RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000101333

Ensembl transcript IDs: ENST00000278655.8, ENST00000378473.9, ENST00000378493.5, ENST00000378501.2, ENST00000407043.6, ENST00000414679.6, ENST00000416836.5, ENST00000437503.5, ENST00000441846.5, ENST00000464199.5, ENST00000473151.5, ENST00000482123.1, ENST00000492632.5

Found 942 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTAGACTACCGGGTTTCCATGCGCTCCTCTTGGCTTTGGTGGCATaGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAAC +
Preference number: 1 (lower is better)
Translates to: SRLPGFHALLLALVA*LNSQRNTFSCTVCN
Trigger: GTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATaGACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAG +
Preference number: 1 (lower is better)
Translates to: LALVAWLNSQRNTFS*TVCNSTTAGLKTMQ
Trigger: CTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR GCA 90 bp GTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTaGAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACT +
Preference number: 1 (lower is better)
Translates to: VAWLNSQRNTFSCTV*NSTTAGLKTMQINT
Trigger: AGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR TCA 90 bp CATATACAACAATTCATCTGGTGCTGTGCCCTAAAATCAGTAATCTaGTTAGTTCTAGACTACCGGGTTTCCATGCGCTCCTCTTGGCTT +
Preference number: 1 (lower is better)
Translates to: HIQQFIWCCALKSVI*LVLDYRVSMRSSWL
Trigger: AAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCACAGCACCAGATGAATTGTTGTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR TCA 90 bp CAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTTCAGTTTGC +
Preference number: 1 (lower is better)
Translates to: QNKQLSSMEFVFRSL*VSLLMLCGFAASVC
Trigger: GCAAACTGAAGCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278655.8
ENST00000378493.5
ENST00000414679.6
3UTR GCA 90 bp CAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGCTGTaGCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTC +
Preference number: 1 (lower is better)
Translates to: QNQFLQAYTTIHLVL*PKISNLISSRLPGF
Trigger: GAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCACAGCACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR CAA 90 bp CTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCTCTTGGCTTaGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACT +
Preference number: 2 (lower is better)
Translates to: LISSRLPGFHALLLA*VAWLNSQRNTFSCT
Trigger: AGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR CAA 90 bp AGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCTCTaGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCA +
Preference number: 2 (lower is better)
Translates to: SNLISSRLPGFHALL*ALVAWLNSQRNTFS
Trigger: TGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGCGCTCCTCTTGGCTTTaGTGGCATGGCTCAATTCCC +
Preference number: 2 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRRSSWL*WHGSIP
Trigger: GGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCG...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTCTTTTCCTAGTGCATaGACTTGCTATGAAATTGCT +
Preference number: 2 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVSFPSA*TCYEIA
Trigger: AGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCACTACCGGGTTTCCATaGGCTCCTCTTGGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: NIDGIIIFSALFRGTHRITTGFP*APLGFG
Trigger: ACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGT...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAACTACCGGGTTTCCATaGGCTCCTCTTGGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLTTGFP*APLGFG
Trigger: ACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGT...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCATTCCAAGTCTCTCTaGTTTCAGATATCATCTTGT +
Preference number: 2 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSHSKSL*FQISSC
Trigger: ACAAGATGATATCTGAAACCAGAGAGACTTGGAATG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR TCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGGGAGCAAATACTCTTaGCGAGTGTTATGCGTGTTT +
Preference number: 2 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRGSKYS*RVLCVF
Trigger: AAACACGCATAACACTCGTCAAGAGTATTTGCTCCC...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTCAATGGTTGGACTCTaGCTTACTGGAATAGTAAAT +
Preference number: 2 (lower is better)
Translates to: CPKISNLISSRLPGFHALSMVGL*LTGIVN
Trigger: ATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATCCTAGTGCATGCACTTaGTATGAAATTGCTAATGCA +
Preference number: 2 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADPSACT*YEIANA
Trigger: TGCATTAGCAATTTCATAGCAAGTGCATGCACTAGG...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCAACAATTCATCTGGTaGTGTGCCCTAAAATCAGTA +
Preference number: 2 (lower is better)
Translates to: HLLECVLGANTLDECYACQQFIW*CALKSV
Trigger: TACTGATTTTAGGGCACAGCACCAGATGAATTGTTG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTT +
Preference number: 2 (lower is better)
Translates to: CNSTTAGLKTMQINTVANDALWV*CFSLHF
Trigger: AAAATGCAAACTGAAGCAGCAAACCCACAAAGCATC...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378493.5
3UTR-3UTR GCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATCCTAGTGCATGCACTTaGTATGAAATTGCTAATGCA +
Preference number: 2 (lower is better)
Translates to: CNSTTAGLKTMQINTVANPSACT*YEIANA
Trigger: TGCATTAGCAATTTCATAGCAAGTGCATGCACTAGG...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTCTTTTCCTAGTGCATaGACTTGCTATGAAATTGCT +
Preference number: 2 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADSFPSA*TCYEIA
Trigger: AGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADNSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGNSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTGTATTATCAATGGTTaGACTCTGCCTTACTGGAAT +
Preference number: 2 (lower is better)
Translates to: HLLECVLGANTLDECYACCIING*TLPYWN
Trigger: ATTCCAGTAAGGCAGAGTCCAACCATTGATAATACA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTGTATTATCAATGGTTaGACTCTGCCTTACTGGAAT +
Preference number: 2 (lower is better)
Translates to: VQTCPKASQRRVVHTKLICIING*TLPYWN
Trigger: ATTCCAGTAAGGCAGAGTCCAACCATTGATAATACA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR CCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATAGTAATGATGAGTTTTaGCACACATACACTGCTCTA +
Preference number: 2 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADSNDEF*HTYTAL
Trigger: TAGAGCAGTGTATGTGTGCCAAAACTCATCATTACT...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTAGTAATGATGAGTTTTaGCACACATACACTGCTCTA +
Preference number: 2 (lower is better)
Translates to: HLLECVLGANTLDECYACSNDEF*HTYTAL
Trigger: TAGAGCAGTGTATGTGTGCCAAAACTCATCATTACT...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTGGATTAGTCTTTATTaGTGCTTGTGTATCATGCAA +
Preference number: 2 (lower is better)
Translates to: HLLECVLGANTLDECYACWISLY*CLCIMQ
Trigger: TTGCATGATACACAAGCACCAATAAAGACTAATCCA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR TCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR TCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR TCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 2 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR TCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAAACACAGTTCTCCTTTaGGTAATGATGAGTTTTGGC +
Preference number: 2 (lower is better)
Translates to: SILMVSSFSPLCSEEHTENTVLL*VMMSFG
Trigger: GCCAAAACTCATCATTACTCAAAGGAGAACTGTGTT...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR TCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGCTAAAATCAGTAATCTaGTTAGTTCTAGACTACCGG +
Preference number: 2 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRLKSVI*LVLDYR
Trigger: CCGGTAGTCTAGAACTAATCAGATTACTGATTTTAG...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATGGTGCTTGTGTATCATaGAAACATAGTTCTAGTATT +
Preference number: 2 (lower is better)
Translates to: CNSTTAGLKTMQINTVANGACVS*KHSSSI
Trigger: AATACTAGAACTATGTTTGCATGATACACAAGCACC...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRNSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR CAA 90 bp GAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTTCAGATATCATCTaGTTTACACATAAAGGAAACAAAATAAACAGCTTTCATCCATGG +
Preference number: 2 (lower is better)
Translates to: EVSQTFQVSLVSDII*FTHKGNKINSFHPW
Trigger: CCATGGATGAAAGCTGTTTATTTTGTTTCCTTTATGTGTAAACAAGATGATATCTGAAACCAGAGAGACTTGGAATGTCTGACTGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGTGGCAATACTTAGATaGTTTTGCTCTCTAACAGTG +
Preference number: 2 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVVAILR*FCSLTV
Trigger: CACTGTTAGAGAGCAAAATCATCTAAGTATTGCCAC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR TCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTTTCAAACTAGAACTTaGAGTATCAAGAATGCCCAC +
Preference number: 2 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIFQTRT*SIKNAH
Trigger: GTGGGCATTCTTGATACTTCAAGTTCTAGTTTGAAA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTT +
Preference number: 2 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHDALWV*CFSLHF
Trigger: AAAATGCAAACTGAAGCAGCAAACCCACAAAGCATC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278655.8
ENST00000378493.5
ENST00000414679.6
3UTR-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTACATTCCAAGTCTCTCTaGTTTCAGATATCATCTTGT +
Preference number: 2 (lower is better)
Translates to: HHKGELFTPSSFTCDGILHSKSL*FQISSC
Trigger: ACAAGATGATATCTGAAACCAGAGAGACTTGGAATG...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR CCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAACATTCCAAGTCTCTCTaGTTTCAGATATCATCTTGT +
Preference number: 2 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEHSKSL*FQISSC
Trigger: ACAAGATGATATCTGAAACCAGAGAGACTTGGAATG...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGAAGTTGTATTATCAATaGTTGGACTCTGCCTTACTG +
Preference number: 2 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMKLYYQ*LDSALL
Trigger: CAGTAAGGCAGAGTCCAACCATTGATAATACAACTT...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGAGTAATGATGAGTTTTaGCACACATACACTGCTCTA +
Preference number: 2 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVSNDEF*HTYTAL
Trigger: TAGAGCAGTGTATGTGTGCCAAAACTCATCATTACT...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGTTTCAAACTAGAACTTaGAGTATCAAGAATGCCCAC +
Preference number: 2 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVFQTRT*SIKNAH
Trigger: GTGGGCATTCTTGATACTTCAAGTTCTAGTTTGAAA...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTCTTTTCCTAGTGCATaGACTTGCTATGAAATTGCT +
Preference number: 2 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHSFPSA*TCYEIA
Trigger: AGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAGGTGCTTGTGTATCATaGAAACATAGTTCTAGTATT +
Preference number: 2 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLGACVS*KHSSSI
Trigger: AATACTAGAACTATGTTTGCATGATACACAAGCACC...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNNSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHNSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTGTATTATCAATGGTTaGACTCTGCCTTACTGGAAT +
Preference number: 2 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHCIING*TLPYWN
Trigger: ATTCCAGTAAGGCAGAGTCCAACCATTGATAATACA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATAAGTTGTATTATCAATaGTTGGACTCTGCCTTACTG +
Preference number: 2 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHKLYYQ*LDSALL
Trigger: CAGTAAGGCAGAGTCCAACCATTGATAATACAACTT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGAGTAATGATGAGTTTTaGCACACATACACTGCTCTA +
Preference number: 2 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVSNDEF*HTYTAL
Trigger: TAGAGCAGTGTATGTGTGCCAAAACTCATCATTACT...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATGGATTAGTCTTTATTaGTGCTTGTGTATCATGCAA +
Preference number: 2 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLWISLY*CLCIMQ
Trigger: TTGCATGATACACAAGCACCAATAAAGACTAATCCA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR GCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACGGTGCTTGTGTATCATaGAAACATAGTTCTAGTATT +
Preference number: 2 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNGACVS*KHSSSI
Trigger: AATACTAGAACTATGTTTGCATGATACACAAGCACC...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR CCA 72 bp CTAGACTACCGGGTTTCCATGCGCTCCTCTTGGCTTTaGTGGCATGGCTCAATTCCCAGCGGAATACTTTTT +
Preference number: 3 (lower is better)
Translates to: LDYRVSMRSSWL*WHGSIPSGILF
Trigger: AAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR CCA 72 bp TTAGTTCTAGACTACCGGGTTTCCATGCGCTCCTCTTaGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATA +
Preference number: 3 (lower is better)
Translates to: LVLDYRVSMRSS*LWWHGSIPSGI
Trigger: TATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAGAACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTTCCATGCGCTCCTCTaGGCTTTGGTGGCATGGCTC +
Preference number: 3 (lower is better)
Translates to: HLLECVLGANTLDECYACFHALL*ALVAWL
Trigger: GAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR TCA 72 bp CAATTCATCTGGTGCTGTGCCCTAAAATCAGTAATCTaGTTAGTTCTAGACTACCGGGTTTCCATGCGCTCC +
Preference number: 3 (lower is better)
Translates to: QFIWCCALKSVI*LVLDYRVSMRS
Trigger: GGAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCACAGCACCAGATGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTTTCATCCATGGAGTTaGTGTTCAGAAGTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSFHPWS*CSEVCE
Trigger: CTCACAAACTTCTGAACACAAACTCCATGGATGAAA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR CAA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTTTCATCCATGGAGTTaGTGTTCAGAAGTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLFHPWS*CSEVCE
Trigger: CTCACAAACTTCTGAACACAAACTCCATGGATGAAA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 3 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTCACATTTACAAACGTTaGCCAATAACCACTTCACAA +
Preference number: 3 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLHIYKR*PITTSQ
Trigger: TTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTG...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATCATCACAAAGGAGAGTaGTTCACACCAAGCTCATTT +
Preference number: 3 (lower is better)
Translates to: CNSTTAGLKTMQINTVANHHKGE*FTPSSF
Trigger: AAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATCACATTTACAAACGTTaGCCAATAACCACTTCACAA +
Preference number: 3 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADHIYKR*PITTSQ
Trigger: TTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTG...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR CCA 72 bp CTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTaGGTGAAAAACATGCTGAGGGTATTAATAAGCCCC +
Preference number: 3 (lower is better)
Translates to: LKSTRICMFCII*VKNMLRVLISP
Trigger: GGGGCTTATTAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATCACATTTACAAACGTTaGCCAATAACCACTTCACAA +
Preference number: 3 (lower is better)
Translates to: CNSTTAGLKTMQINTVANHIYKR*PITTSQ
Trigger: TTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTG...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATTTCATCCATGGAGTTaGTGTTCAGAAGTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLFHPWS*CSEVCE
Trigger: CTCACAAACTTCTGAACACAAACTCCATGGATGAAA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTTTCATCCATGGAGTTaGTGTTCAGAAGTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMFHPWS*CSEVCE
Trigger: CTCACAAACTTCTGAACACAAACTCCATGGATGAAA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACCATCACAAAGGAGAGTaGTTCACACCAAGCTCATTT +
Preference number: 3 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNHHKGE*FTPSSF
Trigger: AAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTTTCATCCATGGAGTTaGTGTTCAGAAGTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWFHPWS*CSEVCE
Trigger: CTCACAAACTTCTGAACACAAACTCCATGGATGAAA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR CAA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 3 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 3 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHLYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 3 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHLYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR CAA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGTTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 3 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVLYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 3 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 3 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACAAAAAGGCAAAACATTaGCTAGAATGTGTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNKKAKH*LECVLG
Trigger: TCCCAAGACACATTCTAGCAAATGTTTTGCCTTTTT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCCACTTTGCCTGGAGCTaGTGCCGGGGATGCGGCGAC +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCHFAWS*CRGCGD
Trigger: GTCGCCGCATCCCCGGCAGCAGCTCCAGGCAAAGTG...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378473.9
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGGCGACGGCCGCTaGCTGGAGACCCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVCGDGR*LETQCV
Trigger: TACACACTGGGTCTCCAGGCAGCGGCCGTCGCCGCA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378473.9
CDS-3UTR CCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAGCAGCTCACACTGCTaGCTGAGGTGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCSSSHC*LRCRSR
Trigger: CCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCT...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCCCGTGGTGGTTGGTCTaGGCTCAGAGCTACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVPWWLV*AQSYSE
Trigger: CTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGG...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAAGCTGCTGCCGGGGATaGGGCGACGGCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTESCCRG*GDGRCL
Trigger: CAGGCAGCGGCCGTCGCCGCATCCCCGGCAGCAGCT...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378473.9
CDS-3UTR CCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAGCAGCTCACACTGCTaGCTGAGGTGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLSSSHC*LRCRSR
Trigger: CCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCT...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCCGTGGTGGTTGGTCTaGGCTCAGAGCTACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSPWWLV*AQSYSE
Trigger: CTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGATGCCATCCACGCCTaGTCATCTTCTACAGTGACC +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCDAIHA*SSSTVT
Trigger: GGTCACTGTAGAAGATGAGCAGGCGTGGATGGCATC...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCGAGGTCATTGGGGGATaGCAAAGCCCTGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSEVIGG*QSPAWF
Trigger: GAACCAGGCAGGGCTTTGCCATCCCCCAATGACCTC...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR CAA 72 bp TCTAGACTACCGGGTTTCCATGCGCTCCTCTTGGCTTaGGTGGCATGGCTCAATTCCCAGCGGAATACTTTT +
Preference number: 4 (lower is better)
Translates to: SRLPGFHALLLA*VAWLNSQRNTF
Trigger: AAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
3UTR CAA 72 bp ATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCTCTaGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAAT +
Preference number: 4 (lower is better)
Translates to: ISSRLPGFHALL*ALVAWLNSQRN
Trigger: ATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGTCTAGAACTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGCAACAGCTTCCTTGTaGCCCAAGTCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCATASL*PKSSAE
Trigger: TTCTGCTGATGACTTGGGTCACAAGGAAGCTGTTGC...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTGTTTAACTCCCTaGCTCGCCTTTCCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVCCLTP*LAFPVL
Trigger: CAGAACGGGAAAGGCGAGTCAGGGAGTTAAACAGCA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGCACCTGTCCTTCCTTaGCTTCACTTCTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCAPVLP*LHFSMS
Trigger: TGACATGGAGAAGTGAAGGCAAGGAAGGACAGGTGC...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCACTGCTGGCTGAGGTaGAGGTCTCGGATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSHCWLR*RSRISC
Trigger: GCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTTCAGCAGCTCACACTaGTGGCTGAGGTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLFSSSH*WLRCRS
Trigger: AGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCAGCTGCTGGGTTTGCTaGTCGTGGGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVSCWVC*SWALMS
Trigger: ACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCT...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTTTGCCTGGAGCTGCTaGCGGGGATGCGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIFAWSC*RGCGDG
Trigger: GCCGTCGCCGCATCCCCGGCAGCAGCTCCAGGCAAA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378473.9
CDS-3UTR CCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCGAGGTCATTGGGGGATaGCAAAGCCCTGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALEVIGG*QSPAWF
Trigger: GAACCAGGCAGGGCTTTGCCATCCCCCAATGACCTC...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTAGCAGCTCACACTGCTaGCTGAGGTGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACSSSHC*LRCRSR
Trigger: CCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCT...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCGCTCCTCTTGGCTTTaGTGGCATGGCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSRSSWL*WHGSIP
Trigger: GGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTCCGTGGTGGTTGGTCTaGGCTCAGAGCTACTCTGAG +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIPWWLV*AQSYSE
Trigger: CTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGG...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTGCTGTTTAACTCCCTaGCTCGCCTTTCCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSCCLTP*LAFPVL
Trigger: CAGAACGGGAAAGGCGAGTCAGGGAGTTAAACAGCA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTGGGACAGTTTCAGCTaGTGGGTTTGCTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALWDSFS*WVCCSW
Trigger: CCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGAGGTCATTGGGGGATaGCAAAGCCCTGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIEVIGG*QSPAWF
Trigger: GAACCAGGCAGGGCTTTGCCATCCCCCAATGACCTC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTCGACTCGGCCTCCCTTaGGGTAAATGCGACTCATTT +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLRLGLP*GKCDSF
Trigger: AAATGAGTCGCATTTACCCCAAGGGAGGCCGAGTCG...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGAGGCATGTAATTACTaGAATCGACTCGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVEACNY*NRLGLP
Trigger: AGGGAGGCCGAGTCGATTCCAGTAATTACATGCCTC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTGTCGATATCCGGCTTaGAGGCCATCAAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLICRYPA*RPSSGR
Trigger: CCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTGTCGATATCCGGCTTaGAGGCCATCAAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCCRYPA*RPSSGR
Trigger: CCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGGCAGCCGTGGTGGTTaGTCTGAGCTCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGGSRGG*SELRAT
Trigger: AGTAGCTCTGAGCTCAGACCAACCACCACGGCTGCC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTGGCAGCCGTGGTGGTTaGTCTGAGCTCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACGSRGG*SELRAT
Trigger: AGTAGCTCTGAGCTCAGACCAACCACCACGGCTGCC...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGTTCAATACCTTTCTTaGCTTCCACACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCVQYLS*LPHQRP
Trigger: TGGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAAC...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTGGGTTTGCTGCTCGTaGGCATTGATGAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCWVCCS*ALMSSF
Trigger: AAAGCTACTCATCAATGCCCACGAGCAGCAAACCCA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTTGCTTTCCCTGTCATaGGACAGTTTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVLLSLS*DSFSCW
Trigger: CCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTCCATGCGCTCCTCTTaGCTTTGGTGGCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALSMRSS*LWWHGS
Trigger: TGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGCGACGGCCGCTGCCTaGAGACCCAGTGTGTACGCG +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHATAAA*RPSVYA
Trigger: CGCGTACACACTGGGTCTCCAGGCAGCGGCCGTCGC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378473.9
CDS-3UTR TCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCAATTTGAATTCGGGGTaGGCTTCCTCCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVNLNSG*ASSSWS
Trigger: TGACCAAGAGGAGGAAGCTCACCCCGAATTCAAATT...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCAGCTCAGAGCTACTCTaGGGGGTCACATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSSSELL*GVTFAL
Trigger: CAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATGGGATGGCAAAGCCCTaGCTGGTTCAAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADGMAKP*LVQVDV
Trigger: CACATCCACTTGAACCAGGCAGGGCTTTGCCATCCC...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCAGGTCTCGGATTTCTTaGTCCTCAGCACTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSRSRIS*SSALWV
Trigger: TACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCACTGCTGGCTGAGGTaGAGGTCTCGGATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGHCWLR*RSRISC
Trigger: GCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTTCAGCAGCTCACACTaGTGGCTGAGGTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGFSSSH*WLRCRS
Trigger: AGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTCCAATTTCACCATCTaGTGCATCTCCTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLSNFTI*CISFAC
Trigger: GCAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378493.5
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCTACTGTTGCTGGTCTaGGGTCCATCTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLLLLV*GPSRLP
Trigger: TGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTGGGATCCTTTGGTATaGCTCCCGACCGAATACTGT +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSWDPLV*LPTEYC
Trigger: ACAGTATTCGGTCGGGAGCCATACCAAAGGATCCCA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGATTTTGGGATCCTTTaGTATGGCTCCCGACCGAAT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVDFGIL*YGSRPN
