RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187091

Ensembl transcript IDs: ENST00000334661.5, ENST00000417185.6, ENST00000461445.5, ENST00000463876.5, ENST00000473834.1, ENST00000479619.1, ENST00000484829.5, ENST00000495367.1, ENST00000495395.1

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTaGGCTAGCTCCTGGTCCCCAGGGAGGCAGCAGCAGACACTATGT +
Preference number: 1 (lower is better)
Translates to: GCSVIPNGMKDSSRD*ASSWSPGRQQQTLC
Trigger: ACATAGTGTCTGCTGCTGCCTCCCTGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
3UTR-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGGGCTGAAGGCAATTTaGGGGCCTAGCTCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAGLKAI*GPSSEQ
Trigger: TTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
3UTR GCA 72 bp TCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTaGAGTGTTATTCCTAACGGAATGAAGGACAGCTCC +
Preference number: 3 (lower is better)
Translates to: SLTTRWPEGGEG*SVIPNGMKDSS
Trigger: GGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
3UTR TCA 72 bp AGGGTGGAGAGGGCTGCAGTGTTATTCCTAACGGAATaGAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGT +
Preference number: 3 (lower is better)
Translates to: RVERAAVLFLTE*RTAPGTGLAPG
Trigger: ACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGCCCACCAGGGCCCCTaGGCCAGGGCGCGGGGGTTA +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPAHQGP*ARARGL
Trigger: TAACCCCCGCGCCCTGGCTCAGGGGCCCTGGTGGGC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCCCACCAGGGCCCCTaGGCCAGGGCGCGGGGGTTA +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWAHQGP*ARARGL
Trigger: TAACCCCCGCGCCCTGGCTCAGGGGCCCTGGTGGGC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAACAGCACCGGCGGCCTaGGGTCCGAGCGGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPTAPAA*GPSGVR
Trigger: CCGCACTCCGCTCGGACCCCAGGCCGCCGGTGCTGT...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334661.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGGCGGTGTGCCAGGCTaGAGGCGCTGCCGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAGGVPG*RRCRQP
Trigger: CGGCTGACGGCAGCGCCTTCAGCCTGGCACACCGCC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCGACAGAGTCTCCCCTaGGCCCGCGGCCTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWRQSLP*ARGLGE
Trigger: TTCGCCGAGGCCGCGGGCTCAGGGGAGACTCTGTCG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACGGCCTCGGCGAAGGTaGGGTCGATCTCCACCCGCT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPRPRRR*GRSPPA
Trigger: AGCGGGTGGAGATCGACCGCACCTTCGCCGAGGCCG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGCCGCCTCCTCCCGCTaGTGGTGCTGCAGGAACGTC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPAASSR*WCCRNV
Trigger: GACGTTCCTGCAGCACCAGCAGCGGGAGGAGGCGGC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGTTGAGCCGCTTCCGTaGCCACCAGGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPVEPLP*PPGPLS
Trigger: GCTCAGGGGCCCTGGTGGGCACGGAAGCGGCTCAAC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCATGGCCCTCCACAGTaGCCCTGCCTGCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWHGPPQ*PCLRGA
Trigger: GGCTCCGCGCAGGCAGGGGCACTGTGGAGGGCCATG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCAGCAGTCTGGCGGCTaGCCACGTCCCGGCTCACGC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWQQSGG*PRPGSR
Trigger: GCGTGAGCCGGGACGTGGCCAGCCGCCAGACTGCTG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCAGCAGTCTGGCGGCTaGCCACGTCCCGGCTCACGC +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGQQSGG*PRPGSR
Trigger: GCGTGAGCCGGGACGTGGCCAGCCGCCAGACTGCTG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAACCGCGGGACTCACTTaGGTAGCGACAGCACCGGCG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPTAGLT*VATAPA
Trigger: CGCCGGTGCTGTCGCTACTCAAGTGAGTCCCGCGGT...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334661.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGCTCGTAGCGCTCAATaGGGGAGAGGGCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPARSAQ*GRGPAQ
Trigger: CTGCGCTGGCCCTCTCCCTCATTGAGCGCTACGAGC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGGCGGTGTGCCAGGCTaGAGGCGCTGCCGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLGGVPG*RRCRQP
Trigger: CGGCTGACGGCAGCGCCTTCAGCCTGGCACACCGCC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCGGCCTCGGCGAAGGTaGGGTCGATCTCCACCCGCT +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWRPRRR*GRSPPA
Trigger: AGCGGGTGGAGATCGACCGCACCTTCGCCGAGGCCG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCCGCCTCCTCCCGCTaGTGGTGCTGCAGGAACGTC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWAASSR*WCCRNV
Trigger: GACGTTCCTGCAGCACCAGCAGCGGGAGGAGGCGGC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGTAGACACGGCGGTGTaGCAGGCTGAAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPVDTAV*QAEGAA
Trigger: GGCAGCGCCTTCAGCCTGGCACACCGCCGTGTCTAC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACGCGCCATCACGCGCTaGTGCTCCAGTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPRAITR*CSSVQW
Trigger: CCACTGCACACTGGAGCAGCAGCGCGTGATGGCGCG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGGGCCCAGGATGGCATaGAGGTGCCGCGCCATCACG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWGPRMA*RCRAIT
Trigger: CGTGATGGCGCGGCACCTGCATGCCATCCTGGGCCC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCATGGGGCCCAGGATaGCATGCAGGTGCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWAWGPG*HAGAAP
Trigger: TGGCGCGGCACCTGCATGCCATCCTGGGCCCCATGC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCCTTGACCACTCGCTaGCCGGAGGGTGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSLTTR*PEGGEG
Trigger: GCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGCTCGTAGCGCTCAATaGGGGAGAGGGCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAARSAQ*GRGPAQ
Trigger: CTGCGCTGGCCCTCTCCCTCATTGAGCGCTACGAGC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAAGGGCAGGCTGTTGGTaGCCCCATCCAGTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPRAGCW*PHPVVG
Trigger: ACCGACCACTGGATGGGGTCACCAACAGCCTGCCCT...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGTAGACACGGCGGTGTaGCAGGCTGAAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWVDTAV*QAEGAA
Trigger: GGCAGCGCCTTCAGCCTGGCACACCGCCGTGTCTAC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGGATGGCATGCAGGTaGCGCGCCATCACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWARMACR*RAITRC
Trigger: GCAGCGCGTGATGGCGCGGCACCTGCATGCCATCCT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCCTCCACAGTGCCCCTaGCTGCGCGGAGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGPPQCP*LRGAGS
Trigger: GGACCCGGCTCCGCGCAGGCAGGGGCACTGTGGAGG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGTGCTGGGCATCAGCTaGCGATGGGGCGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPVLGIS*RWGDEV
Trigger: GACCTCATCGCCCCATCGCCAGCTGATGCCCAGCAC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCCCAGCACCCAGTGCTaGGCATCAGCTGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWPSTQC*ASAGDG
Trigger: CCCATCGCCAGCTGATGCCCAGCACTGGGTGCTGGG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAAGGCTTCAGTGCTGCTaGGCCCGGCTAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPRLQCC*ARLAGP
Trigger: AGGACCAGCTAGCCGGGCCCAGCAGCACTGAAGCCT...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGTGATGACAGCAGTCTaGCGGCTGGCCACGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWVMTAV*RLATSR
Trigger: CCGGGACGTGGCCAGCCGCCAGACTGCTGTCATCAC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGACTGGGCTAGCTCCTaGTCCCCAGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWDWASS*SPGRQQ
Trigger: CTGCTGCCTCCCTGGGGACCAGGAGCTAGCCCAGTC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGACTGGGCTAGCTCCTaGTCCCCAGGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWADWASS*SPGRQQ
Trigger: CTGCTGCCTCCCTGGGGACCAGGAGCTAGCCCAGTC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTCCTTGACCACTCGCTaGCCGGAGGGTGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWSLTTR*PEGGEG
Trigger: GCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCGGAACTGTCGCCCTTaGAGGGGAGCAGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSRNCRP*RGAGAE
Trigger: CTCCGCCCCTGCTCCCCTCCAAGGGCGACAGTTCCG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR TCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGACTCCGGGGTCCGCATaGCCTTGCGGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLTPGSA*PCGTPA
Trigger: GGCAGGAGTCCCGCAAGGTCATGCGGACCCCGGAGT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGAGGGCAGGCTGTTGGTaGCCCCATCCAGTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWRAGCW*PHPVVG
Trigger: ACCGACCACTGGATGGGGTCACCAACAGCCTGCCCT...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATTGGTCATCTGCCGCTaGGCCTTGGCAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPLVICR*ALAVSL
Trigger: CAGCGAGACTGCCAAGGCGCAGCGGCAGATGACCAA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGGGCCCAGGATGGCATaGAGGTGCCGCGCCATCACG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLGPRMA*RCRAIT
