RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000115556

Ensembl transcript IDs: ENST00000415854.5, ENST00000417849.5, ENST00000432688.5, ENST00000444453.5, ENST00000446503.5, ENST00000450993.7, ENST00000457773.1, ENST00000458239.1, ENST00000459791.5, ENST00000465713.5, ENST00000469493.5, ENST00000473443.5, ENST00000483685.5, ENST00000484718.1, ENST00000497482.1

Found 631 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATCGCTCAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGG +
Preference number: 1 (lower is better)
Translates to: NRSAIGPGAPDGPCW*QDPPTAGALASISG
Trigger: CCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTGAGCGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
3UTR TCA 90 bp TTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTaGGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGG +
Preference number: 1 (lower is better)
Translates to: FIPVGLRRKQSSGGL*VLCSVLLRVVVQSW
Trigger: CCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR TCA 90 bp GGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGTTGGGGAT +
Preference number: 1 (lower is better)
Translates to: GQVSFPNLCWGSLEP*FILPLALGFEEVGD
Trigger: ATCCCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR CCA 90 bp GAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTaGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGT +
Preference number: 1 (lower is better)
Translates to: ERCIYTSGAKEEAVQ*GTLSAVQCSLKSRS
Trigger: ACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR GCA 90 bp TTAGGTTTCTCTATTCCAAGCCCCTCTGAATTTCTAGTTGCAACCTaGCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGG +
Preference number: 1 (lower is better)
Translates to: LGFSIPSPSEFLVAT*LHTELMGKISCRCR
Trigger: CCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCTTGGAATAGAGAAACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR GCA 90 bp AAATCAGGTCCCAGATTGCTTGTTAGGAAGAATGAGGTAATTTTGTaGCTAGGAATGCACAATCCAAAGCTTGATTTTCACCACCTCCAT +
Preference number: 1 (lower is better)
Translates to: KSGPRLLVRKNEVIL*LGMHNPKLDFHHLH
Trigger: ATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTTCCTAACAAGCAATCTGGGACCTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR-3UTR GCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTCTTTCCCTAATCTTTaGTGGGGAAGCCTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQSFPNL*WGSLEP
Trigger: AGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGA...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CCA 90 bp CCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCCCTGGGGGTTGTAGTTaGAAGAGTCTGTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: PFWRKCPSQMSISSPAVCPGGCS*KSLSSG
Trigger: GCCTGAGGACAGACTCTTCCAACTACAACCCCCAGG...GCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
3UTR-3UTR CCA 90 bp GATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTAGATCCACCAACAGCTaGAGCCCTCGCATCCATATC +
Preference number: 2 (lower is better)
Translates to: DFCLHVETNRSAIGPGAPRSTNS*SPRIHI
Trigger: GATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT...AGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
3UTR-3UTR TCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACATGGGGATGGAGGGGATaGTGCTTCTTTAGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTWGWRG*CFFRFL
Trigger: GAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCA...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR TCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGGGGATGGAGGGGATaGTGCTTCTTTAGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLWGWRG*CFFRFL
Trigger: GAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCA...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR TCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLGSLEP*FILPLA
Trigger: AGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCC...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR TCA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSGSLEP*FILPLA
Trigger: AGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCC...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CCA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCGTCGTAGTACAGTCCTaGGGTCAAGTCTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVVVVQS*GQVSFP
Trigger: AGGGAAAGAGACTTGACCCCAGGACTGTACTACGAC...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CCA 90 bp AGGTCCATCCTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCCTCGCATCCATATCTaGGCCTCCTCAACACTGTTG +
Preference number: 2 (lower is better)
Translates to: RSILIFVSTLKPIAQPLVPRIHI*ASSTLL
Trigger: CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGG...GACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446503.5
3UTR-3UTR TCA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATGTCGGTATGGGATTaGGCCTACAGCAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: SPSEFLVATCLHTELMGKMSVWD*AYSKRK
Trigger: CTTCCTCTTGCTGTAGGCTCAATCCCATACCGACAT...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR-3UTR GCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTTCTTTCCCTAATCTTTaGTGGGGAAGCCTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSSFPNL*WGSLEP
Trigger: AGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGA...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTGATTTATCCTTCCCTTaGCTTTGGGCTTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSDLSFP*LWALRK
Trigger: CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATC...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CCA 90 bp ATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGATTTATCCTTCCCTTaGCTTTGGGCTTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: IYTSGAKEEAVQWGTLSADLSFP*LWALRK
Trigger: CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATC...AGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR CAA 90 bp AACTTCTTGGAAACTCATCTTACCATCCTGATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTGATGGTC +
Preference number: 2 (lower is better)
Translates to: NFLETHLTILIFVST*KPIAQPLVQALLMV
Trigger: GACCATCAGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATGGTAAGATGAGTTTCCAAGAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444453.5
3UTR-3UTR TCA 90 bp GTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGTGGGGATGGAGGGGATaGTGCTTCTTTAGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: VATCLHTELMGKISCRCRWGWRG*CFFRFL
Trigger: GAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCA...CCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR GCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCTTTCCCTAATCTTTaGTGGGGAAGCCTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLSFPNL*WGSLEP
Trigger: AGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGA...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR TCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCGCCTTCACACAGAGTTaGTGGGAAAGATTAGTTGTA +
Preference number: 2 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPAFTQS*WERLVV
Trigger: TACAACTAATCTTTCCCATCAACTCTGTGTGAAGGC...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR GCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTCTTTCCCTAATCTTTaGTGGGGAAGCCTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPSFPNL*WGSLEP
Trigger: AGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGA...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CCA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGGATTTATCCTTCCCTTaGCTTTGGGCTTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: SPSEFLVATCLHTELMGKDLSFP*LWALRK
Trigger: CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATC...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CCA 90 bp GGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACGATTTATCCTTCCCTTaGCTTTGGGCTTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GMGLSLQQEEEGNSSIEYDLSFP*LWALRK
Trigger: CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATC...GTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR CAA 90 bp GGAAAATCAGGTCCCAGATTGCTTGTTAGGAAGAATGAGGTAATTTaGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACCACCTC +
Preference number: 2 (lower is better)
Translates to: GKSGPRLLVRKNEVI*CLGMHNPKLDFHHL
Trigger: GAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTTCCTAACAAGCAATCTGGGACCTGATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR-3UTR GCA 90 bp CTCCAGTATAGAGTACACAAAGGAAAAGGGCAGGAAAGATACCAAAGGCTTATGAATGAGGTAATTTTGTaGCTAGGAATGCACAATCCA +
Preference number: 2 (lower is better)
Translates to: LQYRVHKGKGQERYQRLMNEVIL*LGMHNP
Trigger: TGGATTGTGCATTCCTAGGCACAAAATTACCTCATT...CATAAGCCTTTGGTATCTTTCCTGCCCTTTTCCTTTGTGTACTCTATACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR TCA 72 bp GCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCTGGAGCCCTCGCATCC +
Preference number: 3 (lower is better)
Translates to: AIGPGAPDGPCW*QDPPTAGALAS
Trigger: GGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
3UTR GCA 72 bp GCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTaGAGTCTGCATATTCATGGCCACCATCTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: AEMPITDVHFKP*SLHIHGHHLAA
Trigger: GGCTGCCAGATGGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
3UTR-3UTR CAA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGATCCTTCCCTTGGCTTaGGGCTTTGAGGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGILPLA*GFEEVG
Trigger: CCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGAT...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CAA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAATCCTTCCCTTGGCTTaGGGCTTTGAGGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGILPLA*GFEEVG
Trigger: CCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGAT...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR CCA 72 bp GAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTaGGCTTTGAGGAAGTTGGGGATGGAGGGGATGATG +
Preference number: 3 (lower is better)
Translates to: EALSLDLSFPWL*ALRKLGMEGMM
Trigger: CATCATCCCCTCCATCCCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CAA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAATCCTTCCCTTGGCTTaGGGCTTTGAGGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLILPLA*GFEEVG
Trigger: CCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGAT...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CAA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCTTTCACCACCTCCATTaGTTCTCTCGAGCATCCTTC +
Preference number: 3 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVFHHLH*FSRASF
Trigger: GAAGGATGCTCGAGAGAACAAATGGAGGTGGTGAAA...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR CCA 72 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTaGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: LCSVLLRVVVQS*GQVSFPNLCWG
Trigger: TCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CAA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTATCCTTCCCTTGGCTTaGGGCTTTGAGGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLILPLA*GFEEVG
Trigger: CCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGAT...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CAA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGTTTCACCACCTCCATTaGTTCTCTCGAGCATCCTTC +
Preference number: 3 (lower is better)
Translates to: SPSEFLVATCLHTELMGKFHHLH*FSRASF
Trigger: GAAGGATGCTCGAGAGAACAAATGGAGGTGGTGAAA...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR TCA 72 bp TCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: SFPNLCWGSLEP*FILPLALGFEE
Trigger: TTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CAA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCTTTGCTGGGGAAGCCTaGAGCCTTGATTTATCCTTC +
Preference number: 3 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFFAGEA*SLDLSF
Trigger: GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAA...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR-3UTR CAA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTAAGAATGAGGTAATTTaGTGCCTAGGAATGCACAAT +
Preference number: 3 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSKNEVI*CLGMHN
Trigger: ATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR-3UTR CAA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCAAGAATGAGGTAATTTaGTGCCTAGGAATGCACAAT +
Preference number: 3 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPKNEVI*CLGMHN
Trigger: ATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR-3UTR CAA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATAAATCAGGTCCCAGATaGCTTGTTAGGAAGAATGAG +
Preference number: 3 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNKSGPR*LVRKNE
Trigger: CTCATTCTTCCTAACAAGCAATCTGGGACCTGATTT...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR-3UTR CAA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTAAATCAGGTCCCAGATaGCTTGTTAGGAAGAATGAG +
Preference number: 3 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLKSGPR*LVRKNE
Trigger: CTCATTCTTCCTAACAAGCAATCTGGGACCTGATTT...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR GCA 72 bp TCTATTCCAAGCCCCTCTGAATTTCTAGTTGCAACCTaGCTTCACACAGAGTTGATGGGAAAGATTAGTTGT +
Preference number: 3 (lower is better)
Translates to: SIPSPSEFLVAT*LHTELMGKISC
Trigger: ACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCTTGGAATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR GCA 72 bp CCCAGATTGCTTGTTAGGAAGAATGAGGTAATTTTGTaGCTAGGAATGCACAATCCAAAGCTTGATTTTCAC +
Preference number: 3 (lower is better)
Translates to: PRLLVRKNEVIL*LGMHNPKLDFH
Trigger: GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTTCCTAACAAGCAATCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GCCTGCATTCCAGAGTTCCTGGGGGTTGTAGTTGGAAGAGTCTGTCCTCAGGCCTCAGGCGAGGGCAGCTaGGTGGGCAGCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: ACIPEFLGVVVGRVCPQASGEGS*VGSTPS
Trigger: GGATGGGGTGCTGCCCACTCAGCTGCCCTCGCCTGA...GGCCTGAGGACAGACTCTTCCAACTACAACCCCCAGGAACTCTGGAATGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR TCA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCTCAGGCGAGGGCAGCTaGGTGGGCAGCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPSGEGS*VGSTPS
Trigger: GGATGGGGTGCTGCCCACTCAGCTGCCCTCGCCTGA...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCAGGGGGAGCTCCTCTaGCAGGCTACGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: AGDKIHQQLEPSHPYLGLQGELL*QATQQL
Trigger: GAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTG...GAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp GCTCAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAGGGGGAGCTCCTCTaGCAGGCTACGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: AQPLVQALLMVHAGDKIHQGELL*QATQQL
Trigger: GAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTG...GTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp GCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCTGGTCCAGGCGCTCCTaGTGGTCCATGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: AGDKIHQQLEPSHPYLGLWSRRS*WSMLVT
Trigger: TGTCACCAGCATGGACCATCAGGAGCGCCTGGACCA...GAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTCCCGAGCTCTGCGATaGTGTGGGATCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQSRALR*CGIRKP
Trigger: GGGCTTCCTGATCCCACAGCATCGCAGAGCTCGGGA...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCGTGCCTCCCGAGCTCTaGGATGCTGTGGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: GDKIHQQLEPSHPYLGLLVPPEL*DAVGSG
Trigger: TCCTGATCCCACAGCATCGCAGAGCTCGGGAGGCAC...GAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTGCCATGGTCTGCTGCTaGTCCCAGCTGCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSAMVCC*SQLQWV
Trigger: GACCCACTGCAGCTGGGAGCAGCAGCAGACCATGGC...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp CCAGAGTTCCTGGGGGTTGTAGTTGGAAGAGTCTGTCCTCAGGCCGCTGGGATAGCCATGGTCTGCTGCTaGTCCCAGCTGCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PEFLGVVVGRVCPQAAGIAMVCC*SQLQWV
Trigger: GACCCACTGCAGCTGGGAGCAGCAGCAGACCATGGC...TATCCCAGCGGCCTGAGGACAGACTCTTCCAACTACAACCCCCAGGAACTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGGTGGTGCTCAGCAGCTaGTCCCCCAGGATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQVVLSS*SPRISV
Trigger: GACTGAGATCCTGGGGGAGCAGCTGCTGAGCACCAC...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGGCTTGGCACTGCCCCTaGCCTGCCGTGCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVAWHCP*PAVHAR
Trigger: TCTGGCATGCACGGCAGGCCAGGGGCAGTGCCAAGC...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCGCCCCTGGCCTGCCGTaGATGCCAGACTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTAPGLP*MPDCHA
Trigger: GGCATGACAGTCTGGCATGCACGGCAGGCCAGGGGC...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp CCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCTGCTGCTCCCAGCTaGAGTGGGTCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PQPPFWRKCPSQMSISSPAAAPS*SGSPGT
Trigger: TGTCCCTGGAGACCCACTGCAGCTGGGAGCAGCAGC...AGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp AGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGCCCCATCCAAGGTGGTaGTCAGCAGCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SILPDVSPRLKPAHQPFPPHPRW*SAAAPP
Trigger: TGGGGGAGCAGCTGCTGAGCACCACCTTGGATGGGG...CGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTTGGAGCGGCGGCCATaGAAGACAATGGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQLERRP*KTMVKP
Trigger: GGGCTTCACCATTGTCTTCCATGGCCGCCGCTCCAA...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTGTTGCCATCAGGTCCAGGTTaGAGCGGCGGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: STNSWSPRIHIWASSTLLPSGPG*SGGHGR
Trigger: TCTTCCATGGCCGCCGCTCCAACCTGGACCTGATGG...CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp CAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACCATCAGGTCCAGGTTaGAGCGGCGGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPLVQALLMVHAGDKIHQPSGPG*SGGHGR
Trigger: TCTTCCATGGCCGCCGCTCCAACCTGGACCTGATGG...TTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTTCAGATGACGGGCCATaGTCTGCTGCTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSSDDGP*SAAAPS
Trigger: GCTGGGAGCAGCAGCAGACCATGGCCCGTCATCTGA...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGGCACCCCATCCAAGGTaGTGCTCAGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVAPHPR*CSAAAP
Trigger: GGGAGCAGCTGCTGAGCACCACCTTGGATGGGGTGC...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp CACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGGCACCCCATCCAAGGTaGTGCTCAGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: HSRHSGGNAHHRCPFQALAPHPR*CSAAAP
Trigger: GGGAGCAGCTGCTGAGCACCACCTTGGATGGGGTGC...CAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR TCA 90 bp AAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTTGGTCCAGGCGCTCCTaGTGGTCCATGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: KIHQQLEPSHPYLGLLNTWSRRS*WSMLVT
Trigger: TGTCACCAGCATGGACCATCAGGAGCGCCTGGACCA...AGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCTCAGGCGAGGGCAGCTaGGTGGGCAGCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVSGEGS*VGSTPS
Trigger: GGATGGGGTGCTGCCCACTCAGCTGCCCTCGCCTGA...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp CATGCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCTGTGTCTGTGAGCTGTaGCTCCCGAGCTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: HAGDKIHQQLEPSHPYLGCVCEL*LPSSAM
Trigger: CATCGCAGAGCTCGGGAGGCACAGCTCACAGACACA...GCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp GTCCATGCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGTGGTCAGCTGGTCTTaGAGCAGGGACGCCATCACC +
Preference number: 4 (lower is better)
Translates to: VHAGDKIHQQLEPSHPYLVVSWS*SRDAIT
Trigger: GGTGATGGCGTCCCTGCTGCAAGACCAGCTGACCAC...CAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp AAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTGTGGTCAGCTGGTCTTaGAGCAGGGACGCCATCACC +
Preference number: 4 (lower is better)
Translates to: KIHQQLEPSHPYLGLLNTVVSWS*SRDAIT
Trigger: GGTGATGGCGTCCCTGCTGCAAGACCAGCTGACCAC...AGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCCTTGCGCATCGGCATaGCTTCCTGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSPCASA*LPASAA