Trigger: ATTCGGTCGGGAGCCATACCAAAGGATCCCAAAATC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTTTTGGAAGTGTCACTaGGCACGTCGGCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSFWKCH*ARRLCH
Trigger: GTGACATAGCCGACGTGCCCAGTGACACTTCCAAAA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTTTTGGAAGTGTCACTaGGCACGTCGGCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLFWKCH*ARRLCH
Trigger: GTGACATAGCCGACGTGCCCAGTGACACTTCCAAAA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGAGCAGCTCACACTGCTaGCTGAGGTGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRSSSHC*LRCRSR
Trigger: CCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCT...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTTGGCTTTGGTGGCATaGCTCAATTCCCAGCGGAAT +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLLALVA*LNSQRN
Trigger: ATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCGAACTGTCTGCCAGTaGGATAAGTGTTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSRTVCQ*DKCYGK
Trigger: CTTCCCATAACACTTATCTCACTGGCAGACAGTTCG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCAGGCTGGGCGTAGTTaGTCATTGTGGACAAATATG +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSQAGRS*SLWTNM
Trigger: CATATTTGTCCACAATGATCAACTACGCCCAGCCTG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGCCACATGGAAACCTTaGAACTTTACAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCATWKP*NFTGWA
Trigger: CGCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGCCACATGGAAACCTTaGAACTTTACAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGATWKP*NFTGWA
Trigger: CGCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCAGCTCAGAGCTACTCTaGGGGGTCACATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALSSELL*GVTFAL
Trigger: CAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCT...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTGCTGTTTAACTCCCTaGCTCGCCTTTCCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCCCLTP*LAFPVL
Trigger: CAGAACGGGAAAGGCGAGTCAGGGAGTTAAACAGCA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTCTGAGGGGTCACATTTaGTTTGGCGGTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLILRGHI*FGGVGL
Trigger: AAGGCCAACACCGCCAAAGCAAATGTGACCCCTCAG...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCTGAGGGGTCACATTTaGTTTGGCGGTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCLRGHI*FGGVGL
Trigger: AAGGCCAACACCGCCAAAGCAAATGTGACCCCTCAG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCTGAGGGGTCACATTTaGTTTGGCGGTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLRGHI*FGGVGL
Trigger: AAGGCCAACACCGCCAAAGCAAATGTGACCCCTCAG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGTGCAGTGTAACTTCTaGATGGTACTGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCVQCNF*MVLCSF
Trigger: AAAGGAACACAGTACCATGCAGAAGTTACACTGCAC...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTTCAGCAGCTCACACTaGTGGCTGAGGTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGFSSSH*WLRCRS
Trigger: AGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCAATTTCACCATCTGCTaGATCTCCTTCGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSNFTIC*ISFACS
Trigger: TGAGCAGGCGAAGGAGATGCAGCAGATGGTGAAATT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278655.8
ENST00000378493.5
ENST00000414679.6
CDS-3UTR GCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTGTTTCATACTACTGTTaGTGGTCTGCGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLVSYYC*WSAVHL
Trigger: GAGATGGACCGCAGACCAGCAACAGTAGTATGAAAC...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTACTACCGGGTTTCCATaGGCTCCTCTTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLITTGFP*APLGFG
Trigger: ACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGT...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCAATTTCACCATCTGCTaGATCTCCTTCGCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSNFTIC*ISFALR
Trigger: ACGCAAGGCGAAGGAGATGCAGCAGATGGTGAAATT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR GCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGCTTTTCCTGTCACTTTaGCTGGAGCTGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRLFLSL*LELLPG
Trigger: CCCCGGCAGCAGCTCCAGGCAAAGTGACAGGAAAAG...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378473.9
CDS-3UTR CCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCTTGAGGCATGTCATTaGACTGACGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALLEACH*TDVVGP
Trigger: AGGGCCAACAACGTCAGTCCAATGACATGCCTCAAG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATCGACTCGGCCTCCCTTaGGGTAAATGCGACTCATTT +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADRLGLP*GKCDSF
Trigger: AAATGAGTCGCATTTACCCCAAGGGAGGCCGAGTCG...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCCGCCTCATGAAATCTaGTTTGAGAAGGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALPPHEI*FEKVPA
Trigger: TGCGGGTACCTTCTCAAACCAGATTTCATGAGGCGG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTAGCAGCTCACACTGCTaGCTGAGGTGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISSSHC*LRCRSR
Trigger: CCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCT...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCACTGATCCATTTCTTTaGACTGCTTCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCTDPFL*TASWQV
Trigger: GACTTGCCATGAAGCAGTCCAAAGAAATGGATCAGT...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTCATACTACTGTTGCTaGTCTGCGGTCCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGSYYCC*SAVHLG
Trigger: GCCGAGATGGACCGCAGACCAGCAACAGTAGTATGA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTCATACTACTGTTGCTaGTCTGCGGTCCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCSYYCC*SAVHLG
Trigger: GCCGAGATGGACCGCAGACCAGCAACAGTAGTATGA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATGGGCAGCTCTGGACTaGCTGCAGGTGATGTCCACT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLWAALD*LQVMST
Trigger: AGTGGACATCACCTGCAGTCAGTCCAGAGCTGCCCA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378473.9
CDS-3UTR TCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGTTCATACATCTCAATaGTCTGCATTGCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVVHTSQ*SALPFW
Trigger: CCAAAAGGGCAATGCAGATCATTGAGATGTATGAAC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTGGTTCAAGTGGATGTaGTTCAAGTGCTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCWFKWM*FKCLFQ
Trigger: TTGAAACAAGCACTTGAATCACATCCACTTGAACCA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGCAACAGCTTCCTTGTaGCCCAAGTCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIATASL*PKSSAE
Trigger: TTCTGCTGATGACTTGGGTCACAAGGAAGCTGTTGC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATGCAACAGCTTCCTTGTaGCCCAAGTCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADATASL*PKSSAE
Trigger: TTCTGCTGATGACTTGGGTCACAAGGAAGCTGTTGC...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCAGGCTGGGCGTAGTTaGTCATTGTGGACAAATATG +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALQAGRS*SLWTNM
Trigger: CATATTTGTCCACAATGATCAACTACGCCCAGCCTG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTAGCTCAGAGCTACTCTaGGGGGTCACATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLISSELL*GVTFAL
Trigger: CAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCT...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAGCTCAGAGCTACTCTaGGGGGTCACATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGSSELL*GVTFAL
Trigger: CAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCGTGGTGGTTGGTCTaGGCTCAGAGCTACTCTGAG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIPWWLV*AQSYSE
Trigger: CTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTCTAGGATTTTCTCATaGGTCGACTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCSRIFS*VDFSLS
Trigger: TGACAAAGAGAAGTCGACTCATGAGAAAATCCTAGA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTGCTGTTTAACTCCCTaGCTCGCCTTTCCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANCCLTP*LAFPVL
Trigger: CAGAACGGGAAAGGCGAGTCAGGGAGTTAAACAGCA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACACAGTTCTCCTTTaGGTAATGATGAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCNTVLL*VMMSFG
Trigger: GCCAAAACTCATCATTACTCAAAGGAGAACTGTGTT...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATCTAGATCTGTGCCACTaGAGACACAAACTATCCGCC +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADLDLCH*RHKLSA
Trigger: GGCGGATAGTTTGTGTCTGCAGTGGCACAGATCTAG...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTCTAGATCTGTGCCACTaGAGACACAAACTATCCGCC +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLILDLCH*RHKLSA
Trigger: GGCGGATAGTTTGTGTCTGCAGTGGCACAGATCTAG...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCTTCTTGACGCTATTTaGAACAGCTTCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSLLDAI*NSFLVT
Trigger: GGTCACAAGGAAGCTGTTGCAAATAGCGTCAAGAAG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTGATGCCATCCACGCCTaGTCATCTTCTACAGTGACC +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGDAIHA*SSSTVT
Trigger: GGTCACTGTAGAAGATGAGCAGGCGTGGATGGCATC...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTACATATTTATAAGATaGCATCCACGCCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCYIFIR*HPRLLI
Trigger: GATGAGCAGGCGTGGATGGCATCTTATAAATATGTA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTGTGCTCGCATTTCCTTaGTTTCCCTGTCATGGGACA +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACVLAFP*FPCHGT
Trigger: TGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCAC...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGTGCTCGCATTTCCTTaGTTTCCCTGTCATGGGACA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIVLAFP*FPCHGT
Trigger: TGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCAC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCAATTTCACCATCTGCTaGATCTCCTTCGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALNFTIC*ISFACS
Trigger: TGAGCAGGCGAAGGAGATGCAGCAGATGGTGAAATT...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378493.5
CDS-3UTR GCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGCTACTGTTGCTGGTCTaGGGTCCATCTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRLLLLV*GPSRLP
Trigger: TGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAG...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATACTACCGGGTTTCCATaGGCTCCTCTTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANTTGFP*APLGFG
Trigger: ACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGT...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCATTCATCTGGTGCTGTaGCCTAAAATCAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCIHLVL*PKISNL
Trigger: CAGATTACTGATTTTAGGGCACAGCACCAGATGAAT...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTTGCGTTTGGGACACTaGATGACAGGATTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVLRLGH*MTGFQK
Trigger: CTTTTGAAATCCTGTCATGCAGTGTCCCAAACGCAA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTGGGATCCTTTGGTATaGCTCCCGACCGAATACTGT +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIWDPLV*LPTEYC
Trigger: ACAGTATTCGGTCGGGAGCCATACCAAAGGATCCCA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGAGGTCATTGGGGGATaGCAAAGCCCTGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIEVIGG*QSPAWF
Trigger: GAACCAGGCAGGGCTTTGCCATCCCCCAATGACCTC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGAGGTCATTGGGGGATaGCAAAGCCCTGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVEVIGG*QSPAWF
Trigger: GAACCAGGCAGGGCTTTGCCATCCCCCAATGACCTC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATGTCGATATCCGGCTTaGAGGCCATCAAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLCRYPA*RPSSGR
Trigger: CCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATGGGTCACATTTGCTTTaGCGGTGTTGGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADGSHLL*RCWPFL
Trigger: AAGGAAAGGCCAACACCGCCAAAGCAAATGTGACCC...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGGCAGCCGTGGTGGTTaGTCTGAGCTCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEGSRGG*SELRAT
Trigger: AGTAGCTCTGAGCTCAGACCAACCACCACGGCTGCC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGGGCAGCCGTGGTGGTTaGTCTGAGCTCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMGSRGG*SELRAT
Trigger: AGTAGCTCTGAGCTCAGACCAACCACCACGGCTGCC...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTTGCTTTCCCTGTCATaGGACAGTTTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLILLSLS*DSFSCW
Trigger: CCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATTCATACTACTGTTGCTaGTCTGCGGTCCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDSYYCC*SAVHLG
Trigger: GCCGAGATGGACCGCAGACCAGCAACAGTAGTATGA...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTTGGCTTTGGTGGCATaGCTCAATTCCCAGCGGAAT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLALVA*LNSQRN
Trigger: ATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTGGGCAGCTCTGGACTaGCTGCAGGTGATGTCCACT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHWAALD*LQVMST
Trigger: AGTGGACATCACCTGCAGTCAGTCCAGAGCTGCCCA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378473.9
CDS-3UTR TCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCGAAGACCTAACTCCTTaGGTGCTTGAAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALEDLTP*VLERSP
Trigger: AGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTC...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAATTTGAATTCGGGGTaGGCTTCCTCCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGNLNSG*ASSSWS
Trigger: TGACCAAGAGGAGGAAGCTCACCCCGAATTCAAATT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGCCACATGGAAACCTTaGAACTTTACAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRATWKP*NFTGWA
Trigger: CGCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGC...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATCCGTGGTGGTTGGTCTaGGCTCAGAGCTACTCTGAG +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHPWWLV*AQSYSE
Trigger: CTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGG...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGCTCATCTTCTACAGTaGCCAGGCCCTTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIAHLLQ*PGPFCC
Trigger: ACAACAAAAAGGGCCTGGTCACTGTAGAAGATGAGC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGGGATGGCAAAGCCCTaGCTGGTTCAAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIGMAKP*LVQVDV
Trigger: CACATCCACTTGAACCAGGCAGGGCTTTGCCATCCC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATAGGGATGGCAAAGCCCTaGCTGGTTCAAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIGMAKP*LVQVDV
Trigger: CACATCCACTTGAACCAGGCAGGGCTTTGCCATCCC...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGATGCCATCCACGCCTaGTCATCTTCTACAGTGACC +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALDAIHA*SSSTVT
Trigger: GGTCACTGTAGAAGATGAGCAGGCGTGGATGGCATC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCCCACCTCTACGTAGGTaGCAATTTTCTTATCTGATA +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVPPLRR*QFSYLI
Trigger: TATCAGATAAGAAAATTGGCACCTACGTAGAGGTGG...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCTGAGGGGTCACATTTaGTTTGGCGGTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALLRGHI*FGGVGL
Trigger: AAGGCCAACACCGCCAAAGCAAATGTGACCCCTCAG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTGTGCAGTGTAACTTCTaGATGGTACTGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLVQCNF*MVLCSF
Trigger: AAAGGAACACAGTACCATGCAGAAGTTACACTGCAC...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTTCAGCAGCTCACACTaGTGGCTGAGGTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIFSSSH*WLRCRS
Trigger: AGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGAGCTGCTGGGTTTGCTaGTCGTGGGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRSCWVC*SWALMS
Trigger: ACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCT...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAGCTGCTGGGTTTGCTaGTCGTGGGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALSCWVC*SWALMS
Trigger: ACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATATGGGACAGTTTCAGCTaGTGGGTTTGCTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIWDSFS*WVCCSW
Trigger: CCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCA...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTGGGACAGTTTCAGCTaGTGGGTTTGCTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIWDSFS*WVCCSW
Trigger: CCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTACTACTGTTGCTGGTCTaGGGTCCATCTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILLLLLV*GPSRLP
Trigger: TGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAG...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGTTTCATACTACTGTTaGTGGTCTGCGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIVSYYC*WSAVHL
Trigger: GAGATGGACCGCAGACCAGCAACAGTAGTATGAAAC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVDALWV*CFSLHF
Trigger: AAAATGCAAACTGAAGCAGCAAACCCACAAAGCATC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCCCTAGTGCATGCACTTaGTATGAAATTGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVPSACT*YEIANA
Trigger: TGCATTAGCAATTTCATAGCAAGTGCATGCACTAGG...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTCTTTTCCTAGTGCATaGACTTGCTATGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCSFPSA*TCYEIA
Trigger: AGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGACTACCGGGTTTCCATaGGCTCCTCTTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRTTGFP*APLGFG
Trigger: ACCAAAGCCAAGAGGAGCGCATGGAAACCCGGTAGT...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCCAACAATTCATCTGGTaGTGTGCCCTAAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVQQFIW*CALKSV
Trigger: TACTGATTTTAGGGCACAGCACCAGATGAATTGTTG...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTTGCGTTTGGGACACTaGATGACAGGATTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLLRLGH*MTGFQK
Trigger: CTTTTGAAATCCTGTCATGCAGTGTCCCAAACGCAA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGAGCAGCCAAGATTTTaGGATCCTTTGGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGEQPRF*DPLVWL
Trigger: GAGCCATACCAAAGGATCCCAAAATCTTGGCTGCTC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTTCAGTGAAACCATCTaGCAGCCAGCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACFSETI*QPAFQK
Trigger: TTTCTGGAACGCTGGCTGCCAGATGGTTTCACTGAA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTTCAGTGAAACCATCTaGCAGCCAGCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIFSETI*QPAFQK
Trigger: TTTCTGGAACGCTGGCTGCCAGATGGTTTCACTGAA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATCCGCCTCATGAAATCTaGTTTGAGAAGGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANPPHEI*FEKVPA
Trigger: TGCGGGTACCTTCTCAAACCAGATTTCATGAGGCGG...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGGAATTCCTTACGTATaGTGTCAGTGGGCAACCCAT +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIGIPYV*CQWATH
Trigger: ATGGGTTGCCCACTGACACCATACGTAAGGAATTCC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTGTCGATATCCGGCTTaGAGGCCATCAAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWCRYPA*RPSSGR
Trigger: CCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTCCCATAGCTCTCATTTaGTCTGCTCTCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLPIALI*SALFSV
Trigger: TACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGG...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATGGGTCACATTTGCTTTaGCGGTGTTGGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANGSHLL*RCWPFL
Trigger: AAGGAAAGGCCAACACCGCCAAAGCAAATGTGACCC...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGTTCAATACCTTTCTTaGCTTCCACACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIVQYLS*LPHQRP
Trigger: TGGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAAC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGTTCAATACCTTTCTTaGCTTCCACACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGVQYLS*LPHQRP
Trigger: TGGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAAC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTGCTCCTCAGCACTGTaGGTATTGATCATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALCSSAL*VLIISD
Trigger: GTCAGAAATGATCAATACCCACAGTGCTGAGGAGCA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTATAGAAATCTTAGCCTaGTGTGCTCGCATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLIEILA*CARISL
Trigger: CAAGGAAATGCGAGCACACCAGGCTAAGATTTCTAT...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCCTTTGGACTGCTTCATaGCAAGTCTCTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVLWTAS*QVSFFL
Trigger: AAGAAAGAAAGAGACTTGCCATGAAGCAGTCCAAAG...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCACTGATCCATTTCTTTaGACTGCTTCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSTDPFL*TASWQV
Trigger: GACTTGCCATGAAGCAGTCCAAAGAAATGGATCAGT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAAGTTGTATTATCAATaGTTGGACTCTGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCKLYYQ*LDSALL
Trigger: CAGTAAGGCAGAGTCCAACCATTGATAATACAACTT...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAGTAATGATGAGTTTTaGCACACATACACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCSNDEF*HTYTAL
Trigger: TAGAGCAGTGTATGTGTGCCAAAACTCATCATTACT...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTTGGCTTTGGTGGCATaGCTCAATTCCCAGCGGAAT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANLALVA*LNSQRN
Trigger: ATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGCGCTCCTCTTGGCTTTaGTGGCATGGCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCERSSWL*WHGSIP
Trigger: GGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCG...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCGCTCCTCTTGGCTTTaGTGGCATGGCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVRSSWL*WHGSIP
Trigger: GGGAATTGAGCCATGCCACCAAAGCCAAGAGGAGCG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTCCATGCGCTCCTCTTaGCTTTGGTGGCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMSMRSS*LWWHGS
Trigger: TGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCCATGCGCTCCTCTTaGCTTTGGTGGCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTESMRSS*LWWHGS
Trigger: TGAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGA...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGAAGTTGTGTATGATTaGTCTCAGGCCTTCTACCCA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIEVVYD*SQAFYP
Trigger: TGGGTAGAAGGCCTGAGATCAATCATACACAACTTC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGAAGTTGTGTATGATTaGTCTCAGGCCTTCTACCCA +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGEVVYD*SQAFYP
Trigger: TGGGTAGAAGGCCTGAGATCAATCATACACAACTTC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGAAGACCTAACTCCTTaGGTGCTTGAAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGEDLTP*VLERSP
Trigger: AGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGAAGACCTAACTCCTTaGGTGCTTGAAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIEDLTP*VLERSP
Trigger: AGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTGGTTCAAGTGGATGTaGTTCAAGTGCTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLWFKWM*FKCLFQ
Trigger: TTGAAACAAGCACTTGAATCACATCCACTTGAACCA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGCAACAGCTTCCTTGTaGCCCAAGTCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALATASL*PKSSAE
Trigger: TTCTGCTGATGACTTGGGTCACAAGGAAGCTGTTGC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTCTTCTATCCTTACTTaGGGGATAAGTTCAATACCT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVSSILT*GISSIP
Trigger: AGGTATTGAACTTATCCCTCAAGTAAGGATAGAAGA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCAGCACTGTGGGTATTaGTCATTTCTGACCATTCCT +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACQHCGY*SFLTIP
Trigger: AGGAATGGTCAGAAATGATCAATACCCACAGTGCTG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCAGCACTGTGGGTATTaGTCATTTCTGACCATTCCT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCQHCGY*SFLTIP
Trigger: AGGAATGGTCAGAAATGATCAATACCCACAGTGCTG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATGCTGTTTAACTCCCTaGCTCGCCTTTCCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILCCLTP*LAFPVL
Trigger: CAGAACGGGAAAGGCGAGTCAGGGAGTTAAACAGCA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCCTAAAATCAGTAATCTaGTTAGTTCTAGACTACCGG +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVLKSVI*LVLDYR
Trigger: CCGGTAGTCTAGAACTAATCAGATTACTGATTTTAG...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGGGAGCAAATACTCTTaGCGAGTGTTATGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIGSKYS*RVLCVF
Trigger: AAACACGCATAACACTCGTCAAGAGTATTTGCTCCC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAGGCCTTCTACCCATTaGTTAGTTACTTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLRPSTH*LVTSGF
Trigger: AAATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCT...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGGGATGGCAAAGCCCTaGCTGGTTCAAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHGMAKP*LVQVDV
Trigger: CACATCCACTTGAACCAGGCAGGGCTTTGCCATCCC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGGGATGGCAAAGCCCTaGCTGGTTCAAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWGMAKP*LVQVDV
Trigger: CACATCCACTTGAACCAGGCAGGGCTTTGCCATCCC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCTTCTTGACGCTATTTaGAACAGCTTCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLLDAI*NSFLVT
Trigger: GGTCACAAGGAAGCTGTTGCAAATAGCGTCAAGAAG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCGATGCCATCCACGCCTaGTCATCTTCTACAGTGACC +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIDAIHA*SSSTVT
Trigger: GGTCACTGTAGAAGATGAGCAGGCGTGGATGGCATC...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGCACTGCTGGCTGAGGTaGAGGTCTCGGATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWHCWLR*RSRISC
Trigger: GCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTG...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCACTGCTGGCTGAGGTaGAGGTCTCGGATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHHCWLR*RSRISC
Trigger: GCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAAGCTGCTGGGTTTGCTaGTCGTGGGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTESCWVC*SWALMS
Trigger: ACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCT...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAAGCTGCTGGGTTTGCTaGTCGTGGGCATTGATGAGT +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILSCWVC*SWALMS