Trigger: CGTGATGGCGCGGCACCTGCATGCCATCCTGGGCCC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCCTTGGGCTTGTGCTaGACACGGCTCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSLGLC*TRLLTA
Trigger: GGCAGTGAGGAGCCGTGTGCAGCACAAGCCCAAGGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCCGGGTCCGGGGCAGTaGCGCCTCCAGTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGPGPGQ*RLQCFM
Trigger: CATAAAACACTGGAGGCGGCACTGCCCCGGACCCGG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCGGATCCCCAGGCACTaGATGGCCCTCCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSRIPRH*MALHSA
Trigger: GGCACTGTGGAGGGCCATGCAGTGCCTGGGGATCCG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCGATGGAGAACAGCTaGGACTCCGGGGTCCGCATG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSMENS*DSGVRM
Trigger: CATGCGGACCCCGGAGTCCCAGCTGTTCTCCATCGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCGTCTGACACCACAGTaGCCTCAGGGCCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSRLTPQ*PQGHPP
Trigger: GGGAGGGTGGCCCTGAGGCCACTGTGGTGTCAGACG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCGCTGGCCGGAGGGTaGAGAGGGCTGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSLAGG*RGLQCY
Trigger: ATAACACTGCAGCCCTCTCCACCCTCCGGCCAGCGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGCGCTCTCTCCTCCATaGGCTGGACTTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPALSPP*AGLHLQ
Trigger: CTGAAGGTGAAGTCCAGCTCATGGAGGAGAGAGCGC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGTCCCGGATGGCCCTaGGCACATCGCAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWASPGWP*AHRRRG
Trigger: TCCTCTTCTGCGATGTGCTCAGGGCCATCCGGGACT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGGTAGGGGGACGCCTTaGAGGCATAGTCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSGRGTP*RHSPGW
Trigger: CCATCCGGGACTATGCCTTCAAGGCGTCCCCCTACC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGGCTCCTGTGCTAGCCTaGGCTTGTCCTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGAPVLA*ACPPWA
Trigger: AGCCCAAGGAGGACAAGCTCAGGCTAGCACAGGAGC...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTCATCCTGTAGGCCGTaGAGGGTCAGGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGSSCRP*RVRKSR
Trigger: CCGGGACTTCCTGACCCTGCACGGCCTACAGGATGA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334661.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCTCCAGACCCTCCGTaGGGTGCCCCATTCGCACCT +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSPDPP*GAPFAP
Trigger: AGGTGCGAATGGGGCACCGCACGGAGGGTCTGGAGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCCGTCCTTGGTCATCTaGCGCTGCGCCTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSPSLVI*RCALAV
Trigger: GACTGCCAAGGCGCAGCGGCAGATGACCAAGGACGG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTGTAGGCTTCAGTGCTaGTGGGCCCGGCTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGCRLQC*WARLAG
Trigger: ACCAGCTAGCCGGGCCCAGCAGCACTGAAGCCTACA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTTGTAGGCTTCAGTGCTaGTGGGCCCGGCTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWACRLQC*WARLAG
Trigger: ACCAGCTAGCCGGGCCCAGCAGCACTGAAGCCTACA...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGGATGTAGGCTTCAGTaGTGCTGGGCCCGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWGCRLQ*CWARLA
Trigger: AGCTAGCCGGGCCCAGCAGCACTGAAGCCTACATCC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGGCATCGGCAGCCTTTaGACAGTGCCCGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAGIGSL*TVPGCR
Trigger: CCTACATCCGGGCACTGTGCAAAGGCTGCCGATGCC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCGCGCCATCACGCGCTaGTGCTCCAGTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLRAITR*CSSVQW
Trigger: CCACTGCACACTGGAGCAGCAGCGCGTGATGGCGCG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCCTCCTTGGGCTTGTaGTGCACACGGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSSLGL*CTRLLT
Trigger: AGTGAGGAGCCGTGTGCAGCACAAGCCCAAGGAGGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGTTGAGCCGCTTCCGTaGCCACCAGGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGVEPLP*PPGPLS
Trigger: GCTCAGGGGCCCTGGTGGGCACGGAAGCGGCTCAAC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTTCACCTTCAGGAGCTaGCTGCCCTTCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGFTFRS*LPFSSA
Trigger: GGCGCTGCTGAAGGGCAGCCAGCTCCTGAAGGTGAA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTCGATGGAGAACAGCTaGGACTCCGGGGTCCGCATG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWSMENS*DSGVRM
Trigger: CATGCGGACCCCGGAGTCCCAGCTGTTCTCCATCGA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGTGCTGGGCATCAGCTaGCGATGGGGCGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSVLGIS*RWGDEV
Trigger: GACCTCATCGCCCCATCGCCAGCTGATGCCCAGCAC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGCATGGGGCCCAGGATaGCATGCAGGTGCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGAWGPG*HAGAAP
Trigger: TGGCGCGGCACCTGCATGCCATCCTGGGCCCCATGC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCAGGGGTGCCAGGACTaGAGAAGCCCCCAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWQGCQD*RSPQSG
Trigger: TCCACTTTGGGGGCTTCTCCAGTCCTGGCACCCCTG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTCCTGGAAGCGGCCCTaGTACACGTCCATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWSWKRP*YTSISG
Trigger: GCCAGAGATGGACGTGTACCAGGGCCGCTTCCAGGA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGTGATGACAGCAGTCTaGCGGCTGGCCACGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLVMTAV*RLATSR
Trigger: CCGGGACGTGGCCAGCCGCCAGACTGCTGTCATCAC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGACAGCTCCAGGGACTaGGCTAGCTCCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSDSSRD*ASSWSP
Trigger: TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTCGCTGGCCGGAGGGTaGAGAGGGCTGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWSLAGG*RGLQCY
Trigger: ATAACACTGCAGCCCTCTCCACCCTCCGGCCAGCGA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGCAGGTAGAGCTCCCTaGAGCGGCTCCGGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGAGRAP*SGSGSG
Trigger: TCCGGAGCCGGAGCCGCTCCAGGGAGCTCTACCTGC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACTGGTCCATGGAGCCTaGGTGGTGGATGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPLVHGA*VVDDLV
Trigger: CACAAGATCATCCACCACTCAGGCTCCATGGACCAG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAAGTGGTCACACTCCCTaGAGATCTTCCGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSGHTP*RSSGHS
Trigger: GCTATGCCCGGAAGATCTTCAGGGAGTGTGACCACT...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCCACCAAGAAGCGGATaGGGGCAAGGTCAGGCACAA +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWPPRSG*GQGQAQ
Trigger: TTGTGCCTGACCTTGCCCTCATCCGCTTCTTGGTGG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCACAAAGAGGGTGGCTaGTGGATGCTGGTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWHKEGG*WMLVPV
Trigger: AACGGGGACCAGCATCCATCAGCCACCCTCTTTGTG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTCACAAAGAGGGTGGCTaGTGGATGCTGGTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAHKEGG*WMLVPV
Trigger: AACGGGGACCAGCATCCATCAGCCACCCTCTTTGTG...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCCTTCAGGAGCTGGCTaGCCTTCAGCAGCGCCTGTA +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSPSGAG*PSAAPV
Trigger: TACAGGCGCTGCTGAAGGGCAGCCAGCTCCTGAAGG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGACCTTGCGGGACTCCTaGCAGATGGTCTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWTLRDS*QMVLQS
Trigger: GGACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGT...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTGGTGGATGATCTTGTaGAGCCCCAGCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGWWMIL*SPSTQC
Trigger: GCACTGGGTGCTGGGGCTGCACAAGATCATCCACCA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTGGTGGATGATCTTGTaGAGCCCCAGCACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWWWMIL*SPSTQC
Trigger: GCACTGGGTGCTGGGGCTGCACAAGATCATCCACCA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTCCTCCCGCTGCTGGTaGTGCAGGAACGTCACTAAC +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGSSRCW*CRNVTN
Trigger: GTTAGTGACGTTCCTGCAGCACCAGCAGCGGGAGGA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGGATGTAGGCTTCAGTaGTGCTGGGCCCGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSGCRLQ*CWARLA
Trigger: AGCTAGCCGGGCCCAGCAGCACTGAAGCCTACATCC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGATCTTCCCCTTCAGTTaGTCAGGGGAGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWIFPFS*SGEGRL
Trigger: CAGCCTGCCCTCCCCTGAGCAACTGAAGGGGAAGAT...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCCTTGGGCTTGTGCTaGACACGGCTCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSLGLC*TRLLTA
Trigger: GGCAGTGAGGAGCCGTGTGCAGCACAAGCCCAAGGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAAGGGTGGCTGATGGATaGTGGTCCCCGTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPRVADG*WSPFLD