Trigger: TGCTGCTGATGCAGGAAGGCATGCCGATGCGCAAGG...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAAGCTGGGCTTGGCACTaGCCCTGGCCTGCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGSWAWH*PWPAVH
Trigger: ATGCACGGCAGGCCAGGGGCAGTGCCAAGCCCAGCT...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACAATGGTGAAGCCCTaGTCCAGGGGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VTRSTNSWSPRIHIWASSTMVKP*SRGSSS
Trigger: AGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGT...TGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp CCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACAGTTGGAGCGGCGGCCATaGAAGACAATGGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PLVQALLMVHAGDKIHQQLERRP*KTMVKP
Trigger: GGGCTTCACCATTGTCTTCCATGGCCGCCGCTCCAA...CTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp ACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTGTTGGCCATCAGCAGCAAGTCCTaGTCAGTGGTCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TNSWSPRIHIWASSTLLAISSKS*SVVSWS
Trigger: AGACCAGCTGACCACTGATCAGGACTTGCTGCTGAT...GGCCAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp ACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTGTTGGCCGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCT +
Preference number: 4 (lower is better)
Translates to: TNSWSPRIHIWASSTLLADGPCW*QDPPTA
Trigger: AGCTGTTGGTGGATCTTGTCACCAGCATGGACCATC...GGCCAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCTCAGGCGAGGGCAGCTaGGTGGGCAGCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFSGEGS*VGSTPS
Trigger: GGATGGGGTGCTGCCCACTCAGCTGCCCTCGCCTGA...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCCTCCACATCAGAGATTaGGACTTGCGCATCGGCATG +
Preference number: 4 (lower is better)
Translates to: GDKIHQQLEPSHPYLGLLLHIRD*DLRIGM
Trigger: CATGCCGATGCGCAAGTCTCAATCTCTGATGTGGAG...GAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTGCCCCTGGCCTGCCGTaGATGCCAGACTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLAPGLP*MPDCHA
Trigger: GGCATGACAGTCTGGCATGCACGGCAGGCCAGGGGC...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTGCCCCTGGCCTGCCGTaGATGCCAGACTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSAPGLP*MPDCHA
Trigger: GGCATGACAGTCTGGCATGCACGGCAGGCCAGGGGC...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCACTGCCCCTGGCCTaGCGTGCATGCCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSALPLA*RACQTV
Trigger: GACAGTCTGGCATGCACGGCAGGCCAGGGGCAGTGC...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAAGCTGGGCTTGGCACTaGCCCTGGCCTGCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTSWAWH*PWPAVH
Trigger: ATGCACGGCAGGCCAGGGGCAGTGCCAAGCCCAGCT...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTCAGGGGGAGCTCCTCTaGCAGGCTACGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRQGELL*QATQQL
Trigger: GAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTG...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTACAATGGTGAAGCCCTaGTCCAGGGGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KIHQQLEPSHPYLGLLNTTMVKP*SRGSSS
Trigger: AGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGT...AGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGCTGGAAGGCATACTGTaGTACTGTGGCCACGACATC +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQLEGIL*YCGHDI
Trigger: GATGTCGTGGCCACAGTAGCACAGTATGCCTTCCAG...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGCCATGGTCTGCTGCTaGTCCCAGCTGCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: IYTSGAKEEAVQWGTLSAAMVCC*SQLQWV
Trigger: GACCCACTGCAGCTGGGAGCAGCAGCAGACCATGGC...AGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTCGGGCCATGGTCTGCTaGTGCTCCCAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSRAMVC*CSQLQW
Trigger: CCACTGCAGCTGGGAGCAGCAGCAGACCATGGCCCG...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCCGGGCCATGGTCTGCTaGTGCTCCCAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLRAMVC*CSQLQW
Trigger: CCACTGCAGCTGGGAGCAGCAGCAGACCATGGCCCG...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATCGGGCCATGGTCTGCTaGTGCTCCCAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ILAEMPITDVHFKPCSLHRAMVC*CSQLQW
Trigger: CCACTGCAGCTGGGAGCAGCAGCAGACCATGGCCCG...ATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp GCTCAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACTTGCTCCCCTTGCACTaGCTTGTTTCCTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: AQPLVQALLMVHAGDKIHLLPLH*LVSSPL
Trigger: AAGAGGGGAGGAAACAAGCCAGTGCAAGGGGAGCAA...GTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp GCTCAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACGCAAGTCCTGATCAGTaGTCAGCTGGTCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AQPLVQALLMVHAGDKIHASPDQ*SAGLAA
Trigger: TGCTGCAAGACCAGCTGACCACTGATCAGGACTTGC...GTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp AGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGCAGAGATTGAGAAGCTaGGCTTGGCACTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SILPDVSPRLKPAHQPFPQRLRS*AWHCPW
Trigger: CCAGGGGCAGTGCCAAGCCCAGCTTCTCAATCTCTG...CGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAGATCCACCAACAGCTaGAGCCCTCGCATCCATATC +
Preference number: 4 (lower is better)
Translates to: GDKIHQQLEPSHPYLGLLRSTNS*SPRIHI
Trigger: GATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT...GAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp CCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCTCAGATGACGGGCCATaGTCTGCTGCTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PFWRKCPSQMSISSPAVCSDDGP*SAAAPS
Trigger: GCTGGGAGCAGCAGCAGACCATGGCCCGTCATCTGA...GCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGGCACCCCATCCAAGGTaGTGCTCAGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGAPHPR*CSAAAP
Trigger: GGGAGCAGCTGCTGAGCACCACCTTGGATGGGGTGC...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGGCACCCCATCCAAGGTaGTGCTCAGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKAPHPR*CSAAAP
Trigger: GGGAGCAGCTGCTGAGCACCACCTTGGATGGGGTGC...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp CCAGAGTTCCTGGGGGTTGTAGTTGGAAGAGTCTGTCCTCAGGCCGCTGGGATACTGTCCTCAGGCCGCTaGGATACACACGGCTTAACT +
Preference number: 4 (lower is better)
Translates to: PEFLGVVVGRVCPQAAGILSSGR*DTHGLT
Trigger: AGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAG...TATCCCAGCGGCCTGAGGACAGACTCTTCCAACTACAACCCCCAGGAACTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCCCACAGCCGCCATTCTaGCGGAAATGCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPPQPPF*RKCPSQ
Trigger: CTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGG...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp CCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACAGATCAGCAGCAAGTCCTaGTCAGTGGTCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PLVQALLMVHAGDKIHQQISSKS*SVVSWS
Trigger: AGACCAGCTGACCACTGATCAGGACTTGCTGCTGAT...CTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp TTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACAGCTGGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCT +
Preference number: 4 (lower is better)
Translates to: LVQALLMVHAGDKIHQQLDGPCW*QDPPTA
Trigger: AGCTGTTGGTGGATCTTGTCACCAGCATGGACCATC...CAGCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGTGGTCCAGGCGCTCCTaGTGGTCCATGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKWSRRS*WSMLVT
Trigger: TGTCACCAGCATGGACCATCAGGAGCGCCTGGACCA...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp CTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCTCCACATCAGAGATTaGGACTTGCGCATCGGCATG +
Preference number: 4 (lower is better)
Translates to: LLMVHAGDKIHQQLEPSHLHIRD*DLRIGM
Trigger: CATGCCGATGCGCAAGTCTCAATCTCTGATGTGGAG...ATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp GTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCACTCTTTTGCTCCCCTTaGACTGGCTTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VTRSTNSWSPRIHIWASSLFCSP*TGLFPP
Trigger: GGGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAG...TGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp ATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTGGTGCCTCCCGAGCTCTaGGATGCTGTGGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: IFVSTLKPIAQPLVQALLVPPEL*DAVGSG
Trigger: TCCTGATCCCACAGCATCGCAGAGCTCGGGAGGCAC...CAGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTGTGGTCAGCTGGTCTTaGAGCAGGGACGCCATCACC +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRVVSWS*SRDAIT
Trigger: GGTGATGGCGTCCCTGCTGCAAGACCAGCTGACCAC...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTCTGGCCTGCCGTGCATaGCAGACTGTCATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: IYTSGAKEEAVQWGTLSALACRA*QTVMPS
Trigger: TGACGGCATGACAGTCTGGCATGCACGGCAGGCCAG...AGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTCAGGGGGAGCTCCTCTaGCAGGCTACGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLQGELL*QATQQL
Trigger: GAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTG...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCCAGGGGGAGCTCCTCTaGCAGGCTACGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLQGELL*QATQQL
Trigger: GAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTG...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCACAATGGTGAAGCCCTaGTCCAGGGGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTTMVKP*SRGSSS
Trigger: AGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGT...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGCAGTCTCTCTCCTTCTaGTCCTCTTGGAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQQSLSF*SSWRKS
Trigger: GGATTTCCTCCAAGAGGAGCAGAAGGAGAGAGACTG...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTGAGCAAGCTCAGAGGTaGAGTCTCTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSEQAQR*SLSPSA
Trigger: AGCAGAAGGAGAGAGACTGCACCTCTGAGCTTGCTC...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTGCTGCTGCTCCCAGCTaGAGTGGGTCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAAAAPS*SGSPGT
Trigger: TGTCCCTGGAGACCCACTGCAGCTGGGAGCAGCAGC...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTGTGGTGCTCAGCAGCTaGTCCCCCAGGATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSVVLSS*SPRISV
Trigger: GACTGAGATCCTGGGGGAGCAGCTGCTGAGCACCAC...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAGTGGTGCTCAGCAGCTaGTCCCCCAGGATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGVVLSS*SPRISV
Trigger: GACTGAGATCCTGGGGGAGCAGCTGCTGAGCACCAC...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTCCCCATCCAAGGTGGTaGTCAGCAGCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLPHPRW*SAAAPP
Trigger: TGGGGGAGCAGCTGCTGAGCACCACCTTGGATGGGG...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACCATCTGGCACCCCATCCAAGGTGGTaGTCAGCAGCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TDVHFKPCSLHIHGHHLAPHPRW*SAAAPP
Trigger: TGGGGGAGCAGCTGCTGAGCACCACCTTGGATGGGG...TGCCAGATGGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTCAAGCCCTGCAGTCTaGATATTCATGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQSSPAV*IFMATI
Trigger: GATGGTGGCCATGAATATGCAGACTGCAGGGCTTGA...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCACCCTTCCCGTGAAATaGCCACCTCAGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPTLPVK*PPQDSS
Trigger: GGATGAGTCCTGAGGTGGGCATTTCACGGGAAGGGT...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAGCAAGTCCTGATCAGTaGTCAGCTGGTCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VTRSTNSWSPRIHIWASSASPDQ*SAGLAA
Trigger: TGCTGCAAGACCAGCTGACCACTGATCAGGACTTGC...TGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCGCTTGGCACTGCCCCTaGCCTGCCGTGCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFAWHCP*PAVHAR
Trigger: TCTGGCATGCACGGCAGGCCAGGGGCAGTGCCAAGC...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCCTCCTCAACACTGTTaGCCATCAGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVPPQHC*PSGPGW
Trigger: CCAACCTGGACCTGATGGCCAACAGTGTTGAGGAGG...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGCCTCCTCAACACTGTTaGCCATCAGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SILPDVSPRLKPAHQPFPPPQHC*PSGPGW
Trigger: CCAACCTGGACCTGATGGCCAACAGTGTTGAGGAGG...CGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCCCTCCTCAACACTGTTaGCCATCAGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPPPQHC*PSGPGW
Trigger: CCAACCTGGACCTGATGGCCAACAGTGTTGAGGAGG...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp CCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACAGCCTCGCATCCATATCTaGGCCTCCTCAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: PLVQALLMVHAGDKIHQQPRIHI*ASSTLL
Trigger: CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGG...CTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAGATGACGGGCCATaGTCTGCTGCTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGSDDGP*SAAAPS
Trigger: GCTGGGAGCAGCAGCAGACCATGGCCCGTCATCTGA...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGAGGAAGCAGTCCAGTaGGGGACTTTGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPEEAVQ*GTLSAV
Trigger: CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGCAGTTTGCCACTGTCTaGAGGTTCATAGCGGTCAAT +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQQFATV*RFIAVN
Trigger: ATTGACCGCTATGAACCTTCAGACAGTGGCAAACTG...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTGATGACTGGGTAGTCTaGTGTCTGGAAGGCATACTG +
Preference number: 4 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSDDWVV*CLEGIL
Trigger: CAGTATGCCTTCCAGACATCAGACTACCCAGTCATC...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGGGAGTTGCTGACCGCTaGTCACCTGGATTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVGVADR*SPGLRE
Trigger: CTCTCTTAATCCAGGTGATCAGCGGTCAGCAACTCC...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTAAGCTGGGCGGAGGCTaGTGCCATCTTTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSKLGGG*CHLWTA
Trigger: TGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTT...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTTGGGGATGGAGGGGATaGTGCTTCTTTAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSWGWRG*CFFRFL
Trigger: GAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCA...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGCACCAACCCTTCCCGTaGAATGCCCACCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGHQPFP*NAHLRT
Trigger: AGTCCTGAGGTGGGCATTTCACGGGAAGGGTTGGTG...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACACCAACCCTTCCCGTaGAATGCCCACCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGHQPFP*NAHLRT
Trigger: AGTCCTGAGGTGGGCATTTCACGGGAAGGGTTGGTG...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCGTGCCTCCCGAGCTCTaGGATGCTGTGGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPVPPEL*DAVGSG
Trigger: TCCTGATCCCACAGCATCGCAGAGCTCGGGAGGCAC...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGCCTTGCGCATCGGCATaGCTTCCTGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGPCASA*LPASAA
Trigger: TGCTGCTGATGCAGGAAGGCATGCCGATGCGCAAGG...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGAGACTGGGACGTGTCTaGTGCCTGAAAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQRLGRV*CLKKTE
Trigger: TTCAGTCTTTTTCAGGCAGCAGACACGTCCCAGTCT...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAGCTGCTGCTCCCAGCTaGAGTGGGTCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLAAAPS*SGSPGT
Trigger: TGTCCCTGGAGACCCACTGCAGCTGGGAGCAGCAGC...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGGCTGCTGCTCCCAGCTaGAGTGGGTCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SPSEFLVATCLHTELMGKAAAPS*SGSPGT
Trigger: TGTCCCTGGAGACCCACTGCAGCTGGGAGCAGCAGC...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAGCCATGGTCTGCTGCTaGTCCCAGCTGCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLAMVCC*SQLQWV
Trigger: GACCCACTGCAGCTGGGAGCAGCAGCAGACCATGGC...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTACCCCATCCAAGGTGGTaGTCAGCAGCTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLPHPRW*SAAAPP
Trigger: TGGGGGAGCAGCTGCTGAGCACCACCTTGGATGGGG...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGGTAACCTTGTTGCATaGAGGTCCAAGGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPGNLVA*RSKAGC
Trigger: ACACCCTGCCTTGGACCTGCATGCAACAAGGTTACC...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGATGGGCTTGGATTTCTaGCGGGACAAGAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVMGLDF*RDKRRD
Trigger: GTCCCTTCTCTTGTCCCGGCAGAAATCCAAGCCCAT...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CCA 90 bp AAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTTTGCTCCCCTTGCACTaGCTTGTTTCCTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KIHQQLEPSHPYLGLLNTLLPLH*LVSSPL
Trigger: AAGAGGGGAGGAAACAAGCCAGTGCAAGGGGAGCAA...AGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGGCTTCTTCCAGCTTTTaGACCTCACCTTGCGCATCG +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVASSSF*TSPCAS
Trigger: CGATGCGCAAGGTGAGGTCCAAAAGCTGGAAGAAGC...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCCTCGCATCCATATCTaGGCCTCCTCAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVPRIHI*ASSTLL
Trigger: CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGG...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTCCTCGCATCCATATCTaGGCCTCCTCAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: KIHQQLEPSHPYLGLLNTPRIHI*ASSTLL
Trigger: CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGG...AGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp AGCCACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCGGCTCAGTCTCAAACTaGGACTCCAGCGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: SHSRHSGGNAHHRCPFQAGSVSN*DSSANS
Trigger: AGAATTGGCGCTGGAGTCCCAGTTTGAGACTGAGCC...GGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTCTGCATATTCATaGCCACCATCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVQSAYS*PPSGSL
Trigger: CAGGCTGCCAGATGGTGGCCATGAATATGCAGACTG...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTDGPCW*QDPPTA
Trigger: AGCTGTTGGTGGATCTTGTCACCAGCATGGACCATC...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp CACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGTCTCCAGGGACAAGATaGCTGGGTAGTCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: HSRHSGGNAHHRCPFQALSPGTR*LGSLMS
Trigger: AGACATCAGACTACCCAGTCATCTTGTCCCTGGAGA...CAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR TCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGAATTCGCAATGGCTCTaGGTCTCATCTCCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQNSQWL*VSSPLR
Trigger: TCTCAAAGGAGATGAGACTCAGAGCCATTGCGAATT...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR GCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCGTGCCTCCCGAGCTCTaGGATGCTGTGGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFVPPEL*DAVGSG
Trigger: TCCTGATCCCACAGCATCGCAGAGCTCGGGAGGCAC...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAGTGGTCAGCTGGTCTTaGAGCAGGGACGCCATCACC +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSVVSWS*SRDAIT
Trigger: GGTGATGGCGTCCCTGCTGCAAGACCAGCTGACCAC...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCCCTTGCGCATCGGCATaGCTTCCTGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLPCASA*LPASAA
Trigger: TGCTGCTGATGCAGGAAGGCATGCCGATGCGCAAGG...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCTTTTGGACCTCACCTTaGGCATCGGCATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTFWTSP*ASACLP
Trigger: AGGAAGGCATGCCGATGCGCAAGGTGAGGTCCAAAA...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTGCACTGCCCCTGGCCTaGCGTGCATGCCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLALPLA*RACQTV
Trigger: GACAGTCTGGCATGCACGGCAGGCCAGGGGCAGTGC...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCGCACTGCCCCTGGCCTaGCGTGCATGCCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFALPLA*RACQTV
Trigger: GACAGTCTGGCATGCACGGCAGGCCAGGGGCAGTGC...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCAGCTGGGCTTGGCACTaGCCCTGGCCTGCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFSWAWH*PWPAVH
Trigger: ATGCACGGCAGGCCAGGGGCAGTGCCAAGCCCAGCT...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCACAATGGTGAAGCCCTaGTCCAGGGGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPTMVKP*SRGSSS
Trigger: AGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGT...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCTCCATACTCAGCACATaGCGCAGTTTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPSILST*RSLPLS