Trigger: ACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCT...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTGGGACAGTTTCAGCTaGTGGGTTTGCTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNWDSFS*WVCCSW
Trigger: CCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTGGGACAGTTTCAGCTaGTGGGTTTGCTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWWDSFS*WVCCSW
Trigger: CCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGTGCTCGCATTTCCTTaGTTTCCCTGTCATGGGACA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALVLAFP*FPCHGT
Trigger: TGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCAC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAATCTTAGCCTGGTGTaGTCGCATTTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGNLSLV*SHFLAF
Trigger: GAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGCTACTGTTGCTGGTCTaGGGTCCATCTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVLLLLV*GPSRLP
Trigger: TGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAG...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGCTACTGTTGCTGGTCTaGGGTCCATCTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWLLLLV*GPSRLP
Trigger: TGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAG...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTCAATGGTTGGACTCTaGCTTACTGGAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVSMVGL*LTGIVN
Trigger: ATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCAACAATTCATCTGGTaGTGTGCCCTAAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSQQFIW*CALKSV
Trigger: TACTGATTTTAGGGCACAGCACCAGATGAATTGTTG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTGAGCAGCCAAGATTTTaGGATCCTTTGGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGEQPRF*DPLVWL
Trigger: GAGCCATACCAAAGGATCCCAAAATCTTGGCTGCTC...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCTTGAGGCATGTCATTaGACTGACGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALLEACH*TDVVGP
Trigger: AGGGCCAACAACGTCAGTCCAATGACATGCCTCAAG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGCGACTCGGCCTCCCTTaGGGTAAATGCGACTCATTT +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMRLGLP*GKCDSF
Trigger: AAATGAGTCGCATTTACCCCAAGGGAGGCCGAGTCG...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGCGACTCGGCCTCCCTTaGGGTAAATGCGACTCATTT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCERLGLP*GKCDSF
Trigger: AAATGAGTCGCATTTACCCCAAGGGAGGCCGAGTCG...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCGACTCGGCCTCCCTTaGGGTAAATGCGACTCATTT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIRLGLP*GKCDSF
Trigger: AAATGAGTCGCATTTACCCCAAGGGAGGCCGAGTCG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTTCAGTGAAACCATCTaGCAGCCAGCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGFSETI*QPAFQK
Trigger: TTTCTGGAACGCTGGCTGCCAGATGGTTTCACTGAA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGGGTCACATTTGCTTTaGCGGTGTTGGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRGSHLL*RCWPFL
Trigger: AAGGAAAGGCCAACACCGCCAAAGCAAATGTGACCC...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTGCTCCTCAGCACTGTaGGTATTGATCATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADCSSAL*VLIISD
Trigger: GTCAGAAATGATCAATACCCACAGTGCTGAGGAGCA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCTTTGGACTGCTTCATaGCAAGTCTCTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSLWTAS*QVSFFL
Trigger: AAGAAAGAAAGAGACTTGCCATGAAGCAGTCCAAAG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATCATACTACTGTTGCTaGTCTGCGGTCCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILSYYCC*SAVHLG
Trigger: GCCGAGATGGACCGCAGACCAGCAACAGTAGTATGA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVNSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTGGATTAGTCTTTATTaGTGCTTGTGTATCATGCAA +
Preference number: 4 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCWISLY*CLCIMQ
Trigger: TTGCATGATACACAAGCACCAATAAAGACTAATCCA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCATAAGGTTTGGCCATaGTTATATTCAAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACHKVWP*LYSRLG
Trigger: GCCCAGTCTTGAATATAATCATGGCCAAACCTTATG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378473.9
CDS-3UTR TCA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATGAAGTTGTGTATGATTaGTCTCAGGCCTTCTACCCA +
Preference number: 4 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDEVVYD*SQAFYP
Trigger: TGGGTAGAAGGCCTGAGATCAATCATACACAACTTC...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATGAAGACCTAACTCCTTaGGTGCTTGAAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANEDLTP*VLERSP
Trigger: AGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTC...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCGAACTGTCTGCCAGTaGGATAAGTGTTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALRTVCQ*DKCYGK
Trigger: CTTCCCATAACACTTATCTCACTGGCAGACAGTTCG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAATTTGAATTCGGGGTaGGCTTCCTCCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALNLNSG*ASSSWS
Trigger: TGACCAAGAGGAGGAAGCTCACCCCGAATTCAAATT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGCAACAGCTTCCTTGTaGCCCAAGTCATCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIATASL*PKSSAE
Trigger: TTCTGCTGATGACTTGGGTCACAAGGAAGCTGTTGC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCAGGCTGGGCGTAGTTaGTCATTGTGGACAAATATG +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALQAGRS*SLWTNM
Trigger: CATATTTGTCCACAATGATCAACTACGCCCAGCCTG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGCCACATGGAAACCTTaGAACTTTACAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVATWKP*NFTGWA
Trigger: CGCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATGCCACATGGAAACCTTaGAACTTTACAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHATWKP*NFTGWA
Trigger: CGCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGC...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGGTTTGATAGTTCAGTaGAACCATCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEGLIVQ*NHLAAS
Trigger: GCTGGCTGCCAGATGGTTTCACTGAACTATCAAACC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTAGCTCAGAGCTACTCTaGGGGGTCACATTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISSELL*GVTFAL
Trigger: CAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCT...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGGTATTGATCATTTCTaGCCATTCCTTTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGGIDHF*PFLCVL
Trigger: CAGCACACAAAGGAATGGTCAGAAATGATCAATACC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTTTCAAACTAGAACTTaGAGTATCAAGAATGCCCAC +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLFQTRT*SIKNAH
Trigger: GTGGGCATTCTTGATACTTCAAGTTCTAGTTTGAAA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATGGGAGCAAATACTCTTaGCGAGTGTTATGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANGSKYS*RVLCVF
Trigger: AAACACGCATAACACTCGTCAAGAGTATTTGCTCCC...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGCTAGATCTGTGCCACTaGAGACACAAACTATCCGCC +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMLDLCH*RHKLSA
Trigger: GGCGGATAGTTTGTGTCTGCAGTGGCACAGATCTAG...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTGTTCACTAGATCTGTaGCACTGCAGACACAAACTA +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADCSLDL*HCRHKL
Trigger: TAGTTTGTGTCTGCAGTGGCACAGATCTAGTGAACA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGTACTGTTGATATTTaGTGCAGTGATTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVCTVDI*CSDFQR
Trigger: CCTTTGAAAATCACTGCAGCAAATATCAACAGTACA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTCTTCTTGACGCTATTTaGAACAGCTTCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGLLDAI*NSFLVT
Trigger: GGTCACAAGGAAGCTGTTGCAAATAGCGTCAAGAAG...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATGATGCCATCCACGCCTaGTCATCTTCTACAGTGACC +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHDAIHA*SSSTVT
Trigger: GGTCACTGTAGAAGATGAGCAGGCGTGGATGGCATC...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGCTGAGGGGTCACATTTaGTTTGGCGGTGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVLRGHI*FGGVGL
Trigger: AAGGCCAACACCGCCAAAGCAAATGTGACCCCTCAG...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTTTTGTCAACTTGCGTaGAGTGTAACTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCFCQLA*SVTSAW
Trigger: CCATGCAGAAGTTACACTGCACGCAAGTTGACAAAA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTTTTGTCAACTTGCGTaGAGTGTAACTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIFCQLA*SVTSAW
Trigger: CCATGCAGAAGTTACACTGCACGCAAGTTGACAAAA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCAGGTCTCGGATTTCTTaGTCCTCAGCACTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIRSRIS*SSALWV
Trigger: TACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCT...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAAGGTCTCGGATTTCTTaGTCCTCAGCACTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILRSRIS*SSALWV
Trigger: TACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCT...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTAGGTCTCGGATTTCTTaGTCCTCAGCACTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIRSRIS*SSALWV
Trigger: TACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCT...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGTGCTCGCATTTCCTTaGTTTCCCTGTCATGGGACA +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVVLAFP*FPCHGT
Trigger: TGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCAC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGTGCTCGCATTTCCTTaGTTTCCCTGTCATGGGACA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIVLAFP*FPCHGT
Trigger: TGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCAC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCGCCTTTCCCGTTCTaGTTTATTCTTGATAGATTT +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSSPFPF*FILDRF
Trigger: AAATCTATCAAGAATAAAGCAGAACGGGAAAGGCGA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATCCAATTTCACCATCTaGTGCATCTCCTTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILSNFTI*CISFAC
Trigger: GCAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278655.8
ENST00000378493.5
ENST00000414679.6
CDS-3UTR GCA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGGTGCTTGTGTATCATaGAAACATAGTTCTAGTATT +
Preference number: 4 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVGACVS*KHSSSI
Trigger: AATACTAGAACTATGTTTGCATGATACACAAGCACC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCAACAATTCATCTGGTaGTGTGCCCTAAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALQQFIW*CALKSV
Trigger: TACTGATTTTAGGGCACAGCACCAGATGAATTGTTG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTATAGCAGGTAACACATaGTTTTGTTGCACATTTGAG +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLIAGNT*FCCTFE
Trigger: CTCAAATGTGCAACAAAAGCATGTGTTACCTGCTAT...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGGGATCCTTTGGTATaGCTCCCGACCGAATACTGT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEWDPLV*LPTEYC
Trigger: ACAGTATTCGGTCGGGAGCCATACCAAAGGATCCCA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGAGCAGCCAAGATTTTaGGATCCTTTGGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLREQPRF*DPLVWL
Trigger: GAGCCATACCAAAGGATCCCAAAATCTTGGCTGCTC...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGAGCAGCCAAGATTTTaGGATCCTTTGGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALEQPRF*DPLVWL
Trigger: GAGCCATACCAAAGGATCCCAAAATCTTGGCTGCTC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGCTTGAGGCATGTCATTaGACTGACGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCELEACH*TDVVGP
Trigger: AGGGCCAACAACGTCAGTCCAATGACATGCCTCAAG...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATACTTGAGGCATGTCATTaGACTGACGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVILEACH*TDVVGP
Trigger: AGGGCCAACAACGTCAGTCCAATGACATGCCTCAAG...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTACTTGAGGCATGTCATTaGACTGACGTTGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLLEACH*TDVVGP
Trigger: AGGGCCAACAACGTCAGTCCAATGACATGCCTCAAG...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGAGGCATGTAATTACTaGAATCGACTCGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVEACNY*NRLGLP
Trigger: AGGGAGGCCGAGTCGATTCCAGTAATTACATGCCTC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAGAGGCATGTAATTACTaGAATCGACTCGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEEACNY*NRLGLP
Trigger: AGGGAGGCCGAGTCGATTCCAGTAATTACATGCCTC...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAGAGGCATGTAATTACTaGAATCGACTCGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLEACNY*NRLGLP
Trigger: AGGGAGGCCGAGTCGATTCCAGTAATTACATGCCTC...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGCCGCCTCATGAAATCTaGTTTGAGAAGGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEPPHEI*FEKVPA
Trigger: TGCGGGTACCTTCTCAAACCAGATTTCATGAGGCGG...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTACGTATGGTGTCAGTaGGCAACCCATACATATCCA +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANYVWCQ*ATHTYP
Trigger: TGGATATGTATGGGTTGCCCACTGACACCATACGTA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTACGTATGGTGTCAGTaGGCAACCCATACATATCCA +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGYVWCQ*ATHTYP
Trigger: TGGATATGTATGGGTTGCCCACTGACACCATACGTA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGGAATTCCTTACGTATaGTGTCAGTGGGCAACCCAT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALGIPYV*CQWATH
Trigger: ATGGGTTGCCCACTGACACCATACGTAAGGAATTCC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCCCATAGCTCTCATTTaGTCTGCTCTCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCPIALI*SALFSV
Trigger: TACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATTTTGGAAGTGTCACTaGGCACGTCGGCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILFWKCH*ARRLCH
Trigger: GTGACATAGCCGACGTGCCCAGTGACACTTCCAAAA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCTTTCTTGTCATTTTTaGAAGTGTCACTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCLSCHF*KCHWAR
Trigger: ACGTGCCCAGTGACACTTCCAAAAATGACAAGAAAG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTTGCTTTGGCGGTGTTaGCCTTTCCTTTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANLLWRC*PFLSCH
Trigger: ATGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAGGGTCACATTTGCTTTaGCGGTGTTGGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEGSHLL*RCWPFL
Trigger: AAGGAAAGGCCAACACCGCCAAAGCAAATGTGACCC...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGGGTCACATTTGCTTTaGCGGTGTTGGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILGSHLL*RCWPFL
Trigger: AAGGAAAGGCCAACACCGCCAAAGCAAATGTGACCC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATTGCTCCTCAGCACTGTaGGTATTGATCATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDCSSAL*VLIISD
Trigger: GTCAGAAATGATCAATACCCACAGTGCTGAGGAGCA...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATTGCTTTCCCTGTCATaGGACAGTTTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLLLSLS*DSFSCW
Trigger: CCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATTGCTTTCCCTGTCATaGGACAGTTTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILLLSLS*DSFSCW
Trigger: CCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGAAGTTGTGTATGATTaGTCTCAGGCCTTCTACCCA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALEVVYD*SQAFYP
Trigger: TGGGTAGAAGGCCTGAGATCAATCATACACAACTTC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTGGGGCGTTTTCATCTaGCATCAGATATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGWGVFI*HQISAK
Trigger: TTTTGCAGATATCTGATGTCAGATGAAAACGCCCCA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGCGAACTGTCTGCCAGTaGGATAAGTGTTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMRTVCQ*DKCYGK
Trigger: CTTCCCATAACACTTATCTCACTGGCAGACAGTTCG...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCAAATGCAGTTTCCTTaGTGGCTTGAATTACATCCT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCQMQFP*WLELHP
Trigger: AGGATGTAATTCAAGCCATCAAGGAAACTGCATTTG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGAATTTGAATTCGGGGTaGGCTTCCTCCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMNLNSG*ASSSWS
Trigger: TGACCAAGAGGAGGAAGCTCACCCCGAATTCAAATT...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATAAATTTGAATTCGGGGTaGGCTTCCTCCTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVINLNSG*ASSSWS
Trigger: TGACCAAGAGGAGGAAGCTCACCCCGAATTCAAATT...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTACAGGCTGGGCGTAGTTaGTCATTGTGGACAAATATG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILQAGRS*SLWTNM
Trigger: CATATTTGTCCACAATGATCAACTACGCCCAGCCTG...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGGTTTGATAGTTCAGTaGAACCATCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHGLIVQ*NHLAAS
Trigger: GCTGGCTGCCAGATGGTTTCACTGAACTATCAAACC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATGGTTTGATAGTTCAGTaGAACCATCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHGLIVQ*NHLAAS
Trigger: GCTGGCTGCCAGATGGTTTCACTGAACTATCAAACC...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGGTTTGATAGTTCAGTaGAACCATCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWGLIVQ*NHLAAS
Trigger: GCTGGCTGCCAGATGGTTTCACTGAACTATCAAACC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATGGTATTGATCATTTCTaGCCATTCCTTTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANGIDHF*PFLCVL
Trigger: CAGCACACAAAGGAATGGTCAGAAATGATCAATACC...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATGTGGCAATACTTAGATaGTTTTGCTCTCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADVAILR*FCSLTV
Trigger: CACTGTTAGAGAGCAAAATCATCTAAGTATTGCCAC...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTGTGGCAATACTTAGATaGTTTTGCTCTCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACVAILR*FCSLTV
Trigger: CACTGTTAGAGAGCAAAATCATCTAAGTATTGCCAC...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTAATGGTGAGCATAGTTaGGCTCTTGGATTTGATTTG +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACNGEHS*ALGFDL
Trigger: CAAATCAAATCCAAGAGCTCAACTATGCTCACCATT...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGTTTGGGACACTGCATaGCAGGATTTCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEVWDTA*QDFKSC
Trigger: GCAGCTTTTGAAATCCTGTCATGCAGTGTCCCAAAC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR GCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGCTAGATCTGTGCCACTaGAGACACAAACTATCCGCC +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVLDLCH*RHKLSA
Trigger: GGCGGATAGTTTGTGTCTGCAGTGGCACAGATCTAG...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCTAGATCTGTGCCACTaGAGACACAAACTATCCGCC +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHLDLCH*RHKLSA
Trigger: GGCGGATAGTTTGTGTCTGCAGTGGCACAGATCTAG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTACATCTCAATGATCTaGATTGCCCTTTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCYISMI*IALLAS
Trigger: TGATGCCAAAAGGGCAATGCAGATCATTGAGATGTA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCAATATTGCGTTCTTCTaGCACATGGAAACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALNIAFF*HMETLK
Trigger: TTTCAAGGTTTCCATGTGGCAGAAGAACGCAATATT...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCCACCTCTACGTAGGTaGCAATTTTCTTATCTGATA +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACPPLRR*QFSYLI
Trigger: TATCAGATAAGAAAATTGGCACCTACGTAGAGGTGG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTCCACCTCTACGTAGGTaGCAATTTTCTTATCTGATA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIPPLRR*QFSYLI
Trigger: TATCAGATAAGAAAATTGGCACCTACGTAGAGGTGG...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATGTGCAGTGTAACTTCTaGATGGTACTGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANVQCNF*MVLCSF
Trigger: AAAGGAACACAGTACCATGCAGAAGTTACACTGCAC...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTACAATTTTGTCAACTTaGGTGCAGTGTAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLITILST*VQCNFC
Trigger: GCAGAAGTTACACTGCACGCAAGTTGACAAAATTGT...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATAGGTCTCGGATTTCTTaGTCCTCAGCACTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHRSRIS*SSALWV
Trigger: TACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCGTTTCATACTACTGTTaGTGGTCTGCGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIVSYYC*WSAVHL
Trigger: GAGATGGACCGCAGACCAGCAACAGTAGTATGAAAC...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATAGTTTCATACTACTGTTaGTGGTCTGCGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIVSYYC*WSAVHL
Trigger: GAGATGGACCGCAGACCAGCAACAGTAGTATGAAAC...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTCTTTTCCTAGTGCATaGACTTGCTATGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALSFPSA*TCYEIA
Trigger: AGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCAGAATCTGCATGTTTTaGATCATTTGGGTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSRICMF*IIWVKN
Trigger: GTTTTTCACCCAAATGATGCAAAACATGCAGATTCT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCAGGATTTCAAAAGCTaGTCATTCTGTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGQDFKS*SFCFSR
Trigger: CCTAGAGAAACAGAATGAGCAGCTTTTGAAATCCTG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR GCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGAATTTCACCATCTGCTaGATCTCCTTCGCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCENFTIC*ISFALR
Trigger: ACGCAAGGCGAAGGAGATGCAGCAGATGGTGAAATT...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTCCAATTTCACCATCTaGTGCATCTCCTTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISNFTI*CISFAL
Trigger: CAAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR GCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCCAATTTCACCATCTaGTGCATCTCCTTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTESNFTI*CISFAL
Trigger: CAAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGA...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTGGGATCCTTTGGTATaGCTCCCGACCGAATACTGT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWWDPLV*LPTEYC
Trigger: ACAGTATTCGGTCGGGAGCCATACCAAAGGATCCCA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCGTTATTATTGGTTCTTaGTCTTCACCTTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALVIIGS*SSPFPS
Trigger: GGATGGAAAAGGTGAAGACCAAGAACCAATAATAAC...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCCATGAGTTATTATTaGTTCTTGGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSSMSYY*FLVFTF
Trigger: AAAGGTGAAGACCAAGAACCAATAATAACTCATGGA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGTGGACAAATATGGATaGATATTAGTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGVDKYG*ILVVAP
Trigger: AGGTGCTACCACTAATATCCATCCATATTTGTCCAC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGAGGCATGTAATTACTaGAATCGACTCGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHEACNY*NRLGLP
Trigger: AGGGAGGCCGAGTCGATTCCAGTAATTACATGCCTC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTTCAGTGAAACCATCTaGCAGCCAGCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEFSETI*QPAFQK
Trigger: TTTCTGGAACGCTGGCTGCCAGATGGTTTCACTGAA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTTCAGTGAAACCATCTaGCAGCCAGCGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMFSETI*QPAFQK
Trigger: TTTCTGGAACGCTGGCTGCCAGATGGTTTCACTGAA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACCCGCCTCATGAAATCTaGTTTGAGAAGGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNPPHEI*FEKVPA
Trigger: TGCGGGTACCTTCTCAAACCAGATTTCATGAGGCGG...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTACGTATGGTGTCAGTaGGCAACCCATACATATCCA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALYVWCQ*ATHTYP
Trigger: TGGATATGTATGGGTTGCCCACTGACACCATACGTA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTTGCTTTGGCGGTGTTaGCCTTTCCTTTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALLLWRC*PFLSCH
Trigger: ATGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGGTTCAATACCTTTCTTaGCTTCCACACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMVQYLS*LPHQRP
Trigger: TGGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAAC...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATAGTGTAACTTCTGCATaGTACTGTGTTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADSVTSA*YCVPLH
Trigger: ATGCAAAGGAACACAGTACCATGCAGAAGTTACACT...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGCTCCTCAGCACTGTaGGTATTGATCATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALCSSAL*VLIISD
Trigger: GTCAGAAATGATCAATACCCACAGTGCTGAGGAGCA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGTGGGTTTGCTGCTCGTaGGCATTGATGAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVWVCCS*ALMSSF
Trigger: AAAGCTACTCATCAATGCCCACGAGCAGCAAACCCA...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTGGGTTTGCTGCTCGTaGGCATTGATGAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIWVCCS*ALMSSF
Trigger: AAAGCTACTCATCAATGCCCACGAGCAGCAAACCCA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTGGGTTTGCTGCTCGTaGGCATTGATGAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMWVCCS*ALMSSF
Trigger: AAAGCTACTCATCAATGCCCACGAGCAGCAAACCCA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATGGGTTTGCTGCTCGTaGGCATTGATGAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILWVCCS*ALMSSF
Trigger: AAAGCTACTCATCAATGCCCACGAGCAGCAAACCCA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTTGCTTTCCCTGTCATaGGACAGTTTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNLLSLS*DSFSCW
Trigger: CCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATCTTTGGACTGCTTCATaGCAAGTCTCTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADLWTAS*QVSFFL
Trigger: AAGAAAGAAAGAGACTTGCCATGAAGCAGTCCAAAG...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTACTGATCCATTTCTTTaGACTGCTTCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGTDPFL*TASWQV
Trigger: GACTTGCCATGAAGCAGTCCAAAGAAATGGATCAGT...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTGGATTAGTCTTTATTaGTGCTTGTGTATCATGCAA +
Preference number: 4 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLWISLY*CLCIMQ
Trigger: TTGCATGATACACAAGCACCAATAAAGACTAATCCA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTTGGCTTTGGTGGCATaGCTCAATTCCCAGCGGAAT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHLALVA*LNSQRN