Trigger: GTCTAAGAACGGGGACCAGCATCCATCAGCCACCCT...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGAGCGGCGGGACCTATaGCCCCTGAAGGTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGERRDL*PLKVRR
Trigger: TCGCCTCACCTTCAGGGGGCATAGGTCCCGCCGCTC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCCCAGCACCCAGTGCTaGGCATCAGCTGGCGATGGG +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGPSTQC*ASAGDG
Trigger: CCCATCGCCAGCTGATGCCCAGCACTGGGTGCTGGG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTCCAGGGAGTCTGTCTaGGAGTGGTCACACTCCCTG +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGSRESV*EWSHSL
Trigger: CAGGGAGTGTGACCACTCCCAGACAGACTCCCTGGA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGAGGCTTCAGTGCTGCTaGGCCCGGCTAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLRLQCC*ARLAGP
Trigger: AGGACCAGCTAGCCGGGCCCAGCAGCACTGAAGCCT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGGTCGGTTCAACAGCATaGGGCCCAGGATGGCATGCA +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGVGSTA*GPGWHA
Trigger: TGCATGCCATCCTGGGCCCCATGCTGTTGAACCGAC...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACCGTTTCCTGATTCTTaGAGCAGTCGAAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPPFPDS*SSRRAR
Trigger: CCGTGCCCTTCGACTGCTCCAAGAATCAGGAAACGG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGAGGTGCCCCACGTTGTaGCGGACAAAGCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGRCPTL*RTKPFP
Trigger: AGGAAACGGCTTTGTCCGCCACAACGTGGGGCACCT...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTTTCAGGGCCACGATCTaGCAGCCCCCATTCCACATC +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAFRATI*QPPFHI
Trigger: GATGTGGAATGGGGGCTGCCAGATCGTGGCCCTGAA...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCCTGGAAGCGGCCCTaGTACACGTCCATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSWKRP*YTSISG
Trigger: GCCAGAGATGGACGTGTACCAGGGCCGCTTCCAGGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCCCGGCTCACGCCATaGATCTCCACTGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSRLTP*ISTVTL
Trigger: CAAAGTGACAGTGGAGATCCATGGCGTGAGCCGGGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGACAGCTCCAGGGACTaGGCTAGCTCCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLDSSRD*ASSWSP
Trigger: TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCCCATTCGCACCTCCTaGATGTCCTCGATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGPIRTS*MSSMEN
Trigger: GTTCTCCATCGAGGACATTCAGGAGGTGCGAATGGG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCAGCCTGAGTGGTGGATaGTCTTGTGCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSLSGG*SCAAPA
Trigger: TGCTGGGGCTGCACAAGATCATCCACCACTCAGGCT...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTCTGGTCCATGGAGCCTaGGTGGTGGATGATCTTGTG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWALVHGA*VVDDLV
Trigger: CACAAGATCATCCACCACTCAGGCTCCATGGACCAG...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACGTCCACCTGGATGTTaGGCTCCTTCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPRPPGC*APSGSS
Trigger: AGAACTTCCTGAAGGAGCTCAACATCCAGGTGGACG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGTGGTCACACTCCCTaGAGATCTTCCGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWASGHTP*RSSGHS
Trigger: GCTATGCCCGGAAGATCTTCAGGGAGTGTGACCACT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACAGGTAGGTGTTGTGTaGAGAGGACACCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPQVGVV*RGHQVV
Trigger: CACTACCTGGTGTCCTCTTCACACAACACCTACCTG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGGTAGGGGGACGCCTTaGAGGCATAGTCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGGRGTP*RHSPGW
Trigger: CCATCCGGGACTATGCCTTCAAGGCGTCCCCCTACC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCCTTCAGGAGCTGGCTaGCCTTCAGCAGCGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLPSGAG*PSAAPV
Trigger: TACAGGCGCTGCTGAAGGGCAGCCAGCTCCTGAAGG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGTCTCCAGACCCTCCGTaGGGTGCCCCATTCGCACCT +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGSPDPP*GAPFAP
Trigger: AGGTGCGAATGGGGCACCGCACGGAGGGTCTGGAGA...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCCTCCCGCTGCTGGTaGTGCAGGAACGTCACTAAC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSSRCW*CRNVTN
Trigger: GTTAGTGACGTTCCTGCAGCACCAGCAGCGGGAGGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCCGTCCTTGGTCATCTaGCGCTGCGCCTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGPSLVI*RCALAV
Trigger: GACTGCCAAGGCGCAGCGGCAGATGACCAAGGACGG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGGCATCGGCAGCCTTTaGACAGTGCCCGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLGIGSL*TVPGCR
Trigger: CCTACATCCGGGCACTGTGCAAAGGCTGCCGATGCC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCCTCCTTGGGCTTGTaGTGCACACGGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSSLGL*CTRLLT
Trigger: AGTGAGGAGCCGTGTGCAGCACAAGCCCAAGGAGGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGTTCACCTTCAGGAGCTaGCTGCCCTTCAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLFTFRS*LPFSSA
Trigger: GGCGCTGCTGAAGGGCAGCCAGCTCCTGAAGGTGAA...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACTCTCCTCCATGAGCTaGACTTCACCTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPLSSMS*TSPSGA
Trigger: AGCTCCTGAAGGTGAAGTCCAGCTCATGGAGGAGAG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTATGGAGCCTGAGTGGTaGATGATCTTGTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAMEPEW*MILCSP
Trigger: GGGGCTGCACAAGATCATCCACCACTCAGGCTCCAT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGAGTCTGTCTGGGAGTaGTCACACTCCCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPESVWE*SHSLKI
Trigger: GATCTTCAGGGAGTGTGACCACTCCCAGACAGACTC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCCAGGGAGTCTGTCTaGGAGTGGTCACACTCCCTG +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSRESV*EWSHSL
Trigger: CAGGGAGTGTGACCACTCCCAGACAGACTCCCTGGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTCAGGTAGTGGCTAAGTaGCTGGCCCATGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAQVVAK*LAHVLV
Trigger: TACCAGGACATGGGCCAGCCACTTAGCCACTACCTG...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGGTGACCCCATCCAGTaGTCGGTTCAACAGCATGGG +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSGDPIQ*SVQQHG
Trigger: CCCATGCTGTTGAACCGACCACTGGATGGGGTCACC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCCACGGGGCTGTAGTTaGAGGAGTCTGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWPRGCS*RSLFSI
Trigger: GATGGAGAACAGACTCCTCCAACTACAGCCCCGTGG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTTCAGGGCCACGATCTaGCAGCCCCCATTCCACATC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSFRATI*QPPFHI
Trigger: GATGTGGAATGGGGGCTGCCAGATCGTGGCCCTGAA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTTCTGGCCCAGGTGTCTaGAAATTCAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWASGPGV*KFRATI
Trigger: GATCGTGGCCCTGAATTTCCAGACACCTGGGCCAGA...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTTCCCGGCTCACGCCATaGATCTCCACTGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWASRLTP*ISTVTL
Trigger: CAAAGTGACAGTGGAGATCCATGGCGTGAGCCGGGA...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGCGCTCTCTCCTCCATaGGCTGGACTTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLALSPP*AGLHLQ
Trigger: CTGAAGGTGAAGTCCAGCTCATGGAGGAGAGAGCGC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATATTGCGCTGGTCCTTaGAGACAATGGAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPYCAGP*RQWRSS
Trigger: GCTGCTTCTCCATTGTCTTCAAGGACCAGCGCAATA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGAGCCTGAGTGGTGGATaGTCTTGTGCAGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLSLSGG*SCAAPA
Trigger: TGCTGGGGCTGCACAAGATCATCCACCACTCAGGCT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCGTCCACCTGGATGTTaGGCTCCTTCAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGRPPGC*APSGSS
Trigger: AGAACTTCCTGAAGGAGCTCAACATCCAGGTGGACG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGAGGAACGTCACTAACTaGTCCACCGACAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWRNVTN*STDRVS
Trigger: GGAGACTCTGTCGGTGGATCAGTTAGTGACGTTCCT...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCCGACAGTAAGTACATaGGGAAGCCGTCCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGPTVST*GSRPWS
Trigger: TGACCAAGGACGGCTTCCTCATGTACTTACTGTCGG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTATAGCCGTGGTAGATaGTTGGTTCCTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWYSRGR*LVPGWA
Trigger: GGCCCAACCAGGAACCAATCATCTACCACGGCTATA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTATAGCCGTGGTAGATaGTTGGTTCCTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGYSRGR*LVPGWA
Trigger: GGCCCAACCAGGAACCAATCATCTACCACGGCTATA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGAGTCCCGGATGGCCCTaGGCACATCGCAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGSPGWP*AHRRRG