Trigger: AGACAGTGGCAAACTGCGGCATGTGCTGAGTATGGA...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCGTGGTGCTCAGCAGCTaGTCCCCCAGGATCTCAGTC +
Preference number: 4 (lower is better)
Translates to: EMPITDVHFKPCSLHIHGVVLSS*SPRISV
Trigger: GACTGAGATCCTGGGGGAGCAGCTGCTGAGCACCAC...GCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp CACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGTCAAGCCCTGCAGTCTaGATATTCATGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: HSRHSGGNAHHRCPFQALSSPAV*IFMATI
Trigger: GATGGTGGCCATGAATATGCAGACTGCAGGGCTTGA...CAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp ATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTACCCTTCCCGTGAAATaGCCACCTCAGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: IYTSGAKEEAVQWGTLSATLPVK*PPQDSS
Trigger: GGATGAGTCCTGAGGTGGGCATTTCACGGGAAGGGT...AGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTACTTGCGCATCGGCATaGCTTCCTGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DFCLHVETNRSAIGPGAPTCASA*LPASAA
Trigger: TGCTGCTGATGCAGGAAGGCATGCCGATGCGCAAGT...AGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp CTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCACTTGCGCATCGGCATaGCTTCCTGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LIFVSTLKPIAQPLVQALTCASA*LPASAA
Trigger: TGCTGCTGATGCAGGAAGGCATGCCGATGCGCAAGT...GAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp GCTCAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACAGCAACTCGGAATCATaGCCATTACGTATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: AQPLVQALLMVHAGDKIHSNSES*PLRIVS
Trigger: GGAGACAATACGTAATGGCCATGATTCCGAGTTGCT...GTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp CATCCTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCTTGGAGCGGCGGCCATaGAAGACAATGGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: HPDFCLHVETNRSAIGPGLERRP*KTMVKP
Trigger: GGGCTTCACCATTGTCTTCCATGGCCGCCGCTCCAA...GCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTACCATCAGGTCCAGGTTaGAGCGGCGGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLPSGPG*SGGHGR
Trigger: TCTTCCATGGCCGCCGCTCCAACCTGGACCTGATGG...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTGCCTCCTCAACACTGTTaGCCATCAGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: IFVSTLKPIAQPLVQALLPPQHC*PSGPGW
Trigger: CCAACCTGGACCTGATGGCCAACAGTGTTGAGGAGG...CAGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTGATGGGGAGGCAGGCTaGGTTGAAGATGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRDGEAG*VEDVSI
Trigger: GATGGAGACATCTTCAACCCAGCCTGCCTCCCCATC...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGTGTTCTCCACATAGTTaGTCTCCTGCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SILPDVSPRLKPAHQPFPCSPHS*SPAVLC
Trigger: ACACAGCACGGCAGGAGACCAACTATGTGGAGAACA...CGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGCACAAAGATGGAAGCTaGGCGGAGGCTGATGCCATC +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGHKDGS*AEADAI
Trigger: GATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGTG...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTGGGCTGGACACAAGATaGGCTTGGATTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAGLDTR*AWISAG
Trigger: CCCGGCAGAAATCCAAGCCCATCTTGTGTCCAGCCC...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
3UTR CAA 72 bp TGGACAGAGAGGTCCATCCTGATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: WTERSILIFVST*KPIAQPLVQAL
Trigger: GAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATGGACCTCTCTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446503.5
CDS-3UTR TCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGCTCCACATCAGAGATTaGGAAGCTGGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGLHIRD*EAGLGT
Trigger: AGTGCCAAGCCCAGCTTCTCAATCTCTGATGTGGAG...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGCTCCACATCAGAGATTaGGAAGCTGGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKLHIRD*EAGLGT
Trigger: AGTGCCAAGCCCAGCTTCTCAATCTCTGATGTGGAG...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGCTTCTGCCCATCAGCTaGAAAACTTTCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQLLPIS*KTFKQF
Trigger: GAACTGTTTGAAAGTTTTTCAGCTGATGGGCAGAAG...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCGTTCATAGCGGTCAATaGGTTCCAGAGCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTVHSGQ*VPEQAQ
Trigger: CTGAGCTTGCTCTGGAACTCATTGACCGCTATGAAC...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCTCTCCAGGGACAAGATaGCTGGGTAGTCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTSPGTR*LGSLMS
Trigger: AGACATCAGACTACCCAGTCATCTTGTCCCTGGAGA...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGCTCTTTTGCTCCCCTTaGACTGGCTTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKLFCSP*TGLFPP
Trigger: GGGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAG...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTGCTCTTTTGCTCCCCTTaGACTGGCTTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: IFVSTLKPIAQPLVQALLLFCSP*TGLFPP
Trigger: GGGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAG...CAGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR GCA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTTGTGTCTGTGAGCTGTaGCTCCCGAGCTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPCVCEL*LPSSAM
Trigger: CATCGCAGAGCTCGGGAGGCACAGCTCACAGACACA...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TCCATCCTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGTGTGTCTGTGAGCTGTaGCTCCCGAGCTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: SILIFVSTLKPIAQPLVQCVCEL*LPSSAM
Trigger: CATCGCAGAGCTCGGGAGGCACAGCTCACAGACACA...CTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446503.5
CDS-3UTR GCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTGTGGTCAGCTGGTCTTaGAGCAGGGACGCCATCACC +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPVVSWS*SRDAIT
Trigger: GGTGATGGCGTCCCTGCTGCAAGACCAGCTGACCAC...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGCTGGCCTGCCGTGCATaGCAGACTGTCATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: VATCLHTELMGKISCRCRLACRA*QTVMPS
Trigger: TGACGGCATGACAGTCTGGCATGCACGGCAGGCCAG...CCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCTGGGACGTGTCTGCTaGCTGAAAAAGACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSLGRVC*LKKTEG
Trigger: GCCTTCAGTCTTTTTCAGGCAGCAGACACGTCCCAG...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTTATATCCCTCGACGCTaGTCTGGCCACAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSYIPRR*SGHKAG
Trigger: ACCAGCTTTGTGGCCAGAGCAGCGTCGAGGGATATA...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTCTGGAAGGCATACTGTaGTACTGTGGCCACGACATC +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRLEGIL*YCGHDI
Trigger: GATGTCGTGGCCACAGTAGCACAGTATGCCTTCCAG...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp CACAGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGGTCCATTTCAAGCCCTaGAGTCTGCATATTCATGGC +
Preference number: 4 (lower is better)
Translates to: HSRHSGGNAHHRCPFQALVHFKP*SLHIHG
Trigger: GCCATGAATATGCAGACTGCAGGGCTTGAAATGGAC...CAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp AGCCGCCATTCTGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGCCATTCTGGCGGAAATaGCCATCACAGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: SRHSGGNAHHRCPFQALQPFWRK*PSQMSI
Trigger: AATGGACATCTGTGATGGGCATTTCCGCCAGAATGG...CTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCAGAATGGCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTGGTAACCTTGTTGCATaGAGGTCCAAGGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSGNLVA*RSKAGC
Trigger: ACACCCTGCCTTGGACCTGCATGCAACAAGGTTACC...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACACAGAACTCAGTAGCATaGGTGTCCCTCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTQNSVA*VSLCSA
Trigger: GGCTGAGCAGAGGGACACGCATGCTACTGAGTTCTG...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CCA 90 bp ATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGCAAGTCCTGATCAGTaGTCAGCTGGTCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: IYTSGAKEEAVQWGTLSAASPDQ*SAGLAA
Trigger: TGCTGCAAGACCAGCTGACCACTGATCAGGACTTGC...AGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp CAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAAAGCAACTCGGAATCATaGCCATTACGTATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QPLVQALLMVHAGDKIHQSNSES*PLRIVS
Trigger: GGAGACAATACGTAATGGCCATGATTCCGAGTTGCT...TTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCATTGGAGCGGCGGCCATaGAAGACAATGGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSLERRP*KTMVKP
Trigger: GGGCTTCACCATTGTCTTCCATGGCCGCCGCTCCAA...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTCCATCAGGTCCAGGTTaGAGCGGCGGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPPSGPG*SGGHGR
Trigger: TCTTCCATGGCCGCCGCTCCAACCTGGACCTGATGG...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp CATCCTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCCCTCCTCAACACTGTTaGCCATCAGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HPDFCLHVETNRSAIGPGPPQHC*PSGPGW
Trigger: CCAACCTGGACCTGATGGCCAACAGTGTTGAGGAGG...GCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGATCCACCAACAGCTaGAGCCCTCGCATCCATATC +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRRSTNS*SPRIHI
Trigger: GATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGATGGGGAGGCAGGCTaGGTTGAAGATGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTDGEAG*VEDVSI
Trigger: GATGGAGACATCTTCAACCCAGCCTGCCTCCCCATC...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCGATGGGGAGGCAGGCTaGGTTGAAGATGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVDGEAG*VEDVSI
Trigger: GATGGAGACATCTTCAACCCAGCCTGCCTCCCCATC...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCCTGTCCTCAGGCCGCTaGGATACACACGGCTTAACT +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPLSSGR*DTHGLT
Trigger: AGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAG...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCCTGTCCTCAGGCCGCTaGGATACACACGGCTTAACT +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLLSSGR*DTHGLT
Trigger: AGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAG...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTCCTGGGGGTTGTAGTTaGAAGAGTCTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLPGGCS*KSLSSG
Trigger: GCCTGAGGACAGACTCTTCCAACTACAACCCCCAGG...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTCCACAGCCGCCATTCTaGCGGAAATGCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPPQPPF*RKCPSQ
Trigger: CTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGG...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTACCACAGCCGCCATTCTaGCGGAAATGCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLPQPPF*RKCPSQ
Trigger: CTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGG...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACCATCTGCCACAGCCGCCATTCTaGCGGAAATGCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: ITDVHFKPCSLHIHGHHLPQPPF*RKCPSQ
Trigger: CTGTGATGGGCATTTCCGCCAGAATGGCGGCTGTGG...CAGATGGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGCCACAAAACGCAGCATaGCAAGTTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKPQNAA*QVQAPA
Trigger: TGCTGGTGCCTGAACTTGCCATGCTGCGTTTTGTGG...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTCACAAAGATGGAAGCTaGGCGGAGGCTGATGCCATC +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSHKDGS*AEADAI
Trigger: GATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGTG...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp GAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAGCCCCCACAAAGATGGAAGCTaGGCGGAGGCTGATGCCATC +
Preference number: 4 (lower is better)
Translates to: EVGDGGDDASLGFSIPSPHKDGS*AEADAI
Trigger: GATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGTG...GGGGCTTGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGAGGAAGCAGTCCAGTaGGGGACTTTGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSEEAVQ*GTLSAV
Trigger: CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCGAGGAAGCAGTCCAGTaGGGGACTTTGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVEEAVQ*GTLSAV
Trigger: CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAGCCCCGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCT +
Preference number: 4 (lower is better)
Translates to: EVGDGGDDASLGFSIPSPDGPCW*QDPPTA
Trigger: AGCTGTTGGTGGATCTTGTCACCAGCATGGACCATC...GGGGCTTGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGCTGCCTGAAAAAGACTaGAGGCATATTCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SILPDVSPRLKPAHQPFPLPEKD*RHILGP
Trigger: TGGACCAAGAATATGCCTTCAGTCTTTTTCAGGCAG...CGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCGACGTGTCTGCTGCCTaGAAAAGACTGAAGGCATAT +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTDVSAA*KRLKAY
Trigger: ATATGCCTTCAGTCTTTTTCAGGCAGCAGACACGTC...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTGGAGTTGCTGACCGCTaGTCACCTGGATTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAGVADR*SPGLRE
Trigger: CTCTCTTAATCCAGGTGATCAGCGGTCAGCAACTCC...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAGCCCCACTTTGGGGAGTTGCTaGCCGCTGATCACCTGGATT +
Preference number: 4 (lower is better)
Translates to: EVGDGGDDASLGFSIPSPTLGSC*PLITWI
Trigger: AATCCAGGTGATCAGCGGTCAGCAACTCCCCAAAGT...GGGGCTTGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCAAGCTGGGCGGAGGCTaGTGCCATCTTTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSKLGGG*CHLWTA
Trigger: TGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTT...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRGSLEP*FILPLA
Trigger: AGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCC...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSGSLEP*FILPLA
Trigger: AGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCC...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAGCCCCCTCTTTTGCTCCCCTTaGACTGGCTTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: EVGDGGDDASLGFSIPSPLFCSP*TGLFPP
Trigger: GGGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAG...GGGGCTTGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTTTGGACCTCACCTTaGGCATCGGCATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSFWTSP*ASACLP
Trigger: AGGAAGGCATGCCGATGCGCAAGGTGAGGTCCAAAA...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACACTGGGACGTGTCTGCTaGCTGAAAAAGACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTLGRVC*LKKTEG
Trigger: GCCTTCAGTCTTTTTCAGGCAGCAGACACGTCCCAG...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCAGACTGGGACGTGTCTaGTGCCTGAAAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTRLGRV*CLKKTE
Trigger: TTCAGTCTTTTTCAGGCAGCAGACACGTCCCAGTCT...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCTTTCAAACAGTTCCTaGACCTCAGCACGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVLSNSS*TSARLV
Trigger: GACTAAACGTGCTGAGGTGCAGGAACTGTTTGAAAG...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTGAGCAAGCTCAGAGGTaGAGTCTCTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLEQAQR*SLSPSA
Trigger: AGCAGAAGGAGAGAGACTGCACCTCTGAGCTTGCTC...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTTCCATACTCAGCACATaGCGCAGTTTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: IYTSGAKEEAVQWGTLSASILST*RSLPLS
Trigger: AGACAGTGGCAAACTGCGGCATGTGCTGAGTATGGA...AGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGACGGGCCATGGTCTGCTaGTGCTCCCAGCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FLVATCLHTELMGKISCRRAMVC*CSQLQW
Trigger: CCACTGCAGCTGGGAGCAGCAGCAGACCATGGCCCG...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCGGTAACCTTGTTGCATaGAGGTCCAAGGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVGNLVA*RSKAGC
Trigger: ACACCCTGCCTTGGACCTGCATGCAACAAGGTTACC...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp CCAGAGTTCCTGGGGGTTGTAGTTGGAAGAGTCTGTCCTCAGGCCGCTGGGATAAACTGCCAAGTATTGTaGTGCACAAACTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: PEFLGVVVGRVCPQAAGINCQVL*CTNSLP
Trigger: AGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTT...TATCCCAGCGGCCTGAGGACAGACTCTTCCAACTACAACCCCCAGGAACTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCTTGCTCCCCTTGCACTaGCTTGTTTCCTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVLLPLH*LVSSPL
Trigger: AAGAGGGGAGGAAACAAGCCAGTGCAAGGGGAGCAA...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTGCTCCCCTTGCACTaGCTTGTTTCCTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSLLPLH*LVSSPL
Trigger: AAGAGGGGAGGAAACAAGCCAGTGCAAGGGGAGCAA...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTGGCACCAGATCACCGTaGGCAGGAGAGCAGAATAGC +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPGTRSP*AGEQNS
Trigger: GCTATTCTGCTCTCCTGCCCACGGTGATCTGGTGCC...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGCAAGTCCTGATCAGTaGTCAGCTGGTCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTASPDQ*SAGLAA
Trigger: TGCTGCAAGACCAGCTGACCACTGATCAGGACTTGC...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTTCTTCCAGCTTTTaGACCTCACCTTGCGCATCG +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSASSSF*TSPCAS
Trigger: CGATGCGCAAGGTGAGGTCCAAAAGCTGGAAGAAGC...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AAATTGGAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTCCATCAGGTCCAGGTTaGAGCGGCGGCCATGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLERDVFIPVGLRRKQSSPSGPG*SGGHGR
Trigger: TCTTCCATGGCCGCCGCTCCAACCTGGACCTGATGG...ACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTCCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417849.5
CDS-3UTR CCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTCCTCGCATCCATATCTaGGCCTCCTCAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLPRIHI*ASSTLL
Trigger: CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGG...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GACAGAGAGGTCCATCCTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCAGATCCACCAACAGCTaGAGCCCTCGCATCCATATC +
Preference number: 4 (lower is better)
Translates to: DREVHPDFCLHVETNRSARSTNS*SPRIHI
Trigger: GATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT...GGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATGGACCTCTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446503.5
CDS-3UTR CCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCTCAGATGACGGGCCATaGTCTGCTGCTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFSDDGP*SAAAPS
Trigger: GCTGGGAGCAGCAGCAGACCATGGCCCGTCATCTGA...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACCATCTGCCTGGGGGTTGTAGTTaGAAGAGTCTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ITDVHFKPCSLHIHGHHLPGGCS*KSLSSG
Trigger: GCCTGAGGACAGACTCTTCCAACTACAACCCCCAGG...CAGATGGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACACAGTCTGCATATTCATaGCCACCATCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTQSAYS*PPSGSL
Trigger: CAGGCTGCCAGATGGTGGCCATGAATATGCAGACTG...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACCAGTCTGCATATTCATaGCCACCATCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MPITDVHFKPCSLHIHGHQSAYS*PPSGSL
Trigger: CAGGCTGCCAGATGGTGGCCATGAATATGCAGACTG...GTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTCCACAAAACGCAGCATaGCAAGTTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSPQNAA*QVQAPA
Trigger: TGCTGGTGCCTGAACTTGCCATGCTGCGTTTTGTGG...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTCCCTCCAGGCCTTCCTaGATGCAGATATACACAAAG +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRPSRPS*MQIYTK
Trigger: CTTTGTGTATATCTGCATCCAGGAAGGCCTGGAGGG...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGGTCGTAGTACAGTCCTaGGGTCAAGTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKVVVQS*GQVSFP
Trigger: AGGGAAAGAGACTTGACCCCAGGACTGTACTACGAC...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTGTCGTAGTACAGTCCTaGGGTCAAGTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRVVVQS*GQVSFP
Trigger: AGGGAAAGAGACTTGACCCCAGGACTGTACTACGAC...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTGTCGTAGTACAGTCCTaGGGTCAAGTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSVVVQS*GQVSFP
Trigger: AGGGAAAGAGACTTGACCCCAGGACTGTACTACGAC...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAGAGGAAGCAGTCCAGTaGGGGACTTTGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSEEAVQ*GTLSAV