Trigger: ATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGCAAACTCATCCACTTTaGAGAGGCAGTTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMQTHPL*RGSWVQ
Trigger: TTGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTG...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGAAGTTGTGTATGATTaGTCTCAGGCCTTCTACCCA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIEVVYD*SQAFYP
Trigger: TGGGTAGAAGGCCTGAGATCAATCATACACAACTTC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGAAGACCTAACTCCTTaGGTGCTTGAAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIEDLTP*VLERSP
Trigger: AGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCGAACTGTCTGCCAGTaGGATAAGTGTTATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHRTVCQ*DKCYGK
Trigger: CTTCCCATAACACTTATCTCACTGGCAGACAGTTCG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCACATTGCTTTTCCATaGGTTATTATTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACHIAFP*VIIGSW
Trigger: CCAAGAACCAATAATAACTCATGGAAAAGCAATGTG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTCACATTGCTTTTCCATaGGTTATTATTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIHIAFP*VIIGSW
Trigger: CCAAGAACCAATAATAACTCATGGAAAAGCAATGTG...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCACATTGCTTTTCCATaGGTTATTATTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCHIAFP*VIIGSW
Trigger: CCAAGAACCAATAATAACTCATGGAAAAGCAATGTG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCACATTGCTTTTCCATaGGTTATTATTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGHIAFP*VIIGSW
Trigger: CCAAGAACCAATAATAACTCATGGAAAAGCAATGTG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGTTTCCTTGATGGCTTaGATTACATCCTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCVSLMA*ITSLKR
Trigger: CCTTTTTAAGGATGTAATTCAAGCCATCAAGGAAAC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCAGGCTGGGCGTAGTTaGTCATTGTGGACAAATATG +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHQAGRS*SLWTNM
Trigger: CATATTTGTCCACAATGATCAACTACGCCCAGCCTG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTGTAGCCAAGACCGACTaGTTCATTAAAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGVAKTD*FIKRRH
Trigger: ATGTCTTCTTTTAATGAATCAGTCGGTCTTGGCTAC...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTCTGATGTCAGCGTCTaGATTTTGATTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGSDVSV*ILISVS
Trigger: AGAAACAGAAATCAAAATTCAGACGCTGACATCAGA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCAGCACTGTGGGTATTaGTCATTTCTGACCATTCCT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIQHCGY*SFLTIP
Trigger: AGGAATGGTCAGAAATGATCAATACCCACAGTGCTG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGCAGCACTGTGGGTATTaGTCATTTCTGACCATTCCT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEQHCGY*SFLTIP
Trigger: AGGAATGGTCAGAAATGATCAATACCCACAGTGCTG...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTCTAAAATCAGTAATCTaGTTAGTTCTAGACTACCGG +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLILKSVI*LVLDYR
Trigger: CCGGTAGTCTAGAACTAATCAGATTACTGATTTTAG...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGTTTGGGACACTGCATaGCAGGATTTCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVVWDTA*QDFKSC
Trigger: GCAGCTTTTGAAATCCTGTCATGCAGTGTCCCAAAC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGCTCATCTTCTACAGTaGCCAGGCCCTTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVAHLLQ*PGPFCC
Trigger: ACAACAAAAAGGGCCTGGTCACTGTAGAAGATGAGC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378473.9
CDS-3UTR GCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGTATCTGTCAAAAACTaGTCCTTCTTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCVSVKN*SFLQKG
Trigger: TCCTTTTTGCAAGAAGGAGCAGTTTTTGACAGATAC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGTATCTGTCAAAAACTaGTCCTTCTTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGVSVKN*SFLQKG
Trigger: TCCTTTTTGCAAGAAGGAGCAGTTTTTGACAGATAC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGTTCACTAGATCTGTaGCACTGCAGACACAAACTA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALCSLDL*HCRHKL
Trigger: TAGTTTGTGTCTGCAGTGGCACAGATCTAGTGAACA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTAGGCCTTCTACCCATTaGTTAGTTACTTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGRPSTH*LVTSGF
Trigger: AAATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCT...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATCTGACATCAGATATCTaGAAAACCCATCACTTGATA +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADLTSDI*KTHHLI
Trigger: TATCAAGTGATGGGTTTTGCAGATATCTGATGTCAG...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCTGACATCAGATATCTaGAAAACCCATCACTTGATA +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLTSDI*KTHHLI
Trigger: TATCAAGTGATGGGTTTTGCAGATATCTGATGTCAG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCCTTCTTGACGCTATTTaGAACAGCTTCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRILLDAI*NSFLVT
Trigger: GGTCACAAGGAAGCTGTTGCAAATAGCGTCAAGAAG...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTAATATTGCGTTCTTCTaGCACATGGAAACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLINIAFF*HMETLK
Trigger: TTTCAAGGTTTCCATGTGGCAGAAGAACGCAATATT...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAATATTGCGTTCTTCTaGCACATGGAAACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGNIAFF*HMETLK
Trigger: TTTCAAGGTTTCCATGTGGCAGAAGAACGCAATATT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATACAATTTTGTCAACTTaGGTGCAGTGTAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDTILST*VQCNFC
Trigger: GCAGAAGTTACACTGCACGCAAGTTGACAAAATTGT...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCTCTTTGTCATACTGTaGCACAATTTTGTCAACTTG +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACLFVIL*HNFVNL
Trigger: CAAGTTGACAAAATTGTGGCACAGTATGACAAAGAG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAAATCTTAGCCTGGTGTaGTCGCATTTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLNLSLV*SHFLAF
Trigger: GAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATT...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGAATCTTAGCCTGGTGTaGTCGCATTTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCENLSLV*SHFLAF
Trigger: GAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATT...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTCGCCTTTCCCGTTCTaGTTTATTCTTGATAGATTT +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACSPFPF*FILDRF
Trigger: AAATCTATCAAGAATAAAGCAGAACGGGAAAGGCGA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTCGCCTTTCCCGTTCTaGTTTATTCTTGATAGATTT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCSPFPF*FILDRF
Trigger: AAATCTATCAAGAATAAAGCAGAACGGGAAAGGCGA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGAATTTCACCATCTGCTaGATCTCCTTCGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVNFTIC*ISFACS
Trigger: TGAGCAGGCGAAGGAGATGCAGCAGATGGTGAAATT...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378493.5
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGTTTCATACTACTGTTaGTGGTCTGCGGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWVSYYC*WSAVHL
Trigger: GAGATGGACCGCAGACCAGCAACAGTAGTATGAAAC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTCAATGGTTGGACTCTaGCTTACTGGAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGSMVGL*LTGIVN
Trigger: ATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTCAATGGTTGGACTCTaGCTTACTGGAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCSMVGL*LTGIVN
Trigger: ATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCAGAATCTGCATGTTTTaGATCATTTGGGTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: CPKISNLISSRLPGFHALRICMF*IIWVKN
Trigger: GTTTTTCACCCAAATGATGCAAAACATGCAGATTCT...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTGTTATTATTGGTTCTTaGTCTTCACCTTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACVIIGS*SSPFPS
Trigger: GGATGGAAAAGGTGAAGACCAAGAACCAATAATAAC...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTACGTATGGTGTCAGTaGGCAACCCATACATATCCA +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEYVWCQ*ATHTYP
Trigger: TGGATATGTATGGGTTGCCCACTGACACCATACGTA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACGGAATTCCTTACGTATaGTGTCAGTGGGCAACCCAT +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNGIPYV*CQWATH
Trigger: ATGGGTTGCCCACTGACACCATACGTAAGGAATTCC...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATGGAATTCCTTACGTATaGTGTCAGTGGGCAACCCAT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHGIPYV*CQWATH
Trigger: ATGGGTTGCCCACTGACACCATACGTAAGGAATTCC...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGGAATTCCTTACGTATaGTGTCAGTGGGCAACCCAT +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVGIPYV*CQWATH
Trigger: ATGGGTTGCCCACTGACACCATACGTAAGGAATTCC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTTGCTTTGGCGGTGTTaGCCTTTCCTTTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDILLWRC*PFLSCH
Trigger: ATGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGTTCAATACCTTTCTTaGCTTCCACACCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWVQYLS*LPHQRP
Trigger: TGGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAAC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTGCTCCTCAGCACTGTaGGTATTGATCATTTCTGAC +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMCSSAL*VLIISD
Trigger: GTCAGAAATGATCAATACCCACAGTGCTGAGGAGCA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCATTCCAAGTCTCTCTaGTTTCAGATATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCHSKSL*FQISSC
Trigger: ACAAGATGATATCTGAAACCAGAGAGACTTGGAATG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTGTATTATCAATGGTTaGACTCTGCCTTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGCIING*TLPYWN
Trigger: ATTCCAGTAAGGCAGAGTCCAACCATTGATAATACA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCAAGTTGTATTATCAATaGTTGGACTCTGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCKLYYQ*LDSALL
Trigger: CAGTAAGGCAGAGTCCAACCATTGATAATACAACTT...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
3UTR CAA 72 bp CAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTaGTTCACACCAAGCTCATTTACTTGTGATGGTATT +
Preference number: 4 (lower is better)
Translates to: QFKHVLRHHKGE*FTPSSFTCDGI
Trigger: AATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTACATAAGGTTTGGCCATaGTTATATTCAAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLHKVWP*LYSRLG
Trigger: GCCCAGTCTTGAATATAATCATGGCCAAACCTTATG...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278655.8
ENST00000378473.9
CDS-3UTR TCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGTTCATACATCTCAATaGTCTGCATTGCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVVHTSQ*SALPFW
Trigger: CCAAAAGGGCAATGCAGATCATTGAGATGTATGAAC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGTTCATACATCTCAATaGTCTGCATTGCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILVHTSQ*SALPFW
Trigger: CCAAAAGGGCAATGCAGATCATTGAGATGTATGAAC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGTGGGGCGTTTTCATCTaGCATCAGATATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVWGVFI*HQISAK
Trigger: TTTTGCAGATATCTGATGTCAGATGAAAACGCCCCA...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTGGGGCGTTTTCATCTaGCATCAGATATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIWGVFI*HQISAK
Trigger: TTTTGCAGATATCTGATGTCAGATGAAAACGCCCCA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGGTTCATTTCCAAATTTaGATTCGGGGTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMVHFQI*IRGELP
Trigger: AGGAAGCTCACCCCGAATTCAAATTTGGAAATGAAC...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAGTTCATTTCCAAATTTaGATTCGGGGTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEVHFQI*IRGELP
Trigger: AGGAAGCTCACCCCGAATTCAAATTTGGAAATGAAC...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGTTCATTTCCAAATTTaGATTCGGGGTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEVHFQI*IRGELP
Trigger: AGGAAGCTCACCCCGAATTCAAATTTGGAAATGAAC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTCTTCTATCCTTACTTaGGGGATAAGTTCAATACCT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANSSILT*GISSIP
Trigger: AGGTATTGAACTTATCCCTCAAGTAAGGATAGAAGA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTCTTCTATCCTTACTTaGGGGATAAGTTCAATACCT +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGSSILT*GISSIP
Trigger: AGGTATTGAACTTATCCCTCAAGTAAGGATAGAAGA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGGGTATTGATCATTTCTaGCCATTCCTTTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMGIDHF*PFLCVL
Trigger: CAGCACACAAAGGAATGGTCAGAAATGATCAATACC...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGGTATTGATCATTTCTaGCCATTCCTTTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIGIDHF*PFLCVL
Trigger: CAGCACACAAAGGAATGGTCAGAAATGATCAATACC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGCAGCACTGTGGGTATTaGTCATTTCTGACCATTCCT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWQHCGY*SFLTIP
Trigger: AGGAATGGTCAGAAATGATCAATACCCACAGTGCTG...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATCTAAAATCAGTAATCTaGTTAGTTCTAGACTACCGG +
Preference number: 4 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDLKSVI*LVLDYR
Trigger: CCGGTAGTCTAGAACTAATCAGATTACTGATTTTAG...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGGGAGCAAATACTCTTaGCGAGTGTTATGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWGSKYS*RVLCVF
Trigger: AAACACGCATAACACTCGTCAAGAGTATTTGCTCCC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATCTCTTGGATTTGATTTaGTTTGATGATGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDLLDLI*FDDEKP
Trigger: TGGCTTCTCATCATCAAATCAAATCAAATCCAAGAG...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTGTTCACTAGATCTGTaGCACTGCAGACACAAACTA +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMCSLDL*HCRHKL
Trigger: TAGTTTGTGTCTGCAGTGGCACAGATCTAGTGAACA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTGTTCACTAGATCTGTaGCACTGCAGACACAAACTA +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRICSLDL*HCRHKL
Trigger: TAGTTTGTGTCTGCAGTGGCACAGATCTAGTGAACA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAGGCCTTCTACCCATTaGTTAGTTACTTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALRPSTH*LVTSGF
Trigger: AAATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATCTGACATCAGATATCTaGAAAACCCATCACTTGATA +
Preference number: 4 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDLTSDI*KTHHLI
Trigger: TATCAAGTGATGGGTTTTGCAGATATCTGATGTCAG...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTACTGTTGATATTTGCTaGAGTGATTTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACTVDIC*SDFQRR
Trigger: TCTCCTTTGAAAATCACTGCAGCAAATATCAACAGT...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTACTGTTGATATTTGCTaGAGTGATTTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLITVDIC*SDFQRR
Trigger: TCTCCTTTGAAAATCACTGCAGCAAATATCAACAGT...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTGTACTGTTGATATTTaGTGCAGTGATTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADCTVDI*CSDFQR
Trigger: CCTTTGAAAATCACTGCAGCAAATATCAACAGTACA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTACATATTTATAAGATaGCATCCACGCCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALYIFIR*HPRLLI
Trigger: GATGAGCAGGCGTGGATGGCATCTTATAAATATGTA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTGTTATAATGAATATTaGGTTCTTCTGCCACATGGA +
Preference number: 4 (lower is better)
Translates to: VQTCPKASQRRVVHTKLICYNEY*VLLPHG
Trigger: TCCATGTGGCAGAAGAACGCAATATTCATTATAACA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTGTTATAATGAATATTaGGTTCTTCTGCCACATGGA +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACCYNEY*VLLPHG
Trigger: TCCATGTGGCAGAAGAACGCAATATTCATTATAACA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGTGCAGTGTAACTTCTaGATGGTACTGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVVQCNF*MVLCSF
Trigger: AAAGGAACACAGTACCATGCAGAAGTTACACTGCAC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGTGCAGTGTAACTTCTaGATGGTACTGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEVQCNF*MVLCSF
Trigger: AAAGGAACACAGTACCATGCAGAAGTTACACTGCAC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATTTTGTCAACTTGCGTaGAGTGTAACTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLFCQLA*SVTSAW
Trigger: CCATGCAGAAGTTACACTGCACGCAAGTTGACAAAA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTTTTGTCAACTTGCGTaGAGTGTAACTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIFCQLA*SVTSAW
Trigger: CCATGCAGAAGTTACACTGCACGCAAGTTGACAAAA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGACAATTTTGTCAACTTaGGTGCAGTGTAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALTILST*VQCNFC
Trigger: GCAGAAGTTACACTGCACGCAAGTTGACAAAATTGT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTCTCTTTGTCATACTGTaGCACAATTTTGTCAACTTG +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGLFVIL*HNFVNL
Trigger: CAAGTTGACAAAATTGTGGCACAGTATGACAAAGAG...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATAATCTTAGCCTGGTGTaGTCGCATTTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHNLSLV*SHFLAF
Trigger: GAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATT...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATAATCTTAGCCTGGTGTaGTCGCATTTCCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHNLSLV*SHFLAF
Trigger: GAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTCGCCTTTCCCGTTCTaGTTTATTCTTGATAGATTT +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANSPFPF*FILDRF
Trigger: AAATCTATCAAGAATAAAGCAGAACGGGAAAGGCGA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTCAATGGTTGGACTCTaGCTTACTGGAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGSMVGL*LTGIVN
Trigger: ATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCCTAGTGCATGCACTTaGTATGAAATTGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALPSACT*YEIANA
Trigger: TGCATTAGCAATTTCATAGCAAGTGCATGCACTAGG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATGGTGCTTGTGTATCATaGAAACATAGTTCTAGTATT +
Preference number: 4 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADGACVS*KHSSSI
Trigger: AATACTAGAACTATGTTTGCATGATACACAAGCACC...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGATTCATCTGGTGCTGTaGCCTAAAATCAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALIHLVL*PKISNL
Trigger: CAGATTACTGATTTTAGGGCACAGCACCAGATGAAT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTATAGCAGGTAACACATaGTTTTGTTGCACATTTGAG +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGIAGNT*FCCTFE
Trigger: CTCAAATGTGCAACAAAAGCATGTGTTACCTGCTAT...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTCCATGAGTTATTATTaGTTCTTGGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: HLLECVLGANTLDECYACSMSYY*FLVFTF
Trigger: AAAGGTGAAGACCAAGAACCAATAATAACTCATGGA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTCCATGAGTTATTATTaGTTCTTGGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: VCVQKFVSESFDALWVCCSMSYY*FLVFTF
Trigger: AAAGGTGAAGACCAAGAACCAATAATAACTCATGGA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGTGGACAAATATGGATaGATATTAGTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALVDKYG*ILVVAP
Trigger: AGGTGCTACCACTAATATCCATCCATATTTGTCCAC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTACGTATGGTGTCAGTaGGCAACCCATACATATCCA +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWYVWCQ*ATHTYP
Trigger: TGGATATGTATGGGTTGCCCACTGACACCATACGTA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCCATAGCTCTCATTTaGTCTGCTCTCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIPIALI*SALFSV
Trigger: TACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGCCCATAGCTCTCATTTaGTCTGCTCTCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEPIALI*SALFSV
Trigger: TACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGG...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGCTTTCTTGTCATTTTTaGAAGTGTCACTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMLSCHF*KCHWAR
Trigger: ACGTGCCCAGTGACACTTCCAAAAATGACAAGAAAG...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCTTTCTTGTCATTTTTaGAAGTGTCACTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVLSCHF*KCHWAR
Trigger: ACGTGCCCAGTGACACTTCCAAAAATGACAAGAAAG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCTTTCTTGTCATTTTTaGAAGTGTCACTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDILSCHF*KCHWAR
Trigger: ACGTGCCCAGTGACACTTCCAAAAATGACAAGAAAG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTTGCTTTGGCGGTGTTaGCCTTTCCTTTCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHLLWRC*PFLSCH
Trigger: ATGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAATAGAAATCTTAGCCTaGTGTGCTCGCATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILIEILA*CARISL
Trigger: CAAGGAAATGCGAGCACACCAGGCTAAGATTTCTAT...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCTTTGGACTGCTTCATaGCAAGTCTCTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALLWTAS*QVSFFL
Trigger: AAGAAAGAAAGAGACTTGCCATGAAGCAGTCCAAAG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGACTGATCCATTTCTTTaGACTGCTTCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVTDPFL*TASWQV
Trigger: GACTTGCCATGAAGCAGTCCAAAGAAATGGATCAGT...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTGTATTATCAATGGTTaGACTCTGCCTTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGCIING*TLPYWN
Trigger: ATTCCAGTAAGGCAGAGTCCAACCATTGATAATACA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACGTTCATACATCTCAATaGTCTGCATTGCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNVHTSQ*SALPFW
Trigger: CCAAAAGGGCAATGCAGATCATTGAGATGTATGAAC...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTGGGGCGTTTTCATCTaGCATCAGATATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNWGVFI*HQISAK
Trigger: TTTTGCAGATATCTGATGTCAGATGAAAACGCCCCA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTTTCCTTGATGGCTTaGATTACATCCTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRVSLMA*ITSLKR
Trigger: CCTTTTTAAGGATGTAATTCAAGCCATCAAGGAAAC...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGCAAATGCAGTTTCCTTaGTGGCTTGAATTACATCCT +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMQMQFP*WLELHP
Trigger: AGGATGTAATTCAAGCCATCAAGGAAACTGCATTTG...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGTGGTTCAAGTGGATGTaGTTCAAGTGCTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVWFKWM*FKCLFQ
Trigger: TTGAAACAAGCACTTGAATCACATCCACTTGAACCA...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGGTTCAAGTGGATGTaGTTCAAGTGCTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEWFKWM*FKCLFQ
Trigger: TTGAAACAAGCACTTGAATCACATCCACTTGAACCA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGTTCATTTCCAAATTTaGATTCGGGGTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWVHFQI*IRGELP
Trigger: AGGAAGCTCACCCCGAATTCAAATTTGGAAATGAAC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACGTTCATTTCCAAATTTaGATTCGGGGTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNVHFQI*IRGELP
Trigger: AGGAAGCTCACCCCGAATTCAAATTTGGAAATGAAC...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGTAGCCAAGACCGACTaGTTCATTAAAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILVAKTD*FIKRRH
Trigger: ATGTCTTCTTTTAATGAATCAGTCGGTCTTGGCTAC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAGTAGCCAAGACCGACTaGTTCATTAAAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLVAKTD*FIKRRH
Trigger: ATGTCTTCTTTTAATGAATCAGTCGGTCTTGGCTAC...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTCTAGGATTTTCTCATaGGTCGACTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMSRIFS*VDFSLS
Trigger: TGACAAAGAGAAGTCGACTCATGAGAAAATCCTAGA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATATCTAGGATTTTCTCATaGGTCGACTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVISRIFS*VDFSLS
Trigger: TGACAAAGAGAAGTCGACTCATGAGAAAATCCTAGA...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTCTAGGATTTTCTCATaGGTCGACTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISRIFS*VDFSLS
Trigger: TGACAAAGAGAAGTCGACTCATGAGAAAATCCTAGA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGGTATTGATCATTTCTaGCCATTCCTTTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHGIDHF*PFLCVL
Trigger: CAGCACACAAAGGAATGGTCAGAAATGATCAATACC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGTGTTCAGAAGTTTGTaGGTGAGTCTTTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEVFRSL*VSLLML
Trigger: AAGCATCAAAAGACTCACTCACAAACTTCTGAACAC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGAACACAGTTCTCCTTTaGGTAATGATGAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCENTVLL*VMMSFG
Trigger: GCCAAAACTCATCATTACTCAAAGGAGAACTGTGTT...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCAACACAGTTCTCCTTTaGGTAATGATGAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRINTVLL*VMMSFG
Trigger: GCCAAAACTCATCATTACTCAAAGGAGAACTGTGTT...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGTGGCAATACTTAGATaGTTTTGCTCTCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILVAILR*FCSLTV
Trigger: CACTGTTAGAGAGCAAAATCATCTAAGTATTGCCAC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGTTTCAAACTAGAACTTaGAGTATCAAGAATGCCCAC +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRFQTRT*SIKNAH
Trigger: GTGGGCATTCTTGATACTTCAAGTTCTAGTTTGAAA...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGAATGGTGAGCATAGTTaGGCTCTTGGATTTGATTTG +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVNGEHS*ALGFDL
Trigger: CAAATCAAATCCAAGAGCTCAACTATGCTCACCATT...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCAGGCCTTCTACCCATTaGTTAGTTACTTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIRPSTH*LVTSGF
Trigger: AAATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCT...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATACATCTCAATGATCTaGATTGCCCTTTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEYISMI*IALLAS
Trigger: TGATGCCAAAAGGGCAATGCAGATCATTGAGATGTA...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCTGACATCAGATATCTaGAAAACCCATCACTTGATA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALLTSDI*KTHHLI
Trigger: TATCAAGTGATGGGTTTTGCAGATATCTGATGTCAG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATACTGTTGATATTTGCTaGAGTGATTTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: CNSTTAGLKTMQINTVANTVDIC*SDFQRR