Trigger: TCCTCTTCTGCGATGTGCTCAGGGCCATCCGGGACT...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGAGCCTCGTCTTCGTCTaGCACCACAGTGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGSLVFV*HHSGLR
Trigger: CCTGAGGCCACTGTGGTGTCAGACGAAGACGAGGCT...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGCTCCTGTGCTAGCCTaGGCTTGTCCTCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGAPVLA*ACPPWA
Trigger: AGCCCAAGGAGGACAAGCTCAGGCTAGCACAGGAGC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGGCGGTATCCTTGCTTaGGGCTGTTCAAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLGGILA*GCSRGW
Trigger: CCATCCCCTTGAACAGCCTCAAGCAAGGATACCGCC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGCCTGCCAGATGGTCTTaGAGTCCTCCTGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWPARWS*SPPATC
Trigger: ACAAGTTGCAGGAGGACTGCAAGACCATCTGGCAGG...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGACCTTGCGGGACTCCTaGCAGATGGTCTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLTLRDS*QMVLQS
Trigger: GGACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGTTGGTCATCTGCCGCTaGGCCTTGGCAGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGLVICR*ALAVSL
Trigger: CAGCGAGACTGCCAAGGCGCAGCGGCAGATGACCAA...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGATCTTCCCCTTCAGTTaGTCAGGGGAGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLIFPFS*SGEGRL
Trigger: CAGCCTGCCCTCCCCTGAGCAACTGAAGGGGAAGAT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCAGCCGGGTAGATTCTaGTCAGGTGCCCCACGTTGT +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLQPGRF*SGAPRC
Trigger: ACAACGTGGGGCACCTGAGCAGAATCTACCCGGCTG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGACTTTTGGCAGCTGCTaGCCCGAAATGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGTFGSC*PEMTLM
Trigger: CATCAGGGTCATTTCGGGGCAGCAGCTGCCAAAAGT...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTACTTTTGGCAGCTGCTaGCCCGAAATGACCCTGATG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWATFGSC*PEMTLM
Trigger: CATCAGGGTCATTTCGGGGCAGCAGCTGCCAAAAGT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTTTGACTTTTGGCAGCTaGTGCCCCGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWALTFGS*CPEMTL
Trigger: CAGGGTCATTTCGGGGCAGCAGCTGCCAAAAGTCAA...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTACATGGCGGTATCCTTaGTTGAGGCTGTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWATWRYP*LRLFKG
Trigger: CCCCTTGAACAGCCTCAAGCAAGGATACCGCCATGT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGACATGGCGGTATCCTTaGTTGAGGCTGTTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWTWRYP*LRLFKG
Trigger: CCCCTTGAACAGCCTCAAGCAAGGATACCGCCATGT...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGCCTCCAGTGTTTTATaGTCACAACACCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPASSVL*SQHPLL
Trigger: GAGCAGAGGGTGTTGTGAGCATAAAACACTGGAGGC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCATGGAGCCTGAGTGGTaGATGATCTTGTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSMEPEW*MILCSP
Trigger: GGGGCTGCACAAGATCATCCACCACTCAGGCTCCAT...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTCCATGGAGCCTGAGTaGTGGATGATCTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGSMEPE*WMILCS
Trigger: GCTGCACAAGATCATCCACCACTCAGGCTCCATGGA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGCCGTGGTAGATGATTaGTTCCTGGTTGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLAVVDD*FLVGPV
Trigger: GACGGGCCCAACCAGGAACCAATCATCTACCACGGC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGTCGGTTCAACAGCATaGGGCCCAGGATGGCATGCA +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLVGSTA*GPGWHA
Trigger: TGCATGCCATCCTGGGCCCCATGCTGTTGAACCGAC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCAGGGGTGCCAGGACTaGAGAAGCCCCCAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGQGCQD*RSPQSG
Trigger: TCCACTTTGGGGGCTTCTCCAGTCCTGGCACCCCTG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCCACGGGGCTGTAGTTaGAGGAGTCTGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSPRGCS*RSLFSI
Trigger: GATGGAGAACAGACTCCTCCAACTACAGCCCCGTGG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGTACACGTCCATCTCTaGCCCAGGTGTCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPVHVHL*PRCLEI
Trigger: AATTTCCAGACACCTGGGCCAGAGATGGACGTGTAC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGTGGCTGATGGATGCTaGTCCCCGTTCTTAGACATG +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWVADGC*SPFLDM
Trigger: CATGTCTAAGAACGGGGACCAGCATCCATCAGCCAC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGGTGGCTGATGGATGCTaGTCCCCGTTCTTAGACATG +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGVADGC*SPFLDM
Trigger: CATGTCTAAGAACGGGGACCAGCATCCATCAGCCAC...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGCGATGGGGCGATaGGGTCTAGTGTATTGCGCT +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGLAMGR*GLVYCA
Trigger: AGCGCAATACACTAGACCTCATCGCCCCATCGCCAG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTTTCGCAAGCAGGAGTaGATCCAGTGCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWFRKQE*IQCCSF
Trigger: GAAGCTACAGCACTGGATTCACTCCTGCTTGCGAAA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTTTTCGCAAGCAGGAGTaGATCCAGTGCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAFRKQE*IQCCSF
Trigger: GAAGCTACAGCACTGGATTCACTCCTGCTTGCGAAA...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCAGGTAGGTGTTGTGTaGAGAGGACACCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSQVGVV*RGHQVV
Trigger: CACTACCTGGTGTCCTCTTCACACAACACCTACCTG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCCACCAAGAAGCGGATaGGGGCAAGGTCAGGCACAA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGPPRSG*GQGQAQ
Trigger: TTGTGCCTGACCTTGCCCTCATCCGCTTCTTGGTGG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTGGTACTCTGGCCAATaGAGTCATTCTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGWYSGQ*SHSWRR
Trigger: CCTCCTCCAAGAATGACTTCATTGGCCAGAGTACCA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGGCGGTATCCTTGCTTaGGGCTGTTCAAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGGGILA*GCSRGW
Trigger: CCATCCCCTTGAACAGCCTCAAGCAAGGATACCGCC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCCTGCCAGATGGTCTTaGAGTCCTCCTGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSPARWS*SPPATC
Trigger: ACAAGTTGCAGGAGGACTGCAAGACCATCTGGCAGG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTTGACTTTTGGCAGCTaGTGCCCCGAAATGACCCTG +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSLTFGS*CPEMTL
Trigger: CAGGGTCATTTCGGGGCAGCAGCTGCCAAAAGTCAA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGCCGTGGTAGATGATTaGTTCCTGGTTGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGAVVDD*FLVGPV
Trigger: GACGGGCCCAACCAGGAACCAATCATCTACCACGGC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGAGGTGCCCCACGTTGTaGCGGACAAAGCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGRCPTL*RTKPFP
Trigger: AGGAAACGGCTTTGTCCGCCACAACGTGGGGCACCT...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGTCTGGCCCAGGTGTCTaGAAATTCAGGGCCACGATC +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLSGPGV*KFRATI
Trigger: GATCGTGGCCCTGAATTTCCAGACACCTGGGCCAGA...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGTACACGTCCATCTCTaGCCCAGGTGTCTGGAAATT +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAVHVHL*PRCLEI
Trigger: AATTTCCAGACACCTGGGCCAGAGATGGACGTGTAC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCTCCGTGTCCCACCATaGGTTGAAACCATTGTTGGT +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGLRVPP*VETIVG
Trigger: ACCAACAATGGTTTCAACCCATGGTGGGACACGGAG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATTCTTAGACATGAGGTaGACATGGCGGTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPFLDMR*TWRYPC
Trigger: GCAAGGATACCGCCATGTCCACCTCATGTCTAAGAA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCTTCACAAAGAGGGTaGCTGATGGATGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSSQRG*LMDAGP
Trigger: GGGACCAGCATCCATCAGCCACCCTCTTTGTGAAGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGACGAGAGGGAAATCTaGGCTGAGGGGGTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLDEREI*AEGVVR
Trigger: TCTGACTACCCCCTCAGCCCAGATTTCCCTCTCGTC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR TCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGAGTTCTGCAGCTCCTTaGAGCTCATCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGSSAAP*SSSCCP
Trigger: AGGACAACAAGATGAGCTTCAAGGAGCTGCAGAACT...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTTATTCCTAACGGAATaGAGGACAGCTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWLFLTE*RTAPGT
Trigger: AGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGAGGGTGGCTGATGGATaGTGGTCCCCGTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGRVADG*WSPFLD
Trigger: GTCTAAGAACGGGGACCAGCATCCATCAGCCACCCT...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR GCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGAGGGTGGAGAGGGCTaGAGTGTTATTCCTAACGGA +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLEGGEG*SVIPNG