Trigger: CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAATCAGCAGCAAGTCCTaGTCAGTGGTCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLISSKS*SVVSWS
Trigger: AGACCAGCTGACCACTGATCAGGACTTGCTGCTGAT...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATCAGCAGCAAGTCCTaGTCAGTGGTCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPSEFLVATCLHTELMGKISSKS*SVVSWS
Trigger: AGACCAGCTGACCACTGATCAGGACTTGCTGCTGAT...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCT +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLDGPCW*QDPPTA
Trigger: AGCTGTTGGTGGATCTTGTCACCAGCATGGACCATC...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGCAGTTTGCCACTGTCTaGAGGTTCATAGCGGTCAAT +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGQFATV*RFIAVN
Trigger: ATTGACCGCTATGAACCTTCAGACAGTGGCAAACTG...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTAGATGTCGGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTGATGACTGGGTAGTCTaGTGTCTGGAAGGCATACTG +
Preference number: 4 (lower is better)
Translates to: VDVGMGLSLQQEEEGNSSDDWVV*CLEGIL
Trigger: CAGTATGCCTTCCAGACATCAGACTACCCAGTCATC...ACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACCGACATCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTCTCCAGGGACAAGATaGCTGGGTAGTCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWASPGTR*LGSLMS
Trigger: AGACATCAGACTACCCAGTCATCTTGTCCCTGGAGA...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTCCTTTGAATGTGTaGAGCTGCGGAATGAGACAG +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSAPLNV*SCGMRQ
Trigger: CTGTCTCATTCCGCAGCTTCACACATTCAAAGGAGC...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTGTGGTAGTGCTCCTTTaGATGTGTGAAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLVVVLL*MCEAAE
Trigger: TTCCGCAGCTTCACACATTCAAAGGAGCACTACCAC...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCGTGGTAGTGCTCCTTTaGATGTGTGAAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLVVVLL*MCEAAE
Trigger: TTCCGCAGCTTCACACATTCAAAGGAGCACTACCAC...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTGGAGTTGCTGACCGCTaGTCACCTGGATTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPGVADR*SPGLRE
Trigger: CTCTCTTAATCCAGGTGATCAGCGGTCAGCAACTCC...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTCAAGGCAGGGTGTACTaGCCAATAAAGTCATTTCGG +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRQGRVY*PIKSFR
Trigger: CCGAAATGACTTTATTGGTCAGTACACCCTGCCTTG...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAAGCTGGGCGGAGGCTaGTGCCATCTTTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPKLGGG*CHLWTA
Trigger: TGCTGTCCAAAGATGGCATCAGCCTCCGCCCAGCTT...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCTGGGGATGGAGGGGATaGTGCTTCTTTAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVWGWRG*CFFRFL
Trigger: GAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCA...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAGSLEP*FILPLA
Trigger: AGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCC...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATTTTGGACCTCACCTTaGGCATCGGCATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLFWTSP*ASACLP
Trigger: AGGAAGGCATGCCGATGCGCAAGGTGAGGTCCAAAA...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp CTCCAGTATAGAGTACACAAAGGAAAAGGGCAGGAAAGATACCAAAGGCTTATGCTGGCCTGCCGTGCATaGCAGACTGTCATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LQYRVHKGKGQERYQRLMLACRA*QTVMPS
Trigger: TGACGGCATGACAGTCTGGCATGCACGGCAGGCCAG...CATAAGCCTTTGGTATCTTTCCTGCCCTTTTCCTTTGTGTACTCTATACTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAACAATGGTGAAGCCCTaGTCCAGGGGGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPTMVKP*SRGSSS
Trigger: AGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGT...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTCAGTCTCTCTCCTTCTaGTCCTCTTGGAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAQSLSF*SSWRKS
Trigger: GGATTTCCTCCAAGAGGAGCAGAAGGAGAGAGACTG...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAGCCCCGCACATGCCGCAGTTTaGCACTGTCTGAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: EVGDGGDDASLGFSIPSPAHAAV*HCLKVH
Trigger: ATGAACCTTCAGACAGTGGCAAACTGCGGCATGTGC...GGGGCTTGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTGTCCATTTCAAGCCCTaGAGTCTGCATATTCATGGC +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRVHFKP*SLHIHG
Trigger: GCCATGAATATGCAGACTGCAGGGCTTGAAATGGAC...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACCATTCTGGCGGAAATaGCCATCACAGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGPFWRK*PSQMSI
Trigger: AATGGACATCTGTGATGGGCATTTCCGCCAGAATGG...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTGCTTCTTCCAGCTTTTaGACCTCACCTTGCGCATCG +
Preference number: 4 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPASSSF*TSPCAS
Trigger: CGATGCGCAAGGTGAGGTCCAAAAGCTGGAAGAAGC...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AAATTGGAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTCAGAGATTGAGAAGCTaGGCTTGGCACTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KLERDVFIPVGLRRKQSSQRLRS*AWHCPW
Trigger: CCAGGGGCAGTGCCAAGCCCAGCTTCTCAATCTCTG...ACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTCCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417849.5
CDS-3UTR CCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTACCTCGCATCCATATCTaGGCCTCCTCAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLPRIHI*ASSTLL
Trigger: CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGG...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAGGCTCAGTCTCAAACTaGGACTCCAGCGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSGSVSN*DSSANS
Trigger: AGAATTGGCGCTGGAGTCCCAGTTTGAGACTGAGCC...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCCTGTCCTCAGGCCGCTaGGATACACACGGCTTAACT +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSLSSGR*DTHGLT
Trigger: AGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAG...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTATCACGCAGGAAGTCTaGCTTCAGCACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSITQEV*LQHIAT
Trigger: TGTGGCTATGTGCTGAAGCCAGACTTCCTGCGTGAT...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGGGGTGGAAAGAACTCTaGATATCACGCAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGGWKEL*ISRRKS
Trigger: AGACTTCCTGCGTGATATCCAGAGTTCTTTCCACCC...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACACAATGGACCCCTCTTTaGTCTTGTCCACTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTQWTPL*SCPLWG
Trigger: TCCCCAAAGTGGACAAGACCAAAGAGGGGTCCATTG...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTGTTCTCCACATAGTTaGTCTCCTGCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSCSPHS*SPAVLC
Trigger: ACACAGCACGGCAGGAGACCAACTATGTGGAGAACA...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCACAAAACGCAGCATaGCAAGTTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFPQNAA*QVQAPA
Trigger: TGCTGGTGCCTGAACTTGCCATGCTGCGTTTTGTGG...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTCACAAAGATGGAAGCTaGGCGGAGGCTGATGCCATC +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPHKDGS*AEADAI
Trigger: GATGGCATCAGCCTCCGCCCAGCTTCCATCTTTGTG...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCCCCTCCAGGCCTTCCTaGATGCAGATATACACAAAG +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLPSRPS*MQIYTK
Trigger: CTTTGTGTATATCTGCATCCAGGAAGGCCTGGAGGG...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTCCCTCCAGGCCTTCCTaGATGCAGATATACACAAAG +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAPSRPS*MQIYTK
Trigger: CTTTGTGTATATCTGCATCCAGGAAGGCCTGGAGGG...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCATCACCTCTTCCAGTTaGTTCCCTCTTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTITSSS*FPLLTP
Trigger: TGGAGTCAAAAGAGGGAACCAACTGGAAGAGGTGAT...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCGACACAAGATGGGCTTaGATTTCTGCCGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPDTRWA*ISAGTR
Trigger: TCTTGTCCCGGCAGAAATCCAAGCCCATCTTGTGTC...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR TCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTATCAGCAGCAAGTCCTaGTCAGTGGTCAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPISSKS*SVVSWS
Trigger: AGACCAGCTGACCACTGATCAGGACTTGCTGCTGAT...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCGTCATTCTGAAGTCTaGAGTATCTTAGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTRHSEV*SILASS
Trigger: GGAAGAAGCTAAGATACTTCAGACTTCAGAATGACG...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp CTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCTTTTTGTCTCCACGTTaGAACCAATCGCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LIFVSTLKPIAQPLVQALFLSPR*NQSLSH
Trigger: ATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAA...GAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp ATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTGTTTTTGTCTCCACGTTaGAACCAATCGCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: IFVSTLKPIAQPLVQALLFLSPR*NQSLSH
Trigger: ATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAA...CAGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR TCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGCTGCCTGAAAAAGACTaGAGGCATATTCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGLPEKD*RHILGP
Trigger: TGGACCAAGAATATGCCTTCAGTCTTTTTCAGGCAG...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGACGTGTCTGCTGCCTaGAAAAGACTGAAGGCATAT +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTDVSAA*KRLKAY
Trigger: ATATGCCTTCAGTCTTTTTCAGGCAGCAGACACGTC...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCGACGTGTCTGCTGCCTaGAAAAGACTGAAGGCATAT +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPDVSAA*KRLKAY
Trigger: ATATGCCTTCAGTCTTTTTCAGGCAGCAGACACGTC...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTGTTCATAGCGGTCAATaGGTTCCAGAGCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPVHSGQ*VPEQAQ
Trigger: CTGAGCTTGCTCTGGAACTCATTGACCGCTATGAAC...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTCAGTTTGCCACTGTCTaGAGGTTCATAGCGGTCAAT +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLQFATV*RFIAVN
Trigger: ATTGACCGCTATGAACCTTCAGACAGTGGCAAACTG...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTTATGAGAAGAGCAGATaGAGTAGTGGTTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IYTSGAKEEAVQWGTLSAYEKSR*SSGSGV
Trigger: AACCCCTGAACCACTACTTCATCTGCTCTTCTCATA...AGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCTGGCCACGACATCTTTaGACAGGATGCGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFWPRHL*TGCGRS
Trigger: TGACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCA...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCGATGACTGGGTAGTCTaGTGTCTGGAAGGCATACTG +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFDDWVV*CLEGIL
Trigger: CAGTATGCCTTCCAGACATCAGACTACCCAGTCATC...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTTTTGTCCTTATTCTaGAGGTTCTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAFLSLF*RFCSWG
Trigger: GCCCCAGGAGCAGAACCTTCAGAATAAGGACAAAAA...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACTTTTTGTCCTTATTCTaGAGGTTCTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: MPITDVHFKPCSLHIHGHFLSLF*RFCSWG
Trigger: GCCCCAGGAGCAGAACCTTCAGAATAAGGACAAAAA...GTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR TCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTTGTGAAGCTGCGGAATaGGACAGACTTCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRCEAAE*DRLQVD
Trigger: ATCTACTTGAAGTCTGTCTCATTCCGCAGCTTCACA...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACTGGGGATGGAGGGGATaGTGCTTCTTTAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GMGLSLQQEEEGNSSIEYWGWRG*CFFRFL
Trigger: GAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCA...GTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTGCCTGGGCCACAATCTaGCAACAGATAGACGGACAA +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPAWATI*QQIDGQ
Trigger: TTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGC...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR TCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAATGTCGGTATGGGATTaGGCCTACAGCAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLMSVWD*AYSKRK
Trigger: CTTCCTCTTGCTGTAGGCTCAATCCCATACCGACAT...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGCAGAGTCAGCTTCTaGCCATCAGCTGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRSRVSF*PSAEKL
Trigger: AAGTTTTTCAGCTGATGGGCAGAAGCTGACTCTGCT...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAAGCAGAGTCAGCTTCTaGCCATCAGCTGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGSRVSF*PSAEKL
Trigger: AAGTTTTTCAGCTGATGGGCAGAAGCTGACTCTGCT...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAGCACATGCCGCAGTTTaGCACTGTCTGAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSAHAAV*HCLKVH
Trigger: ATGAACCTTCAGACAGTGGCAAACTGCGGCATGTGC...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCGCACATGCCGCAGTTTaGCACTGTCTGAAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFAHAAV*HCLKVH
Trigger: ATGAACCTTCAGACAGTGGCAAACTGCGGCATGTGC...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTGCCAAGTATTGTGCTaGACAAACTCATTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWACQVLC*TNSLPA
Trigger: GGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCA...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCAACTGCCAAGTATTGTaGTGCACAAACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTNCQVL*CTNSLP
Trigger: TGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTT...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCATCAAGCCCTGCAGTCTaGATATTCATGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSSSPAV*IFMATI
Trigger: GATGGTGGCCATGAATATGCAGACTGCAGGGCTTGA...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTGTCCATTTCAAGCCCTaGAGTCTGCATATTCATGGC +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAVHFKP*SLHIHG
Trigger: GCCATGAATATGCAGACTGCAGGGCTTGAAATGGAC...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCCCATTCTGGCGGAAATaGCCATCACAGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPPFWRK*PSQMSI
Trigger: AATGGACATCTGTGATGGGCATTTCCGCCAGAATGG...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACATCTTTCCCTAATCTTTaGTGGGGAAGCCTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTSFPNL*WGSLEP
Trigger: AGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGA...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACGCTTGGCACTGCCCCTaGCCTGCCGTGCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHAWHCP*PAVHAR
Trigger: TCTGGCATGCACGGCAGGCCAGGGGCAGTGCCAAGC...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGAGCAACTCGGAATCATaGCCATTACGTATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGSNSES*PLRIVS
Trigger: GGAGACAATACGTAATGGCCATGATTCCGAGTTGCT...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTAGATCCACCAACAGCTaGAGCCCTCGCATCCATATC +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPRSTNS*SPRIHI
Trigger: GATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTGGGGGTTGTAGTTaGAAGAGTCTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFPGGCS*KSLSSG
Trigger: GCCTGAGGACAGACTCTTCCAACTACAACCCCCAGG...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTCAGTCTGCATATTCATaGCCACCATCTGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPQSAYS*PPSGSL
Trigger: CAGGCTGCCAGATGGTGGCCATGAATATGCAGACTG...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCGGGTGGAAAGAACTCTaGATATCACGCAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPGWKEL*ISRRKS
Trigger: AGACTTCCTGCGTGATATCCAGAGTTCTTTCCACCC...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTGGGTGGAAAGAACTCTaGATATCACGCAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSGWKEL*ISRRKS
Trigger: AGACTTCCTGCGTGATATCCAGAGTTCTTTCCACCC...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGATGGGCTTCTCAGGGTaGAAAGAACTCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: GTLSAVQCSLKSRSTVLGMGFSG*KELWIS
Trigger: TGATATCCAGAGTTCTTTCCACCCTGAGAAGCCCAT...CCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGATGGGCTTCTCAGGGTaGAAAGAACTCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKMGFSG*KELWIS
Trigger: TGATATCCAGAGTTCTTTCCACCCTGAGAAGCCCAT...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTTGGATTAAGAGAGTCTaGGCTTTGAAAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSWIKRV*ALKGLM
Trigger: CATCAGCCCTTTCAAAGCCCAGACTCTCTTAATCCA...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCACAATGGACCCCTCTTTaGTCTTGTCCACTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSQWTPL*SCPLWG
Trigger: TCCCCAAAGTGGACAAGACCAAAGAGGGGTCCATTG...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCATGTTCTCCACATAGTTaGTCTCCTGCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSCSPHS*SPAVLC
Trigger: ACACAGCACGGCAGGAGACCAACTATGTGGAGAACA...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGGTCGTAGTACAGTCCTaGGGTCAAGTCTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SPSEFLVATCLHTELMGKVVVQS*GQVSFP
Trigger: AGGGAAAGAGACTTGACCCCAGGACTGTACTACGAC...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTAGAAGGGAGGACACTTaGGTTCAGAACTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWARREDT*VQNSVA
Trigger: TGCTACTGAGTTCTGAACCCAAGTGTCCTCCCTTCT...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
3UTR CAA 72 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTaGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEA*SLDLSFPWLWA
Trigger: AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
3UTR CAA 72 bp GAAACTCATCTTACCATCCTGATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: ETHLTILIFVST*KPIAQPLVQAL
Trigger: GAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATGGTAAGATGAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444453.5
CDS-3UTR TCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACGTCATTCTGAAGTCTaGAGTATCTTAGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGRHSEV*SILASS
Trigger: GGAAGAAGCTAAGATACTTCAGACTTCAGAATGACG...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGTCATGCCGTCATTCTaGAGTCTGAAGTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSVMPSF*SLKYLS
Trigger: GCTAAGATACTTCAGACTTCAGAATGACGGCATGAC...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTAGATGTCGGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTGTCATGCCGTCATTCTaGAGTCTGAAGTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: VDVGMGLSLQQEEEGNSSVMPSF*SLKYLS
Trigger: GCTAAGATACTTCAGACTTCAGAATGACGGCATGAC...ACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACCGACATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCAGGTGCAATAACCGCTaGACTTCTTGGAAACTCATC +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLRCNNR*TSWKLI
Trigger: GATGAGTTTCCAAGAAGTTCAGCGGTTATTGCACCT...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTAGATGTCGGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTAGGTGCAATAACCGCTaGACTTCTTGGAAACTCATC +
Preference number: 4 (lower is better)
Translates to: VDVGMGLSLQQEEEGNSSRCNNR*TSWKLI
Trigger: GATGAGTTTCCAAGAAGTTCAGCGGTTATTGCACCT...ACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACCGACATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTCTGCCTGAAAAAGACTaGAGGCATATTCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLLPEKD*RHILGP
Trigger: TGGACCAAGAATATGCCTTCAGTCTTTTTCAGGCAG...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTATGAGAAGAGCAGATaGAGTAGTGGTTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAYEKSR*SSGSGV
Trigger: AACCCCTGAACCACTACTTCATCTGCTCTTCTCATA...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACATATGAGAAGAGCAGATaGAGTAGTGGTTCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTYEKSR*SSGSGV
Trigger: AACCCCTGAACCACTACTTCATCTGCTCTTCTCATA...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCGTGGTAGTGCTCCTTTaGATGTGTGAAGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSVVVLL*MCEAAE
Trigger: TTCCGCAGCTTCACACATTCAAAGGAGCACTACCAC...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAACTTTGGGGAGTTGCTaGCCGCTGATCACCTGGATT +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPTLGSC*PLITWI