Trigger: TCTCCTTTGAAAATCACTGCAGCAAATATCAACAGT...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTACATATTTATAAGATaGCATCCACGCCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEYIFIR*HPRLLI
Trigger: GATGAGCAGGCGTGGATGGCATCTTATAAATATGTA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATACATATTTATAAGATaGCATCCACGCCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILYIFIR*HPRLLI
Trigger: GATGAGCAGGCGTGGATGGCATCTTATAAATATGTA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTGTTATAATGAATATTaGGTTCTTCTGCCACATGGA +
Preference number: 4 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGCYNEY*VLLPHG
Trigger: TCCATGTGGCAGAAGAACGCAATATTCATTATAACA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCACCTCTACGTAGGTaGCAATTTTCTTATCTGATA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIPPLRR*QFSYLI
Trigger: TATCAGATAAGAAAATTGGCACCTACGTAGAGGTGG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGTTTTGTCAACTTGCGTaGAGTGTAACTTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVFCQLA*SVTSAW
Trigger: CCATGCAGAAGTTACACTGCACGCAAGTTGACAAAA...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIDALWV*CFSLHF
Trigger: AAAATGCAAACTGAAGCAGCAAACCCACAAAGCATC...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILDALWV*CFSLHF
Trigger: AAAATGCAAACTGAAGCAGCAAACCCACAAAGCATC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIDALWV*CFSLHF
Trigger: AAAATGCAAACTGAAGCAGCAAACCCACAAAGCATC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAACCTAGTGCATGCACTTaGTATGAAATTGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEPSACT*YEIANA
Trigger: TGCATTAGCAATTTCATAGCAAGTGCATGCACTAGG...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAATTCATCTGGTGCTGTaGCCTAAAATCAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILIHLVL*PKISNL
Trigger: CAGATTACTGATTTTAGGGCACAGCACCAGATGAAT...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCAACAATTCATCTGGTaGTGTGCCCTAAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVQQFIW*CALKSV
Trigger: TACTGATTTTAGGGCACAGCACCAGATGAATTGTTG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTACAGGATTTCAAAAGCTaGTCATTCTGTTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILQDFKS*SFCFSR
Trigger: CCTAGAGAAACAGAATGAGCAGCTTTTGAAATCCTG...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGTGGACAAATATGGATaGATATTAGTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIVDKYG*ILVVAP
Trigger: AGGTGCTACCACTAATATCCATCCATATTTGTCCAC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGTGGACAAATATGGATaGATATTAGTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEVDKYG*ILVVAP
Trigger: AGGTGCTACCACTAATATCCATCCATATTTGTCCAC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGCCCATAGCTCTCATTTaGTCTGCTCTCTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVPIALI*SALFSV
Trigger: TACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGG...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATCTTTCTTGTCATTTTTaGAAGTGTCACTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHLSCHF*KCHWAR
Trigger: ACGTGCCCAGTGACACTTCCAAAAATGACAAGAAAG...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAAGTGTAACTTCTGCATaGTACTGTGTTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILSVTSA*YCVPLH
Trigger: ATGCAAAGGAACACAGTACCATGCAGAAGTTACACT...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAAGTGTAACTTCTGCATaGTACTGTGTTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLSVTSA*YCVPLH
Trigger: ATGCAAAGGAACACAGTACCATGCAGAAGTTACACT...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGATAGAAATCTTAGCCTaGTGTGCTCGCATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVIEILA*CARISL
Trigger: CAAGGAAATGCGAGCACACCAGGCTAAGATTTCTAT...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAACTTTGGACTGCTTCATaGCAAGTCTCTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTELWTAS*QVSFFL
Trigger: AAGAAAGAAAGAGACTTGCCATGAAGCAGTCCAAAG...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATACTGATCCATTTCTTTaGACTGCTTCATGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHTDPFL*TASWQV
Trigger: GACTTGCCATGAAGCAGTCCAAAGAAATGGATCAGT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAGTAATGATGAGTTTTaGCACACATACACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: FIHGVCVQKFVSESFDALSNDEF*HTYTAL
Trigger: TAGAGCAGTGTATGTGTGCCAAAACTCATCATTACT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCACATTGCTTTTCCATaGGTTATTATTGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVHIAFP*VIIGSW
Trigger: CCAAGAACCAATAATAACTCATGGAAAAGCAATGTG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGTTTCCTTGATGGCTTaGATTACATCCTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEVSLMA*ITSLKR
Trigger: CCTTTTTAAGGATGTAATTCAAGCCATCAAGGAAAC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGTTTCCTTGATGGCTTaGATTACATCCTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIVSLMA*ITSLKR
Trigger: CCTTTTTAAGGATGTAATTCAAGCCATCAAGGAAAC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGCAAATGCAGTTTCCTTaGTGGCTTGAATTACATCCT +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVQMQFP*WLELHP
Trigger: AGGATGTAATTCAAGCCATCAAGGAAACTGCATTTG...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATCAAATGCAGTTTCCTTaGTGGCTTGAATTACATCCT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHQMQFP*WLELHP
Trigger: AGGATGTAATTCAAGCCATCAAGGAAACTGCATTTG...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTGGTTCAAGTGGATGTaGTTCAAGTGCTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHWFKWM*FKCLFQ
Trigger: TTGAAACAAGCACTTGAATCACATCCACTTGAACCA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGTAGCCAAGACCGACTaGTTCATTAAAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVVAKTD*FIKRRH
Trigger: ATGTCTTCTTTTAATGAATCAGTCGGTCTTGGCTAC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATGTAGCCAAGACCGACTaGTTCATTAAAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHVAKTD*FIKRRH
Trigger: ATGTCTTCTTTTAATGAATCAGTCGGTCTTGGCTAC...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTTCTATCCTTACTTaGGGGATAAGTTCAATACCT +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTESSILT*GISSIP
Trigger: AGGTATTGAACTTATCCCTCAAGTAAGGATAGAAGA...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATATCTTCTATCCTTACTTaGGGGATAAGTTCAATACCT +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVISSILT*GISSIP
Trigger: AGGTATTGAACTTATCCCTCAAGTAAGGATAGAAGA...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTCTAGGATTTTCTCATaGGTCGACTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNSRIFS*VDFSLS
Trigger: TGACAAAGAGAAGTCGACTCATGAGAAAATCCTAGA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTCTGATGTCAGCGTCTaGATTTTGATTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCESDVSV*ILISVS
Trigger: AGAAACAGAAATCAAAATTCAGACGCTGACATCAGA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGAACACAGTTCTCCTTTaGGTAATGATGAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVNTVLL*VMMSFG
Trigger: GCCAAAACTCATCATTACTCAAAGGAGAACTGTGTT...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACGTGGCAATACTTAGATaGTTTTGCTCTCTAACAGTG +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNVAILR*FCSLTV
Trigger: CACTGTTAGAGAGCAAAATCATCTAAGTATTGCCAC...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATTTCAAACTAGAACTTaGAGTATCAAGAATGCCCAC +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILFQTRT*SIKNAH
Trigger: GTGGGCATTCTTGATACTTCAAGTTCTAGTTTGAAA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTTTCAAACTAGAACTTaGAGTATCAAGAATGCCCAC +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIFQTRT*SIKNAH
Trigger: GTGGGCATTCTTGATACTTCAAGTTCTAGTTTGAAA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAACTAAAATCAGTAATCTaGTTAGTTCTAGACTACCGG +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTELKSVI*LVLDYR
Trigger: CCGGTAGTCTAGAACTAATCAGATTACTGATTTTAG...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCTCTTGGATTTGATTTaGTTTGATGATGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVLLDLI*FDDEKP
Trigger: TGGCTTCTCATCATCAAATCAAATCAAATCCAAGAG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAGTATCTGTCAAAAACTaGTCCTTCTTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEVSVKN*SFLQKG
Trigger: TCCTTTTTGCAAGAAGGAGCAGTTTTTGACAGATAC...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGTATCTGTCAAAAACTaGTCCTTCTTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIVSVKN*SFLQKG
Trigger: TCCTTTTTGCAAGAAGGAGCAGTTTTTGACAGATAC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGAGGCCTTCTACCCATTaGTTAGTTACTTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWRPSTH*LVTSGF
Trigger: AAATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCT...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTACATCTCAATGATCTaGATTGCCCTTTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWYISMI*IALLAS
Trigger: TGATGCCAAAAGGGCAATGCAGATCATTGAGATGTA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAAATATTGCGTTCTTCTaGCACATGGAAACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILNIAFF*HMETLK
Trigger: TTTCAAGGTTTCCATGTGGCAGAAGAACGCAATATT...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGAATATTGCGTTCTTCTaGCACATGGAAACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCENIAFF*HMETLK
Trigger: TTTCAAGGTTTCCATGTGGCAGAAGAACGCAATATT...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCCACCTCTACGTAGGTaGCAATTTTCTTATCTGATA +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHPPLRR*QFSYLI
Trigger: TATCAGATAAGAAAATTGGCACCTACGTAGAGGTGG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGACAATTTTGTCAACTTaGGTGCAGTGTAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVTILST*VQCNFC
Trigger: GCAGAAGTTACACTGCACGCAAGTTGACAAAATTGT...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCTCTTTGTCATACTGTaGCACAATTTTGTCAACTTG +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVLFVIL*HNFVNL
Trigger: CAAGTTGACAAAATTGTGGCACAGTATGACAAAGAG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATACTCTTTGTCATACTGTaGCACAATTTTGTCAACTTG +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVILFVIL*HNFVNL
Trigger: CAAGTTGACAAAATTGTGGCACAGTATGACAAAGAG...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATCAATGGTTGGACTCTaGCTTACTGGAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLSMVGL*LTGIVN
Trigger: ATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTTTTCCTAGTGCATaGACTTGCTATGAAATTGCT +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTESFPSA*TCYEIA
Trigger: AGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGA...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATATTCATCTGGTGCTGTaGCCTAAAATCAGTAATCTG +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHIHLVL*PKISNL
Trigger: CAGATTACTGATTTTAGGGCACAGCACCAGATGAAT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGAACACATGCTTTTGTTaGACATTTGAGTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRNTCFC*TFELCV
Trigger: TACACACAACTCAAATGTGCAACAAAAGCATGTGTT...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGTTATTATTGGTTCTTaGTCTTCACCTTTTCCATCC +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILVIIGS*SSPFPS
Trigger: GGATGGAAAAGGTGAAGACCAAGAACCAATAATAAC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGTGGACAAATATGGATaGATATTAGTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHVDKYG*ILVVAP
Trigger: AGGTGCTACCACTAATATCCATCCATATTTGTCCAC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGAGTGTAACTTCTGCATaGTACTGTGTTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWSVTSA*YCVPLH
Trigger: ATGCAAAGGAACACAGTACCATGCAGAAGTTACACT...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLNSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGAACAGCTTTCATCCATaGAGTTTGTGTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: GNKINSFHPWSLCSEVCENSFHP*SLCSEV
Trigger: AACTTCTGAACACAAACTCCATGGATGAAAGCTGTT...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCATTCCAAGTCTCTCTaGTTTCAGATATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVHSKSL*FQISSC
Trigger: ACAAGATGATATCTGAAACCAGAGAGACTTGGAATG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATACATTCCAAGTCTCTCTaGTTTCAGATATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIHSKSL*FQISSC
Trigger: ACAAGATGATATCTGAAACCAGAGAGACTTGGAATG...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTGTATTATCAATGGTTaGACTCTGCCTTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDICIING*TLPYWN
Trigger: ATTCCAGTAAGGCAGAGTCCAACCATTGATAATACA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAAAGTTGTATTATCAATaGTTGGACTCTGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLKLYYQ*LDSALL
Trigger: CAGTAAGGCAGAGTCCAACCATTGATAATACAACTT...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAAAGTTGTATTATCAATaGTTGGACTCTGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILKLYYQ*LDSALL
Trigger: CAGTAAGGCAGAGTCCAACCATTGATAATACAACTT...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGTTTCCTTGATGGCTTaGATTACATCCTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVVSLMA*ITSLKR
Trigger: CCTTTTTAAGGATGTAATTCAAGCCATCAAGGAAAC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR TCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTCTGATGTCAGCGTCTaGATTTTGATTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHSDVSV*ILISVS
Trigger: AGAAACAGAAATCAAAATTCAGACGCTGACATCAGA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR TCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTCTGATGTCAGCGTCTaGATTTTGATTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWSDVSV*ILISVS
Trigger: AGAAACAGAAATCAAAATTCAGACGCTGACATCAGA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTGTGTTGGTCATAAATaGCAATTTCATCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: NIDGIIIFSALFRGTHRICVGHK*QFHPVF
Trigger: AAACACTGGATGAAATTGGCATTTATGACCAACACA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATGTGTTGGTCATAAATaGCAATTTCATCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLCVGHK*QFHPVF
Trigger: AAACACTGGATGAAATTGGCATTTATGACCAACACA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTGTGTTGGTCATAAATaGCAATTTCATCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMCVGHK*QFHPVF
Trigger: AAACACTGGATGAAATTGGCATTTATGACCAACACA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCTGACATCAGATATCTaGAAAACCCATCACTTGATA +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHLTSDI*KTHHLI
Trigger: TATCAAGTGATGGGTTTTGCAGATATCTGATGTCAG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTGTACTGTTGATATTTaGTGCAGTGATTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FGQGNAILKLLNRSQSDICTVDI*CSDFQR
Trigger: CCTTTGAAAATCACTGCAGCAAATATCAACAGTACA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGTGTTATAATGAATATTaGGTTCTTCTGCCACATGGA +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVCYNEY*VLLPHG
Trigger: TCCATGTGGCAGAAGAACGCAATATTCATTATAACA...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCTCTTTGTCATACTGTaGCACAATTTTGTCAACTTG +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHLFVIL*HNFVNL
Trigger: CAAGTTGACAAAATTGTGGCACAGTATGACAAAGAG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTCGCCTTTCCCGTTCTaGTTTATTCTTGATAGATTT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWSPFPF*FILDRF
Trigger: AAATCTATCAAGAATAAAGCAGAACGGGAAAGGCGA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATAGGTGCTTGTGTATCATaGAAACATAGTTCTAGTATT +
Preference number: 4 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIGACVS*KHSSSI
Trigger: AATACTAGAACTATGTTTGCATGATACACAAGCACC...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGAACACATGCTTTTGTTaGACATTTGAGTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVNTCFC*TFELCV
Trigger: TACACACAACTCAAATGTGCAACAAAAGCATGTGTT...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATCCATGAGTTATTATTaGTTCTTGGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILSMSYY*FLVFTF
Trigger: AAAGGTGAAGACCAAGAACCAATAATAACTCATGGA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACCATTCCAAGTCTCTCTaGTTTCAGATATCATCTTGT +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNHSKSL*FQISSC
Trigger: ACAAGATGATATCTGAAACCAGAGAGACTTGGAATG...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACAGTAATGATGAGTTTTaGCACACATACACTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNSNDEF*HTYTAL
Trigger: TAGAGCAGTGTATGTGTGCCAAAACTCATCATTACT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATGGATTAGTCTTTATTaGTGCTTGTGTATCATGCAA +
Preference number: 4 (lower is better)
Translates to: HHKGELFTPSSFTCDGILWISLY*CLCIMQ
Trigger: TTGCATGATACACAAGCACCAATAAAGACTAATCCA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAAAATATAAATGCTTATaGTGGCCTAGGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEKYKCL*WPRRMK
Trigger: TTTCATCCTCCTAGGCCACCATAAGCATTTATATTT...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTGTGTTGGTCATAAATaGCAATTTCATCCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHCVGHK*QFHPVF
Trigger: AAACACTGGATGAAATTGGCATTTATGACCAACACA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATACTGTTGATATTTGCTaGAGTGATTTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHTVDIC*SDFQRR
Trigger: TCTCCTTTGAAAATCACTGCAGCAAATATCAACAGT...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATACTGTTGATATTTGCTaGAGTGATTTTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHTVDIC*SDFQRR
Trigger: TCTCCTTTGAAAATCACTGCAGCAAATATCAACAGT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTGTACTGTTGATATTTaGTGCAGTGATTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHCTVDI*CSDFQR
Trigger: CCTTTGAAAATCACTGCAGCAAATATCAACAGTACA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTGTTATAATGAATATTaGGTTCTTCTGCCACATGGA +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWCYNEY*VLLPHG
Trigger: TCCATGTGGCAGAAGAACGCAATATTCATTATAACA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATGGTGCTTGTGTATCATaGAAACATAGTTCTAGTATT +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHGACVS*KHSSSI
Trigger: AATACTAGAACTATGTTTGCATGATACACAAGCACC...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACAGAATCTGCATGTTTTaGATCATTTGGGTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNRICMF*IIWVKN
Trigger: GTTTTTCACCCAAATGATGCAAAACATGCAGATTCT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR GCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATAGAATCTGCATGTTTTaGATCATTTGGGTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHRICMF*IIWVKN
Trigger: GTTTTTCACCCAAATGATGCAAAACATGCAGATTCT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CCA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTCCATGAGTTATTATTaGTTCTTGGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWSMSYY*FLVFTF
Trigger: AAAGGTGAAGACCAAGAACCAATAATAACTCATGGA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CCA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATAAATATAAATGCTTATaGTGGCCTAGGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHKYKCL*WPRRMK
Trigger: TTTCATCCTCCTAGGCCACCATAAGCATTTATATTT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS GCA 90 bp GAAATTGTCTTTTCCTGTCACTTTGCCTGGAGCTGCTGCCGGGGATaGGGCGACGGCCGCTGCCTGGAGACCCAGTGTGTACGCGCGTGT +
Preference number: 5 (lower is better)
Translates to: EIVFSCHFAWSCCRG*GDGRCLETQCVRAC
Trigger: ACACGCGCGTACACACTGGGTCTCCAGGCAGCGGCCGTCGCCGCATCCCCGGCAGCAGCTCCAGGCAAAGTGACAGGAAAAGACAATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000437503.5
CDS TCA 90 bp TCTTGGCTTCCACACCAGAGGCCAGGGCAGCCGTGGTGGTTGGTCTaGGCTCAGAGCTACTCTGAGGGGTCACATTTGCTTTGGCGGTGT +
Preference number: 5 (lower is better)
Translates to: SWLPHQRPGQPWWLV*AQSYSEGSHLLWRC
Trigger: ACACCGCCAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGGCTGCCCTGGCCTCTGGTGTGGAAGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS TCA 90 bp GAGGCCAGGGCAGCCGTGGTGGTTGGTCTGAGCTCAGAGCTACTCTaGGGGGTCACATTTGCTTTGGCGGTGTTGGCCTTTCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: EARAAVVVGLSSELL*GVTFALAVLAFPFL
Trigger: CAAGAAAGGAAAGGCCAACACCGCCAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGGCTGCCCTGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 90 bp ACCTTTCTTGGCTTCCACACCAGAGGCCAGGGCAGCCGTGGTGGTTaGTCTGAGCTCAGAGCTACTCTGAGGGGTCACATTTGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: TFLGFHTRGQGSRGG*SELRATLRGHICFG
Trigger: GCCAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCTCAGACCAACCACCACGGCTGCCCTGGCCTCTGGTGTGGAAGCCAAGAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 90 bp TGCTGCTCGTGGGCATTGATGAGTAGCTTTTTCAGCAGCTCACACTaGTGGCTGAGGTGCAGGTCTCGGATTTCTTGCTCCTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: CCSWALMSSFFSSSH*WLRCRSRISCSSAL
Trigger: CAGTGCTGAGGAGCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 90 bp TGCTCGTGGGCATTGATGAGTAGCTTTTTCAGCAGCTCACACTGCTaGCTGAGGTGCAGGTCTCGGATTTCTTGCTCCTCAGCACTGTGG +
Preference number: 5 (lower is better)
Translates to: CSWALMSSFFSSSHC*LRCRSRISCSSALW
Trigger: CCACAGTGCTGAGGAGCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAAAAAGCTACTCATCAATGCCCACGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 90 bp GTCCTTTCACGCAGAGTCCCACCCCTCCGCTACAAAGTGAGAGGCTaGGCAAACAGTGCCCACAGCCACAACAAAATATCCAGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: VLSRRVPPLRYKVRG*ANSAHSHNKISRES
Trigger: ACTCTCTCTGGATATTTTGTTGTGGCTGTGGGCACTGTTTGCCCAGCCTCTCACTTTGTAGCGGAGGGGTGGGACTCTGCGTGAAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416836.5
CDS CCA 90 bp AAGGAGTCAGTAGGATTTCAACCTCACTCAGTCAGAAACAGGCACTaGAGAGCACGCCTGAGGCAGGTGGAGAACTTCAGAGGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: KESVGFQPHSVRNRH*RARLRQVENFRGSH
Trigger: GTGACTGCCTCTGAAGTTCTCCACCTGCCTCAGGCGTGCTCTCCAGTGCCTGTTTCTGACTGAGTGAGGTTGAAATCCTACTGACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416836.5
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGTGTCGATATCCGGCTaGGAGGCCATCAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVVSISG*EAIKRE
Trigger: CTCCCGCTTGATGGCCTCCAAGCCGGATATCGACAC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS GCA 90 bp TCCTTGCTTTCCCTGTCATGGGACAGTTTCAGCTGCTGGGTTTGCTaGTCGTGGGCATTGATGAGTAGCTTTTTCAGCAGCTCACACTGC +
Preference number: 5 (lower is better)
Translates to: SLLSLSWDSFSCWVC*SWALMSSFFSSSHC
Trigger: GCAGTGTGAGCTGCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 90 bp GCTCGCATTTCCTTGCTTTCCCTGTCATGGGACAGTTTCAGCTGCTaGGTTTGCTGCTCGTGGGCATTGATGAGTAGCTTTTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ARISLLSLSWDSFSC*VCCSWALMSSFFSS
Trigger: GCTGCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAAGGAAATGCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS-3UTR CAA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCGGGGTCACATTTGCTTaGGCGGTGTTGGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCGVTFA*AVLAFP
Trigger: AGGAAAGGCCAACACCGCCAAAGCAAATGTGACCCC...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS GCA 90 bp GCATTGATGAGTAGCTTTTTCAGCAGCTCACACTGCTGGCTGAGGTaGAGGTCTCGGATTTCTTGCTCCTCAGCACTGTGGGTATTGATC +
Preference number: 5 (lower is better)
Translates to: ALMSSFFSSSHCWLR*RSRISCSSALWVLI
Trigger: GATCAATACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAAAAAGCTACTCATCAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 90 bp GGTTTATTTCCCTCATTTCGAAGGGAAATGTGTCGATATCCGGCTTaGAGGCCATCAAGCGGGAGGATCCTCTGGCCAATCAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GLFPSFRREMCRYPA*RPSSGRILWPISLL
Trigger: CAACAAGCTGATTGGCCAGAGGATCCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACACATTTCCCTTCGAAATGAGGGAAATAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTTCCATGCGCTCCTCTaGGCTTTGGTGGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSFHALL*ALVAWL
Trigger: GAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS GCA 90 bp CGTGGTGGTTGGTCTGAGCTCAGAGCTACTCTGAGGGGTCACATTTaGTTTGGCGGTGTTGGCCTTTCCTTTCTTGTCATTTTTGGAAGT +
Preference number: 5 (lower is better)
Translates to: RGGWSELRATLRGHI*FGGVGLSFLVIFGS
Trigger: ACTTCCAAAAATGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAAATGTGACCCCTCAGAGTAGCTCTGAGCTCAGACCAACCACCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 90 bp TTCAGCAGCTCACACTGCTGGCTGAGGTGCAGGTCTCGGATTTCTTaGTCCTCAGCACTGTGGGTATTGATCATTTCTGACCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: FSSSHCWLRCRSRIS*SSALWVLIISDHSF
Trigger: AAAGGAATGGTCAGAAATGATCAATACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS GCA 90 bp ATTTCCTTGCTTTCCCTGTCATGGGACAGTTTCAGCTGCTGGGTTTaGTGCTCGTGGGCATTGATGAGTAGCTTTTTCAGCAGCTCACAC +
Preference number: 5 (lower is better)
Translates to: ISLLSLSWDSFSCWV*CSWALMSSFFSSSH
Trigger: GTGTGAGCTGCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAAGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCCCCGACCGAATACTGTaGATGAGGGAGCATTCTAGC +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVPDRIL*MREHSS
Trigger: GCTAGAATGCTCCCTCATCAACAGTATTCGGTCGGG...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCAGGTCTCGGATTTCTaGCTCCTCAGCACTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSQVSDF*LLSTVG
Trigger: ACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCAGCACCTGTCCTTCCTaGCCTTCACTTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSSTCPS*PSLLHV
Trigger: GACATGGAGAAGTGAAGGCAAGGAAGGACAGGTGCT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGTCATTGGACTGACGTaGTTGGCCCTGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVVIGLT*LALKLC
Trigger: ACACAACTTCAGGGCCAACAACGTCAGTCCAATGAC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCCACATGGAAACCTaGAAACTTTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVCHMET*KLYRLG
Trigger: GCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGCA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS GCA 90 bp CTGCTTCAGTTTGCATTTTGGAGTTTCATACTACTGTTGCTGGTCTaGGGTCCATCTCGGCTTCCAATTTCACCATCTGCTGCATCTCCT +
Preference number: 5 (lower is better)
Translates to: LLQFAFWSFILLLLV*GPSRLPISPSAASP
Trigger: AGGAGATGCAGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAGTATGAAACTCCAAAATGCAAACTGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 90 bp TGGGTTTGCTGCTTCAGTTTGCATTTTGGAGTTTCATACTACTGTTaGTGGTCTGCGGTCCATCTCGGCTTCCAATTTCACCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: WVCCFSLHFGVSYYC*WSAVHLGFQFHHLL