Trigger: TCCGTTAGGAATAACACTGCAGCCCTCTCCACCCTC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCTCTCCTCCATGAGCTaGACTTCACCTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLLSSMS*TSPSGA
Trigger: AGCTCCTGAAGGTGAAGTCCAGCTCATGGAGGAGAG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCAGGTAGTGGCTAAGTaGCTGGCCCATGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGQVVAK*LAHVLV
Trigger: TACCAGGACATGGGCCAGCCACTTAGCCACTACCTG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGTCTTCACAAAGAGGGTaGCTGATGGATGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLSSQRG*LMDAGP
Trigger: GGGACCAGCATCCATCAGCCACCCTCTTTGTGAAGA...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGGGCTGAAGGCAATTTaGGGGCCTAGCTCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGGLKAI*GPSSEQ
Trigger: TTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGGGCAAAGTAAATGAGTaGGGGGAGTCAGAATACAGG +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGGKVNE*GESEYR
Trigger: CCTGTATTCTGACTCCCCCCACTCATTTACTTTGCC...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS-3UTR TCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGTATTGCGCTGGTCCTTaGAGACAATGGAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLYCAGP*RQWRSS
Trigger: GCTGCTTCTCCATTGTCTTCAAGGACCAGCGCAATA...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGAGGAACGTCACTAACTaGTCCACCGACAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGRNVTN*STDRVS
Trigger: GGAGACTCTGTCGGTGGATCAGTTAGTGACGTTCCT...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCCGACAGTAAGTACATaGGGAAGCCGTCCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGPTVST*GSRPWS
Trigger: TGACCAAGGACGGCTTCCTCATGTACTTACTGTCGG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTTATTCCTAACGGAATaGAGGACAGCTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSLFLTE*RTAPGT
Trigger: AGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCTCCACTGTCACTTTaGGGTCCACAATTGAATTCT +
Preference number: 4 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSPLSL*GPQLNS
Trigger: AGAATTCAATTGTGGACCCCAAAGTGACAGTGGAGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCTCCGTGTCCCACCATaGGTTGAAACCATTGTTGGT +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLLRVPP*VETIVG
Trigger: ACCAACAATGGTTTCAACCCATGGTGGGACACGGAG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAAGGGGATGGTACTCTaGCCAATGAAGTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAKGMVL*PMKSFL
Trigger: CAAGAATGACTTCATTGGCCAGAGTACCATCCCCTT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTTCTTAGACATGAGGTaGACATGGCGGTATCCTTGC +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSFLDMR*TWRYPC
Trigger: GCAAGGATACCGCCATGTCCACCTCATGTCTAAGAA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGTGGTACTCTGGCCAATaGAGTCATTCTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGWYSGQ*SHSWRR
Trigger: CCTCCTCCAAGAATGACTTCATTGGCCAGAGTACCA...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCTAGTGTATTGCGCTaGTCCTTGAAGACAATGGAG +
Preference number: 4 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSSVLR*SLKTME
Trigger: CTCCATTGTCTTCAAGGACCAGCGCAATACACTAGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGTCTCCACTGTCACTTTaGGGTCCACAATTGAATTCT +
Preference number: 4 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGSPLSL*GPQLNS
Trigger: AGAATTCAATTGTGGACCCCAAAGTGACAGTGGAGA...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGAGTTCTGCAGCTCCTTaGAGCTCATCTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGSSAAP*SSSCCP
Trigger: AGGACAACAAGATGAGCTTCAAGGAGCTGCAGAACT...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR TCA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGTTTTATAAAAATCCTTaGCCACTCGCTGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGFYKNP*PLAGRR
Trigger: CCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAA...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGTCTAGTGTATTGCGCTaGTCCTTGAAGACAATGGAG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLSSVLR*SLKTME
Trigger: CTCCATTGTCTTCAAGGACCAGCGCAATACACTAGA...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGATTCTTGTTGACTTTTaGCAGCTGCTGCCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLILVDF*QLLPRN
Trigger: ATTTCGGGGCAGCAGCTGCCAAAAGTCAACAAGAAT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CCA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGAAGGGGATGGTACTCTaGCCAATGAAGTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLKGMVL*PMKSFL
Trigger: CAAGAATGACTTCATTGGCCAGAGTACCATCCCCTT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS GCA 90 bp GCGTCCTGCTCCAGCTGCCTTCCCATTCCCCCGCAGATCTCGGAGTaGTCTGCGCCCCTTACCCAGCCTCCGTCCATTGAGCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: ASCSSCLPIPPQISE*SAPLTQPPSIERRH
Trigger: GTGGCGGCGCTCAATGGACGGAGGCTGGGTAAGGGGCGCAGAGCACTCCGAGATCTGCGGGGGAATGGGAAGGCAGCTGGAGCAGGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS GCA 90 bp GATCCACCGACAGAGTCTCCCCTGAGCCCGCGGCCTCGGCGAAGGTaGGGTCGATCTCCACCCGCTGGGTCAGCATCTTGTAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: DPPTESPLSPRPRRR*GRSPPAGSASCRRP
Trigger: AGGCCTTCTACAAGATGCTGACCCAGCGGGTGGAGATCGACCGCACCTTCGCCGAGGCCGCGGGCTCAGGGGAGACTCTGTCGGTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS CCA 90 bp GCCACTACAGGCAGGACAGAGCAGTCACAGGCTGTGGGCTGGCCCTaGGGCCCTAGAGCACAGCCTGCTCAGGGTACACTAAGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: ATTGRTEQSQAVGWP*GPRAQPAQGTLRPR
Trigger: CCTAGGCCTTAGTGTACCCTGAGCAGGCTGTGCTCTAGGGCCCCAGGGCCAGCCCACAGCCTGTGACTGCTCTGTCCTGCCTGTAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461445.5
ENST00000495395.1
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGCGGAACTGTCGCCCTaGGAGGGGAGCAGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPAELSP*EGSRGG
Trigger: TCCGCCCCTGCTCCCCTCCAAGGGCGACAGTTCCGC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS GCA 90 bp AGCGGTCCTCGGGCACATCACGGGCGAACTTCTCCAGACCCTCCGTaGGGTGCCCCATTCGCACCTCCTGAATGTCCTCGATGGAGAACA +
Preference number: 5 (lower is better)
Translates to: SGPRAHHGRTSPDPP*GAPFAPPECPRWRT
Trigger: TGTTCTCCATCGAGGACATTCAGGAGGTGCGAATGGGGCACCGCACGGAGGGTCTGGAGAAGTTCGCCCGTGATGTGCCCGAGGACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS GCA 90 bp TCCAAGGCAAATGGCCCCGCGTTAAGGGACAAGTGGTCGGCGTCCTaGTCCAGCTGCCTTCCCATTCCCCCGCAGATCTCGGAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SKANGPALRDKWSAS*SSCLPIPPQISECS
Trigger: AGAGCACTCCGAGATCTGCGGGGGAATGGGAAGGCAGCTGGAGCAGGACGCCGACCACTTGTCCCTTAACGCGGGGCCATTTGCCTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS GCA 90 bp AGCGGTCCTCGGGCACATCACGGGCGAACTTCTCCAGACCCTCCGTaGGGTGCCCCATTCGCACCTCCTGAATGTCCTCGATGGAGACTT +
Preference number: 5 (lower is better)
Translates to: SGPRAHHGRTSPDPP*GAPFAPPECPRWRL
Trigger: AAGTCTCCATCGAGGACATTCAGGAGGTGCGAATGGGGCACCGCACGGAGGGTCTGGAGAAGTTCGCCCGTGATGTGCCCGAGGACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479619.1
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATACCCACAGGCCCCGTaGTCCTGGAAGCGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPYPQAP*SWKRPW
Trigger: CCAGGGCCGCTTCCAGGACAACGGGGCCTGTGGGTA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS TCA 90 bp CCTGAATGTCCTCGATGGAGAACAGCTGGGACTCCGGGGTCCGCATaGCCTTGCGGGACTCCTGCCAGATGGTCTTGCAGTCCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: PECPRWRTAGTPGSA*PCGTPARWSCSPPA
Trigger: TGCAGGAGGACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGTCATGCGGACCCCGGAGTCCCAGCTGTTCTCCATCGAGGACATTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CCA 90 bp GAGCCTGAGTGGTGGATGATCTTGTGCAGCCCCAGCACCCAGTGCTaGGCATCAGCTGGCGATGGGGCGATGAGGTCTAGTGTATTGCGC +
Preference number: 5 (lower is better)
Translates to: EPEWWMILCSPSTQC*ASAGDGAMRSSVLR
Trigger: GCGCAATACACTAGACCTCATCGCCCCATCGCCAGCTGATGCCCAGCACTGGGTGCTGGGGCTGCACAAGATCATCCACCACTCAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS CCA 90 bp TGTCCTCCTGGGGAACACGGGGAGGCCCGGGTTAGATTCAGTGGTTaGGGTAGGGTAGGCACTGAGAAAGCCAGAAACCCAGGCGCAGAG +
Preference number: 5 (lower is better)
Translates to: CPPGEHGEARVRFSG*GRVGTEKARNPGAE
Trigger: CTCTGCGCCTGGGTTTCTGGCTTTCTCAGTGCCTACCCTACCCCAACCACTGAATCTAACCCGGGCCTCCCCGTGTTCCCCAGGAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461445.5
CDS CCA 90 bp GTGTCCCACCATGGGTTGAAACCATTGTTGGTGATGACAGCAGTCTaGCGGCTGGCCACGTCCCGGCTCACGCCATGGATCTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: VSHHGLKPLLVMTAV*RLATSRLTPWISTV
Trigger: GACAGTGGAGATCCATGGCGTGAGCCGGGACGTGGCCAGCCGCCAGACTGCTGTCATCACCAACAATGGTTTCAACCCATGGTGGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CCA 90 bp CCAATTAAAGGCTCCAAGGCAAATGGCCCCGCGTTAAGGGACAAGTaGTCGGCGTCCTGCTCCAGCTGCCTTCCCATTCCCCCGCAGATC +
Preference number: 5 (lower is better)
Translates to: PIKGSKANGPALRDK*SASCSSCLPIPPQI