Trigger: AATCCAGGTGATCAGCGGTCAGCAACTCCCCAAAGT...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ATTGGAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGCAAGGCAGGGTGTACTaGCCAATAAAGTCATTTCGG +
Preference number: 4 (lower is better)
Translates to: IGERCIYTSGAKEEAVQWQGRVY*PIKSFR
Trigger: CCGAAATGACTTTATTGGTCAGTACACCCTGCCTTG...CCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417849.5
CDS-3UTR TCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTACAAGGCAGGGTGTACTaGCCAATAAAGTCATTTCGG +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLQGRVY*PIKSFR
Trigger: CCGAAATGACTTTATTGGTCAGTACACCCTGCCTTG...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTGGAAGCCTTGAGCCTTaGTTTATCCTTCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPGSLEP*FILPLA
Trigger: AGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCC...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAGCCTTCACACAGAGTTaGTGGGAAAGATTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGAFTQS*WERLVV
Trigger: TACAACTAATCTTTCCCATCAACTCTGTGTGAAGGC...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTCTGGGACGTGTCTGCTaGCTGAAAAAGACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLLGRVC*LKKTEG
Trigger: GCCTTCAGTCTTTTTCAGGCAGCAGACACGTCCCAG...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCAGCAGAGTCAGCTTCTaGCCATCAGCTGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLSRVSF*PSAEKL
Trigger: AAGTTTTTCAGCTGATGGGCAGAAGCTGACTCTGCT...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTGAGCAAGCTCAGAGGTaGAGTCTCTCTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLEQAQR*SLSPSA
Trigger: AGCAGAAGGAGAGAGACTGCACCTCTGAGCTTGCTC...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTCCATACTCAGCACATaGCGCAGTTTGCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSSILST*RSLPLS
Trigger: AGACAGTGGCAAACTGCGGCATGTGCTGAGTATGGA...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp AAATTGGAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTTATATCCCTCGACGCTaGTCTGGCCACAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLERDVFIPVGLRRKQSSYIPRR*SGHKAG
Trigger: ACCAGCTTTGTGGCCAGAGCAGCGTCGAGGGATATA...ACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417849.5
CDS-3UTR GCA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTTACACACGGCTTAACTaGCAAGTATTGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSYTRLN*QVLCCT
Trigger: TGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTA...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGTCAAGCCCTGCAGTCTaGATATTCATGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: VATCLHTELMGKISCRCRSSPAV*IFMATI
Trigger: GATGGTGGCCATGAATATGCAGACTGCAGGGCTTGA...CCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACCCATTCTGGCGGAAATaGCCATCACAGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: GMGLSLQQEEEGNSSIEYPFWRK*PSQMSI
Trigger: AATGGACATCTGTGATGGGCATTTCCGCCAGAATGG...GTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACGGAAACATAGTGTCTaGCCCCAGTATGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGRKHSV*PQYGLK
Trigger: TTTTAATCCATACTGGGGGCAGACACTATGTTTCCG...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGATTTCTAGTTGCAACCTaGCTTCACACAGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGFLVAT*LHTELM
Trigger: CATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGTTTCTAGTTGCAACCTaGCTTCACACAGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKFLVAT*LHTELM
Trigger: CATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAGCAAGTCCTGATCAGTaGTCAGCTGGTCTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPASPDQ*SAGLAA
Trigger: TGCTGCAAGACCAGCTGACCACTGATCAGGACTTGC...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCAGATCCACCAACAGCTaGAGCCCTCGCATCCATATC +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFRSTNS*SPRIHI
Trigger: GATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTGGGCTGGACACAAGATaGGCTTGGATTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLGLDTR*AWISSF
Trigger: AAAAGAAGAAATCCAAGCCCATCTTGTGTCCAGCCC...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTGGATTAAGAGAGTCTaGGCTTTGAAAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAWIKRV*ALKGLM
Trigger: CATCAGCCCTTTCAAAGCCCAGACTCTCTTAATCCA...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACTGTTCTCCACATAGTTaGTCTCCTGCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: YGIEPTARGRRELQYRVHCSPHS*SPAVLC
Trigger: ACACAGCACGGCAGGAGACCAACTATGTGGAGAACA...GTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCCACAAAACGCAGCATaGCAAGTTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNPQNAA*QVQAPA
Trigger: TGCTGGTGCCTGAACTTGCCATGCTGCGTTTTGTGG...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTCCCTCCAGGCCTTCCTaGATGCAGATATACACAAAG +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPPSRPS*MQIYTK
Trigger: CTTTGTGTATATCTGCATCCAGGAAGGCCTGGAGGG...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATCTCCACATCAGAGATTaGGAAGCTGGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHLHIRD*EAGLGT
Trigger: AGTGCCAAGCCCAGCTTCTCAATCTCTGATGTGGAG...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACTGGTCCAGGCGCTCCTaGTGGTCCATGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHWSRRS*WSMLVT
Trigger: TGTCACCAGCATGGACCATCAGGAGCGCCTGGACCA...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTAGATGTCGGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTCTTCTGCCCATCAGCTaGAAAACTTTCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: VDVGMGLSLQQEEEGNSSLLPIS*KTFKQF
Trigger: GAACTGTTTGAAAGTTTTTCAGCTGATGGGCAGAAG...ACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACCGACATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATGTTCATAGCGGTCAATaGGTTCCAGAGCAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNVHSGQ*VPEQAQ
Trigger: CTGAGCTTGCTCTGGAACTCATTGACCGCTATGAAC...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTTCTCCAGGGACAAGATaGCTGGGTAGTCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLSPGTR*LGSLMS
Trigger: AGACATCAGACTACCCAGTCATCTTGTCCCTGGAGA...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTTTTTGTCCTTATTCTaGAGGTTCTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPFLSLF*RFCSWG
Trigger: GCCCCAGGAGCAGAACCTTCAGAATAAGGACAAAAA...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTTTTGTCCTTATTCTaGAGGTTCTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSFLSLF*RFCSWG
Trigger: GCCCCAGGAGCAGAACCTTCAGAATAAGGACAAAAA...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCATGTGAAGCTGCGGAATaGGACAGACTTCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSCEAAE*DRLQVD
Trigger: ATCTACTTGAAGTCTGTCTCATTCCGCAGCTTCACA...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAGCTCCTTTGAATGTGTaGAGCTGCGGAATGAGACAG +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPAPLNV*SCGMRQ
Trigger: CTGTCTCATTCCGCAGCTTCACACATTCAAAGGAGC...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp ACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGTATGGGCAAGGCAGGGTGTACTaGCCAATAAAGTCATTTCGG +
Preference number: 4 (lower is better)
Translates to: TCLHTELMGKISCRCRYGQGRVY*PIKSFR
Trigger: CCGAAATGACTTTATTGGTCAGTACACCCTGCCTTG...CCCATACCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATATTCCAAGCCCCTCTaGATTTCTAGTTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLYSKPL*ISSCNL
Trigger: CAGGTTGCAACTAGAAATTCAGAGGGGCTTGGAATA...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCTATTCCAAGCCCCTCTaGATTTCTAGTTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFYSKPL*ISSCNL
Trigger: CAGGTTGCAACTAGAAATTCAGAGGGGCTTGGAATA...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCTTTCAAACAGTTCCTaGACCTCAGCACGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFLSNSS*TSARLV
Trigger: GACTAAACGTGCTGAGGTGCAGGAACTGTTTGAAAG...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCACAGTCTCTCTCCTTCTaGTCCTCTTGGAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPQSLSF*SSWRKS
Trigger: GGATTTCCTCCAAGAGGAGCAGAAGGAGAGAGACTG...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGCCAAGTATTGTGCTaGACAAACTCATTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPCQVLC*TNSLPA
Trigger: GGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCA...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCTACACACGGCTTAACTaGCAAGTATTGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: EMPITDVHFKPCSLHIHGYTRLN*QVLCCT
Trigger: TGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTA...GCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR GCA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTCGGAAACATAGTGTCTaGCCCCAGTATGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: IFAGEALSLDLSFPWLWARKHSV*PQYGLK
Trigger: TTTTAATCCATACTGGGGGCAGACACTATGTTTCCG...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACACGGAAACATAGTGTCTaGCCCCAGTATGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTRKHSV*PQYGLK
Trigger: TTTTAATCCATACTGGGGGCAGACACTATGTTTCCG...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAAGCAACTCGGAATCATaGCCATTACGTATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLSNSES*PLRIVS
Trigger: GGAGACAATACGTAATGGCCATGATTCCGAGTTGCT...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATGGCTCAGTCTCAAACTaGGACTCCAGCGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHGSVSN*DSSANS
Trigger: AGAATTGGCGCTGGAGTCCCAGTTTGAGACTGAGCC...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAATCACGCAGGAAGTCTaGCTTCAGCACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPITQEV*LQHIAT
Trigger: TGTGGCTATGTGCTGAAGCCAGACTTCCTGCGTGAT...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCATGGGCTTCTCAGGGTaGAAAGAACTCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFMGFSG*KELWIS
Trigger: TGATATCCAGAGTTCTTTCCACCCTGAGAAGCCCAT...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTGTCTGCCCCCAGTATaGATTAAAACCATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPCLPPV*IKTIVL
Trigger: GAGAACAATGGTTTTAATCCATACTGGGGGCAGACA...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCGTCATTCTGAAGTCTaGAGTATCTTAGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFRHSEV*SILASS
Trigger: GGAAGAAGCTAAGATACTTCAGACTTCAGAATGACG...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCGTCATGCCGTCATTCTaGAGTCTGAAGTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSVMPSF*SLKYLS
Trigger: GCTAAGATACTTCAGACTTCAGAATGACGGCATGAC...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTTTTGTCTCCACGTTaGAACCAATCGCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSFLSPR*NQSLSH
Trigger: ATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAA...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATTGGGGATGGAGGGGATaGTGCTTCTTTAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHWGWRG*CFFRFL
Trigger: GAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCA...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATATGTCGGTATGGGATTaGGCCTACAGCAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHMSVWD*AYSKRK
Trigger: CTTCCTCTTGCTGTAGGCTCAATCCCATACCGACAT...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCGCCTTCACACAGAGTTaGTGGGAAAGATTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFAFTQS*WERLVV
Trigger: TACAACTAATCTTTCCCATCAACTCTGTGTGAAGGC...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCAGACTGGGACGTGTCTaGTGCCTGAAAAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFRLGRV*CLKKTE
Trigger: TTCAGTCTTTTTCAGGCAGCAGACACGTCCCAGTCT...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGCACGTTTAGTCAATaGCTTATAGAACTGTACGAA +
Preference number: 4 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRSTFSQ*LIELYE
Trigger: TTCGTACAGTTCTATAAGGCATTGACTAAACGTGCT...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATATATCCCTCGACGCTaGTCTGGCCACAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FLVATCLHTELMGKISCRYIPRR*SGHKAG
Trigger: ACCAGCTTTGTGGCCAGAGCAGCGTCGAGGGATATA...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTTGCCAAGTATTGTGCTaGACAAACTCATTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLCQVLC*TNSLPA
Trigger: GGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCA...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAAACTGCCAAGTATTGTaGTGCACAAACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLNCQVL*CTNSLP
Trigger: TGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTT...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACTACACACGGCTTAACTaGCAAGTATTGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: YGIEPTARGRRELQYRVHYTRLN*QVLCCT
Trigger: TGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTA...GTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGAGGTAACCTTGTTGCATaGAGGTCCAAGGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FLVATCLHTELMGKISCRGNLVA*RSKAGC
Trigger: ACACCCTGCCTTGGACCTGCATGCAACAAGGTTACC...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGAATGAGGTAATTTTGTaGCTAGGAATGCACAATCCA +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKNEVIL*LGMHNP
Trigger: TGGATTGTGCATTCCTAGGCACAAAATTACCTCATT...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp ATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACCATCTGTGCCAAGTATTGTGCTaGACAAACTCATTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ITDVHFKPCSLHIHGHHLCQVLC*TNSLPS
Trigger: AGAAGGCAATGAGTTTGTGCAGCACAATACTTGGCA...CAGATGGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CCA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACCAGAGATTGAGAAGCTaGGCTTGGCACTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHQRLRS*AWHCPW
Trigger: CCAGGGGCAGTGCCAAGCCCAGCTTCTCAATCTCTG...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGCTGAAGGCATATTCTTaGTCCATTTCCACATTCATT +
Preference number: 4 (lower is better)
Translates to: GEALSLDLSFPWLWALRKLKAYS*SISTFI
Trigger: AATGAATGTGGAAATGGACCAAGAATATGCCTTCAG...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTGGGCTGGACACAAGATaGGCTTGGATTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPGLDTR*AWISSF
Trigger: AAAAGAAGAAATCCAAGCCCATCTTGTGTCCAGCCC...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATATCACGCAGGAAGTCTaGCTTCAGCACATAGCCACA +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHITQEV*LQHIAT
Trigger: TGTGGCTATGTGCTGAAGCCAGACTTCCTGCGTGAT...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGATTAAGAGAGTCTaGGCTTTGAAAGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPWIKRV*ALKGLM
Trigger: CATCAGCCCTTTCAAAGCCCAGACTCTCTTAATCCA...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGTGTCTGCCCCCAGTATaGATTAAAACCATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SPSEFLVATCLHTELMGKCLPPV*IKTIVL
Trigger: GAGAACAATGGTTTTAATCCATACTGGGGGCAGACA...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCTGTCTGCCCCCAGTATaGATTAAAACCATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFCLPPV*IKTIVL
Trigger: GAGAACAATGGTTTTAATCCATACTGGGGGCAGACA...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTTTTTTGTCTCCACGTTaGAACCAATCGCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLFLSPR*NQSLSH
Trigger: ATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAA...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATTTTTTGTCTCCACGTTaGAACCAATCGCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNFLSPR*NQSLSH
Trigger: ATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAA...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTAGGTGCAATAACCGCTaGACTTCTTGGAAACTCATC +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLRCNNR*TSWKLI
Trigger: GATGAGTTTCCAAGAAGTTCAGCGGTTATTGCACCT...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp TATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACCTTCTGCCCATCAGCTaGAAAACTTTCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: YGIEPTARGRRELQYRVHLLPIS*KTFKQF
Trigger: GAACTGTTTGAAAGTTTTTCAGCTGATGGGCAGAAG...GTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACTGGCCACGACATCTTTaGACAGGATGCGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHWPRHL*TGCGRS
Trigger: TGACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCA...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATTGTGAAGCTGCGGAATaGGACAGACTTCAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNCEAAE*DRLQVD
Trigger: ATCTACTTGAAGTCTGTCTCATTCCGCAGCTTCACA...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCTATTCCAAGCCCCTCTaGATTTCTAGTTGCAACCTC +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFYSKPL*ISSCNL
Trigger: GAGGTTGCAACTAGAAATTCAGAGGGGCTTGGAATA...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417849.5
CDS-3UTR TCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTTATTCCAAGCCCCTCTaGATTTCTAGTTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLYSKPL*ISSCNL
Trigger: CAGGTTGCAACTAGAAATTCAGAGGGGCTTGGAATA...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp CTCCAGTATAGAGTACACAAAGGAAAAGGGCAGGAAAGATACCAAAGGCTTATGGTCCATTTCAAGCCCTaGAGTCTGCATATTCATGGC +
Preference number: 4 (lower is better)
Translates to: LQYRVHKGKGQERYQRLMVHFKP*SLHIHG
Trigger: GCCATGAATATGCAGACTGCAGGGCTTGAAATGGAC...CATAAGCCTTTGGTATCTTTCCTGCCCTTTTCCTTTGTGTACTCTATACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTAGATGTCGGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTAATGAGGTAATTTTGTaGCTAGGAATGCACAATCCA +
Preference number: 4 (lower is better)
Translates to: VDVGMGLSLQQEEEGNSSNEVIL*LGMHNP
Trigger: TGGATTGTGCATTCCTAGGCACAAAATTACCTCATT...ACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACCGACATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGACAATGGACCCCTCTTTaGTCTTGTCCACTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLVATCLHTELMGKISCRQWTPL*SCPLWG
Trigger: TCCCCAAAGTGGACAAGACCAAAGAGGGGTCCATTG...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp ACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGTATGGGTGTCTGCCCCCAGTATaGATTAAAACCATTGTTCTC +
Preference number: 4 (lower is better)
Translates to: TCLHTELMGKISCRCRYGCLPPV*IKTIVL
Trigger: GAGAACAATGGTTTTAATCCATACTGGGGGCAGACA...CCCATACCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCGATTTATCCTTCCCTTaGCTTTGGGCTTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFDLSFP*LWALRK
Trigger: CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATC...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAGCACGTTTAGTCAATaGCTTATAGAACTGTACGAA +
Preference number: 4 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPSTFSQ*LIELYE
Trigger: TTCGTACAGTTCTATAAGGCATTGACTAAACGTGCT...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTAACTGCCAAGTATTGTaGTGCACAAACTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLNCQVL*CTNSLP
Trigger: TGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTT...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCACGGAAACATAGTGTCTaGCCCCAGTATGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPRKHSV*PQYGLK
Trigger: TTTTAATCCATACTGGGGGCAGACACTATGTTTCCG...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR GCA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATTTTCTAGTTGCAACCTaGCTTCACACAGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNFLVAT*LHTELM
Trigger: CATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATAGCAACTCGGAATCATaGCCATTACGTATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHSNSES*PLRIVS
Trigger: GGAGACAATACGTAATGGCCATGATTCCGAGTTGCT...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACGGCTCAGTCTCAAACTaGGACTCCAGCGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHGSVSN*DSSANS
Trigger: AGAATTGGCGCTGGAGTCCCAGTTTGAGACTGAGCC...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATGATTTATCCTTCCCTTaGCTTTGGGCTTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHDLSFP*LWALRK
Trigger: CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATC...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR CAA 72 bp TCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTaGATGGGAAAGATTAGTTGTAGATGTCGGTATGGG +
Preference number: 4 (lower is better)
Translates to: SEFLVATCLHTE*MGKISCRCRYG
Trigger: CCCATACCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR TCA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACGCTCCTTTGAATGTGTaGAGCTGCGGAATGAGACAG +
Preference number: 4 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHAPLNV*SCGMRQ