Trigger: CAGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAGTATGAAACTCCAAAATGCAAACTGAAGCAGCAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCAGAGCAGCCAAGATTTaGGGATCCTTTGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVRAAKI*GSFGMA
Trigger: AGCCATACCAAAGGATCCCAAAATCTTGGCTGCTCT...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCGTCATTGGACTGACGTaGTTGGCCCTGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSVIGLT*LALKLC
Trigger: ACACAACTTCAGGGCCAACAACGTCAGTCCAATGAC...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTGCCACATGGAAACCTaGAAACTTTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLCHMET*KLYRLG
Trigger: GCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGCA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTGCCACATGGAAACCTaGAAACTTTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSCHMET*KLYRLG
Trigger: GCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGCA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCAGGTCTCGGATTTCTaGCTCCTCAGCACTGTGGGT +
Preference number: 5 (lower is better)
Translates to: HLLECVLGANTLDECYACQVSDF*LLSTVG
Trigger: ACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTGGGAGCAAATACTCTaGACGAGTGTTATGCGTGTT +
Preference number: 5 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCWEQIL*TSVMRV
Trigger: AACACGCATAACACTCGTCAAGAGTATTTGCTCCCA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS GCA 90 bp TTGGCTGATGGCTTTGCTATTTTCCATAGAAATCTTAGCCTGGTGTaGTCGCATTTCCTTGCTTTCCCTGTCATGGGACAGTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LADGFAIFHRNLSLV*SHFLAFPVMGQFQL
Trigger: CAGCTGAAACTGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCCATCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 90 bp GTTTGCTGCTTCAGTTTGCATTTTGGAGTTTCATACTACTGTTGCTaGTCTGCGGTCCATCTCGGCTTCCAATTTCACCATCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: VCCFSLHFGVSYYCC*SAVHLGFQFHHLLH
Trigger: ATGCAGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAGTATGAAACTCCAAAATGCAAACTGAAGCAGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 90 bp CTGGGCAAACAGTGCCCACAGCCACAACAAAATATCCAGAGAGAGTaGCTGAGAGAGACTCTTTCAACTACCCTAAGTCGAACAACAAAT +
Preference number: 5 (lower is better)
Translates to: LGKQCPQPQQNIQRE*LRETLSTTLSRTTN
Trigger: ATTTGTTGTTCGACTTAGGGTAGTTGAAAGAGTCTCTCTCAGCCACTCTCTCTGGATATTTTGTTGTGGCTGTGGGCACTGTTTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416836.5
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCCCGACCGAATACTGTaGATGAGGGAGCATTCTAGC +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGPDRIL*MREHSS
Trigger: GCTAGAATGCTCCCTCATCAACAGTATTCGGTCGGG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTCCCGACCGAATACTGTaGATGAGGGAGCATTCTAGC +
Preference number: 5 (lower is better)
Translates to: HLLECVLGANTLDECYACPDRIL*MREHSS
Trigger: GCTAGAATGCTCCCTCATCAACAGTATTCGGTCGGG...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCATGAGTATTTTTCTTTaGAGGTCATTGGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCMSIFL*RSLGDG
Trigger: GCCATCCCCCAATGACCTCAAAAGAAAAATACTCAT...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGTGAGCTTCCTCCTCTaGGTCAGCACTTTCGATCTC +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGVSFLL*VSTFDL
Trigger: GAGATCGAAAGTGCTGACCAAGAGGAGGAAGCTCAC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCTCATGAAATCTGGTTaGAGAAGGTACCCGCACGAT +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSLMKSG*RRYPHD
Trigger: ATCGTGCGGGTACCTTCTCAAACCAGATTTCATGAG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAGTGTCGATATCCGGCTaGGAGGCCATCAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLVSISG*EAIKRE
Trigger: CTCCCGCTTGATGGCCTCCAAGCCGGATATCGACAC...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAGTGTCGATATCCGGCTaGGAGGCCATCAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEVSISG*EAIKRE
Trigger: CTCCCGCTTGATGGCCTCCAAGCCGGATATCGACAC...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTTTGCTTTGGCGGTGTaGGCCTTTCCTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSFALAV*AFPFLS
Trigger: TGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAAA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTCAGCACTGTGGGTATaGATCATTTCTGACCATTCC +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVSALWV*IISDHS
Trigger: GGAATGGTCAGAAATGATCAATACCCACAGTGCTGA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTCAGGTCTCGGATTTCTaGCTCCTCAGCACTGTGGGT +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGQVSDF*LLSTVG
Trigger: ACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTG...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTGCTGCTCGTGGGCATaGATGAGTAGCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALCCSWA*MSSFFS
Trigger: GCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTTTCAGCTGCTGGGTTaGCTGCTCGTGGGCATTGAT +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIFQLLG*LLVGID
Trigger: ATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTGTGCTCGCATTTCCTaGCTTTCCCTGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADCARIS*LSLSWD
Trigger: GTCCCATGACAGGGAAAGCAAGGAAATGCGAGCACA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGTTCCATGCGCTCCTCTaGGCTTTGGTGGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRFHALL*ALVAWL
Trigger: GAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAA...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTTCCATGCGCTCCTCTaGGCTTTGGTGGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALFHALL*ALVAWL
Trigger: GAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS TCA 90 bp TGCCTTCACTTCTCCATGTCAGAAAGAAGCCAAACTCATCCACTTTaGAGAGGCAGTTGGGTTCAAACACAAAGGATTCCTCCTCGTATC +
Preference number: 5 (lower is better)
Translates to: CLHFSMSERSQTHPL*RGSWVQTQRIPPRI
Trigger: GATACGAGGAGGAATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGGCTTCTTTCTGACATGGAGAAGTGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCCAAACTCATCCACTTaGAAGAGGCAGTTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALPNSST*KRQLGS
Trigger: TGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATAGCACCTGTCCTTCCTaGCCTTCACTTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: CNSTTAGLKTMQINTVANSTCPS*PSLLHV
Trigger: GACATGGAGAAGTGAAGGCAAGGAAGGACAGGTGCT...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCAGGCCTTCTACCCATaGCTTAGTTACTTCTGGATT +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSQAFYP*LSYFWI
Trigger: AATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCTG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGTCATTGGACTGACGTaGTTGGCCCTGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCVIGLT*LALKLC
Trigger: ACACAACTTCAGGGCCAACAACGTCAGTCCAATGAC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTTCATCCAGTGTTTCTaGAGGCATGTCATTGGACTG +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSFIQCF*RHVIGL
Trigger: CAGTCCAATGACATGCCTCAAGAAACACTGGATGAA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTTTCTTTTGAGGTCATaGGGGGATGGCAAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIFLLRS*GDGKAL
Trigger: CAGGGCTTTGCCATCCCCCAATGACCTCAAAAGAAA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGTGTCGATATCCGGCTaGGAGGCCATCAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWVSISG*EAIKRE
Trigger: CTCCCGCTTGATGGCCTCCAAGCCGGATATCGACAC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTCTGAGGGGTCACATTaGCTTTGGCGGTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALSEGSH*LWRCWP
Trigger: AGGCCAACACCGCCAAAGCAAATGTGACCCCTCAGA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAGTTCAATACCTTTCTaGGCTTCCACACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGSSIPF*ASTPEA
Trigger: GGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAACT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGCAGGTCTCGGATTTCTaGCTCCTCAGCACTGTGGGT +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALQVSDF*LLSTVG
Trigger: ACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTG...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATTTTCAGCTGCTGGGTTaGCTGCTCGTGGGCATTGAT +
Preference number: 5 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDFQLLG*LLVGID
Trigger: ATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAA...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTTTCAGCTGCTGGGTTaGCTGCTCGTGGGCATTGAT +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGFQLLG*LLVGID
Trigger: ATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTGCTCTTGGCTGATGGCTTaGCTATTTTCCATAGAAATC +
Preference number: 5 (lower is better)
Translates to: ALVAWLNSQRNTFSCTVCSWLMA*LFSIEI
Trigger: GATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGA...GCAGACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTTCCATGCGCTCCTCTaGGCTTTGGTGGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIFHALL*ALVAWL
Trigger: GAGCCATGCCACCAAAGCCAAGAGGAGCGCATGGAA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATCTGAAGCCTTCTaGACGCTATTTGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSSSEAF*TLFATA
Trigger: AGCTGTTGCAAATAGCGTCAAGAAGGCTTCAGATGA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000414679.6
CDS TCA 90 bp GCATGTCATTGGACTGACGTTGTTGGCCCTGAAGTTGTGTATGATTaGTCTCAGGCCTTCTACCCATTGCTTAGTTACTTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: ACHWTDVVGPEVVYD*SQAFYPLLSYFWIF
Trigger: GAAAATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS TCA 90 bp GTCTCGGATTTCTTGCTCCTCAGCACTGTGGGTATTGATCATTTCTaGCCATTCCTTTGTGTGCTGTGCTACAATCTCTTTGACCTTAGA +
Preference number: 5 (lower is better)
Translates to: VSDFLLLSTVGIDHF*PFLCVLCYNLFDLR
Trigger: TCTAAGGTCAAAGAGATTGTAGCACAGCACACAAAGGAATGGTCAGAAATGATCAATACCCACAGTGCTGAGGAGCAAGAAATCCGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 90 bp TTATCTTGGCTGATGGCTTTGCTATTTTCCATAGAAATCTTAGCCTaGTGTGCTCGCATTTCCTTGCTTTCCCTGTCATGGGACAGTTTC +
Preference number: 5 (lower is better)
Translates to: LSWLMALLFSIEILA*CARISLLSLSWDSF
Trigger: GAAACTGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 90 bp TGCAGATGTTTTTCATTTCCCAAACTAGTTCCTCCAGTGTCCCTCTaGTTCCCAGAGCTGGTTAGTCTAGTGATGCAACTTGAATCTAAG +
Preference number: 5 (lower is better)
Translates to: CRCFSFPKLVPPVSL*FPELVSLVMQLESK
Trigger: CTTAGATTCAAGTTGCATCACTAGACTAACCAGCTCTGGGAACCAGAGGGACACTGGAGGAACTAGTTTGGGAAATGAAAAACATCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCAAAAACTGCTCCTTCTaGCAAAAAGGAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSKNCSF*QKGGNF
Trigger: GAAGTTCCCTCCTTTTTGCAAGAAGGAGCAGTTTTT...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCCAAACTCATCCACTTaGAAGAGGCAGTTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGPNSST*KRQLGS
Trigger: TGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAGCACCTGTCCTTCCTaGCCTTCACTTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALSTCPS*PSLLHV
Trigger: GACATGGAGAAGTGAAGGCAAGGAAGGACAGGTGCT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTAGAGCAGCCAAGATTTaGGGATCCTTTGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: HLLECVLGANTLDECYACRAAKI*GSFGMA
Trigger: AGCCATACCAAAGGATCCCAAAATCTTGGCTGCTCT...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCAGGCCTTCTACCCATaGCTTAGTTACTTCTGGATT +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALQAFYP*LSYFWI
Trigger: AATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCTG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTGGACTGACGTTGTaGGCCCTGAAGTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGIGLTL*ALKLCM
Trigger: CATACACAACTTCAGGGCCAACAACGTCAGTCCAAT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTTTCTTTTGAGGTCATaGGGGGATGGCAAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: CNSTTAGLKTMQINTVANFLLRS*GDGKAL
Trigger: CAGGGCTTTGCCATCCCCCAATGACCTCAAAAGAAA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTGCCACATGGAAACCTaGAAACTTTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CNSTTAGLKTMQINTVANCHMET*KLYRLG
Trigger: GCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGCA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCTCATGAAATCTGGTTaGAGAAGGTACCCGCACGAT +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCLMKSG*RRYPHD
Trigger: ATCGTGCGGGTACCTTCTCAAACCAGATTTCATGAG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCTCTGGCCAATCAGCTaGTTGTTATCATCATACACA +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSLWPIS*LLSSYT
Trigger: TGTGTATGATGATAACAACAAGCTGATTGGCCAGAG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGCCCATAGCTCTCATTaGGTCTGCTCTCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCAHSSH*VCSLFC
Trigger: ACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGGC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCCCTTTCTTGTCATTTTaGGAAGTGTCACTGGGCACG +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCPFLSF*EVSLGT
Trigger: CGTGCCCAGTGACACTTCCAAAAATGACAAGAAAGG...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTTGGCCTTTCCTTTCTaGTCATTTTTGGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVLAFPF*SFLEVS
Trigger: TGACACTTCCAAAAATGACAAGAAAGGAAAGGCCAA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTTTGCTTTGGCGGTGTaGGCCTTTCCTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCFALAV*AFPFLS
Trigger: TGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAAA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTTTGCTTTGGCGGTGTaGGCCTTTCCTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: HLLECVLGANTLDECYACFALAV*AFPFLS
Trigger: TGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAAA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGGGGTCACATTTGCTTaGGCGGTGTTGGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILGVTFA*AVLAFP
Trigger: AGGAAAGGCCAACACCGCCAAAGCAAATGTGACCCC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTCTGAGGGGTCACATTaGCTTTGGCGGTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCESEGSH*LWRCWP
Trigger: AGGCCAACACCGCCAAAGCAAATGTGACCCCTCAGA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTCTGAGGGGTCACATTaGCTTTGGCGGTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRISEGSH*LWRCWP
Trigger: AGGCCAACACCGCCAAAGCAAATGTGACCCCTCAGA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTCTGAGGGGTCACATTaGCTTTGGCGGTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISEGSH*LWRCWP
Trigger: AGGCCAACACCGCCAAAGCAAATGTGACCCCTCAGA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTACTGTGCCACAATTTaGTCAACTTGCGTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALYCATI*STCVQC
Trigger: ACACTGCACGCAAGTTGACAAAATTGTGGCACAGTA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTTTTCTGACCATTCCTTaGTGTGCTGTGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLFLTIP*CAVLQS
Trigger: AGATTGTAGCACAGCACACAAAGGAATGGTCAGAAA...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTACAGGTCTCGGATTTCTaGCTCCTCAGCACTGTGGGT +
Preference number: 5 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLQVSDF*LLSTVG
Trigger: ACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTG...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCAGTTTCATACTACTGTaGCTGGTCTGCGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCSFILL*LVCGPS
Trigger: AGATGGACCGCAGACCAGCAACAGTAGTATGAAACT...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCGTTTGCTGCTTCAGTTaGCATTTTGGAGTTTCATAC +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVVCCFS*HFGVSY
Trigger: GTATGAAACTCCAAAATGCAAACTGAAGCAGCAAAC...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVLYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCCATCACAAAGGAGAGTaGTTCACACCAAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSHHKGE*FTPSSF
Trigger: AAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTGGGAGCAAATACTCTaGACGAGTGTTATGCGTGTT +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALWEQIL*TSVMRV
Trigger: AACACGCATAACACTCGTCAAGAGTATTTGCTCCCA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTCCTTCGCCTTGCGTTaGGGACACTGCATGACAGGA +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISFALR*GHCMTG
Trigger: TCCTGTCATGCAGTGTCCCAAACGCAAGGCGAAGGA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTATGCATCTCCTTCGCCTaGCGTTTGGGACACTGCATG +
Preference number: 5 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLCISFA*RLGHCM
Trigger: CATGCAGTGTCCCAAACGCAAGGCGAAGGAGATGCA...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CAA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAAAGCACCTGTCCTTCCTaGCCTTCACTTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: SILMVSSFSPLCSEEHTESTCPS*PSLLHV
Trigger: GACATGGAGAAGTGAAGGCAAGGAAGGACAGGTGCT...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCCGACCGAATACTGTaGATGAGGGAGCATTCTAGC +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIPDRIL*MREHSS
Trigger: GCTAGAATGCTCCCTCATCAACAGTATTCGGTCGGG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTAGAGCAGCCAAGATTTaGGGATCCTTTGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGRAAKI*GSFGMA
Trigger: AGCCATACCAAAGGATCCCAAAATCTTGGCTGCTCT...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCAGGCCTTCTACCCATaGCTTAGTTACTTCTGGATT +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGQAFYP*LSYFWI
Trigger: AATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCTG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTTGTTGGCCCTGAAGTaGTGTATGATTGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADLLALK*CMIDLR
Trigger: CCTGAGATCAATCATACACAACTTCAGGGCCAACAA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTTGTTGGCCCTGAAGTaGTGTATGATTGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLLALK*CMIDLR
Trigger: CCTGAGATCAATCATACACAACTTCAGGGCCAACAA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATATTGGACTGACGTTGTaGGCCCTGAAGTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDIGLTL*ALKLCM
Trigger: CATACACAACTTCAGGGCCAACAACGTCAGTCCAAT...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTTCATCCAGTGTTTCTaGAGGCATGTCATTGGACTG +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCFIQCF*RHVIGL
Trigger: CAGTCCAATGACATGCCTCAAGAAACACTGGATGAA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCTTCCATGAGTTATTATaGGTTCTTGGTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVFHELL*VLGLHL
Trigger: AAGGTGAAGACCAAGAACCAATAATAACTCATGGAA...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTTTCTTTTGAGGTCATaGGGGGATGGCAAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALFLLRS*GDGKAL
Trigger: CAGGGCTTTGCCATCCCCCAATGACCTCAAAAGAAA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCGTGAGCTTCCTCCTCTaGGTCAGCACTTTCGATCTC +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIVSFLL*VSTFDL
Trigger: GAGATCGAAAGTGCTGACCAAGAGGAGGAAGCTCAC...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGTGAGCTTCCTCCTCTaGGTCAGCACTTTCGATCTC +
Preference number: 5 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVVSFLL*VSTFDL
Trigger: GAGATCGAAAGTGCTGACCAAGAGGAGGAAGCTCAC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGTGAGCTTCCTCCTCTaGGTCAGCACTTTCGATCTC +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIVSFLL*VSTFDL
Trigger: GAGATCGAAAGTGCTGACCAAGAGGAGGAAGCTCAC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGTGAGCTTCCTCCTCTaGGTCAGCACTTTCGATCTC +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEVSFLL*VSTFDL
Trigger: GAGATCGAAAGTGCTGACCAAGAGGAGGAAGCTCAC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATCTCATGAAATCTGGTTaGAGAAGGTACCCGCACGAT +
Preference number: 5 (lower is better)
Translates to: CNSTTAGLKTMQINTVANLMKSG*RRYPHD
Trigger: ATCGTGCGGGTACCTTCTCAAACCAGATTTCATGAG...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTGCCCATAGCTCTCATTaGGTCTGCTCTCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGAHSSH*VCSLFC
Trigger: ACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGGC...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATCCTTTCTTGTCATTTTaGGAAGTGTCACTGGGCACG +
Preference number: 5 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDPFLSF*EVSLGT
Trigger: CGTGCCCAGTGACACTTCCAAAAATGACAAGAAAGG...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACGGGGTCACATTTGCTTaGGCGGTGTTGGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNGVTFA*AVLAFP
Trigger: AGGAAAGGCCAACACCGCCAAAGCAAATGTGACCCC...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGGGGTCACATTTGCTTaGGCGGTGTTGGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWGVTFA*AVLAFP
Trigger: AGGAAAGGCCAACACCGCCAAAGCAAATGTGACCCC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTCTGAGGGGTCACATTaGCTTTGGCGGTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHSEGSH*LWRCWP
Trigger: AGGCCAACACCGCCAAAGCAAATGTGACCCCTCAGA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGAGTTCAATACCTTTCTaGGCTTCCACACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRSSIPF*ASTPEA
Trigger: GGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAACT...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAGTTCAATACCTTTCTaGGCTTCCACACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALSSIPF*ASTPEA
Trigger: GGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAACT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTCAGCACTGTGGGTATaGATCATTTCTGACCATTCC +
Preference number: 5 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADSALWV*IISDHS
Trigger: GGAATGGTCAGAAATGATCAATACCCACAGTGCTGA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGCTGCTCGTGGGCATaGATGAGTAGCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALCCSWA*MSSFFS
Trigger: GCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTGTGCTCGCATTTCCTaGCTTTCCCTGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDICARIS*LSLSWD
Trigger: GTCCCATGACAGGGAAAGCAAGGAAATGCGAGCACA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATGTGCTCGCATTTCCTaGCTTTCCCTGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILCARIS*LSLSWD
Trigger: GTCCCATGACAGGGAAAGCAAGGAAATGCGAGCACA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATAGTTTCATACTACTGTaGCTGGTCTGCGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDSFILL*LVCGPS
Trigger: AGATGGACCGCAGACCAGCAACAGTAGTATGAAACT...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTGGCTTTGGTGGCATGGCTCAATTCCCAGCGGAATACTTTTTCATGCACTGTCAAAAAGGCAAAACATTaGCTAGAATGTGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LALVAWLNSQRNTFSCTVKKAKH*LECVLG
Trigger: TCCCAAGACACATTCTAGCAAATGTTTTGCCTTTTT...GACAGTGCATGAAAAAGTATTCCGCTGGGAATTGAGCCATGCCACCAAAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGTCCTTCGCCTTGCGTTaGGGACACTGCATGACAGGA +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWSFALR*GHCMTG
Trigger: TCCTGTCATGCAGTGTCCCAAACGCAAGGCGAAGGA...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTGCATCTCCTTCGCCTaGCGTTTGGGACACTGCATG +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNCISFA*RLGHCM
Trigger: CATGCAGTGTCCCAAACGCAAGGCGAAGGAGATGCA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTCATCTGAAGCCTTCTaGACGCTATTTGCAACAGCT +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLISSEAF*TLFATA
Trigger: AGCTGTTGCAAATAGCGTCAAGAAGGCTTCAGATGA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000414679.6
CDS TCA 90 bp TGGGCTCAATTTCATCATTCTTTCCACTGGGAAGACCTAACTCCTTaGGTGCTTGAAAGATCACCTTTTCTGTTTTTCCCGATGCAAATG +
Preference number: 5 (lower is better)
Translates to: WAQFHHSFHWEDLTP*VLERSPFLFFPMQM
Trigger: CATTTGCATCGGGAAAAACAGAAAAGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTCCCAGTGGAAAGAATGATGAAATTGAGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 90 bp TCGACTTCTCTTTGTCATACTGTGCCACAATTTTGTCAACTTGCGTaGAGTGTAACTTCTGCATGGTACTGTGTTCCTTTGCATGTTTCT +
Preference number: 5 (lower is better)
Translates to: STSLCHTVPQFCQLA*SVTSAWYCVPLHVS
Trigger: AGAAACATGCAAAGGAACACAGTACCATGCAGAAGTTACACTGCACGCAAGTTGACAAAATTGTGGCACAGTATGACAAAGAGAAGTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 90 bp CAAATATGGATGGATATTAGTGGTAGCACCTACATATTTATAAGATaGCATCCACGCCTGCTCATCTTCTACAGTGACCAGGCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: QIWMDISGSTYIFIR*HPRLLIFYSDQALF
Trigger: AAAAAGGGCCTGGTCACTGTAGAAGATGAGCAGGCGTGGATGGCATCTTATAAATATGTAGGTGCTACCACTAATATCCATCCATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378473.9
ENST00000414679.6
ENST00000482123.1
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAAAAACTGCTCCTTCTaGCAAAAAGGAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGKNCSF*QKGGNF
Trigger: GAAGTTCCCTCCTTTTTGCAAGAAGGAGCAGTTTTT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGCCAAACTCATCCACTTaGAAGAGGCAGTTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRPNSST*KRQLGS
Trigger: TGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGG...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACAGCACCTGTCCTTCCTaGCCTTCACTTCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNSTCPS*PSLLHV
Trigger: GACATGGAGAAGTGAAGGCAAGGAAGGACAGGTGCT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGAGATTTTGGGATCCTTaGGTATGGCTCCCGACCGAA +
Preference number: 5 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVRFWDP*VWLPTE
Trigger: TTCGGTCGGGAGCCATACCAAAGGATCCCAAAATCT...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTAGATTTTGGGATCCTTaGGTATGGCTCCCGACCGAA +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIRFWDP*VWLPTE
Trigger: TTCGGTCGGGAGCCATACCAAAGGATCCCAAAATCT...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTGTCATTGGACTGACGTaGTTGGCCCTGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIVIGLT*LALKLC
Trigger: ACACAACTTCAGGGCCAACAACGTCAGTCCAATGAC...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCCGAGGACAAATCTTTaGTGTCAGTTCATAGAACTT +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALPRTNL*CQFIEL
Trigger: AAGTTCTATGAACTGACACAAAAGATTTGTCCTCGG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTTTCTTTTGAGGTCATaGGGGGATGGCAAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMFLLRS*GDGKAL
Trigger: CAGGGCTTTGCCATCCCCCAATGACCTCAAAAGAAA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATGAGTATTTTTCTTTaGAGGTCATTGGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGMSIFL*RSLGDG
Trigger: GCCATCCCCCAATGACCTCAAAAGAAAAATACTCAT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCGTAAATGCGACTCATTaGCCGTTTGTTATAATTGAC +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSVNATH*PFVIID