Trigger: GATCTGCGGGGGAATGGGAAGGCAGCTGGAGCAGGACGCCGACCACTTGTCCCTTAACGCGGGGCCATTTGCCTTGGAGCCTTTAATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAATGAGGAAGCCGTCCTaGGTCATCTGCCGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPMRKPS*VICRCA
Trigger: GGCGCAGCGGCAGATGACCAAGGACGGCTTCCTCAT...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTACCCACAGGCCCCGTaGTCCTGGAAGCGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSYPQAP*SWKRPW
Trigger: CCAGGGCCGCTTCCAGGACAACGGGGCCTGTGGGTA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCCCAGCCTCCGTCCATaGAGCGCCGCCACCTTAAGG +
Preference number: 5 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGPSLRP*SAATLR
Trigger: CCTTAAGGTGGCGGCGCTCAATGGACGGAGGCTGGG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS GCA 90 bp ATGGAGCCTGAGTGGTGGATGATCTTGTGCAGCCCCAGCACCCAGTaGTGGGCATCAGCTGGCGATGGGGCGATGAGGTCTAGTGTATTG +
Preference number: 5 (lower is better)
Translates to: MEPEWWMILCSPSTQ*WASAGDGAMRSSVL
Trigger: CAATACACTAGACCTCATCGCCCCATCGCCAGCTGATGCCCAGCACTGGGTGCTGGGGCTGCACAAGATCATCCACCACTCAGGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS CCA 90 bp AGACTGATATTACCAGCTCCACAAGCCCCTGCATTTGACCCTGCTTaGGTCCTCAGAGCTCCACTGCATGGCCTTCGAGGCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RLILPAPQAPAFDPA*VLRAPLHGLRGSRP
Trigger: GGGCCTGGAGCCTCGAAGGCCATGCAGTGGAGCTCTGAGGACCCAAGCAGGGTCAAATGCAGGGGCTTGTGGAGCTGGTAATATCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461445.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCACCGCGGGACTCACTaGAGTAGCGACAGCACCGGC +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSHRGTH*SSDSTG
Trigger: GCCGGTGCTGTCGCTACTCAAGTGAGTCCCGCGGTG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334661.5
CDS-3UTR CAA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGATGAGGAAGCCGTCCTaGGTCATCTGCCGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGMRKPS*VICRCA
Trigger: GGCGCAGCGGCAGATGACCAAGGACGGCTTCCTCAT...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGATCTTCCCCTTCAGTaGCTCAGGGGAGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPDLPLQ*LRGGQA
Trigger: AGCCTGCCCTCCCCTGAGCAACTGAAGGGGAAGATC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGGGTTAAAGGTGCCGTaGGGGTCTCGCAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAGLKVP*GSRRKA
Trigger: CGCCTTCCTGCGAGACCCCAACGGCACCTTTAACCC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS CCA 90 bp TGGGCATCAGCTGGCGATGGGGCGATGAGGTCTAGTGTATTGCGCTaGTCCTTGAAGACAATGGAGAAGCAGCGGTCCTCGGGCACATCA +
Preference number: 5 (lower is better)
Translates to: WASAGDGAMRSSVLR*SLKTMEKQRSSGTS
Trigger: TGATGTGCCCGAGGACCGCTGCTTCTCCATTGTCTTCAAGGACCAGCGCAATACACTAGACCTCATCGCCCCATCGCCAGCTGATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGGGGTCCGCATGACCTaGCGGGACTCCTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLGVRMT*RDSCQM
Trigger: CATCTGGCAGGAGTCCCGCAAGGTCATGCGGACCCC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGGAGTGGTGGATGATCTaGTGCAGCCCCAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGEWWMI*CSPSTQ
Trigger: CTGGGTGCTGGGGCTGCACAAGATCATCCACCACTC...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGGGGGAGGGCAGGCTGTaGGTGACCCCATCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLGEGRL*VTPSSG
Trigger: ACCACTGGATGGGGTCACCAACAGCCTGCCCTCCCC...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGATCTTCCCCTTCAGTaGCTCAGGGGAGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWDLPLQ*LRGGQA
Trigger: AGCCTGCCCTCCCCTGAGCAACTGAAGGGGAAGATC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGCTGAGCTTGTCCTCCTaGGGCTTGTGCTGCACACGG +
Preference number: 5 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGLSLSS*GLCCTR
Trigger: CCGTGTGCAGCACAAGCCCAAGGAGGACAAGCTCAG...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCAGAAATGACCCTGATGTaGAGCCGCTTCCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPEMTLM*SRFRAH
Trigger: GTGGGCACGGAAGCGGCTCAACATCAGGGTCATTTC...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS TCA 90 bp TCCTCCAGCCTAGTCCTGGAGGGAGATCTTCACAAAGAGGGTGGCTaGTGGATGCTGGTCCCCGTTCTTAGACATGAGGTGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: SSSLVLEGDLHKEGG*WMLVPVLRHEVDMA
Trigger: CGCCATGTCCACCTCATGTCTAAGAACGGGGACCAGCATCCATCAGCCACCCTCTTTGTGAAGATCTCCCTCCAGGACTAGGCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000417185.6
ENST00000461445.5
ENST00000463876.5
CDS GCA 90 bp GGCTGTAGTTGGAGGAGTCTGTTCTCCATCCAGCCGGGTAGATTCTaGTCAGGTGCCCCACGTTGTGGCGGACAAAGCCGTTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: GCSWRSLFSIQPGRF*SGAPRCGGQSRFLI
Trigger: AATCAGGAAACGGCTTTGTCCGCCACAACGTGGGGCACCTGAGCAGAATCTACCCGGCTGGATGGAGAACAGACTCCTCCAACTACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000484829.5
ENST00000495367.1
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCCTGCCAGATGGTCTaGCAGTCCTCCTGCAACTTG +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSCQMV*QSSCNL
Trigger: CAAGTTGCAGGAGGACTGCAAGACCATCTGGCAGGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGGGGTCCGCATGACCTaGCGGGACTCCTGCCAGATG +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGGVRMT*RDSCQM
Trigger: CATCTGGCAGGAGTCCCGCAAGGTCATGCGGACCCC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGAGTGGTGGATGATCTaGTGCAGCCCCAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSEWWMI*CSPSTQ
Trigger: CTGGGTGCTGGGGCTGCACAAGATCATCCACCACTC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGGGGAGGGCAGGCTGTaGGTGACCCCATCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGGEGRL*VTPSSG
Trigger: ACCACTGGATGGGGTCACCAACAGCCTGCCCTCCCC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGTGTGCTAGCCTGAGCTaGTCCTCCTTGGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWCASLS*SSLGLC
Trigger: GCACAAGCCCAAGGAGGACAAGCTCAGGCTAGCACA...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GGAGAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGAAATGACCCTGATGTaGAGCCGCTTCCGTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GEGCSVIPNGMKDSSRDWEMTLM*SRFRAH
Trigger: GTGGGCACGGAAGCGGCTCAACATCAGGGTCATTTC...CCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS TCA 90 bp CAGGCACAACTACCTCAAACGCAAACTCCGTGTCCCACCATGGGTTaGAACCTAGGGGGACAGGCACCATATCAGCAGCATGGACACCAG +
Preference number: 5 (lower is better)
Translates to: QAQLPQTQTPCPTMG*NLGGQAPYQQHGHQ
Trigger: CTGGTGTCCATGCTGCTGATATGGTGCCTGTCCCCCTAGGTTTCAACCCATGGTGGGACACGGAGTTTGCGTTTGAGGTAGTTGTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417185.6
CDS CCA 90 bp GTGATGACAGCAGTCTGGCGGCTGGCCACGTCCCGGCTCACGCCATaGATCTCCACTGTCACTTTGGGGTCCACAATTGAATTCTTATTC +
Preference number: 5 (lower is better)
Translates to: VMTAVWRLATSRLTP*ISTVTLGSTIEFLF
Trigger: GAATAAGAATTCAATTGTGGACCCCAAAGTGACAGTGGAGATCCATGGCGTGAGCCGGGACGTGGCCAGCCGCCAGACTGCTGTCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000417185.6
ENST00000461445.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATCGTCCACCTGGATGTaGAGCTCCTTCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPSSTWM*SSFRKF
Trigger: GAACTTCCTGAAGGAGCTCAACATCCAGGTGGACGA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCTCAGGTGCCCCACGTaGTGGCGGACAAAGCCGTTT +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLLRCPT*WRTKPF
Trigger: AAACGGCTTTGTCCGCCACAACGTGGGGCACCTGAG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGGGTTAAAGGTGCCGTaGGGGTCTCGCAGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGGLKVP*GSRRKA
Trigger: CGCCTTCCTGCGAGACCCCAACGGCACCTTTAACCC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTCCTGCCAGATGGTCTaGCAGTCCTCCTGCAACTTG +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSSCQMV*QSSCNL
Trigger: CAAGTTGCAGGAGGACTGCAAGACCATCTGGCAGGA...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGATGATTGGTTCCTGGTaGGGCCCGTCCCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLMIGSW*GPSQQS
Trigger: TGACTGCTGGGACGGGCCCAACCAGGAACCAATCAT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGAGCTTGTCCTCCTaGGGCTTGTGCTGCACACGG +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGLSLSS*GLCCTR
Trigger: CCGTGTGCAGCACAAGCCCAAGGAGGACAAGCTCAG...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGACATGGCGGTATCCTaGCTTGAGGCTGTTCAAGGG +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSDMAVS*LEAVQG
Trigger: CCCTTGAACAGCCTCAAGCAAGGATACCGCCATGTC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS TCA 90 bp AGATATTTCCAGACTGATATTACCAGCTCCACAAGCCCCTGCATTTaGCCCTGCTTGGGTCCTCAGAGCTCCACTGCATGGCCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: RYFQTDITSSTSPCI*PCLGPQSSTAWPSR
Trigger: CCTCGAAGGCCATGCAGTGGAGCTCTGAGGACCCAAGCAGGGTCAAATGCAGGGGCTTGTGGAGCTGGTAATATCAGTCTGGAAATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461445.5
CDS-3UTR CAA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGTATTGCGCTGGTCCTaGAAGACAATGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAVLRWS*KTMEKQ