Trigger: CTGTCTCATTCCGCAGCTTCACACATTCAAAGGAGC...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR TCA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATGCCTTCACACAGAGTTaGTGGGAAAGATTAGTTGTA +
Preference number: 4 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHAFTQS*WERLVV
Trigger: TACAACTAATCTTTCCCATCAACTCTGTGTGAAGGC...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACAGCACGTTTAGTCAATaGCTTATAGAACTGTACGAA +
Preference number: 4 (lower is better)
Translates to: YGIEPTARGRRELQYRVHSTFSQ*LIELYE
Trigger: TTCGTACAGTTCTATAAGGCATTGACTAAACGTGCT...GTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR GCA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: FLVATCLHTELMGKISCRYTRLN*QVLCCT
Trigger: TGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTA...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCCTGAAGGCATATTCTTaGTCCATTTCCACATTCATT +
Preference number: 4 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSLKAYS*SISTFI
Trigger: AATGAATGTGGAAATGGACCAAGAATATGCCTTCAG...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CCA 90 bp AAATTGGAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTCTGAAGGCATATTCTTaGTCCATTTCCACATTCATT +
Preference number: 4 (lower is better)
Translates to: KLERDVFIPVGLRRKQSSLKAYS*SISTFI
Trigger: AATGAATGTGGAAATGGACCAAGAATATGCCTTCAG...ACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTCCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417849.5
CDS-3UTR GCA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACCTTTCAAACAGTTCCTaGACCTCAGCACGTTTAGTC +
Preference number: 4 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHLSNSS*TSARLV
Trigger: GACTAAACGTGCTGAGGTGCAGGAACTGTTTGAAAG...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
3UTR CAA 72 bp GGTCCCAGATTGCTTGTTAGGAAGAATGAGGTAATTTaGTGCCTAGGAATGCACAATCCAAAGCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: GPRLLVRKNEVI*CLGMHNPKLDF
Trigger: AAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTTCCTAACAAGCAATCTGGGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS GCA 90 bp CCTCAGGCGAGGGCAGCTGAGTGGGCAGCACCCCATCCAAGGTGGTaGTCAGCAGCTGCTCCCCCAGGATCTCAGTCAGATGACGGGCCA +
Preference number: 5 (lower is better)
Translates to: PQARAAEWAAPHPRW*SAAAPPGSQSDDGP
Trigger: TGGCCCGTCATCTGACTGAGATCCTGGGGGAGCAGCTGCTGAGCACCACCTTGGATGGGGTGCTGCCCACTCAGCTGCCCTCGCCTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000458239.1
ENST00000459791.5
ENST00000473443.5
CDS TCA 90 bp ACCCCCACCCTGACTCCATCCTGCCGATACTGGTCCAGGCGCTCCTaGTGGTCCATGCTGGTGACAAGATCCACCAACAGCTGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: TPTLTPSCRYWSRRS*WSMLVTRSTNSWSP
Trigger: AGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAGTATCGGCAGGATGGAGTCAGGGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473443.5
CDS-3UTR CAA 90 bp TCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTGTTGGCCATCAGGTCCAGGTaGGAGCGGCGGCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: STNSWSPRIHIWASSTLLAIRSR*ERRPWK
Trigger: CTTCCATGGCCGCCGCTCCAACCTGGACCTGATGGC...CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp AGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTGGCCATCAGGTCCAGGTaGGAGCGGCGGCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: RSTNSWSPRIHIWASSTLAIRSR*ERRPWK
Trigger: CTTCCATGGCCGCCGCTCCAACCTGGACCTGATGGC...CAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp GGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAGTGGTCAGCTGGTCTaGCAGCAGGGACGCCATCAC +
Preference number: 5 (lower is better)
Translates to: GDKIHQQLEPSHPYLGLLSGQLV*QQGRHH
Trigger: GTGATGGCGTCCCTGCTGCAAGACCAGCTGACCACT...GAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS TCA 90 bp CCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGTaGAATGCCCACCTCAGGACTCATCCCCCTCCAGGCCTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PDVSPRLKPAHQPFP*NAHLRTHPPPGLPG
Trigger: TCCAGGAAGGCCTGGAGGGGGATGAGTCCTGAGGTGGGCATTTCACGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS TCA 90 bp CATCCTGCCGATACTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGG +
Preference number: 5 (lower is better)
Translates to: HPADTGPGAPDGPCW*QDPPTAGALASISG
Trigger: CCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAGTATCGGCAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473443.5
CDS GCA 90 bp TGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGTGAAATaGCCACCTCAGGACTCATCCCCCTCCAGGCCTTCCTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: CFSPSKASTPTLPVK*PPQDSSPSRPSWMQ
Trigger: CTGCATCCAGGAAGGCCTGGAGGGGGATGAGTCCTGAGGTGGGCATTTCACGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS CCA 90 bp CTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTaGGCCTCCTCAACACTGTTGGCCATCAGGTCCAGGTTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: LVTRSTNSWSPRIHI*ASSTLLAIRSRLER
Trigger: CCGCTCCAACCTGGACCTGATGGCCAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000444453.5
ENST00000446503.5
ENST00000450993.7
ENST00000465713.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS-3UTR CAA 90 bp GCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCGCCTCCTCAACACTGTaGGCCATCAGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: AGDKIHQQLEPSHPYLGLASSTL*AIRSRL
Trigger: CAACCTGGACCTGATGGCCAACAGTGTTGAGGAGGC...GAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp GGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCGCCTCCTCAACACTGTaGGCCATCAGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GDKIHQQLEPSHPYLGLLASSTL*AIRSRL
Trigger: CAACCTGGACCTGATGGCCAACAGTGTTGAGGAGGC...GAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp CCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACAGCCAATCGCTCAGCCATaGGTCCAGGCGCTCCTGATG +
Preference number: 5 (lower is better)
Translates to: PLVQALLMVHAGDKIHQQPIAQP*VQALLM
Trigger: CATCAGGAGCGCCTGGACCAATGGCTGAGCGATTGG...CTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS TCA 90 bp CTGCCTTTCCTAAACCTGTTGCATCTGGCTCCTTCAGGGATAGCGTaGTCCCTCACCCCCACCCTGACTCCATCCTGCCGATACTGGTCC +
Preference number: 5 (lower is better)
Translates to: LPFLNLLHLAPSGIA*SLTPTLTPSCRYWS
Trigger: GGACCAGTATCGGCAGGATGGAGTCAGGGTGGGGGTGAGGGATCACGCTATCCCTGAAGGAGCCAGATGCAACAGGTTTAGGAAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473443.5
CDS GCA 90 bp GCCATGGAAGACAATGGTGAAGCCCTGCTCCAGGGGGAGCTCCTCTaGCAGGCTACGCAGCAACTCGGAATCATGGCCATTACGTATTGT +
Preference number: 5 (lower is better)
Translates to: AMEDNGEALLQGELL*QATQQLGIMAITYC
Trigger: ACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGTCTTCCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000444453.5
ENST00000446503.5
ENST00000450993.7
ENST00000465713.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS CCA 90 bp TTGTCTCCACATCAGAGATTGAGAAGCTGGGCTTGGCACTGCCCCTaGCCTGCCGTGCATGCCAGACTGTCATGCCGTCATTCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: LSPHQRLRSWAWHCP*PAVHARLSCRHSEV
Trigger: GACTTCAGAATGACGGCATGACAGTCTGGCATGCACGGCAGGCCAGGGGCAGTGCCAAGCCCAGCTTCTCAATCTCTGATGTGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS-3UTR CAA 90 bp GCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCTCTCTTTTGCTCCCCTaGCACTGGCTTGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: AGDKIHQQLEPSHPYLGLSLLLP*HWLVSS
Trigger: GGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAGA...GAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp AGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCGCCATCAGGTCCAGGTaGGAGCGGCGGCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: SAVQCSLKSRSTVLGSSLAIRSR*ERRPWK
Trigger: CTTCCATGGCCGCCGCTCCAACCTGGACCTGATGGC...GAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGTCCACTTTGGGGAGTaGCTGACCGCTGATCACCTG +
Preference number: 5 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPVHFGE*LTADHL
Trigger: CAGGTGATCAGCGGTCAGCAACTCCCCAAAGTGGAC...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGACAATGGACCCCTCTTaGGTCTTGTCCACTTTGGGG +
Preference number: 5 (lower is better)
Translates to: TSGAKEEAVQWGTLSAVQTMDPS*VLSTLG
Trigger: CCCCAAAGTGGACAAGACCAAAGAGGGGTCCATTGT...CTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS TCA 90 bp CATAGAGCCTTCTCCATCCATGGGGACACTGCTGCAAGCTCACGCTaGTCTCTACCCATACTTCAGCCCACCCGACTCACAGTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: HRAFSIHGDTAASSR*SLPILQPTRLTVLP
Trigger: TGGAAGGACTGTGAGTCGGGTGGGCTGAAGTATGGGTAGAGATCAGCGTGAGCTTGCAGCAGTGTCCCCATGGATGGAGAAGGCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459791.5
CDS TCA 90 bp TGCACTGGCTTGTTTCCTCCCCTCTTCTACAGCAGCTGGCTGCTGTaGCTGGCAAGTTATAGCCGGAGGGAAGCAGTAAGAAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: CTGLFPPLFYSSWLL*LASYSRREAVRRGE
Trigger: CTCTCCCCTTCTTACTGCTTCCCTCCGGCTATAACTTGCCAGTCACAGCAGCCAGCTGCTGTAGAAGAGGGGAGGAAACAAGCCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483685.5
CDS TCA 90 bp GAAGCTCCTGGAAGGCATACTGTGCTACTGTGGCCACGACATCTTTaGACAGGATGCGGGAGGTCAGGGTGTGTCCGTGGTAAACGACAG +
Preference number: 5 (lower is better)
Translates to: EAPGRHTVLLWPRHL*TGCGRSGCVRGKRQ
Trigger: CTGTCGTTTACCACGGACACACCCTGACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCACAGTAGCACAGTATGCCTTCCAGGAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497482.1
CDS CCA 90 bp TCCAGGGGGAGCTCCTCTGCCAGGCTACGCAGCAACTCGGAATCATaGCCATTACGTATTGTCTCCACATCAGAGATTGAGAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SRGSSSARLRSNSES*PLRIVSTSEIEKLG
Trigger: GCCCAGCTTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS-3UTR CAA 90 bp GAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTGGTCAGCTGGTCTaGCAGCAGGGACGCCATCAC +
Preference number: 5 (lower is better)
Translates to: EAVQWGTLSAVQCSLKSRSGQLV*QQGRHH
Trigger: GTGATGGCGTCCCTGCTGCAAGACCAGCTGACCACT...ACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAGCCATCAGGTCCAGGTaGGAGCGGCGGCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLAIRSR*ERRPWK
Trigger: CTTCCATGGCCGCCGCTCCAACCTGGACCTGATGGC...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCATTGGTCCAGGCGCTCCTCCAATCGCTCAGCCATaGGTCCAGGCGCTCCTGATG +
Preference number: 5 (lower is better)
Translates to: DFCLHVETNRSAIGPGAPPIAQP*VQALLM
Trigger: CATCAGGAGCGCCTGGACCAATGGCTGAGCGATTGG...AGGAGCGCCTGGACCAATGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTACAATGGACCCCTCTTaGGTCTTGTCCACTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSTMDPS*VLSTLG
Trigger: CCCCAAAGTGGACAAGACCAAAGAGGGGTCCATTGT...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTAATGTGGCGGTAACCTaGTTGCATGCAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSNVAVT*LHAGPR
Trigger: CCTTGGACCTGCATGCAACAAGGTTACCGCCACATT...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp GGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCTCTCCACATCAGAGATaGAGACTTGCGCATCGGCAT +
Preference number: 5 (lower is better)
Translates to: GDKIHQQLEPSHPYLGLLSPHQR*RLAHRH
Trigger: ATGCCGATGCGCAAGTCTCAATCTCTGATGTGGAGA...GAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS TCA 90 bp CTGCCCCTGGCCTGCCGTGCATGCCAGACTGTCATGCCGTCATTCTaGAGTCTGAAGTATCTTAGCTTCTTCCAGCTTTTGGACCTCACC +
Preference number: 5 (lower is better)
Translates to: LPLACRACQTVMPSF*SLKYLSFFQLLDLT
Trigger: GGTGAGGTCCAAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGAATGACGGCATGACAGTCTGGCATGCACGGCAGGCCAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS TCA 90 bp CTGATGTCTGGAAGGCATACTGTGCTACTGTGGCCACGACATCTTTaGACAGGATGCGGGAGGTCAGGGTGTGTCCGTGGTAAACGACAG +
Preference number: 5 (lower is better)
Translates to: LMSGRHTVLLWPRHL*TGCGRSGCVRGKRQ
Trigger: CTGTCGTTTACCACGGACACACCCTGACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCACAGTAGCACAGTATGCCTTCCAGACATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000473443.5
CDS GCA 90 bp AGTGCTCACCAGCACTTACCCATCCAGACCCCTTCAAGCTACATCTaGATAGAGCCTTCTCCATCCATGGGGACACTGCTGCAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SAHQHLPIQTPSSYI*IEPSPSMGTLLQAH
Trigger: GTGAGCTTGCAGCAGTGTCCCCATGGATGGAGAAGGCTCTATGCAGATGTAGCTTGAAGGGGTCTGGATGGGTAAGTGCTGGTGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459791.5
CDS CCA 90 bp TCCAGGGGGAGCTCCTCTGCCAGGCTACGCAGCAACTCGGAATCATaGCCATTACGTATTGTCTCCACATCAGAGATTGAGACTTGCGCA +
Preference number: 5 (lower is better)
Translates to: SRGSSSARLRSNSES*PLRIVSTSEIETCA
Trigger: TGCGCAAGTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000444453.5
ENST00000446503.5
ENST00000473443.5
CDS CCA 90 bp TCCAGGGGGAGCTCCTCTGCCAGGCTACGCAGCAACTCGGAATCATaGCCATTACGTATTGTCTCCACATCAGAGATTGAGAGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SRGSSSARLRSNSES*PLRIVSTSEIERSC
Trigger: GCAAGACCTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465713.5
CDS-3UTR CAA 90 bp GTCCATGCTGGTGACAAGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTGTCTCTTTTGCTCCCCTaGCACTGGCTTGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VHAGDKIHQQLEPSHPYLSLLLP*HWLVSS
Trigger: GGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAGA...CAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCAGTGGTCAGCTGGTCTaGCAGCAGGGACGCCATCAC +
Preference number: 5 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPSGQLV*QQGRHH
Trigger: GTGATGGCGTCCCTGCTGCAAGACCAGCTGACCACT...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GACAGAGAGGTCCATCCTGATTTTTGTCTCCACGTTGAAACCAATCGCTCAGCCAGTGGTCAGCTGGTCTaGCAGCAGGGACGCCATCAC +
Preference number: 5 (lower is better)
Translates to: DREVHPDFCLHVETNRSASGQLV*QQGRHH
Trigger: GTGATGGCGTCCCTGCTGCAAGACCAGCTGACCACT...GGCTGAGCGATTGGTTTCAACGTGGAGACAAAAATCAGGATGGACCTCTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446503.5
CDS-3UTR CAA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCCCAATCGCTCAGCCATaGGTCCAGGCGCTCCTGATG +
Preference number: 5 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPPIAQP*VQALLM
Trigger: CATCAGGAGCGCCTGGACCAATGGCTGAGCGATTGG...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCCAATCGCTCAGCCATaGGTCCAGGCGCTCCTGATG +
Preference number: 5 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVPIAQP*VQALLM
Trigger: CATCAGGAGCGCCTGGACCAATGGCTGAGCGATTGG...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAGTGGCGGTAACCTTGTaGCATGCAGGTCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGVAVTL*HAGPRQ
Trigger: CTGCCTTGGACCTGCATGCAACAAGGTTACCGCCAC...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGAATGTGGCGGTAACCTaGTTGCATGCAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVNVAVT*LHAGPR
Trigger: CCTTGGACCTGCATGCAACAAGGTTACCGCCACATT...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp GAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCAATGTGGCGGTAACCTaGTTGCATGCAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: EHPSRCFSPSKASTPTLPNVAVT*LHAGPR
Trigger: CCTTGGACCTGCATGCAACAAGGTTACCGCCACATT...GGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp CCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAACAGTCTCCACATCAGAGATaGAGACTTGCGCATCGGCAT +
Preference number: 5 (lower is better)
Translates to: PLVQALLMVHAGDKIHQQSPHQR*RLAHRH
Trigger: ATGCCGATGCGCAAGTCTCAATCTCTGATGTGGAGA...CTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS CCA 90 bp CTAGACGAACGCCAAAGATCTGCACTTTCACCAGTGGATCCACAATaGACCCCTCTTTGGTCTTGTCCACTTTGGGGAGTTGCTGACCGC +
Preference number: 5 (lower is better)
Translates to: LDERQRSALSPVDPQ*TPLWSCPLWGVADR
Trigger: GCGGTCAGCAACTCCCCAAAGTGGACAAGACCAAAGAGGGGTCCATTGTGGATCCACTGGTGAAAGTGCAGATCTTTGGCGTTCGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
ENST00000484718.1
CDS-3UTR CAA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAAGTGGTCAGCTGGTCTaGCAGCAGGGACGCCATCAC +
Preference number: 5 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLSGQLV*QQGRHH
Trigger: GTGATGGCGTCCCTGCTGCAAGACCAGCTGACCACT...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTCTTTTGGACCTCACCTaGCGCATCGGCATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSLLDLT*RIGMPS
Trigger: GGAAGGCATGCCGATGCGCAAGGTGAGGTCCAAAAG...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCGCCTCCTCAACACTGTaGGCCATCAGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVASSTL*AIRSRL
Trigger: CAACCTGGACCTGATGGCCAACAGTGTTGAGGAGGC...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AGCCCCTCTGAATTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGCCAATCGCTCAGCCATaGGTCCAGGCGCTCCTGATG +
Preference number: 5 (lower is better)
Translates to: SPSEFLVATCLHTELMGKPIAQP*VQALLM
Trigger: CATCAGGAGCGCCTGGACCAATGGCTGAGCGATTGG...CTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAATTCAGAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTGTGGCCACGACATCTTaGAACAGGATGCGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLVATTS*NRMREV
Trigger: GACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCAC...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTGTGGCCACGACATCTTaGAACAGGATGCGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAVATTS*NRMREV
Trigger: GACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCAC...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTCATTGCCAGCCTCCTaGATGAGGCGCTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSSLPAS*MRRLAL
Trigger: CAAGGCCAAGCGCCTCATCAAGGAGGCTGGCAATGA...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCACTTTGGGGAGTaGCTGACCGCTGATCACCTG +
Preference number: 5 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTVHFGE*LTADHL
Trigger: CAGGTGATCAGCGGTCAGCAACTCCCCAAAGTGGAC...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTGAGGAAGGACCCCTCTTTGGTCTaGTCCACTTTGGGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: GEALSLDLSFPWLWALRKDPSLV*STLGSC
Trigger: GCAACTCCCCAAAGTGGACAAGACCAAAGAGGGGTC...CTTCCTCAAAGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TCTCTCGAGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCACAATGGACCCCTCTTaGGTCTTGTCCACTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SLEHPSRCFSPSKASTPTTMDPS*VLSTLG
Trigger: CCCCAAAGTGGACAAGACCAAAGAGGGGTCCATTGT...GGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCTCGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTGGCGGTAACCTTGTaGCATGCAGGTCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTVAVTL*HAGPRQ
Trigger: CTGCCTTGGACCTGCATGCAACAAGGTTACCGCCAC...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp GAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAGCCCCGTGGCGGTAACCTTGTaGCATGCAGGTCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: EVGDGGDDASLGFSIPSPVAVTL*HAGPRQ
Trigger: CTGCCTTGGACCTGCATGCAACAAGGTTACCGCCAC...GGGGCTTGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTTTTGCTGGGGAAGCCTaGAGCCTTGATTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSFAGEA*SLDLSF
Trigger: GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAA...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS TCA 90 bp TGGCCTGCCGTGCATGCCAGACTGTCATGCCGTCATTCTGAAGTCTaGAGTATCTTAGCTTCTTCCAGCTTTTGGACCTCACCTTGCGCA +
Preference number: 5 (lower is better)
Translates to: WPAVHARLSCRHSEV*SILASSSFWTSPCA
Trigger: TGCGCAAGGTGAGGTCCAAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGAATGACGGCATGACAGTCTGGCATGCACGGCAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS TCA 90 bp AAGAGAAGGGACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTaGCAACAGATAGACGGACAAAACAGCGGGCACGTCACAACCTTC +
Preference number: 5 (lower is better)
Translates to: KRRDSGLEIGAWATI*QQIDGQNSGHVTTF
Trigger: GAAGGTTGTGACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTCCCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS TCA 90 bp TCTCTACTCTGTCCATCCAGACCAGCTTTCCTGCCCCTAGACCCTTaGGCCACTATTCATAACTCCTCTGCCCTTGTCTGCTCTAAGGAG +
Preference number: 5 (lower is better)
Translates to: SLLCPSRPAFLPLDP*ATIHNSSALVCSKE
Trigger: CTCCTTAGAGCAGACAAGGGCAGAGGAGTTATGAATAGTGGCTCAAGGGTCTAGGGGCAGGAAAGCTGGTCTGGATGGACAGAGTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS GCA 90 bp TTGGAAGAGTCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCAGCCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LEESVLRPLGYTRLN*QVLCCTNSLPASLM
Trigger: CATCAAGGAGGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGACTCTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS GCA 90 bp TTGGAAGAGTCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCTGCCAGTCCATCA +
Preference number: 5 (lower is better)
Translates to: LEESVLRPLGYTRLN*QVLCCTNSLPASPS
Trigger: TGATGGACTGGCAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGACTCTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484718.1
CDS CCA 90 bp GTGGTTCAGGGGTTGAGTCATATCCTGATAGATGGGGAGGCAGGCTaGGTTGAAGATGTCTCCATCCTTAGAGCAGAGGTAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: VVQGLSHILIDGEAG*VEDVSILRAEVAEE
Trigger: TTCCTCAGCTACCTCTGCTCTAAGGATGGAGACATCTTCAACCCAGCCTGCCTCCCCATCTATCAGGATATGACTCAACCCCTGAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000469493.5
ENST00000473443.5
CDS CCA 90 bp AGAGTTCCTGGGGGTTGTAGTTGGAAGAGTCTGTCCTCAGGCCGCTaGGATACACACGGCTTAACTGCCAAGTATTGTGCTGCACAAACT +
Preference number: 5 (lower is better)
Translates to: RVPGGCSWKSLSSGR*DTHGLTAKYCAAQT
Trigger: AGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGACTCTTCCAACTACAACCCCCAGGAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000458239.1
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
ENST00000484718.1
CDS-3UTR CAA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTAGCTTCTTCCAGCTTTaGGACCTCACCTTGCGCATC +
Preference number: 5 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSSFFQL*DLTLRI
Trigger: GATGCGCAAGGTGAGGTCCAAAAGCTGGAAGAAGCT...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAGCCTCCTCAACACTGTaGGCCATCAGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSASSTL*AIRSRL
Trigger: CAACCTGGACCTGATGGCCAACAGTGTTGAGGAGGC...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp CAGCCATTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTGACAAGATCCACCAAATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: QPLVQALLMVHAGDKIHQIFVST*KPIAQP
Trigger: TGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT...TTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAATGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp TCCACCAACAGCTGGAGCCCTCGCATCCATATCTGGGCCTCCTCAACACTGTTGATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: STNSWSPRIHIWASSTLLIFVST*KPIAQP
Trigger: TGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT...CAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444453.5
ENST00000446503.5
CDS-3UTR CAA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGGGAGGCAGGCTGGGTaGAAGATGTCTCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTGRQAG*KMSPSL
Trigger: TAAGGATGGAGACATCTTCAACCCAGCCTGCCTCCC...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp CTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCGTGGCCACGACATCTTaGAACAGGATGCGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: LCSVLLRVVVQSWGQVSFVATTS*NRMREV
Trigger: GACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCAC...GAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCATCATTGCCAGCCTCCTaGATGAGGCGCTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSSLPAS*MRRLAL
Trigger: CAAGGCCAAGCGCCTCATCAAGGAGGCTGGCAATGA...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCGACCCCTCTTTGGTCTaGTCCACTTTGGGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPDPSLV*STLGSC
Trigger: GCAACTCCCCAAAGTGGACAAGACCAAAGAGGGGTC...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTATCCTTCCCTTGGCTTaGGGCTTTGAGGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: EEAVQWGTLSAVQCSLKSILPLA*GFEEVG
Trigger: CCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGAT...ACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTGATGTCGGTATGGGATaGAGCCTCAGGACTCATCCC +
Preference number: 5 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSDVGMG*SLRTHP
Trigger: GGGATGAGTCCTGAGGCTCAATCCCATACCGACATC...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457773.1
CDS CCA 90 bp TCTCCTTTGAGAATTTTGAGACTGTGGTCCAGAAGGGAGGACACTTaGGTTCAGAACTCAGTAGCATGCGTGTCCCTCTGCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: SPLRILRLWSRREDT*VQNSVACVSLCSAS
Trigger: TGAGGCTGAGCAGAGGGACACGCATGCTACTGAGTTCTGAACCCAAGTGTCCTCCCTTCTGGACCACAGTCTCAAAATTCTCAAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CAA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCGGCTCCTTTTCTCTTTaGCTCCCCTTGCACTGGCTT +
Preference number: 5 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVGSFSL*LPLHWL
Trigger: AAGCCAGTGCAAGGGGAGCAAAAGAGAAAAGGAGCC...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGCTTTTGGACCTCACCTaGCGCATCGGCATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VATCLHTELMGKISCRCRLLDLT*RIGMPS
Trigger: GGAAGGCATGCCGATGCGCAAGGTGAGGTCCAAAAG...CCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AGCATCCTTCCAGATGTTTCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGGGACACAAGATGGGCTaGGATTTCTTCTTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SILPDVSPRLKPAHQPFPGHKMG*DFFFLS
Trigger: GGACAAAAAGAAGAAATCCAAGCCCATCTTGTGTCC...CGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGAAACATCTGGAAGGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450993.7
CDS-3UTR CAA 90 bp GTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCAAGAGAGTCTGGGCTTaGAAAGGGCTGATGGGCTTC +
Preference number: 5 (lower is better)
Translates to: VQCSLKSRSTVLGSSLFPKRVWA*KGLMGF
Trigger: GAAGCCCATCAGCCCTTTCAAAGCCCAGACTCTCTT...GGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGTATGGGGTCCACTTTGGGGAGTaGCTGACCGCTGATCACCTG +
Preference number: 5 (lower is better)
Translates to: TCLHTELMGKISCRCRYGVHFGE*LTADHL
Trigger: CAGGTGATCAGCGGTCAGCAACTCCCCAAAGTGGAC...CCCATACCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACGTGGCGGTAACCTTGTaGCATGCAGGTCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: YGIEPTARGRRELQYRVHVAVTL*HAGPRQ
Trigger: CTGCCTTGGACCTGCATGCAACAAGGTTACCGCCAC...GTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAGCCCCAATGTGGCGGTAACCTaGTTGCATGCAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: EVGDGGDDASLGFSIPSPNVAVT*LHAGPR
Trigger: CCTTGGACCTGCATGCAACAAGGTTACCGCCACATT...GGGGCTTGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTTCTCTTTTGCTCCCCTaGCACTGGCTTGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPSLLLP*HWLVSS
Trigger: GGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAGA...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCATCTCTTTTGCTCCCCTaGCACTGGCTTGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSSLLLP*HWLVSS
Trigger: GGAGGAAACAAGCCAGTGCAAGGGGAGCAAAAGAGA...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAGCCTCCTCAACACTGTaGGCCATCAGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPASSTL*AIRSRL
Trigger: CAACCTGGACCTGATGGCCAACAGTGTTGAGGAGGC...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTACTGAAGGCATATTCTaGGTCCATTTCCACATTCAT +
Preference number: 5 (lower is better)
Translates to: GAKEEAVQWGTLSAVQCSTEGIF*VHFHIH
Trigger: ATGAATGTGGAAATGGACCAAGAATATGCCTTCAGT...AGAACACTGCACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCGGGAGGCAGGCTGGGTaGAAGATGTCTCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSGRQAG*KMSPSL
Trigger: TAAGGATGGAGACATCTTCAACCCAGCCTGCCTCCC...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAATGAGGCGCTTGGCCTaGGTTTCAGAGAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGMRRLA*VSEKDD
Trigger: ATCATCTTTCTCTGAAACCAAGGCCAAGCGCCTCAT...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTCAGAAGGGAGGACACTaGGGTTCAGAACTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPQKGGH*GSELSS
Trigger: GCTACTGAGTTCTGAACCCAAGTGTCCTCCCTTCTG...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CAA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTGATGTCGGTATGGGATaGAGCCTACAGCAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLDVGMG*SLQQEE
Trigger: TTCCTCTTGCTGTAGGCTCAATCCCATACCGACATC...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTGATGTCGGTATGGGATaGAGCCTACAGCAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSDVGMG*SLQQEE
Trigger: TTCCTCTTGCTGTAGGCTCAATCCCATACCGACATC...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS GCA 90 bp TTGGAAGAGTCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCTTCTTTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LEESVLRPLGYTRLN*QVLCCTNSLPSFCP
Trigger: AGGACAAAAAGAAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGACTCTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS GCA 90 bp TTGGAAGAGTCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCTGTAAAAGGGTAT +
Preference number: 5 (lower is better)
Translates to: LEESVLRPLGYTRLN*QVLCCTNSLPVKGY
Trigger: ATACCCTTTTACAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGACTCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS-3UTR CAA 90 bp GTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCAGCTTCTTCCAGCTTTaGGACCTCACCTTGCGCATC +
Preference number: 5 (lower is better)
Translates to: VKSLSLIFAGEALSLDLSSFFQL*DLTLRI
Trigger: GATGCGCAAGGTGAGGTCCAAAAGCTGGAAGAAGCT...GGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTGGGAGGCAGGCTGGGTaGAAGATGTCTCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLGRQAG*KMSPSL
Trigger: TAAGGATGGAGACATCTTCAACCCAGCCTGCCTCCC...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGTATGGGATCCTTCCCTTGGCTTaGGGCTTTGAGGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: TCLHTELMGKISCRCRYGILPLA*GFEEVG
Trigger: CCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGAT...CCCATACCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp TATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTATAGAGTACACATCCTTCCCTTGGCTTaGGGCTTTGAGGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: YGIEPTARGRRELQYRVHILPLA*GFEEVG
Trigger: CCCAACTTCCTCAAAGCCCAAAGCCAAGGGAAGGAT...GTGTACTCTATACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTTGCTGGGGAAGCCTaGAGCCTTGATTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: VLCSVLLRVVVQSWGQVSFAGEA*SLDLSF
Trigger: GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAA...AGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCTTTGCTGGGGAAGCCTaGAGCCTTGATTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVFAGEA*SLDLSF
Trigger: GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAA...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCACATCACCTCTTCCAGTaGGTTCCCTCTTTTGACTCC +
Preference number: 5 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSHHLFQ*VPSFDS
Trigger: GGAGTCAAAAGAGGGAACCAACTGGAAGAGGTGATG...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CAA 90 bp ATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTGGCTTTGGGCTTTTCACCACCTCCATTaGTTCTCTCGAGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: IFAGEALSLDLSFPWLWAFHHLH*FSRASF
Trigger: GAAGGATGCTCGAGAGAACAAATGGAGGTGGTGAAA...AGCCCAAAGCCAAGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS TCA 90 bp GCACCAAGGAGATTACAGTGGGATTCAGGGTGTCTCAGGTCTCTCTaGGGGGCAAGAAAGAAGAGAATCATTTTGTCTACTCCCTTGCTT +
Preference number: 5 (lower is better)
Translates to: APRRLQWDSGCLRSL*GARKKRIILSTPLL
Trigger: AAGCAAGGGAGTAGACAAAATGATTCTCTTCTTTCTTGCCCCTCAGAGAGACCTGAGACACCCTGAATCCCACTGTAATCTCCTTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415854.5
CDS-3UTR CAA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGACTTTTGGACCTCACCTaGCGCATCGGCATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: FLVATCLHTELMGKISCRLLDLT*RIGMPS
Trigger: GGAAGGCATGCCGATGCGCAAGGTGAGGTCCAAAAG...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSIFVST*KPIAQP
Trigger: TGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTATGAGGCGCTTGGCCTaGGTTTCAGAGAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPMRRLA*VSEKDD
Trigger: ATCATCTTTCTCTGAAACCAAGGCCAAGCGCCTCAT...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCCCTTCCTTGATGAGGCGCTaGGCCTTGGTTTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: SLSLIFAGEALSLDLSFPSLMRR*ALVSEK
Trigger: TTTCTCTGAAACCAAGGCCAAGCGCCTCATCAAGGA...AGGGAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATCATTGCCAGCCTCCTaGATGAGGCGCTTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: FLVATCLHTELMGKISCRSLPAS*MRRLAL
Trigger: CAAGGCCAAGCGCCTCATCAAGGAGGCTGGCAATGA...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAAAGAGAGTCTGGGCTTaGAAAGGGCTGATGGGCTTC +
Preference number: 5 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPKRVWA*KGLMGF
Trigger: GAAGCCCATCAGCCCTTTCAAAGCCCAGACTCTCTT...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATAAGAGAGTCTGGGCTTaGAAAGGGCTGATGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNKRVWA*KGLMGF
Trigger: GAAGCCCATCAGCCCTTTCAAAGCCCAGACTCTCTT...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GAATGCACAATCCAAAGCTTGATTTTCACCACCTCCATTTGTTCTCTCGAGCATGACCCCTCTTTGGTCTaGTCCACTTTGGGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: ECTIQSLIFTTSICSLEHDPSLV*STLGSC
Trigger: GCAACTCCCCAAAGTGGACAAGACCAAAGAGGGGTC...ATGCTCGAGAGAACAAATGGAGGTGGTGAAAATCAAGCTTTGGATTGTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTAGATGTCGGTATGGGATTGAGCCTACAGCAAGAGGAAGAAGGGAACTCCAGTTCTCCTTTGAGAATTTaGAGACTGTGGTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VDVGMGLSLQQEEEGNSSSPLRI*RLWSRR
Trigger: CCTTCTGGACCACAGTCTCAAAATTCTCAAAGGAGA...ACTGGAGTTCCCTTCTTCCTCTTGCTGTAGGCTCAATCCCATACCGACATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CAA 90 bp TATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTGCTGTGAAGAATGAGGTAATTTaGTGCCTAGGAATGCACAAT +
Preference number: 5 (lower is better)
Translates to: YTSGAKEEAVQWGTLSAVKNEVI*CLGMHN
Trigger: ATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT...CACAGCACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS GCA 90 bp TGCTCCTCTTGGAGGAAATCCAAAAATTCCAGCAGAGTCAGCTTCTaGCCATCAGCTGAAAAACTTTCAAACAGTTCCTGCACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSSWRKSKNSSRVSF*PSAEKLSNSSCTSA
Trigger: TGCTGAGGTGCAGGAACTGTTTGAAAGTTTTTCAGCTGATGGGCAGAAGCTGACTCTGCTGGAATTTTTGGATTTCCTCCAAGAGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS-3UTR CAA 90 bp GAGAGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGAACTGAAGGCATATTCTaGGTCCATTTCCACATTCAT +
Preference number: 5 (lower is better)
Translates to: ERDVFIPVGLRRKQSSGGTEGIF*VHFHIH
Trigger: ATGAATGTGGAAATGGACCAAGAATATGCCTTCAGT...TCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTGTAGTGGTTCAGGGGTaGAGTCATATCCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: CSVLLRVVVQSWGQVSFPVVVQG*SHILID
Trigger: ATCTATCAGGATATGACTCAACCCCTGAACCACTAC...AGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAGTAGTGGTTCAGGGGTaGAGTCATATCCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLVVVQG*SHILID
Trigger: ATCTATCAGGATATGACTCAACCCCTGAACCACTAC...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GGGGTCAAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTAGGACACAAGATGGGCTaGGATTTCTTCTTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GVKSLSLIFAGEALSLDLGHKMG*DFFFLS
Trigger: GGACAAAAAGAAGAAATCCAAGCCCATCTTGTGTCC...TAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTTGACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417849.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AAGTCTCTTTCCCTAATCTTTGCTGGGGAAGCCTTGAGCCTTGATTTATCCTTCTCCTTGATGAGGCGCTaGGCCTTGGTTTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: KSLSLIFAGEALSLDLSFSLMRR*ALVSEK
Trigger: TTTCTCTGAAACCAAGGCCAAGCGCCTCATCAAGGA...GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAAGATTAGGGAAAGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTTCCTTGATGAGGCGCTaGGCCTTGGTTTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLSLMRR*ALVSEK
Trigger: TTTCTCTGAAACCAAGGCCAAGCGCCTCATCAAGGA...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTCCAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACACTTAACTGCCAAGTATaGTGCTGCACAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: VQWGTLSAVQCSLKSRSTLNCQV*CCTNSL
Trigger: CAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAG...TGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTTAACTGCCAAGTATaGTGCTGCACAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVLNCQV*CCTNSL
Trigger: CAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAG...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TGGCGGAAATGCCCATCACAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCCTTAACTGCCAAGTATaGTGCTGCACAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: WRKCPSQMSISSPAVCIFLNCQV*CCTNSL
Trigger: CAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAG...GAATATGCAGACTGCAGGGCTTGAAATGGACATCTGTGATGGGCATTTCCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS-3UTR CAA 90 bp GTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATGTCGGTTTGCTGGGGAAGCCTaGAGCCTTGATTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: VATCLHTELMGKISCRCRFAGEA*SLDLSF
Trigger: GAAGGATAAATCAAGGCTCAAGGCTTCCCCAGCAAA...CCGACATCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTAGTTGGTTCCCTCTTTaGACTCCACTAATTCGCAAT +
Preference number: 5 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLSWFPL*TPLIRN
Trigger: ATTGCGAATTAGTGGAGTCAAAAGAGGGAACCAACT...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS-3UTR CAA 90 bp CAGTGGGGGACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCAAATCAGGTCCCAGATaGCTTGTTAGGAAGAATGAG +
Preference number: 5 (lower is better)
Translates to: QWGTLSAVQCSLKSRSTVKSGPR*LVRKNE
Trigger: CTCATTCTTCCTAACAAGCAATCTGGGACCTGATTT...GACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGTCCCCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp CAGATGTCCATTTCAAGCCCTGCAGTCTGCATATTCATGGCCACCATCTGGCAGTGCTGCACAAACTCATaGCCTTCTTTTTGTCCTTAT +
Preference number: 5 (lower is better)
Translates to: QMSISSPAVCIFMATIWQCCTNS*PSFCPY
Trigger: ATAAGGACAAAAAGAAGGCAATGAGTTTGTGCAGCA...CTGCCAGATGGTGGCCATGAATATGCAGACTGCAGGGCTTGAAATGGACATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS TCA 90 bp TTCCAGTTGGTTCCCTCTTTTGACTCCACTAATTCGCAATGGCTCTaGGTCTCATCTCCTTTGAGAATTTTGAGACTGTGGTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: FQLVPSFDSTNSQWL*VSSPLRILRLWSRR
Trigger: CCTTCTGGACCACAGTCTCAAAATTCTCAAAGGAGATGAGACTCAGAGCCATTGCGAATTAGTGGAGTCAAAAGAGGGAACCAACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS CCA 90 bp GGTCCTCAATTTCTAAGAGACTTCATGTCACCTAGAGATGGACTTTaGCAGAGTTACCAATGGCACCAAGGAGATTACAGTGGGATTCAG +
Preference number: 5 (lower is better)
Translates to: GPQFLRDFMSPRDGL*QSYQWHQGDYSGIQ
Trigger: CTGAATCCCACTGTAATCTCCTTGGTGCCATTGGTAACTCTGCCAAAGTCCATCTCTAGGTGACATGAAGTCTCTTAGAAATTGAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415854.5
CDS-3UTR CAA 90 bp TGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTTGAGTACTGAAGGCATATTCTaGGTCCATTTCCACATTCAT +
Preference number: 5 (lower is better)
Translates to: CIYTSGAKEEAVQWGTLSTEGIF*VHFHIH
Trigger: ATGAATGTGGAAATGGACCAAGAATATGCCTTCAGT...ACTCAAAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAATGAGGCGCTTGGCCTaGGTTTCAGAGAAAGATGAT +
Preference number: 5 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPMRRLA*VSEKDD
Trigger: ATCATCTTTCTCTGAAACCAAGGCCAAGCGCCTCAT...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCACTTAACTGCCAAGTATaGTGCTGCACAAACTCATTG +
Preference number: 5 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSLNCQV*CCTNSL
Trigger: CAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAG...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp ACTTTGAGTGCTGTGCAGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCATGCCTTCACACAGAGTaGATGGGAAAGATTAGTTGT +
Preference number: 5 (lower is better)
Translates to: TLSAVQCSLKSRSTVLGSCLHTE*MGKISC
Trigger: ACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCA...TGACCCCAGGACTGTACTACGACTCTTAAGAGAACACTGCACAGCACTCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS TCA 90 bp GAGGAAATCCAAAAATTCCAGCAGAGTCAGCTTCTGCCCATCAGCTaGAAAACTTTCAAACAGTTCCTGCACCTCAGCACGTTTAGTCAA +
Preference number: 5 (lower is better)
Translates to: EEIQKFQQSQLLPIS*KTFKQFLHLSTFSQ
Trigger: TTGACTAAACGTGCTGAGGTGCAGGAACTGTTTGAAAGTTTTTCAGCTGATGGGCAGAAGCTGACTCTGCTGGAATTTTTGGATTTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS-3UTR CAA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNIFVST*KPIAQP
Trigger: TGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TTTGAGGAAGTTGGGGATGGAGGGGATGATGCTTCTTTAGGTTTCTCTATTCCAATTTTTGTCTCCACGTaGAAACCAATCGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: FEEVGDGGDDASLGFSIPIFVST*KPIAQP