Trigger: GTCAATTATAACAAACGGCAAATGAGTCGCATTTAC...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTGGCCAATCAGCTTGTaGTTATCATCATACACAGCT +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGWPISL*LSSYTA
Trigger: AGCTGTGTATGATGATAACAACAAGCTGATTGGCCA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTGGCCAATCAGCTTGTaGTTATCATCATACACAGCT +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCWPISL*LSSYTA
Trigger: AGCTGTGTATGATGATAACAACAAGCTGATTGGCCA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCTCTGGCCAATCAGCTaGTTGTTATCATCATACACA +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLWPIS*LLSSYT
Trigger: TGTGTATGATGATAACAACAAGCTGATTGGCCAGAG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCTTGGCCTTTCCTTTCTaGTCATTTTTGGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALLAFPF*SFLEVS
Trigger: TGACACTTCCAAAAATGACAAGAAAGGAAAGGCCAA...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGAGTTCAATACCTTTCTaGGCTTCCACACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMSSIPF*ASTPEA
Trigger: GGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAACT...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTACTGTGCCACAATTTaGTCAACTTGCGTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGYCATI*STCVQC
Trigger: ACACTGCACGCAAGTTGACAAAATTGTGGCACAGTA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTTTCTGACCATTCCTTaGTGTGCTGTGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIFLTIP*CAVLQS
Trigger: AGATTGTAGCACAGCACACAAAGGAATGGTCAGAAA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTGCTGCTCGTGGGCATaGATGAGTAGCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRICCSWA*MSSFFS
Trigger: GCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATGCTGCTCGTGGGCATaGATGAGTAGCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SILMVSSFSPLCSEEHTECCSWA*MSSFFS
Trigger: GCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCA...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATGCTGCTCGTGGGCATaGATGAGTAGCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILCCSWA*MSSFFS
Trigger: GCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTTTCAGCTGCTGGGTTaGCTGCTCGTGGGCATTGAT +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNFQLLG*LLVGID
Trigger: ATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGTTTCAGCTGCTGGGTTaGCTGCTCGTGGGCATTGAT +
Preference number: 5 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVFQLLG*LLVGID
Trigger: ATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAA...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGTGTGCTCGCATTTCCTaGCTTTCCCTGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVCARIS*LSLSWD
Trigger: GTCCCATGACAGGGAAAGCAAGGAAATGCGAGCACA...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTGCAGTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 5 (lower is better)
Translates to: LQFKHVLRHHKGELFTPSCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...GCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAACTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTCATCACAAAGGAGAGTaGTTCACACCAAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGHHKGE*FTPSSF
Trigger: AAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCCATGTTTTGCATCATTaGGGTGAAAAACATGCTGAG +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALHVLHH*GEKHAE
Trigger: CTCAGCATGTTTTTCACCCAAATGATGCAAAACATG...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCCCAGCGGAATACTTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAGCCACTCAGAATCTTaGAAAATTGGCAATCCAAAT +
Preference number: 5 (lower is better)
Translates to: FPAEYFFMHCLQLNYSRLSHSES*KIGNPN
Trigger: ATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCT...AAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAAGTATTCCGCTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTACCAGGCCCTTTTTGTaGTTTTCATGTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLITRPFL*FSCSRS
Trigger: TGACCTTGAACATGAAAACAACAAAAAGGGCCTGGT...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000414679.6
CDS GCA 90 bp TGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTTGGAGTTTCATACTACTGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: CVQKFVSESFDALWV*CFSLHFGVSYYCCW
Trigger: CCAGCAACAGTAGTATGAAACTCCAAAATGCAAACTGAAGCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 90 bp CTGACTCGCCTTTCCCGTTCTGCTTTATTCTTGATAGATTTATCTTaGCTGATGGCTTTGCTATTTTCCATAGAAATCTTAGCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LTRLSRSALFLIDLS*LMALLFSIEILAWC
Trigger: ACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGATAAATCTATCAAGAATAAAGCAGAACGGGAAAGGCGAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATACTTTGAAGAGGCAGTaGGGTTCAAACACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: CNSTTAGLKTMQINTVANTLKRQ*GSNTKD
Trigger: ATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGT...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTACCAAACTCATCCACTTaGAAGAGGCAGTTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLPNSST*KRQLGS
Trigger: TGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGG...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATAGATTTTGGGATCCTTaGGTATGGCTCCCGACCGAA +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHRFWDP*VWLPTE
Trigger: TTCGGTCGGGAGCCATACCAAAGGATCCCAAAATCT...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATAGATTTTGGGATCCTTaGGTATGGCTCCCGACCGAA +
Preference number: 5 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHRFWDP*VWLPTE
Trigger: TTCGGTCGGGAGCCATACCAAAGGATCCCAAAATCT...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCAGAGCAGCCAAGATTTaGGGATCCTTTGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIRAAKI*GSFGMA
Trigger: AGCCATACCAAAGGATCCCAAAATCTTGGCTGCTCT...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAATTGGACTGACGTTGTaGGCCCTGAAGTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLIGLTL*ALKLCM
Trigger: CATACACAACTTCAGGGCCAACAACGTCAGTCCAAT...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATGTCATTGGACTGACGTaGTTGGCCCTGAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHVIGLT*LALKLC
Trigger: ACACAACTTCAGGGCCAACAACGTCAGTCCAATGAC...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGTTCATCCAGTGTTTCTaGAGGCATGTCATTGGACTG +
Preference number: 5 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRFIQCF*RHVIGL
Trigger: CAGTCCAATGACATGCCTCAAGAAACACTGGATGAA...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTCCGAGGACAAATCTTTaGTGTCAGTTCATAGAACTT +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIPRTNL*CQFIEL
Trigger: AAGTTCTATGAACTGACACAAAAGATTTGTCCTCGG...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGTTTCTTTTGAGGTCATaGGGGGATGGCAAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVFLLRS*GDGKAL
Trigger: CAGGGCTTTGCCATCCCCCAATGACCTCAAAAGAAA...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTGCCACATGGAAACCTaGAAACTTTACAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHCHMET*KLYRLG
Trigger: GCCCAGCCTGTAAAGTTTCAAGGTTTCCATGTGGCA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGCCCTAAAATCAGTAATCTGATTAGTTCTAGACTACCGGGTTTCCATGCGCTCGTAAATGCGACTCATTaGCCGTTTGTTATAATTGAC +
Preference number: 5 (lower is better)
Translates to: CPKISNLISSRLPGFHALVNATH*PFVIID
Trigger: GTCAATTATAACAAACGGCAAATGAGTCGCATTTAC...GAGCGCATGGAAACCCGGTAGTCTAGAACTAATCAGATTACTGATTTTAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTAGCCCATAGCTCTCATTaGGTCTGCTCTCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILAHSSH*VCSLFC
Trigger: ACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGGC...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATAGCCCATAGCTCTCATTaGGTCTGCTCTCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIAHSSH*VCSLFC
Trigger: ACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGGC...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCGCCCATAGCTCTCATTaGGTCTGCTCTCTTTTCTGT +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIAHSSH*VCSLFC
Trigger: ACAGAAAAGAGAGCAGACCAAATGAGAGCTATGGGC...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGCCTTTCTTGTCATTTTaGGAAGTGTCACTGGGCACG +
Preference number: 5 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMPFLSF*EVSLGT
Trigger: CGTGCCCAGTGACACTTCCAAAAATGACAAGAAAGG...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTACCTTTCTTGTCATTTTaGGAAGTGTCACTGGGCACG +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILPFLSF*EVSLGT
Trigger: CGTGCCCAGTGACACTTCCAAAAATGACAAGAAAGG...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTTGGCCTTTCCTTTCTaGTCATTTTTGGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGLAFPF*SFLEVS
Trigger: TGACACTTCCAAAAATGACAAGAAAGGAAAGGCCAA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTTTGCTTTGGCGGTGTaGGCCTTTCCTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIFALAV*AFPFLS
Trigger: TGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAAA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGAGTTCAATACCTTTCTaGGCTTCCACACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWSSIPF*ASTPEA
Trigger: GGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAACT...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATGTCTTCTATCCTTACTaGAGGGATAAGTTCAATACC +
Preference number: 5 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADVFYPY*RDKFNT
Trigger: GGTATTGAACTTATCCCTCAAGTAAGGATAGAAGAC...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGTCTTCTATCCTTACTaGAGGGATAAGTTCAATACC +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCVFYPY*RDKFNT
Trigger: GGTATTGAACTTATCCCTCAAGTAAGGATAGAAGAC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTCAGCACTGTGGGTATaGATCATTTCTGACCATTCC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALSALWV*IISDHS
Trigger: GGAATGGTCAGAAATGATCAATACCCACAGTGCTGA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTCTTGGCTGATGGCTTaGCTATTTTCCATAGAAATC +
Preference number: 5 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADSWLMA*LFSIEI
Trigger: GATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCAGAAACTTTTTAGTGTaGCTGCTGTTTAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCRNFLV*LLFNSL
Trigger: CAGGGAGTTAAACAGCAGCAACACTAAAAAGTTTCT...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTAGTTTCATACTACTGTaGCTGGTCTGCGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISFILL*LVCGPS
Trigger: AGATGGACCGCAGACCAGCAACAGTAGTATGAAACT...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCGTTTGCTGCTTCAGTTaGCATTTTGGAGTTTCATAC +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCVCCFS*HFGVSY
Trigger: GTATGAAACTCCAAAATGCAAACTGAAGCAGCAAAC...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTTTCATCCATGGAGTTaGTGTTCAGAAGTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIFHPWS*CSEVCE
Trigger: CTCACAAACTTCTGAACACAAACTCCATGGATGAAA...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTTTCATGCACTGTCTGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 5 (lower is better)
Translates to: FFMHCLQLNYSRLKDHADLYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...ATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCAGACAGTGCATGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAAAAACTGCTCCTTCTaGCAAAAAGGAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALKNCSF*QKGGNF
Trigger: GAAGTTCCCTCCTTTTTGCAAGAAGGAGCAGTTTTT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGACTTTGAAGAGGCAGTaGGGTTCAAACACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRTLKRQ*GSNTKD
Trigger: ATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGT...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACCCAAACTCATCCACTTaGAAGAGGCAGTTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNPNSST*KRQLGS
Trigger: TGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGG...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCAGGCCTTCTACCCATaGCTTAGTTACTTCTGGATT +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIQAFYP*LSYFWI
Trigger: AATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCTG...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTTGTTGGCCCTGAAGTaGTGTATGATTGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDILLALK*CMIDLR
Trigger: CCTGAGATCAATCATACACAACTTCAGGGCCAACAA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTTGTTGGCCCTGAAGTaGTGTATGATTGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCELLALK*CMIDLR
Trigger: CCTGAGATCAATCATACACAACTTCAGGGCCAACAA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATTGTTGGCCCTGAAGTaGTGTATGATTGATCTCAGG +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILLLALK*CMIDLR
Trigger: CCTGAGATCAATCATACACAACTTCAGGGCCAACAA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATTGGACTGACGTTGTaGGCCCTGAAGTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNIGLTL*ALKLCM
Trigger: CATACACAACTTCAGGGCCAACAACGTCAGTCCAAT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATATTGGACTGACGTTGTaGGCCCTGAAGTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHIGLTL*ALKLCM
Trigger: CATACACAACTTCAGGGCCAACAACGTCAGTCCAAT...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTGCTGCTTCCATGAGTTATTATaGGTTCTTGGTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: VCVQKFVSESFDALWVCCFHELL*VLGLHL
Trigger: AAGGTGAAGACCAAGAACCAATAATAACTCATGGAA...GCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTTCCATGAGTTATTATaGGTTCTTGGTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGFHELL*VLGLHL
Trigger: AAGGTGAAGACCAAGAACCAATAATAACTCATGGAA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGATGAGTATTTTTCTTTaGAGGTCATTGGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALMSIFL*RSLGDG
Trigger: GCCATCCCCCAATGACCTCAAAAGAAAAATACTCAT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTTCAAACATGTCCTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTGTAAATGCGACTCATTaGCCGTTTGTTATAATTGAC +
Preference number: 5 (lower is better)
Translates to: VQTCPKASQRRVVHTKLIVNATH*PFVIID
Trigger: GTCAATTATAACAAACGGCAAATGAGTCGCATTTAC...AATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAGGACATGTTTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTGTAAATGCGACTCATTaGCCGTTTGTTATAATTGAC +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGVNATH*PFVIID
Trigger: GTCAATTATAACAAACGGCAAATGAGTCGCATTTAC...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATCTCATGAAATCTGGTTaGAGAAGGTACCCGCACGAT +
Preference number: 5 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHLMKSG*RRYPHD
Trigger: ATCGTGCGGGTACCTTCTCAAACCAGATTTCATGAG...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCCTTTCTTGTCATTTTaGGAAGTGTCACTGGGCACG +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHPFLSF*EVSLGT
Trigger: CGTGCCCAGTGACACTTCCAAAAATGACAAGAAAGG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTTTGCTTTGGCGGTGTaGGCCTTTCCTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHFALAV*AFPFLS
Trigger: TGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAAA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTACTGTGCCACAATTTaGTCAACTTGCGTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDIYCATI*STCVQC
Trigger: ACACTGCACGCAAGTTGACAAAATTGTGGCACAGTA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGTACTGTGCCACAATTTaGTCAACTTGCGTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVYCATI*STCVQC
Trigger: ACACTGCACGCAAGTTGACAAAATTGTGGCACAGTA...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCTCAGCACTGTGGGTATaGATCATTTCTGACCATTCC +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRISALWV*IISDHS
Trigger: GGAATGGTCAGAAATGATCAATACCCACAGTGCTGA...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTCAGCACTGTGGGTATaGATCATTTCTGACCATTCC +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISALWV*IISDHS
Trigger: GGAATGGTCAGAAATGATCAATACCCACAGTGCTGA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATTCTTGGCTGATGGCTTaGCTATTTTCCATAGAAATC +
Preference number: 5 (lower is better)
Translates to: CNSTTAGLKTMQINTVANSWLMA*LFSIEI
Trigger: GATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGA...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGCAACTCAACTACAGCAGGCTTAAAGACCATGCAGATTAACACTGTAGCAAATAGAAACTTTTTAGTGTaGCTGCTGTTTAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: CNSTTAGLKTMQINTVANRNFLV*LLFNSL
Trigger: CAGGGAGTTAAACAGCAGCAACACTAAAAAGTTTCT...ATTTGCTACAGTGTTAATCTGCATGGTCTTTAAGCCTGCTGTAGTTGAGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACAGTTTCATACTACTGTaGCTGGTCTGCGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNSFILL*LVCGPS
Trigger: AGATGGACCGCAGACCAGCAACAGTAGTATGAAACT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTGTTTGCTGCTTCAGTTaGCATTTTGGAGTTTCATAC +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGVCCFS*HFGVSY
Trigger: GTATGAAACTCCAAAATGCAAACTGAAGCAGCAAAC...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATTTGCTAGAATGTGTCTTGGGAGCAAATACTCTTGACGAGTGTTATGCGTGTTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 5 (lower is better)
Translates to: HLLECVLGANTLDECYACCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...ACACGCATAACACTCGTCAAGAGTATTTGCTCCCAAGACACATTCTAGCAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATTTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 5 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDLYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGCATCACAAAGGAGAGTaGTTCACACCAAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRHHKGE*FTPSSF
Trigger: AAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGGGAGCAAATACTCTaGACGAGTGTTATGCGTGTT +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEWEQIL*TSVMRV
Trigger: AACACGCATAACACTCGTCAAGAGTATTTGCTCCCA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CTAAGGCATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTAAAAAGGCAAAACATTaGCTAGAATGTGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LRHHKGELFTPSSFTCDGKKAKH*LECVLG
Trigger: TCCCAAGACACATTCTAGCAAATGTTTTGCCTTTTT...ACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATGCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS TCA 90 bp ATTTCATCATTCTTTCCACTGGGAAGACCTAACTCCTTGAGTGCTTaGAAGATCACCTTTTCTGTTTTTCCCGATGCAAATGTTCTAGTA +
Preference number: 5 (lower is better)
Translates to: ISSFFPLGRPNSLSA*KITFSVFPDANVLV
Trigger: TACTAGAACATTTGCATCGGGAAAAACAGAAAAGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTCCCAGTGGAAAGAATGATGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 90 bp GTGCTTGTTTCAACAGGAGATCCCCAAATAGATCTTCGCAATATTTaGACATCTTGTACTGTTGATATTTGCTGCAGTGATTTTCAAAGG +
Preference number: 5 (lower is better)
Translates to: VLVSTGDPQIDLRNI*TSCTVDICCSDFQR
Trigger: CCTTTGAAAATCACTGCAGCAAATATCAACAGTACAAGATGTCCAAATATTGCGAAGATCTATTTGGGGATCTCCTGTTGAAACAAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCACTTTGAAGAGGCAGTaGGGTTCAAACACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRITLKRQ*GSNTKD
Trigger: ATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGT...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGCAGGCCTTCTACCCATaGCTTAGTTACTTCTGGATT +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWQAFYP*LSYFWI
Trigger: AATCCAGAAGTAACTAAGCAATGGGTAGAAGGCCTG...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGGTTAACTGTGTATGGATTAGTCTTTATTGGTGCTTGTGTATCATGCAAACATTTCATCCAGTGTTTCTaGAGGCATGTCATTGGACTG +
Preference number: 5 (lower is better)
Translates to: RLTVYGLVFIGACVSCKHFIQCF*RHVIGL
Trigger: CAGTCCAATGACATGCCTCAAGAAACACTGGATGAA...ATGTTTGCATGATACACAAGCACCAATAAAGACTAATCCATACACAGTTAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTTCATCCAGTGTTTCTaGAGGCATGTCATTGGACTG +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNFIQCF*RHVIGL
Trigger: CAGTCCAATGACATGCCTCAAGAAACACTGGATGAA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTAGTTATTATTGGTTCTaGGTCTTCACCTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGSYYWF*VFTFSI
Trigger: GATGGAAAAGGTGAAGACCAAGAACCAATAATAACT...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATAGTTATTATTGGTTCTaGGTCTTCACCTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDSYYWF*VFTFSI
Trigger: GATGGAAAAGGTGAAGACCAAGAACCAATAATAACT...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTTTCCATGAGTTATTATaGGTTCTTGGTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGFHELL*VLGLHL
Trigger: AAGGTGAAGACCAAGAACCAATAATAACTCATGGAA...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATATGGCCAATCAGCTTGTaGTTATCATCATACACAGCT +
Preference number: 5 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIWPISL*LSSYTA
Trigger: AGCTGTGTATGATGATAACAACAAGCTGATTGGCCA...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGGCCAATCAGCTTGTaGTTATCATCATACACAGCT +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEWPISL*LSSYTA
Trigger: AGCTGTGTATGATGATAACAACAAGCTGATTGGCCA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGCTCTGGCCAATCAGCTaGTTGTTATCATCATACACA +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCELWPIS*LLSSYT
Trigger: TGTGTATGATGATAACAACAAGCTGATTGGCCAGAG...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGCTCTGGCCAATCAGCTaGTTGTTATCATCATACACA +
Preference number: 5 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVLWPIS*LLSSYT
Trigger: TGTGTATGATGATAACAACAAGCTGATTGGCCAGAG...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTACTGTGCCACAATTTaGTCAACTTGCGTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNYCATI*STCVQC
Trigger: ACACTGCACGCAAGTTGACAAAATTGTGGCACAGTA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TGTAGACAGAGTTTTCTTTTCCTAGTGCATGCACTTGCTATGAAATTGCTAATGTTTCTGACCATTCCTTaGTGTGCTGTGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: CRQSFLFLVHALAMKLLMFLTIP*CAVLQS
Trigger: AGATTGTAGCACAGCACACAAAGGAATGGTCAGAAA...CATTAGCAATTTCATAGCAAGTGCATGCACTAGGAAAAGAAAACTCTGTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATTTCTGACCATTCCTTaGTGTGCTGTGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILFLTIP*CAVLQS
Trigger: AGATTGTAGCACAGCACACAAAGGAATGGTCAGAAA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGTCTTGGCTGATGGCTTaGCTATTTTCCATAGAAATC +
Preference number: 5 (lower is better)
Translates to: KSTRICMFCIIWVKNMLRSWLMA*LFSIEI
Trigger: GATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGA...CCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAGAAACTTTTTAGTGTaGCTGCTGTTTAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALRNFLV*LLFNSL
Trigger: CAGGGAGTTAAACAGCAGCAACACTAAAAAGTTTCT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GTGATGAATTCAGTCAAGTGTTACAGAATGGTGAGCATAGTTGAGCTCTTGGATGCTTCAGTTTGCATTTaGGAGTTTCATACTACTGTT +
Preference number: 5 (lower is better)
Translates to: VMNSVKCYRMVSIVELLDASVCI*EFHTTV
Trigger: AACAGTAGTATGAAACTCCAAAATGCAAACTGAAGC...ATCCAAGAGCTCAACTATGCTCACCATTCTGTAACACTTGACTGAATTCATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGTTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALLYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAACATCACAAAGGAGAGTaGTTCACACCAAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: SILMVSSFSPLCSEEHTEHHKGE*FTPSSF
Trigger: AAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTCCAAGTCTCTCTGGTAGCCACTCAGAATCTTaGAAAATTGGCAATCCAAAT +
Preference number: 5 (lower is better)
Translates to: AILKLLNRSQSDIPSLSGSHSES*KIGNPN
Trigger: ATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCT...ACCAGAGAGACTTGGAATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGACCAGGCCCTTTTTGTaGTTTTCATGTTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCETRPFL*FSCSRS
Trigger: TGACCTTGAACATGAAAACAACAAAAAGGGCCTGGT...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000414679.6
CDS-3UTR CAA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGAAAAACTGCTCCTTCTaGCAAAAAGGAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVKNCSF*QKGGNF
Trigger: GAAGTTCCCTCCTTTTTGCAAGAAGGAGCAGTTTTT...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGAAAAACTGCTCCTTCTaGCAAAAAGGAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWKNCSF*QKGGNF
Trigger: GAAGTTCCCTCCTTTTTGCAAGAAGGAGCAGTTTTT...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACACTTTGAAGAGGCAGTaGGGTTCAAACACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNTLKRQ*GSNTKD
Trigger: ATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGACTTTGAAGAGGCAGTaGGGTTCAAACACAAAGGAT +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWTLKRQ*GSNTKD
Trigger: ATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGT...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATACCGAGGACAAATCTTTaGTGTCAGTTCATAGAACTT +
Preference number: 5 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIPRTNL*CQFIEL
Trigger: AAGTTCTATGAACTGACACAAAAGATTTGTCCTCGG...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGAGTTATTATTGGTTCTaGGTCTTCACCTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALSYYWF*VFTFSI
Trigger: GATGGAAAAGGTGAAGACCAAGAACCAATAATAACT...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGAGTATTTTTCTTTaGAGGTCATTGGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNMSIFL*RSLGDG
Trigger: GCCATCCCCCAATGACCTCAAAAGAAAAATACTCAT...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGTGGCCAATCAGCTTGTaGTTATCATCATACACAGCT +
Preference number: 5 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVWPISL*LSSYTA
Trigger: AGCTGTGTATGATGATAACAACAAGCTGATTGGCCA...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGTTGGCCTTTCCTTTCTaGTCATTTTTGGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVLAFPF*SFLEVS
Trigger: TGACACTTCCAAAAATGACAAGAAAGGAAAGGCCAA...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACTTTCTGACCATTCCTTaGTGTGCTGTGCTACAATCT +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNFLTIP*CAVLQS
Trigger: AGATTGTAGCACAGCACACAAAGGAATGGTCAGAAA...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp TTTGGCCAAGGAAATGCAATACTCAAGCTGTTAAATAGAAGTCAGTCAGACATTTCTTGGCTGATGGCTTaGCTATTTTCCATAGAAATC +
Preference number: 5 (lower is better)
Translates to: FGQGNAILKLLNRSQSDISWLMA*LFSIEI
Trigger: GATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGA...AATGTCTGACTGACTTCTATTTAACAGCTTGAGTATTGCATTTCCTTGGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGAGTCTTTTGATGCTTTGGCTTCAGTTTGCATTTaGGAGTTTCATACTACTGTT +
Preference number: 5 (lower is better)