Trigger: CTGCTTCTCCATTGTCTTCAAGGACCAGCGCAATAC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGATGATTGGTTCCTGGTaGGGCCCGTCCCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGMIGSW*GPSQQS
Trigger: TGACTGCTGGGACGGGCCCAACCAGGAACCAATCAT...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGTGTGCTAGCCTGAGCTaGTCCTCCTTGGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGCASLS*SSLGLC
Trigger: GCACAAGCCCAAGGAGGACAAGCTCAGGCTAGCACA...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTGGGTTGAAACCATTGTaGGTGATGACAGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAGLKPL*VMTAVW
Trigger: CCAGACTGCTGTCATCACCAACAATGGTTTCAACCC...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ACTATGTTAGGGCTGAAGGCAATTTGGGGGCCTAGCTCTGAGCAAGAGGCTGGGGTGTCCCACCATGGGTaGAAACCATTGTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: TMLGLKAIWGPSSEQEAGVSHHG*KPLLVM
Trigger: CATCACCAACAATGGTTTCAACCCATGGTGGGACAC...CCCAGCCTCTTGCTCAGAGCTAGGCCCCCAAATTGCCTTCAGCCCTAACATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGTGGCGGTATCCTTGCTaGAGGCTGTTCAAGGGGATG +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLWRYPC*RLFKGM
Trigger: CATCCCCTTGAACAGCCTCAAGCAAGGATACCGCCA...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGTATTGCGCTGGTCCTaGAAGACAATGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSVLRWS*KTMEKQ
Trigger: CTGCTTCTCCATTGTCTTCAAGGACCAGCGCAATAC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GAGGGCTGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTATGAGGTCTAGTGTATaGCGCTGGTCCTTGAAGACA +
Preference number: 5 (lower is better)
Translates to: EGCSVIPNGMKDSSRDWAMRSSV*RWSLKT
Trigger: TGTCTTCAAGGACCAGCGCAATACACTAGACCTCAT...AGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCAGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGTCGTCCACCTGGATGTaGAGCTCCTTCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLSSTWM*SSFRKF
Trigger: GAACTTCCTGAAGGAGCTCAACATCCAGGTGGACGA...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCGGGTTGAAACCATTGTaGGTGATGACAGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSGLKPL*VMTAVW
Trigger: CCAGACTGCTGTCATCACCAACAATGGTTTCAACCC...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGGACATGGCGGTATCCTaGCTTGAGGCTGTTCAAGGG +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGDMAVS*LEAVQG
Trigger: CCCTTGAACAGCCTCAAGCAAGGATACCGCCATGTC...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCATTGTTGTCCTTGTTTTaGTCAGCTTTTCGCAAGCAG +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPLLSLF*SAFRKQ
Trigger: CTGCTTGCGAAAAGCTGACAAAAACAAGGACAACAA...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCTGGTCCCCACTCATCTTGTTGTCCTaGTTTTTGTCAGCTTTTCGC +
Preference number: 5 (lower is better)
Translates to: IPNGMKDSSRDWASSWSPLILLS*FLSAFR
Trigger: GCGAAAAGCTGACAAAAACAAGGACAACAAGATGAG...TGGGGACCAGGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCCATGGGTTGAAACCATaGTTGGTGATGACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSHGLKP*LVMTAV
Trigger: GACTGCTGTCATCACCAACAATGGTTTCAACCCATG...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGATGAGGTCTAGTGTATaGCGCTGGTCCTTGAAGACA +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLMRSSV*RWSLKT
Trigger: TGTCTTCAAGGACCAGCGCAATACACTAGACCTCAT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp TGCAGTGTTATTCCTAACGGAATGAAGGACAGCTCCAGGGACTGGGCTAGCTCCATCTCCACTGTCACTTaGGGGTCCACAATTGAATTC +
Preference number: 5 (lower is better)
Translates to: CSVIPNGMKDSSRDWASSISTVT*GSTIEF
Trigger: GAATTCAATTGTGGACCCCAAAGTGACAGTGGAGAT...GGAGCTAGCCCAGTCCCTGGAGCTGTCCTTCATTCCGTTAGGAATAACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCATGGGTTGAAACCATaGTTGGTGATGACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLHGLKP*LVMTAV
Trigger: GACTGCTGTCATCACCAACAATGGTTTCAACCCATG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGCTCATCTTGTTGTCCTaGTTTTTGTCAGCTTTTCGC +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLLILLS*FLSAFR
Trigger: GCGAAAAGCTGACAAAAACAAGGACAACAAGATGAG...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp ATCGTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGTTGTTGTCCTTGTTTTaGTCAGCTTTTCGCAAGCAG +
Preference number: 5 (lower is better)
Translates to: IVIFIKILDHSLAGGWRGLLSLF*SAFRKQ
Trigger: CTGCTTGCGAAAAGCTGACAAAAACAAGGACAACAA...CCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS-3UTR CAA 90 bp GTGATTTTTATAAAAATCCTTGACCACTCGCTGGCCGGAGGGTGGAGAGGGCTGATTGAATTCTTATTCTaGTTGACTTTTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VIFIKILDHSLAGGWRGLIEFLF*LTFGSC
Trigger: GCAGCTGCCAAAAGTCAACAAGAATAAGAATTCAAT...CAGCCCTCTCCACCCTCCGGCCAGCGAGTGGTCAAGGATTTTTATAAAAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334661.5
ENST00000463876.5
CDS TCA 72 bp CTGATGTTGAGCCGCTTCCGTGCCCACCAGGGCCCCTaGGCCAGGGCGCGGGGGTTAAAGGTGCCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: LMLSRFRAHQGP*ARARGLKVPLG
Trigger: CCCCAACGGCACCTTTAACCCCCGCGCCCTGGCTCAGGGGCCCTGGTGGGCACGGAAGCGGCTCAACATCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000495395.1
CDS GCA 72 bp GTAGCGCTCAATGAGGGAGAGGGCCAGCGCAGGCCCTaGCGCCTCCTCCCGCTGCTGGTGCTGCAGGAACGT +
Preference number: 6 (lower is better)
Translates to: VALNEGEGQRRP*RLLPLLVLQER
Trigger: ACGTTCCTGCAGCACCAGCAGCGGGAGGAGGCGGCAGGGCCTGCGCTGGCCCTCTCCCTCATTGAGCGCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CAA 72 bp CGGAGTGCTCTGCGCCCCTTACCCAGCCTCCGTCCATaGAGCGCCGCCACCTTAAGGCTCCGCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RSALRPLPSLRP*SAATLRLRSCR
Trigger: CCTGCAGGAGCGGAGCCTTAAGGTGGCGGCGCTCAATGGACGGAGGCTGGGTAAGGGGCGCAGAGCACTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS GCA 72 bp ACAGAGTCTCCCCTGAGCCCGCGGCCTCGGCGAAGGTaGGGTCGATCTCCACCCGCTGGGTCAGCATCTTGT +
Preference number: 6 (lower is better)
Translates to: TESPLSPRPRRR*GRSPPAGSASC
Trigger: ACAAGATGCTGACCCAGCGGGTGGAGATCGACCGCACCTTCGCCGAGGCCGCGGGCTCAGGGGAGACTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS TCA 72 bp TCCTCCCGCTGCTGGTGCTGCAGGAACGTCACTAACTaGTCCACCGACAGAGTCTCCCCTGAGCCCGCGGCC +
Preference number: 6 (lower is better)
Translates to: SSRCWCCRNVTN*STDRVSPEPAA
Trigger: GGCCGCGGGCTCAGGGGAGACTCTGTCGGTGGATCAGTTAGTGACGTTCCTGCAGCACCAGCAGCGGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS GCA 72 bp GGCAGCCTTTGCACAGTGCCCGGATGTAGGCTTCAGTaGTGCTGGGCCCGGCTAGCTGGTCCTCCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: GSLCTVPGCRLQ*CWARLAGPPAG
Trigger: ACCTGCTGGAGGACCAGCTAGCCGGGCCCAGCAGCACTGAAGCCTACATCCGGGCACTGTGCAAAGGCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000484829.5
CDS CCA 72 bp CATCCAGTGGTCGGTTCAACAGCATGGGGCCCAGGATaGCATGCAGGTGCCGCGCCATCACGCGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: HPVVGSTAWGPG*HAGAAPSRAAA
Trigger: AGCAGCAGCGCGTGATGGCGCGGCACCTGCATGCCATCCTGGGCCCCATGCTGTTGAACCGACCACTGGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000484829.5
CDS CCA 72 bp GGCAGGACAGAGCAGTCACAGGCTGTGGGCTGGCCCTaGGGCCCTAGAGCACAGCCTGCTCAGGGTACACTA +
Preference number: 6 (lower is better)
Translates to: GRTEQSQAVGWP*GPRAQPAQGTL
Trigger: TAGTGTACCCTGAGCAGGCTGTGCTCTAGGGCCCCAGGGCCAGCCCACAGCCTGTGACTGCTCTGTCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461445.5
ENST00000495395.1
CDS TCA 72 bp TCCAGACCCTCCGTGCGGTGCCCCATTCGCACCTCCTaGATGTCCTCGATGGAGAACAGCTGGGACTCCGGG +
Preference number: 6 (lower is better)
Translates to: SRPSVRCPIRTS*MSSMENSWDSG
Trigger: CCCGGAGTCCCAGCTGTTCTCCATCGAGGACATTCAGGAGGTGCGAATGGGGCACCGCACGGAGGGTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS TCA 72 bp TGCCTCATCCTCCATCTCAGCAGCCTCGTCTTCGTCTaGCACCACAGTGGCCTCAGGGCCACCCTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: CLILHLSSLVFV*HHSGLRATLPS
Trigger: GGAGGGGAGGGTGGCCCTGAGGCCACTGTGGTGTCAGACGAAGACGAGGCTGCTGAGATGGAGGATGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000484829.5
ENST00000495367.1
CDS GCA 72 bp AGCCTTTGCACAGTGCCCGGATGTAGGCTTCAGTGCTaGTGGGCCCGGCTAGCTGGTCCTCCAGCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: SLCTVPGCRLQC*WARLAGPPAGR
Trigger: CCTACCTGCTGGAGGACCAGCTAGCCGGGCCCAGCAGCACTGAAGCCTACATCCGGGCACTGTGCAAAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000484829.5
CDS GCA 72 bp TCCAGCTGCCTTCCCATTCCCCCGCAGATCTCGGAGTaGTCTGCGCCCCTTACCCAGCCTCCGTCCATTGAG +
Preference number: 6 (lower is better)
Translates to: SSCLPIPPQISE*SAPLTQPPSIE
Trigger: CTCAATGGACGGAGGCTGGGTAAGGGGCGCAGAGCACTCCGAGATCTGCGGGGGAATGGGAAGGCAGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS GCA 72 bp AATGGCCCCGCGTTAAGGGACAAGTGGTCGGCGTCCTaGTCCAGCTGCCTTCCCATTCCCCCGCAGATCTCG +
Preference number: 6 (lower is better)
Translates to: NGPALRDKWSAS*SSCLPIPPQIS
Trigger: CGAGATCTGCGGGGGAATGGGAAGGCAGCTGGAGCAGGACGCCGACCACTTGTCCCTTAACGCGGGGCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS CCA 72 bp GCCCAGCACCTACCATTGTTGGTGATGACAGCAGTCTaGCGGCTGGCCACGTCCCGGCTCACGCCATGGATC +
Preference number: 6 (lower is better)
Translates to: AQHLPLLVMTAV*RLATSRLTPWI