Trigger: TGGCTGAGCGATTGGTTTCAACGTGGAGACAAAAAT...TGGAATAGAGAAACCTAAAGAAGCATCATCCCCTCCATCCCCAACTTCCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp GTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATCTTGTAGTGGTTCAGGGGTaGAGTCATATCCTGATAGAT +
Preference number: 5 (lower is better)
Translates to: VLLRVVVQSWGQVSFPNLVVVQG*SHILID
Trigger: ATCTATCAGGATATGACTCAACCCCTGAACCACTAC...AAGATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AGAGATGTATTTATACCAGTGGGGCTAAGGAGGAAGCAGTCCAGTGGGGGACTTAAGAATGAGGTAATTTaGTGCCTAGGAATGCACAAT +
Preference number: 5 (lower is better)
Translates to: RDVFIPVGLRRKQSSGGLKNEVI*CLGMHN
Trigger: ATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT...AAGTCCCCCACTGGACTGCTTCCTCCTTAGCCCCACTGGTATAAATACATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGATTTCACCACCTCCATTaGTTCTCTCGAGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: FLVATCLHTELMGKISCRFHHLH*FSRASF
Trigger: GAAGGATGCTCGAGAGAACAAATGGAGGTGGTGAAA...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AGTGTTCTCTTAAGAGTCGTAGTACAGTCCTGGGGTCAAGTCTCTTTCCCTAATTGCCTTCACACAGAGTaGATGGGAAAGATTAGTTGT +
Preference number: 5 (lower is better)
Translates to: SVLLRVVVQSWGQVSFPNCLHTE*MGKISC
Trigger: ACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCA...ATTAGGGAAAGAGACTTGACCCCAGGACTGTACTACGACTCTTAAGAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
CDS-3UTR CAA 90 bp TTTCTAGTTGCAACCTGCCTTCACACAGAGTTGATGGGAAAGATTAGTTGTAGAAAATCAGGTCCCAGATaGCTTGTTAGGAAGAATGAG +
Preference number: 5 (lower is better)
Translates to: FLVATCLHTELMGKISCRKSGPR*LVRKNE
Trigger: CTCATTCTTCCTAACAAGCAATCTGGGACCTGATTT...TCTACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCAGGTTGCAACTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS-3UTR CAA 90 bp AAGAATGAGGTAATTTTGTGCCTAGGAATGCACAATCCAAAGCTTGATTTTCACTGCCTTCACACAGAGTaGATGGGAAAGATTAGTTGT +
Preference number: 5 (lower is better)
Translates to: KNEVILCLGMHNPKLDFHCLHTE*MGKISC
Trigger: ACAACTAATCTTTCCCATCAACTCTGTGTGAAGGCA...GTGAAAATCAAGCTTTGGATTGTGCATTCCTAGGCACAAAATTACCTCATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432688.5
ENST00000450993.7
CDS GCA 72 bp TTGGAGCGGCGGCCATGGAAGACAATGGTGAAGCCCTaGTCCAGGGGGAGCTCCTCTGCCAGGCTACGCAGC +
Preference number: 6 (lower is better)
Translates to: LERRPWKTMVKP*SRGSSSARLRS
Trigger: GCTGCGTAGCCTGGCAGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGTCTTCCATGGCCGCCGCTCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000444453.5
ENST00000446503.5
ENST00000450993.7
ENST00000465713.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS GCA 72 bp AGGGCAGCTGAGTGGGCAGCACCCCATCCAAGGTGGTaGTCAGCAGCTGCTCCCCCAGGATCTCAGTCAGAT +
Preference number: 6 (lower is better)
Translates to: RAAEWAAPHPRW*SAAAPPGSQSD
Trigger: ATCTGACTGAGATCCTGGGGGAGCAGCTGCTGAGCACCACCTTGGATGGGGTGCTGCCCACTCAGCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000458239.1
ENST00000459791.5
ENST00000473443.5
CDS TCA 72 bp CGCATCGGCATGCCTTCCTGCATCAGCAGCAAGTCCTaGTCAGTGGTCAGCTGGTCTTGCAGCAGGGACGCC +
Preference number: 6 (lower is better)
Translates to: RIGMPSCISSKS*SVVSWSCSRDA
Trigger: GGCGTCCCTGCTGCAAGACCAGCTGACCACTGATCAGGACTTGCTGCTGATGCAGGAAGGCATGCCGATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000444453.5
ENST00000446503.5
ENST00000450993.7
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS TCA 72 bp TCTCCCCGTCTAAAGCCAGCACACCAACCCTTCCCGTaGAATGCCCACCTCAGGACTCATCCCCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: SPRLKPAHQPFP*NAHLRTHPPPG
Trigger: GCCTGGAGGGGGATGAGTCCTGAGGTGGGCATTTCACGGGAAGGGTTGGTGTGCTGGCTTTAGACGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS GCA 72 bp CCGTCTAAAGCCAGCACACCAACCCTTCCCGTGAAATaGCCACCTCAGGACTCATCCCCCTCCAGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: PSKASTPTLPVK*PPQDSSPSRPS
Trigger: GGAAGGCCTGGAGGGGGATGAGTCCTGAGGTGGGCATTTCACGGGAAGGGTTGGTGTGCTGGCTTTAGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS TCA 72 bp GATACTGGTCCAGGCGCTCCTGATGGTCCATGCTGGTaGCAAGATCCACCAACAGCTGGAGCCCTCGCATCC +
Preference number: 6 (lower is better)
Translates to: DTGPGAPDGPCW*QDPPTAGALAS
Trigger: GGATGCGAGGGCTCCAGCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAGTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473443.5
CDS GCA 72 bp TCTCCACATCAGAGATTGAGAAGCTGGGCTTGGCACTaGCCCTGGCCTGCCGTGCATGCCAGACTGTCATGC +
Preference number: 6 (lower is better)
Translates to: SPHQRLRSWAWH*PWPAVHARLSC
Trigger: GCATGACAGTCTGGCATGCACGGCAGGCCAGGGGCAGTGCCAAGCCCAGCTTCTCAATCTCTGATGTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS GCA 72 bp GACAATGGTGAAGCCCTGCTCCAGGGGGAGCTCCTCTaGCAGGCTACGCAGCAACTCGGAATCATGGCCATT +
Preference number: 6 (lower is better)
Translates to: DNGEALLQGELL*QATQQLGIMAI
Trigger: AATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGGAGCTCCCCCTGGAGCAGGGCTTCACCATTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000444453.5
ENST00000446503.5
ENST00000450993.7
ENST00000465713.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS CCA 72 bp CATCAGAGATTGAGAAGCTGGGCTTGGCACTGCCCCTaGCCTGCCGTGCATGCCAGACTGTCATGCCGTCAT +
Preference number: 6 (lower is better)
Translates to: HQRLRSWAWHCP*PAVHARLSCRH
Trigger: ATGACGGCATGACAGTCTGGCATGCACGGCAGGCCAGGGGCAGTGCCAAGCCCAGCTTCTCAATCTCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS TCA 72 bp CTGACTCCATCCTGCCGATACTGGTCCAGGCGCTCCTaGTGGTCCATGCTGGTGACAAGATCCACCAACAGC +
Preference number: 6 (lower is better)
Translates to: LTPSCRYWSRRS*WSMLVTRSTNS
Trigger: GCTGTTGGTGGATCTTGTCACCAGCATGGACCATCAGGAGCGCCTGGACCAGTATCGGCAGGATGGAGTCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473443.5
CDS GCA 72 bp CTCTACCACCACTGCACCGTATATATCCCTCGACGCTaGTCTGGCCACAAAGCTGGTCCCCCACTAGGTAGG +
Preference number: 6 (lower is better)
Translates to: LYHHCTVYIPRR*SGHKAGPPLGR
Trigger: CCTACCTAGTGGGGGACCAGCTTTGTGGCCAGAGCAGCGTCGAGGGATATATACGGTGCAGTGGTGGTAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459791.5
ENST00000469493.5
CDS CCA 72 bp AGATCCACCAACAGCTGGAGCCCTCGCATCCATATCTaGGCCTCCTCAACACTGTTGGCCATCAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RSTNSWSPRIHI*ASSTLLAIRSR
Trigger: CCTGGACCTGATGGCCAACAGTGTTGAGGAGGCCCAGATATGGATGCGAGGGCTCCAGCTGTTGGTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000444453.5
ENST00000446503.5
ENST00000450993.7
ENST00000465713.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS CAA 72 bp GTATTGGCCAGGGGCCAAAGGGGCTGGCTCACCTTGTaGCATGCAGGTCCAAGGCAGGGTGTACTGACCAAT +
Preference number: 6 (lower is better)
Translates to: VLARGQRGWLTL*HAGPRQGVLTN
Trigger: ATTGGTCAGTACACCCTGCCTTGGACCTGCATGCAACAAGGTGAGCCAGCCCCTTTGGCCCCTGGCCAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459791.5
CDS TCA 72 bp GGAAGGCATACTGTGCTACTGTGGCCACGACATCTTTaGACAGGATGCGGGAGGTCAGGGTGTGTCCGTGGT +
Preference number: 6 (lower is better)
Translates to: GRHTVLLWPRHL*TGCGRSGCVRG
Trigger: ACCACGGACACACCCTGACCTCCCGCATCCTGTTCAAAGATGTCGTGGCCACAGTAGCACAGTATGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000473443.5
ENST00000497482.1
CDS CAA 90 bp CCTCTGCCAGGCTACGCAGCAACTCGGAATCATGGCCATTACGTATaGTCTCCACATCAGAGATTGAGAAGCTGGGCTTGGCACTGCCCC +
Preference number: 6 (lower is better)
Translates to: PLPGYAATRNHGHYV*SPHQRLRSWAWHCP
Trigger: GGGGCAGTGCCAAGCCCAGCTTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS TCA 72 bp TTCTCCATCCATGGGGACACTGCTGCAAGCTCACGCTaGTCTCTACCCATACTTCAGCCCACCCGACTCACA +
Preference number: 6 (lower is better)
Translates to: FSIHGDTAASSR*SLPILQPTRLT
Trigger: TGTGAGTCGGGTGGGCTGAAGTATGGGTAGAGATCAGCGTGAGCTTGCAGCAGTGTCCCCATGGATGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459791.5
CDS CAA 90 bp TCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTGCCAAGTATaGTGCTGCACAAACTCATTGCCAGCCTCCTTGATGAGGCGCTTG +
Preference number: 6 (lower is better)
Translates to: SVLRPLGYTRLNCQV*CCTNSLPASLMRRL
Trigger: CAAGCGCCTCATCAAGGAGGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS CAA 90 bp CCTCTGCCAGGCTACGCAGCAACTCGGAATCATGGCCATTACGTATaGTCTCCACATCAGAGATTGAGAGGTCTTGCAGCAGGGACGCCA +
Preference number: 6 (lower is better)
Translates to: PLPGYAATRNHGHYV*SPHQRLRGLAAGTP
Trigger: TGGCGTCCCTGCTGCAAGACCTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465713.5
CDS TCA 72 bp GACTCAGGCTTGGAAATAGGAGCCTGGGCCACAATCTaGCAACAGATAGACGGACAAAACAGCGGGCACGTC +
Preference number: 6 (lower is better)
Translates to: DSGLEIGAWATI*QQIDGQNSGHV
Trigger: GACGTGCCCGCTGTTTTGTCCGTCTATCTGTTGTCAGATTGTGGCCCAGGCTCCTATTTCCAAGCCTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS TCA 72 bp TGTCCATCCAGACCAGCTTTCCTGCCCCTAGACCCTTaGGCCACTATTCATAACTCCTCTGCCCTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: CPSRPAFLPLDP*ATIHNSSALVC
Trigger: GCAGACAAGGGCAGAGGAGTTATGAATAGTGGCTCAAGGGTCTAGGGGCAGGAAAGCTGGTCTGGATGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS GCA 72 bp TCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SVLRPLGYTRLN*QVLCCTNSLPA
Trigger: GGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS GCA 72 bp CAGCACTTACCCATCCAGACCCCTTCAAGCTACATCTaGATAGAGCCTTCTCCATCCATGGGGACACTGCTG +
Preference number: 6 (lower is better)
Translates to: QHLPIQTPSSYI*IEPSPSMGTLL
Trigger: CAGCAGTGTCCCCATGGATGGAGAAGGCTCTATGCAGATGTAGCTTGAAGGGGTCTGGATGGGTAAGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459791.5
CDS GCA 72 bp TCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: SVLRPLGYTRLN*QVLCCTNSLPA
Trigger: GGCAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484718.1
CDS GCA 72 bp CAGGATCTTCCTCCGAAGCTCCTGGAAGGCATACTGTaGTACTGTGGCCACGACATCTTTGAACAGGATGCG +
Preference number: 6 (lower is better)
Translates to: QDLPPKLLEGIL*YCGHDIFEQDA
Trigger: CGCATCCTGTTCAAAGATGTCGTGGCCACAGTAGCACAGTATGCCTTCCAGGAGCTTCGGAGGAAGATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497482.1
CDS CCA 72 bp GGGGGTTGTAGTTGGAAGAGTCTGTCCTCAGGCCGCTaGGATACACACGGCTTAACTGCCAAGTATTGTGCT +
Preference number: 6 (lower is better)
Translates to: GGCSWKSLSSGR*DTHGLTAKYCA
Trigger: AGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGACTCTTCCAACTACAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000458239.1
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
ENST00000484718.1
CDS CAA 90 bp CCTCTGCCAGGCTACGCAGCAACTCGGAATCATGGCCATTACGTATaGTCTCCACATCAGAGATTGAGACTTGCGCATCGGCATGCCTTC +
Preference number: 6 (lower is better)
Translates to: PLPGYAATRNHGHYV*SPHQRLRLAHRHAF
Trigger: GAAGGCATGCCGATGCGCAAGTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444453.5
ENST00000446503.5
ENST00000473443.5
CDS TCA 72 bp TTGTTTCCTCCCCTCTTCTACAGCAGCTGGCTGCTGTaGCTGGCAAGTTATAGCCGGAGGGAAGCAGTAAGA +
Preference number: 6 (lower is better)
Translates to: LFPPLFYSSWLL*LASYSRREAVR
Trigger: TCTTACTGCTTCCCTCCGGCTATAACTTGCCAGTCACAGCAGCCAGCTGCTGTAGAAGAGGGGAGGAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483685.5
CDS TCA 72 bp CCGAAGCTCCACTGTCTGAAGGTTCATAGCGGTCAATaGGTTCCAGAGCAAGCTCAGAGGTGCAGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: PKLHCLKVHSGQ*VPEQAQRCSLS
Trigger: AGAGAGACTGCACCTCTGAGCTTGCTCTGGAACTCATTGACCGCTATGAACCTTCAGACAGTGGAGCTTCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483685.5
CDS GCA 72 bp CTGGGATACACACGGCTTAACTGCCAAGTATTGTGCTaGACAAACTCATTGCCAGCCTCCTTGATGAGGCGC +
Preference number: 6 (lower is better)
Translates to: LGYTRLNCQVLC*TNSLPASLMRR
Trigger: GCGCCTCATCAAGGAGGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS GCA 72 bp CTGGGATACACACGGCTTAACTGCCAAGTATTGTGCTaGACAAACTCATTGCCTGCCAGTCCATCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: LGYTRLNCQVLC*TNSLPASPSGL
Trigger: CAGGCCTGATGGACTGGCAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484718.1
CDS CAA 72 bp AGGCCGCTGGGATACACACGGCTTAACTGCCAAGTATaGTGCTGCACAAACTCATTGCCAGCCTCCTTGATG +
Preference number: 6 (lower is better)
Translates to: RPLGYTRLNCQV*CCTNSLPASLM
Trigger: CATCAAGGAGGCTGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
CDS CAA 72 bp AGGCCGCTGGGATACACACGGCTTAACTGCCAAGTATaGTGCTGCACAAACTCATTGCCTGCCAGTCCATCA +
Preference number: 6 (lower is better)
Translates to: RPLGYTRLNCQV*CCTNSLPASPS
Trigger: TGATGGACTGGCAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484718.1
CDS CAA 90 bp ATCTCCTTTGAGAATTTTGAGACTGTGGTCCAGAAGGGAGGACACTaGGGTTCAGAACTCAGTAGCATGCGTGTCCCTCTGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: ISFENFETVVQKGGH*GSELSSMRVPLLSL
Trigger: GAGGCTGAGCAGAGGGACACGCATGCTACTGAGTTCTGAACCCAAGTGTCCTCCCTTCTGGACCACAGTCTCAAAATTCTCAAAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS TCA 72 bp GCAGTTTGCCACTGTCTGAAGGTTCATAGCGGTCAATaGGTTCCAGAGCAAGCTCAGAGGTGCAGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: AVCHCLKVHSGQ*VPEQAQRCSLS
Trigger: AGAGAGACTGCACCTCTGAGCTTGCTCTGGAACTCATTGACCGCTATGAACCTTCAGACAGTGGCAAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000469493.5
ENST00000473443.5
CDS GCA 72 bp TCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: SVLRPLGYTRLN*QVLCCTNSLPS
Trigger: AGAAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS GCA 72 bp TCTGTCCTCAGGCCGCTGGGATACACACGGCTTAACTaGCAAGTATTGTGCTGCACAAACTCATTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: SVLRPLGYTRLN*QVLCCTNSLPV
Trigger: TACAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCTGAGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS CCA 72 bp AGCTCCTCTGCCAGGCTACGCAGCAACTCGGAATCATaGCCATTACGTATTGTCTCCACATCAGAGATTGAG +
Preference number: 6 (lower is better)
Translates to: SSSARLRSNSES*PLRIVSTSEIE
Trigger: CTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCCTGGCAGAGGAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000444453.5
ENST00000446503.5
ENST00000450993.7
ENST00000465713.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS CCA 72 bp AGAATTTTGAGACTGTGGTCCAGAAGGGAGGACACTTaGGTTCAGAACTCAGTAGCATGCGTGTCCCTCTGC +
Preference number: 6 (lower is better)
Translates to: RILRLWSRREDT*VQNSVACVSLC
Trigger: GCAGAGGGACACGCATGCTACTGAGTTCTGAACCCAAGTGTCCTCCCTTCTGGACCACAGTCTCAAAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS CCA 72 bp GACAGACTTCAAGTAGATAACCAGGGAAGAGAGGGCTaGACACAAGATGGGCTTGGATTTCTGCCGGGACAA +
Preference number: 6 (lower is better)
Translates to: DRLQVDNQGREG*TQDGLGFLPGQ
Trigger: TTGTCCCGGCAGAAATCCAAGCCCATCTTGTGTCCAGCCCTCTCTTCCCTGGTTATCTACTTGAAGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS CAA 72 bp AAGTATCTTAGCTTCTTCCAGCTTTTGGACCTCACCTaGCGCATCGGCATGCCTTCCTGCATCAGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: KYLSFFQLLDLT*RIGMPSCISSK
Trigger: CTTGCTGCTGATGCAGGAAGGCATGCCGATGCGCAAGGTGAGGTCCAAAAGCTGGAAGAAGCTAAGATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS CAA 72 bp GGCTACGCAGCAACTCGGAATCATGGCCATTACGTATaGTCTCCACATCAGAGATTGAGACTTGCGCATCGG +
Preference number: 6 (lower is better)
Translates to: GYAATRNHGHYV*SPHQRLRLAHR
Trigger: CCGATGCGCAAGTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444453.5
ENST00000446503.5
ENST00000473443.5
CDS TCA 72 bp GCCTGCCGTGCATGCCAGACTGTCATGCCGTCATTCTaGAGTCTGAAGTATCTTAGCTTCTTCCAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: ACRACQTVMPSF*SLKYLSFFQLL
Trigger: CAAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGAATGACGGCATGACAGTCTGGCATGCACGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS GCA 72 bp GCAAGTTCAGGCACCAGCACCCGGAAACATAGTGTCTaGCCCCAGTATGGATTAAAACCATTGTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: ASSGTSTRKHSV*PQYGLKPLFST
Trigger: TGTGGAGAACAATGGTTTTAATCCATACTGGGGGCAGACACTATGTTTCCGGGTGCTGGTGCCTGAACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000457773.1
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
ENST00000484718.1
CDS CAA 72 bp GGCTACGCAGCAACTCGGAATCATGGCCATTACGTATaGTCTCCACATCAGAGATTGAGAGGTCTTGCAGCA +
Preference number: 6 (lower is better)
Translates to: GYAATRNHGHYV*SPHQRLRGLAA
Trigger: TGCTGCAAGACCTCTCAATCTCTGATGTGGAGACAATACGTAATGGCCATGATTCCGAGTTGCTGCGTAGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465713.5
CDS CAA 72 bp AGGCCGCTGGGATACACACGGCTTAACTGCCAAGTATaGTGCTGCACAAACTCATTGCCTTCTTTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: RPLGYTRLNCQV*CCTNSLPSFCP
Trigger: AGGACAAAAAGAAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458239.1
CDS CAA 72 bp AGGCCGCTGGGATACACACGGCTTAACTGCCAAGTATaGTGCTGCACAAACTCATTGCCTGTAAAAGGGTAT +
Preference number: 6 (lower is better)
Translates to: RPLGYTRLNCQV*CCTNSLPVKGY
Trigger: ATACCCTTTTACAGGCAATGAGTTTGTGCAGCACAATACTTGGCAGTTAAGCCGTGTGTATCCCAGCGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459791.5
ENST00000473443.5
ENST00000483685.5
CDS TCA 72 bp GTGCATGCCAGACTGTCATGCCGTCATTCTGAAGTCTaGAGTATCTTAGCTTCTTCCAGCTTTTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: VHARLSCRHSEV*SILASSSFWTS
Trigger: TGAGGTCCAAAAGCTGGAAGAAGCTAAGATACTTCAGACTTCAGAATGACGGCATGACAGTCTGGCATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000415854.5
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000469493.5
ENST00000483685.5
CDS TCA 72 bp GCACTGTTACCATCCCTGTTTCACAGATGGGGAGACTaGGGTATAGAAGTTAAATACTTAGCCCCAGAGTAC +
Preference number: 6 (lower is better)
Translates to: ALLPSLFHRWGD*GIEVKYLAPEY
Trigger: GTACTCTGGGGCTAAGTATTTAACTTCTATACCTCAGTCTCCCCATCTGTGAAACAGGGATGGTAACAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459791.5
ENST00000469493.5
CDS CCA 72 bp GACAGACTTCAAGTAGATAACCAGGGAAGAGAGGGCTaGACACAAGATGGGCTTGGATTTCTTCTTTTTGTC +
Preference number: 6 (lower is better)
Translates to: DRLQVDNQGREG*TQDGLGFLLFV
Trigger: GACAAAAAGAAGAAATCCAAGCCCATCTTGTGTCCAGCCCTCTCTTCCCTGGTTATCTACTTGAAGTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417849.5
ENST00000450993.7
ENST00000459791.5
ENST00000465713.5
ENST00000473443.5
ENST00000483685.5
ENST00000497482.1
CDS CAA 72 bp CCGACTCACAGTCCTTCCATAGCAATCCATCACACATaGCCTCATGATGCATCTGGTGTTCTGGTTTTACTT +
Preference number: 6 (lower is better)
Translates to: PTHSPSIAIHHT*PHDASGVLVLL
Trigger: AAGTAAAACCAGAACACCAGATGCATCATGAGGCAATGTGTGATGGATTGCTATGGAAGGACTGTGAGTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459791.5
CDS TCA 72 bp GTTCCCTCTTTTGACTCCACTAATTCGCAATGGCTCTaGGTCTCATCTCCTTTGAGAATTTTGAGACTGTGG +
Preference number: 6 (lower is better)
Translates to: VPSFDSTNSQWL*VSSPLRILRLW
Trigger: CCACAGTCTCAAAATTCTCAAAGGAGATGAGACTCAGAGCCATTGCGAATTAGTGGAGTCAAAAGAGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432688.5
CDS CAA 72 bp CAGGAGAGTTTCATAGCTTGTGAAAGAGAAGTTCCATaGACCCATAGGGTTTCATTACCATTCTCCCACCAG +
Preference number: 6 (lower is better)
Translates to: QESFIACEREVP*THRVSLPFSHQ
Trigger: CTGGTGGGAGAATGGTAATGAAACCCTATGGGTCAATGGAACTTCTCTTTCACAAGCTATGAAACTCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459791.5
ENST00000469493.5
CDS GCA 72 bp TTCAAACAGTTCCTGCACCTCAGCACGTTTAGTCAATaGCTTATAGAACTGTACGAATTCTTCTCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: FKQFLHLSTFSQ*LIELYEFFSFQ
Trigger: CTGGAAGGAGAAGAATTCGTACAGTTCTATAAGGCATTGACTAAACGTGCTGAGGTGCAGGAACTGTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417849.5
ENST00000432688.5
ENST00000450993.7
ENST00000459791.5
ENST00000469493.5
ENST00000473443.5
ENST00000483685.5
CDS CCA 72 bp TTTCTAAGAGACTTCATGTCACCTAGAGATGGACTTTaGCAGAGTTACCAATGGCACCAAGGAGATTACAGT +
Preference number: 6 (lower is better)
Translates to: FLRDFMSPRDGL*QSYQWHQGDYS
Trigger: ACTGTAATCTCCTTGGTGCCATTGGTAACTCTGCCAAAGTCCATCTCTAGGTGACATGAAGTCTCTTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415854.5
CDS CAA 90 bp TCTGAGTTCCAGGAGAGTTTCATAGCTTGTGAAAGAGAAGTTCCATaGACCCATAGGGTTTCATTACCATTCTCCCACCAGTCTTCAATA +
Preference number: 6 (lower is better)
Translates to: SEFQESFIACEREVP*THRVSLPFSHQSSI
Trigger: TATTGAAGACTGGTGGGAGAATGGTAATGAAACCCTATGGGTCAATGGAACTTCTCTTTCACAAGCTATGAAACTCTCCTGGAACTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459791.5
ENST00000469493.5
CDS CCA 72 bp ATTTACACCTTAATTCCTCAGCTAGACTTCCTAAGGTaGAAACTATATGTTCCACTCATCTTTGTATCCCTT +
Preference number: 6 (lower is better)
Translates to: IYTLIPQLDFLR*KLYVPLIFVSL
Trigger: AAGGGATACAAAGATGAGTGGAACATATAGTTTCCACCTTAGGAAGTCTAGCTGAGGAATTAAGGTGTAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459791.5
ENST00000469493.5