Translates to: FIHGVCVQKFVSESFDALASVCI*EFHTTV
Trigger: AACAGTAGTATGAAACTCCAAAATGCAAACTGAAGC...CAAAGCATCAAAAGACTCACTCACAAACTTCTGAACACAAACTCCATGGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCGTTTGCTGCTTCAGTTaGCATTTTGGAGTTTCATAC +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIVCCFS*HFGVSY
Trigger: GTATGAAACTCCAAAATGCAAACTGAAGCAGCAAAC...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTTTCATCCATGGAGTTaGTGTTCAGAAGTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEFHPWS*CSEVCE
Trigger: CTCACAAACTTCTGAACACAAACTCCATGGATGAAA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TCAATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATTGTATTATCAATGGTaGGACTCTGCCTTACTGGAA +
Preference number: 5 (lower is better)
Translates to: SILMVSSFSPLCSEEHTELYYQW*DSALLE
Trigger: TTCCAGTAAGGCAGAGTCCAACCATTGATAATACAA...TTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGCATCACAAAGGAGAGTaGTTCACACCAAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWHHKGE*FTPSSF
Trigger: AAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AATATTGATGGTATCATCATTTTCTCCGCTTTGTTCAGAGGAACACACAGAATCCATGTTTTGCATCATTaGGGTGAAAAACATGCTGAG +
Preference number: 5 (lower is better)
Translates to: NIDGIIIFSALFRGTHRIHVLHH*GEKHAE
Trigger: CTCAGCATGTTTTTCACCCAAATGATGCAAAACATG...GATTCTGTGTGTTCCTCTGAACAAAGCGGAGAAAATGATGATACCATCAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ATGATGAGAAGCCACTCAGAATCTTTGAAAATTGGCAATCCAAATGTGGTGATACATGTTTTGCATCATTaGGGTGAAAAACATGCTGAG +
Preference number: 5 (lower is better)
Translates to: MMRSHSESLKIGNPNVVIHVLHH*GEKHAE
Trigger: CTCAGCATGTTTTTCACCCAAATGATGCAAAACATG...TATCACCACATTTGGATTGCCAATTTTCAAAGATTCTGAGTGGCTTCTCATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGCCGAGGACAAATCTTTaGTGTCAGTTCATAGAACTT +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWPRTNL*CQFIEL
Trigger: AAGTTCTATGAACTGACACAAAAGATTTGTCCTCGG...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATTCCATGAGTTATTATaGGTTCTTGGTCTTCACCTT +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILFHELL*VLGLHL
Trigger: AAGGTGAAGACCAAGAACCAATAATAACTCATGGAA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATTTGGCCTTTCCTTTCTaGTCATTTTTGGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHLAFPF*SFLEVS
Trigger: TGACACTTCCAAAAATGACAAGAAAGGAAAGGCCAA...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGGTCTTCTATCCTTACTaGAGGGATAAGTTCAATACC +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWVFYPY*RDKFNT
Trigger: GGTATTGAACTTATCCCTCAAGTAAGGATAGAAGAC...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CAGAGGAACACACAGAATCAATTTTTACAAGCATATACAACAATTCATCTGGTGGTCTTCTATCCTTACTaGAGGGATAAGTTCAATACC +
Preference number: 5 (lower is better)
Translates to: QRNTQNQFLQAYTTIHLVVFYPY*RDKFNT
Trigger: GGTATTGAACTTATCCCTCAAGTAAGGATAGAAGAC...CACCAGATGAATTGTTGTATATGCTTGTAAAAATTGATTCTGTGTGTTCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATAGAAACTTTTTAGTGTaGCTGCTGTTTAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHRNFLV*LLFNSL
Trigger: CAGGGAGTTAAACAGCAGCAACACTAAAAAGTTTCT...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGAGAAACTTTTTAGTGTaGCTGCTGTTTAACTCCCTG +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWRNFLV*LLFNSL
Trigger: CAGGGAGTTAAACAGCAGCAACACTAAAAAGTTTCT...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ACATGGTCACATTTACAAACGTTTGCCAATAACCACTTCACAATCTTTATGGTGGCTTCAGTTTGCATTTaGGAGTTTCATACTACTGTT +
Preference number: 5 (lower is better)
Translates to: TWSHLQTFANNHFTIFMVASVCI*EFHTTV
Trigger: AACAGTAGTATGAAACTCCAAAATGCAAACTGAAGC...CACCATAAAGATTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTGACCATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGGCTTCAGTTTGCATTTaGGAGTTTCATACTACTGTT +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCEASVCI*EFHTTV
Trigger: AACAGTAGTATGAAACTCCAAAATGCAAACTGAAGC...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp GGAAACAAAATAAACAGCTTTCATCCATGGAGTTTGTGTTCAGAAGTTTGTGAGTGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 5 (lower is better)
Translates to: GNKINSFHPWSLCSEVCECSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...CTCACAAACTTCTGAACACAAACTCCATGGATGAAAGCTGTTTATTTTGTTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp CATCACAAAGGAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATGTAGCTATTTTTGTTaGGCCAAGGAAATGCAATAC +
Preference number: 5 (lower is better)
Translates to: HHKGELFTPSSFTCDGILCSYFC*AKEMQY
Trigger: GTATTGCATTTCCTTGGCCAAACAAAAATAGCTACA...TAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTCCTTTGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTACACATTTACAAACGTTaGCCAATAACCACTTCACAA +
Preference number: 5 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLHIYKR*PITTSQ
Trigger: TTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTG...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp ACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACATGCTGAGGGTATTAAAAAAGGCAAAACATTaGCTAGAATGTGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: TRICMFCIIWVKNMLRVLKKAKH*LECVLG
Trigger: TCCCAAGACACATTCTAGCAAATGTTTTGCCTTTTT...TAATACCCTCAGCATGTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCATGTTTTGCATCATTaGGGTGAAAAACATGCTGAG +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHHVLHH*GEKHAE
Trigger: CTCAGCATGTTTTTCACCCAAATGATGCAAAACATG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATAGTTATTATTGGTTCTaGGTCTTCACCTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHSYYWF*VFTFSI
Trigger: GATGGAAAAGGTGAAGACCAAGAACCAATAATAACT...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp AGTTGTATTATCAATGGTTGGACTCTGCCTTACTGGAATAGTAAATTTTTGTGGAGTTATTATTGGTTCTaGGTCTTCACCTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: SCIINGWTLPYWNSKFLWSYYWF*VFTFSI
Trigger: GATGGAAAAGGTGAAGACCAAGAACCAATAATAACT...CCACAAAAATTTACTATTCCAGTAAGGCAGAGTCCAACCATTGATAATACAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
CDS-3UTR CAA 90 bp TTACAACTGAAGTCAACTAGAATCTGCATGTTTTGCATCATTTGGGTGAAAAACCACATTTACAAACGTTaGCCAATAACCACTTCACAA +
Preference number: 5 (lower is better)
Translates to: LQLKSTRICMFCIIWVKNHIYKR*PITTSQ
Trigger: TTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTG...GTTTTTCACCCAAATGATGCAAAACATGCAGATTCTAGTTGACTTCAGTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS-3UTR CAA 90 bp GAGAGTTGTTCACACCAAGCTCATTTACTTGTGATGGTATTTTATAGCAAACATCACATTTACAAACGTTaGCCAATAACCACTTCACAA +
Preference number: 5 (lower is better)
Translates to: ESCSHQAHLLVMVFYSKHHIYKR*PITTSQ
Trigger: TTGTGAAGTGGTTATTGGCAAACGTTTGTAAATGTG...ATGTTTGCTATAAAATACCATCACAAGTAAATGAGCTTGGTGTGAACAACTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
CDS CCA 72 bp GGAGCTGCTGCCGGGGATGCGGCGACGGCCGCTGCCTaGAGACCCAGTGTGTACGCGCGTGTGTGTGCGCGC +
Preference number: 6 (lower is better)
Translates to: GAAAGDAATAAA*RPSVYARVCAR
Trigger: GCGCGCACACACACGCGCGTACACACTGGGTCTCCAGGCAGCGGCCGTCGCCGCATCCCCGGCAGCAGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000437503.5
CDS GCA 72 bp TTTTCCTGTCACTTTGCCTGGAGCTGCTGCCGGGGATaGGGCGACGGCCGCTGCCTGGAGACCCAGTGTGTA +
Preference number: 6 (lower is better)
Translates to: FSCHFAWSCCRG*GDGRCLETQCV
Trigger: TACACACTGGGTCTCCAGGCAGCGGCCGTCGCCGCATCCCCGGCAGCAGCTCCAGGCAAAGTGACAGGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000437503.5
CDS GCA 72 bp GAAATTGTCTTTTCCTGTCACTTTGCCTGGAGCTGCTaGCGGGGATGCGGCGACGGCCGCTGCCTGGAGACC +
Preference number: 6 (lower is better)
Translates to: EIVFSCHFAWSC*RGCGDGRCLET
Trigger: GGTCTCCAGGCAGCGGCCGTCGCCGCATCCCCGGCAGCAGCTCCAGGCAAAGTGACAGGAAAAGACAATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378473.9
ENST00000437503.5
CDS TCA 72 bp TCCTTTCACGCAGAGTCCCACCCCTCCGCTACAAAGTaGGAGGCTGGGCAAACAGTGCCCACAGCCACAACA +
Preference number: 6 (lower is better)
Translates to: SFHAESHPSATK*EAGQTVPTATT
Trigger: TGTTGTGGCTGTGGGCACTGTTTGCCCAGCCTCTCACTTTGTAGCGGAGGGGTGGGACTCTGCGTGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416836.5
CDS GCA 72 bp GGTCTGCGGTCCATCTCGGCTTCCAATTTCACCATCTaGTGCATCTCCTTCGCCTTGCGTTTGGGACACTGC +
Preference number: 6 (lower is better)
Translates to: GLRSISASNFTI*CISFALRLGHC
Trigger: GCAGTGTCCCAAACGCAAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378473.9
ENST00000378501.2
ENST00000492632.5
CDS CCA 72 bp CGCAGAGTCCCACCCCTCCGCTACAAAGTGAGAGGCTaGGCAAACAGTGCCCACAGCCACAACAAAATATCC +
Preference number: 6 (lower is better)
Translates to: RRVPPLRYKVRG*ANSAHSHNKIS
Trigger: GGATATTTTGTTGTGGCTGTGGGCACTGTTTGCCCAGCCTCTCACTTTGTAGCGGAGGGGTGGGACTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416836.5
CDS GCA 72 bp CTGCGGTCCATCTCGGCTTCCAATTTCACCATCTGCTaGATCTCCTTCGCCTTGCGTTTGGGACACTGCATG +
Preference number: 6 (lower is better)
Translates to: LRSISASNFTIC*ISFALRLGHCM
Trigger: CATGCAGTGTCCCAAACGCAAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378473.9
ENST00000378501.2
ENST00000492632.5
CDS CCA 72 bp CCCTCATTTCGAAGGGAAATGTGTCGATATCCGGCTTaGAGGCCATCAAGCGGGAGGATCCTCTGGCCAATC +
Preference number: 6 (lower is better)
Translates to: PSFRREMCRYPA*RPSSGRILWPI
Trigger: GATTGGCCAGAGGATCCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACACATTTCCCTTCGAAATGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CAA 90 bp CTGTCATGGGACAGTTTCAGCTGCTGGGTTTGCTGCTCGTGGGCATaGATGAGTAGCTTTTTCAGCAGCTCACACTGCTGGCTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: LSWDSFSCWVCCSWA*MSSFFSSSHCWLRC
Trigger: GCACCTCAGCCAGCAGTGTGAGCTGCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCATGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS GCA 72 bp AGTAGCTTTTTCAGCAGCTCACACTGCTGGCTGAGGTaGAGGTCTCGGATTTCTTGCTCCTCAGCACTGTGG +
Preference number: 6 (lower is better)
Translates to: SSFFSSSHCWLR*RSRISCSSALW
Trigger: CCACAGTGCTGAGGAGCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAAAAAGCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CAA 72 bp TCCCTCATTTCGAAGGGAAATGTGTCGATATCCGGCTaGGAGGCCATCAAGCGGGAGGATCCTCTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: SLISKGNVSISG*EAIKREDPLAN
Trigger: ATTGGCCAGAGGATCCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACACATTTCCCTTCGAAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 72 bp CTGCGGTCCATCTCGGCTTCCAATTTCACCATCTGCTaGATCTCCTTCGCCTGCTCATTCTGTTTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: LRSISASNFTIC*ISFACSFCFSR
Trigger: CCTAGAGAAACAGAATGAGCAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378493.5
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS GCA 72 bp GGTCTGCGGTCCATCTCGGCTTCCAATTTCACCATCTaGTGCATCTCCTTCGCCTGCTCATTCTGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: GLRSISASNFTI*CISFACSFCFS
Trigger: AGAGAAACAGAATGAGCAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378493.5
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CAA 72 bp GACAGTTTCAGCTGCTGGGTTTGCTGCTCGTGGGCATaGATGAGTAGCTTTTTCAGCAGCTCACACTGCTGG +
Preference number: 6 (lower is better)
Translates to: DSFSCWVCCSWA*MSSFFSSSHCW
Trigger: CCAGCAGTGTGAGCTGCTGAAAAAGCTACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAACTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS GCA 72 bp TCACACTGCTGGCTGAGGTGCAGGTCTCGGATTTCTTaGTCCTCAGCACTGTGGGTATTGATCATTTCTGAC +
Preference number: 6 (lower is better)
Translates to: SHCWLRCRSRIS*SSALWVLIISD
Trigger: GTCAGAAATGATCAATACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS GCA 72 bp ATTTCCTTGCTTTCCCTGTCATGGGACAGTTTCAGCTaGTGGGTTTGCTGCTCGTGGGCATTGATGAGTAGC +
Preference number: 6 (lower is better)
Translates to: ISLLSLSWDSFS*WVCCSWALMSS
Trigger: GCTACTCATCAATGCCCACGAGCAGCAAACCCAGCAGCTGAAACTGTCCCATGACAGGGAAAGCAAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 72 bp CCATGCGAGTTCGGAATTCCTTACGTATGGTGTCAGTaGGCAACCCATACATATCCACCTCTACGTAGGTGC +
Preference number: 6 (lower is better)
Translates to: PCEFGIPYVWCQ*ATHTYPPLRRC
Trigger: GCACCTACGTAGAGGTGGATATGTATGGGTTGCCCACTGACACCATACGTAAGGAATTCCGAACTCGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 72 bp TATCCGGCTTGGAGGCCATCAAGCGGGAGGATCCTCTaGCCAATCAGCTTGTTGTTATCATCATACACAGCT +
Preference number: 6 (lower is better)
Translates to: YPAWRPSSGRIL*PISLLLSSYTA
Trigger: AGCTGTGTATGATGATAACAACAAGCTGATTGGCCAGAGGATCCTCCCGCTTGATGGCCTCCAAGCCGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 72 bp GCATTGATGAGTAGCTTTTTCAGCAGCTCACACTGCTaGCTGAGGTGCAGGTCTCGGATTTCTTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: ALMSSFFSSSHC*LRCRSRISCSS
Trigger: TGAGGAGCAAGAAATCCGAGACCTGCACCTCAGCCAGCAGTGTGAGCTGCTGAAAAAGCTACTCATCAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CAA 72 bp TTGGGATCCTTTGGTATGGCTCCCGACCGAATACTGTaGATGAGGGAGCATTCTAGCACCTGTCCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: LGSFGMAPDRIL*MREHSSTCPSL
Trigger: CAAGGAAGGACAGGTGCTAGAATGCTCCCTCATCAACAGTATTCGGTCGGGAGCCATACCAAAGGATCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS CAA 90 bp GCCAAGATTTTGGGATCCTTTGGTATGGCTCCCGACCGAATACTGTaGATGAGGGAGCATTCTAGCACCTGTCCTTCCTTGCCTTCACTT +
Preference number: 6 (lower is better)
Translates to: AKILGSFGMAPDRIL*MREHSSTCPSLPSL
Trigger: AAGTGAAGGCAAGGAAGGACAGGTGCTAGAATGCTCCCTCATCAACAGTATTCGGTCGGGAGCCATACCAAAGGATCCCAAAATCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS CAA 90 bp TGGTTTATTTCCCTCATTTCGAAGGGAAATGTGTCGATATCCGGCTaGGAGGCCATCAAGCGGGAGGATCCTCTGGCCAATCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: WFISLISKGNVSISG*EAIKREDPLANQLV
Trigger: AACAAGCTGATTGGCCAGAGGATCCTCCCGCTTGATGGCCTCCAAGCCGGATATCGACACATTTCCCTTCGAAATGAGGGAAATAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS TCA 72 bp GGCCATGATTATATTCAAGACTGGGCAGCTCTGGACTaGCTGCAGGTGATGTCCACTTCGTCAAACTCACAG +
Preference number: 6 (lower is better)
Translates to: GHDYIQDWAALD*LQVMSTSSNSQ
Trigger: CTGTGAGTTTGACGAAGTGGACATCACCTGCAGTCAGTCCAGAGCTGCCCAGTCTTGAATATAATCATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000407043.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
CDS CCA 72 bp GGGGTCAAATGTTCGATCAGGCCGCCTCATGAAATCTaGTTTGAGAAGGTACCCGCACGATCCATTATACTC +
Preference number: 6 (lower is better)
Translates to: GVKCSIRPPHEI*FEKVPARSIIL
Trigger: GAGTATAATGGATCGTGCGGGTACCTTCTCAAACCAGATTTCATGAGGCGGCCTGATCGAACATTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CAA 72 bp AGGCATGTCATTGGACTGACGTTGTTGGCCCTGAAGTaGTGTATGATTGATCTCAGGCCTTCTACCCATTGC +
Preference number: 6 (lower is better)
Translates to: RHVIGLTLLALK*CMIDLRPSTHC
Trigger: GCAATGGGTAGAAGGCCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS CAA 90 bp CTGAGGTGCAGGTCTCGGATTTCTTGCTCCTCAGCACTGTGGGTATaGATCATTTCTGACCATTCCTTTGTGTGCTGTGCTACAATCTCT +
Preference number: 6 (lower is better)
Translates to: LRCRSRISCSSALWV*IISDHSFVCCATIS
Trigger: AGAGATTGTAGCACAGCACACAAAGGAATGGTCAGAAATGATCAATACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCTGCACCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CAA 90 bp GTGGGTTTGCTGCTTCAGTTTGCATTTTGGAGTTTCATACTACTGTaGCTGGTCTGCGGTCCATCTCGGCTTCCAATTTCACCATCTGCT +
Preference number: 6 (lower is better)
Translates to: VGLLLQFAFWSFILL*LVCGPSRLPISPSA
Trigger: AGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAGTATGAAACTCCAAAATGCAAACTGAAGCAGCAAACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CAA 90 bp GCCAATTTCATCCAGTGTTTCTTGAGGCATGTCATTGGACTGACGTaGTTGGCCCTGAAGTTGTGTATGATTGATCTCAGGCCTTCTACC +
Preference number: 6 (lower is better)
Translates to: ANFIQCFLRHVIGLT*LALKLCMIDLRPST
Trigger: GGTAGAAGGCCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGCCTCAAGAAACACTGGATGAAATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS CAA 90 bp GTCACATTTGCTTTGGCGGTGTTGGCCTTTCCTTTCTTGTCATTTTaGGAAGTGTCACTGGGCACGTCGGCTATGTCACTAGTTTCAATG +
Preference number: 6 (lower is better)
Translates to: VTFALAVLAFPFLSF*EVSLGTSAMSLVSM
Trigger: CATTGAAACTAGTGACATAGCCGACGTGCCCAGTGACACTTCCAAAAATGACAAGAAAGGAAAGGCCAACACCGCCAAAGCAAATGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS TCA 72 bp GGTCTCGGATTTCTTGCTCCTCAGCACTGTGGGTATTaGTCATTTCTGACCATTCCTTTGTGTGCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: GLGFLAPQHCGY*SFLTIPLCAVL
Trigger: TAGCACAGCACACAAAGGAATGGTCAGAAATGATCAATACCCACAGTGCTGAGGAGCAAGAAATCCGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS GCA 72 bp GGCTTTGCTATTTTCCATAGAAATCTTAGCCTGGTGTaGTCGCATTTCCTTGCTTTCCCTGTCATGGGACAG +
Preference number: 6 (lower is better)
Translates to: GFAIFHRNLSLV*SHFLAFPVMGQ
Trigger: CTGTCCCATGACAGGGAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS GCA 72 bp ATCTGCTGCATCTCCTTCGCCTTGCGTTTGGGACACTaGATGACAGGATTTCAAAAGCTGCTCATTCTGTTT +
Preference number: 6 (lower is better)
Translates to: ICCISFALRLGH*MTGFQKLLILF
Trigger: AAACAGAATGAGCAGCTTTTGAAATCCTGTCATGCAGTGTCCCAAACGCAAGGCGAAGGAGATGCAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378473.9
ENST00000378501.2
ENST00000492632.5
CDS CAA 72 bp CAGTGTTTCTTGAGGCATGTCATTGGACTGACGTTGTaGGCCCTGAAGTTGTGTATGATTGATCTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: QCFLRHVIGLTL*ALKLCMIDLRP
Trigger: AGGCCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGCCTCAAGAAACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS CAA 72 bp AGGTCTCGGATTTCTTGCTCCTCAGCACTGTGGGTATaGATCATTTCTGACCATTCCTTTGTGTGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: RSRISCSSALWV*IISDHSFVCCA
Trigger: AGCACAGCACACAAAGGAATGGTCAGAAATGATCAATACCCACAGTGCTGAGGAGCAAGAAATCCGAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS TCA 72 bp TGGACTGACGTTGTTGGCCCTGAAGTTGTGTATGATTaGTCTCAGGCCTTCTACCCATTGCTTAGTTACTTC +
Preference number: 6 (lower is better)
Translates to: WTDVVGPEVVYD*SQAFYPLLSYF
Trigger: GAAGTAACTAAGCAATGGGTAGAAGGCCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS GCA 72 bp TTTGCATTTTGGAGTTTCATACTACTGTTGCTGGTCTaGGGTCCATCTCGGCTTCCAATTTCACCATCTGCT +
Preference number: 6 (lower is better)
Translates to: FAFWSFILLLLV*GPSRLPISPSA
Trigger: AGCAGATGGTGAAATTGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAGTATGAAACTCCAAAATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 72 bp TGCTTCAGTTTGCATTTTGGAGTTTCATACTACTGTTaGTGGTCTGCGGTCCATCTCGGCTTCCAATTTCAC +
Preference number: 6 (lower is better)
Translates to: CFSLHFGVSYYC*WSAVHLGFQFH
Trigger: GTGAAATTGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAGTATGAAACTCCAAAATGCAAACTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 72 bp CTGATGGCTTTGCTATTTTCCATAGAAATCTTAGCCTaGTGTGCTCGCATTTCCTTGCTTTCCCTGTCATGG +
Preference number: 6 (lower is better)
Translates to: LMALLFSIEILA*CARISLLSLSW
Trigger: CCATGACAGGGAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCCATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CCA 72 bp TTTTCATTTCCCAAACTAGTTCCTCCAGTGTCCCTCTaGTTCCCAGAGCTGGTTAGTCTAGTGATGCAACTT +
Preference number: 6 (lower is better)
Translates to: FSFPKLVPPVSL*FPELVSLVMQL
Trigger: AAGTTGCATCACTAGACTAACCAGCTCTGGGAACCAGAGGGACACTGGAGGAACTAGTTTGGGAAATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
CDS CAA 72 bp ATCCAGTGTTTCTTGAGGCATGTCATTGGACTGACGTaGTTGGCCCTGAAGTTGTGTATGATTGATCTCAGG +
Preference number: 6 (lower is better)
Translates to: IQCFLRHVIGLT*LALKLCMIDLR
Trigger: CCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGCCTCAAGAAACACTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS CAA 90 bp TTGCCTTCACTTCTCCATGTCAGAAAGAAGCCAAACTCATCCACTTaGAAGAGGCAGTTGGGTTCAAACACAAAGGATTCCTCCTCGTAT +
Preference number: 6 (lower is better)
Translates to: LPSLLHVRKKPNSST*KRQLGSNTKDSSSY
Trigger: ATACGAGGAGGAATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGGCTTCTTTCTGACATGGAGAAGTGAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS CAA 90 bp TGTTTCTTGAGGCATGTCATTGGACTGACGTTGTTGGCCCTGAAGTaGTGTATGATTGATCTCAGGCCTTCTACCCATTGCTTAGTTACT +
Preference number: 6 (lower is better)
Translates to: CFLRHVIGLTLLALK*CMIDLRPSTHCLVT
Trigger: AGTAACTAAGCAATGGGTAGAAGGCCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGCCTCAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS CAA 90 bp AATTTCATCCAGTGTTTCTTGAGGCATGTCATTGGACTGACGTTGTaGGCCCTGAAGTTGTGTATGATTGATCTCAGGCCTTCTACCCAT +
Preference number: 6 (lower is better)
Translates to: NFIQCFLRHVIGLTL*ALKLCMIDLRPSTH
Trigger: ATGGGTAGAAGGCCTGAGATCAATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGCCTCAAGAAACACTGGATGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS CCA 72 bp TGCCAATTTCATCCAGTGTTTCTTGAGGCATGTCATTaGACTGACGTTGTTGGCCCTGAAGTTGTGTATGAT +
Preference number: 6 (lower is better)
Translates to: CQFHPVFLEACH*TDVVGPEVVYD
Trigger: ATCATACACAACTTCAGGGCCAACAACGTCAGTCCAATGACATGCCTCAAGAAACACTGGATGAAATTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000492632.5
CDS CCA 72 bp TTCAGTTTGCATTTTGGAGTTTCATACTACTGTTGCTaGTCTGCGGTCCATCTCGGCTTCCAATTTCACCAT +
Preference number: 6 (lower is better)
Translates to: FSLHFGVSYYCC*SAVHLGFQFHH
Trigger: ATGGTGAAATTGGAAGCCGAGATGGACCGCAGACCAGCAACAGTAGTATGAAACTCCAAAATGCAAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CAA 72 bp CTTCTCCATGTCAGAAAGAAGCCAAACTCATCCACTTaGAAGAGGCAGTTGGGTTCAAACACAAAGGATTCC +
Preference number: 6 (lower is better)
Translates to: LLHVRKKPNSST*KRQLGSNTKDS
Trigger: GGAATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGGCTTCTTTCTGACATGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS CAA 90 bp CTCCATGTCAGAAAGAAGCCAAACTCATCCACTTTGAAGAGGCAGTaGGGTTCAAACACAAAGGATTCCTCCTCGTATCTGTCAAAAACT +
Preference number: 6 (lower is better)
Translates to: LHVRKKPNSSTLKRQ*GSNTKDSSSYLSKT
Trigger: AGTTTTTGACAGATACGAGGAGGAATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGGCTTCTTTCTGACATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS TCA 72 bp TTCTCCATGTCAGAAAGAAGCCAAACTCATCCACTTTaGAGAGGCAGTTGGGTTCAAACACAAAGGATTCCT +
Preference number: 6 (lower is better)
Translates to: FSMSERSQTHPL*RGSWVQTQRIP
Trigger: AGGAATCCTTTGTGTTTGAACCCAACTGCCTCTTCAAAGTGGATGAGTTTGGCTTCTTTCTGACATGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS TCA 72 bp AGCCAGGTCCGGCAGGATCACCTTCCGAAATACAAATaGCTCTTCATTGTAAACTGGATTGAGTCCATTATT +
Preference number: 6 (lower is better)
Translates to: SQVRQDHLPKYK*LFIVNWIESII
Trigger: AATAATGGACTCAATCCAGTTTACAATGAAGAGTCATTTGTATTTCGGAAGGTGATCCTGCCGGACCTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 72 bp AAACACAAAGGATTCCTCCTCGTATCTGTCAAAAACTaGTCCTTCTTGCAAAAAGGAGGGAACTTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: KHKGFLLVSVKN*SFLQKGGNFLL
Trigger: CAGAAGGAAGTTCCCTCCTTTTTGCAAGAAGGAGCAGTTTTTGACAGATACGAGGAGGAATCCTTTGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS GCA 72 bp ATGGATATTAGTGGTAGCACCTACATATTTATAAGATaGCATCCACGCCTGCTCATCTTCTACAGTGACCAG +
Preference number: 6 (lower is better)
Translates to: MDISGSTYIFIR*HPRLLIFYSDQ
Trigger: CTGGTCACTGTAGAAGATGAGCAGGCGTGGATGGCATCTTATAAATATGTAGGTGCTACCACTAATATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 72 bp CTTTGTCATACTGTGCCACAATTTTGTCAACTTGCGTaGAGTGTAACTTCTGCATGGTACTGTGTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: LCHTVPQFCQLA*SVTSAWYCVPL
Trigger: CAAAGGAACACAGTACCATGCAGAAGTTACACTGCACGCAAGTTGACAAAATTGTGGCACAGTATGACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS TCA 72 bp TTCTTTCCACTGGGAAGACCTAACTCCTTGAGTGCTTaGAAGATCACCTTTTCTGTTTTTCCCGATGCAAAT +
Preference number: 6 (lower is better)
Translates to: FFPLGRPNSLSA*KITFSVFPDAN
Trigger: ATTTGCATCGGGAAAAACAGAAAAGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTCCCAGTGGAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS TCA 72 bp TTTCATCATTCTTTCCACTGGGAAGACCTAACTCCTTaGGTGCTTGAAAGATCACCTTTTCTGTTTTTCCCG +
Preference number: 6 (lower is better)
Translates to: FHHSFHWEDLTP*VLERSPFLFFP
Trigger: CGGGAAAAACAGAAAAGGTGATCTTTCAAGCACTCAAGGAGTTAGGTCTTCCCAGTGGAAAGAATGATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 72 bp CAGTGGGCAACCCATACATATCCACCTCTACGTAGGTaGCAATTTTCTTATCTGATAAGAATTGACCTGATA +
Preference number: 6 (lower is better)
Translates to: QWATHTYPPLRR*QFSYLIRIDLI
Trigger: TATCAGGTCAATTCTTATCAGATAAGAAAATTGGCACCTACGTAGAGGTGGATATGTATGGGTTGCCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 72 bp GCCACAATTTTGTCAACTTGCGTGCAGTGTAACTTCTaGATGGTACTGTGTTCCTTTGCATGTTTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: ATILSTCVQCNF*MVLCSFACFFF
Trigger: AAAGAAGAAACATGCAAAGGAACACAGTACCATGCAGAAGTTACACTGCACGCAAGTTGACAAAATTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CCA 72 bp CTGATGGCTTTGCTATTTTCCATAGAAATCTTAGCCTaGTGTGCTCGCATTTCCTTGCTTTCCCTTAGATTT +
Preference number: 6 (lower is better)
Translates to: LMALLFSIEILA*CARISLLSLRF
Trigger: AAATCTAAGGGAAAGCAAGGAAATGCGAGCACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492632.5
CDS CAA 90 bp AAACACAAAGGATTCCTCCTCGTATCTGTCAAAAACTGCTCCTTCTaGCAAAAAGGAGGGAACTTCCTTCTGCCAGTTAAATTCATAAGG +
Preference number: 6 (lower is better)
Translates to: KHKGFLLVSVKNCSF*QKGGNFLLPVKFIR
Trigger: CCTTATGAATTTAACTGGCAGAAGGAAGTTCCCTCCTTTTTGCAAGAAGGAGCAGTTTTTGACAGATACGAGGAGGAATCCTTTGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000407043.6
ENST00000414679.6
ENST00000416836.5
ENST00000437503.5
ENST00000441846.5
ENST00000492632.5
CDS CAA 90 bp TCCCGTTCTGCTTTATTCTTGATAGATTTATCTTGGCTGATGGCTTaGCTATTTTCCATAGAAATCTTAGCCTGGTGTGCTCGCATTTCC +
Preference number: 6 (lower is better)
Translates to: SRSALFLIDLSWLMA*LFSIEILAWCARIS
Trigger: GGAAATGCGAGCACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGATAAATCTATCAAGAATAAAGCAGAACGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS GCA 72 bp AAGTTTGTGAGTGAGTCTTTTGATGCTTTGTGGGTTTaGTGCTTCAGTTTGCATTTTGGAGTTTCATACTAC +
Preference number: 6 (lower is better)
Translates to: KFVSESFDALWV*CFSLHFGVSYY
Trigger: GTAGTATGAAACTCCAAAATGCAAACTGAAGCAGCAAACCCACAAAGCATCAAAAGACTCACTCACAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5
CDS CAA 72 bp GCTTTATTCTTGATAGATTTATCTTGGCTGATGGCTTaGCTATTTTCCATAGAAATCTTAGCCTGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: ALFLIDLSWLMA*LFSIEILAWCA
Trigger: AGCACACCAGGCTAAGATTTCTATGGAAAATAGCAAAGCCATCAGCCAAGATAAATCTATCAAGAATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000278655.8
ENST00000378473.9
ENST00000378493.5
ENST00000378501.2
ENST00000414679.6
ENST00000464199.5
ENST00000473151.5
ENST00000482123.1
ENST00000492632.5