Trigger: GATCCATGGCGTGAGCCGGGACGTGGCCAGCCGCCAGACTGCTGTCATCACCAACAATGGTAGGTGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417185.6
CDS CCA 72 bp GGCTCCAAGGCAAATGGCCCCGCGTTAAGGGACAAGTaGTCGGCGTCCTGCTCCAGCTGCCTTCCCATTCCC +
Preference number: 6 (lower is better)
Translates to: GSKANGPALRDK*SASCSSCLPIP
Trigger: GGGAATGGGAAGGCAGCTGGAGCAGGACGCCGACCACTTGTCCCTTAACGCGGGGCCATTTGCCTTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS TCA 72 bp CCTCGATGGAGAACAGCTGGGACTCCGGGGTCCGCATaGCCTTGCGGGACTCCTGCCAGATGGTCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: PRWRTAGTPGSA*PCGTPARWSCS
Trigger: ACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGTCATGCGGACCCCGGAGTCCCAGCTGTTCTCCATCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS TCA 72 bp TCCAGACCCTCCGTGCGGTGCCCCATTCGCACCTCCTaGATGTCCTCGATGGAGACTTCAGCCCCTCCACTG +
Preference number: 6 (lower is better)
Translates to: SRPSVRCPIRTS*MSSMETSAPPL
Trigger: CAGTGGAGGGGCTGAAGTCTCCATCGAGGACATTCAGGAGGTGCGAATGGGGCACCGCACGGAGGGTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479619.1
CDS GCA 72 bp GCGTTAAGGGACAAGTGGTCGGCGTCCTGCTCCAGCTaGCTTCCCATTCCCCCGCAGATCTCGGAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: ALRDKWSASCSS*LPIPPQISECS
Trigger: AGAGCACTCCGAGATCTGCGGGGGAATGGGAAGGCAGCTGGAGCAGGACGCCGACCACTTGTCCCTTAACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473834.1
CDS CCA 72 bp CGGCCCTGGTACACGTCCATCTCTGGCCCAGGTGTCTaGAAATTCAGGGCCACGATCTGGCAGCCCCCATTC +
Preference number: 6 (lower is better)
Translates to: RPWYTSISGPGV*KFRATIWQPPF
Trigger: GAATGGGGGCTGCCAGATCGTGGCCCTGAATTTCCAGACACCTGGGCCAGAGATGGACGTGTACCAGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000463876.5
ENST00000484829.5
ENST00000495367.1
CDS CCA 72 bp ACGTACCCACAGGCCCCGTTGTCCTGGAAGCGGCCCTaGTACACGTCCATCTCTGGCCCAGGTGTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: TYPQAPLSWKRP*YTSISGPGVWK
Trigger: TTTCCAGACACCTGGGCCAGAGATGGACGTGTACCAGGGCCGCTTCCAGGACAACGGGGCCTGTGGGTACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000484829.5
ENST00000495395.1
CDS CAA 72 bp ATGGAGAACAGCTGGGACTCCGGGGTCCGCATGACCTaGCGGGACTCCTGCCAGATGGTCTTGCAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: MENSWDSGVRMT*RDSCQMVLQSS
Trigger: GGAGGACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGTCATGCGGACCCCGGAGTCCCAGCTGTTCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CAA 72 bp AGATCCTCATCATCCTGTAGGCCCAGCCTCCGTCCATaGAGCGCCGCCACCTTAAGGCTCCGCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RSSSSCRPSLRP*SAATLRLRSCR
Trigger: CCTGCAGGAGCGGAGCCTTAAGGTGGCGGCGCTCAATGGACGGAGGCTGGGCCTACAGGATGATGAGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463876.5
CDS TCA 72 bp GCTTCTGACGCTGGTCCATGGAGCCTGAGTGGTGGATaGTCTTGTGCAGCCCCAGCACCCAGTGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: ASDAGPWSLSGG*SCAAPAPSAGH
Trigger: ATGCCCAGCACTGGGTGCTGGGGCTGCACAAGATCATCCACCACTCAGGCTCCATGGACCAGCGTCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS CCA 72 bp GCAGTCTGGCGGCTGGCCACGTCCCGGCTCACGCCATaGATCTCCACTGTCACTTTGGGGTCCACAATTGAA +
Preference number: 6 (lower is better)
Translates to: AVWRLATSRLTP*ISTVTLGSTIE
Trigger: TTCAATTGTGGACCCCAAAGTGACAGTGGAGATCCATGGCGTGAGCCGGGACGTGGCCAGCCGCCAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000417185.6
ENST00000461445.5
ENST00000463876.5
CDS CAA 72 bp CCGTCAGCCGACAGTAAGTACATGAGGAAGCCGTCCTaGGTCATCTGCCGCTGCGCCTTGGCAGTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: PSADSKYMRKPS*VICRCALAVSL
Trigger: CAGCGAGACTGCCAAGGCGCAGCGGCAGATGACCAAGGACGGCTTCCTCATGTACTTACTGTCGGCTGACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CAA 90 bp ATGTCCTCGATGGAGAACAGCTGGGACTCCGGGGTCCGCATGACCTaGCGGGACTCCTGCCAGATGGTCTTGCAGTCCTCCTGCAACTTG +
Preference number: 6 (lower is better)
Translates to: MSSMENSWDSGVRMT*RDSCQMVLQSSCNL
Trigger: CAAGTTGCAGGAGGACTGCAAGACCATCTGGCAGGAGTCCCGCAAGGTCATGCGGACCCCGGAGTCCCAGCTGTTCTCCATCGAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CAA 90 bp CAGTGCTGGGCATCAGCTGGCGATGGGGCGATGAGGTCTAGTGTATaGCGCTGGTCCTTGAAGACAATGGAGAAGCAGCGGTCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: QCWASAGDGAMRSSV*RWSLKTMEKQRSSG
Trigger: GCCCGAGGACCGCTGCTTCTCCATTGTCTTCAAGGACCAGCGCAATACACTAGACCTCATCGCCCCATCGCCAGCTGATGCCCAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS CCA 72 bp CATGGGTTGAAACCATTGTTGGTGATGACAGCAGTCTaGCGGCTGGCCACGTCCCGGCTCACGCCATGGATC +
Preference number: 6 (lower is better)
Translates to: HGLKPLLVMTAV*RLATSRLTPWI
Trigger: GATCCATGGCGTGAGCCGGGACGTGGCCAGCCGCCAGACTGCTGTCATCACCAACAATGGTTTCAACCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CCA 72 bp CCTGCAACTTGTAGAAGCGCTCTCTCCTCCATGAGCTaGACTTCACCTTCAGGAGCTGGCTGCCCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: PATCRSALSSMS*TSPSGAGCPSA
Trigger: TGCTGAAGGGCAGCCAGCTCCTGAAGGTGAAGTCCAGCTCATGGAGGAGAGAGCGCTTCTACAAGTTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000473834.1
CDS CAA 72 bp GCATCAGCTGGCGATGGGGCGATGAGGTCTAGTGTATaGCGCTGGTCCTTGAAGACAATGGAGAAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: ASAGDGAMRSSV*RWSLKTMEKQR
Trigger: CCGCTGCTTCTCCATTGTCTTCAAGGACCAGCGCAATACACTAGACCTCATCGCCCCATCGCCAGCTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
ENST00000479619.1
CDS TCA 72 bp CAGACTGATATTACCAGCTCCACAAGCCCCTGCATTTaGCCCTGCTTGGGTCCTCAGAGCTCCACTGCATGG +
Preference number: 6 (lower is better)
Translates to: QTDITSSTSPCI*PCLGPQSSTAW
Trigger: CCATGCAGTGGAGCTCTGAGGACCCAAGCAGGGTCAAATGCAGGGGCTTGTGGAGCTGGTAATATCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461445.5
CDS CCA 72 bp AGGGAGATCTTCACAAAGAGGGTGGCTGATGGATGCTaGTCCCCGTTCTTAGACATGAGGTGGACATGGCGG +
Preference number: 6 (lower is better)
Translates to: REIFTKRVADGC*SPFLDMRWTWR
Trigger: CCGCCATGTCCACCTCATGTCTAAGAACGGGGACCAGCATCCATCAGCCACCCTCTTTGTGAAGATCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000417185.6
ENST00000461445.5
ENST00000463876.5
CDS CAA 90 bp TCAGGCACAACTACCTCAAACGCAAACTCCGTGTCCCACCATGGGTaGAAACCTAGGGGGACAGGCACCATATCAGCAGCATGGACACCA +
Preference number: 6 (lower is better)
Translates to: SGTTTSNANSVSHHG*KPRGTGTISAAWTP
Trigger: TGGTGTCCATGCTGCTGATATGGTGCCTGTCCCCCTAGGTTTCAACCCATGGTGGGACACGGAGTTTGCGTTTGAGGTAGTTGTGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417185.6
CDS TCA 72 bp CTAGTCCTGGAGGGAGATCTTCACAAAGAGGGTGGCTaGTGGATGCTGGTCCCCGTTCTTAGACATGAGGTG +
Preference number: 6 (lower is better)
Translates to: LVLEGDLHKEGG*WMLVPVLRHEV
Trigger: CACCTCATGTCTAAGAACGGGGACCAGCATCCATCAGCCACCCTCTTTGTGAAGATCTCCCTCCAGGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000417185.6
ENST00000461445.5
ENST00000463876.5
CDS TCA 72 bp CTACCTCAAACGCAAACTCCGTGTCCCACCATGGGTTaGAACCTAGGGGGACAGGCACCATATCAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: LPQTQTPCPTMG*NLGGQAPYQQH
Trigger: ATGCTGCTGATATGGTGCCTGTCCCCCTAGGTTTCAACCCATGGTGGGACACGGAGTTTGCGTTTGAGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417185.6
CDS GCA 72 bp TGGAGGGAGATCTTCACAAAGAGGGTGGCTGATGGATaGTGGTCCCCGTTCTTAGACATGAGGTGGACATGG +
Preference number: 6 (lower is better)
Translates to: WREIFTKRVADG*WSPFLDMRWTW
Trigger: CCATGTCCACCTCATGTCTAAGAACGGGGACCAGCATCCATCAGCCACCCTCTTTGTGAAGATCTCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000417185.6
ENST00000461445.5
ENST00000463876.5
CDS CCA 72 bp GCTGATGGATGCTGGTCCCCGTTCTTAGACATGAGGTaGACATGGCGGTATCCTTGCTTGAGGCTGTTCAAG +
Preference number: 6 (lower is better)
Translates to: ADGCWSPFLDMR*TWRYPCLRLFK
Trigger: CTTGAACAGCCTCAAGCAAGGATACCGCCATGTCCACCTCATGTCTAAGAACGGGGACCAGCATCCATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334661.5
ENST00000417185.6
ENST00000461445.5
ENST00000463876.5
CDS CAA 72 bp ACTACCTCAAACGCAAACTCCGTGTCCCACCATGGGTaGAAACCTAGGGGGACAGGCACCATATCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: TTSNANSVSHHG*KPRGTGTISAA
Trigger: TGCTGCTGATATGGTGCCTGTCCCCCTAGGTTTCAACCCATGGTGGGACACGGAGTTTGCGTTTGAGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417185.6
CDS CAA 90 bp CGGCTGGCCACGTCCCGGCTCACGCCATGGATCTCCACTGTCACTTaGGGGTCCACAATTGAATTCTTATTCTTGTTGACTTTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RLATSRLTPWISTVT*GSTIEFLFLLTFGS
Trigger: GCTGCCAAAAGTCAACAAGAATAAGAATTCAATTGTGGACCCCAAAGTGACAGTGGAGATCCATGGCGTGAGCCGGGACGTGGCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CAA 72 bp ACGTCCCGGCTCACGCCATGGATCTCCACTGTCACTTaGGGGTCCACAATTGAATTCTTATTCTTGTTGACT +
Preference number: 6 (lower is better)
Translates to: TSRLTPWISTVT*GSTIEFLFLLT
Trigger: AGTCAACAAGAATAAGAATTCAATTGTGGACCCCAAAGTGACAGTGGAGATCCATGGCGTGAGCCGGGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334661.5
ENST00000461445.5
ENST00000463876.5
CDS CCA 72 bp TGTGCTAATGAGGTTTCAGACACTGTGACATGCTGGTaGGCAGATATTTCCAGACTGATATTACCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: CANEVSDTVTCW*ADISRLILPAP
Trigger: TGGAGCTGGTAATATCAGTCTGGAAATATCTGCCCACCAGCATGTCACAGTGTCTGAAACCTCATTAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461445.5