGAAGTGAACATGTGGATCAAGGGCTTAACTTGGCTGATGGAGGATACATTGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244007.7
ENST00000373271.5
ENST00000483646.2
CDS CAA 90 bp AAAGTCTCACAAGGGCTATTAGCTGCTGCTGAATCCAAAGGGCACTaGCAAGTTCTTATCGTTCCTGTCTTTACCTCTGTAGCTCTCAAC +
Preference number: 6 (lower is better)
Translates to: KVSQGLLAAAESKGH*QVLIVPVFTSVALN
Trigger: GTTGAGAGCTACAGAGGTAAAGACAGGAACGATAAGAACTTGCAAGTGCCCTTTGGATTCAGCAGCAGCTAATAGCCCTTGTGAGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483175.5
CDS CAA 90 bp ACATCAGTAGAATACATATCAGAACTAGACCCAGCTGCTATTATATaGGAACAGTATGTTCTGGAGAGCCTCCAGATCCTGCTGGCATCA +
Preference number: 6 (lower is better)
Translates to: TSVEYISELDPAAII*EQYVLESLQILLAS
Trigger: TGATGCCAGCAGGATCTGGAGGCTCTCCAGAACATACTGTTCCAATATAATAGCAGCTGGGTCTAGTTCTGATATGTATTCTACTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630423.1
CDS CAA 72 bp GAATACATATCAGAACTAGACCCAGCTGCTATTATATaGGAACAGTATGTTCTGGAGAGCCTCCAGATCCTG +
Preference number: 6 (lower is better)
Translates to: EYISELDPAAII*EQYVLESLQIL
Trigger: CAGGATCTGGAGGCTCTCCAGAACATACTGTTCCAATATAATAGCAGCTGGGTCTAGTTCTGATATGTATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630423.1
CDS CAA 90 bp ATGAACCTCTCTGATATCAGCCTTACTTTGACTTTGATGTTAGGGTaGCAAGTTACAAATGAAGTGAAGACATCAGTAGAATACATATCA +
Preference number: 6 (lower is better)
Translates to: MNLSDISLTLTLMLG*QVTNEVKTSVEYIS
Trigger: TGATATGTATTCTACTGATGTCTTCACTTCATTTGTAACTTGCAACCCTAACATCAAAGTCAAAGTAAGGCTGATATCAGAGAGGTTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630423.1