RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLCB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000149782

Ensembl transcript IDs: ENST00000279230.12, ENST00000325234.5, ENST00000536243.1, ENST00000540288.5

Found 695 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTaGCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: CCEPSPALEPALWAL*HFSLVLRHGTGPGW
Trigger: CCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR TCA 90 bp ACCACGGAGGGTCCAGGCCTGCCCTGCCTCCAGGTCAGGACGTCTTaGCTTAGCTGTGGCCTAGCACACGACAGATGGCTCCGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: TTEGPGLPCLQVRTS*LSCGLAHDRWLRAS
Trigger: TGAGGCCCGGAGCCATCTGTCGTGTGCTAGGCCACAGCTAAGTCAAGACGTCCTGACCTGGAGGCAGGGCAGGCCTGGACCCTCCGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTaGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCCTGCCT +
Preference number: 1 (lower is better)
Translates to: LCHFSLVLRHGTGPG*LKTVHHGGSRPALP
Trigger: AGGCAGGGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 90 bp GCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATaGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTC +
Preference number: 1 (lower is better)
Translates to: ARTVGSLPLFAGLEA*DRSRLAEDSPPRRV
Trigger: GACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 90 bp GAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTaGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCTACTCCGGA +
Preference number: 1 (lower is better)
Translates to: ELGDRAASHRRSEEV*GHCIDPEGGGPYSG
Trigger: TCCGGAGTAGGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 90 bp GCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTaGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGG +
Preference number: 1 (lower is better)
Translates to: AAEEPRYGIHWSEQN*GIGQRPTEEVRKSG
Trigger: CCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 90 bp GGAAGGTGGGAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTaGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAA +
Preference number: 1 (lower is better)
Translates to: GRWELAAEEPRYGIH*SEQNWGIGQRPTEE
Trigger: TTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTCCCACCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR GCA 90 bp TGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGGGTCCAGGCCTGCCCTaGCTCCAGGTCAGGACGTCT +
Preference number: 2 (lower is better)
Translates to: CEPSPALEPALWALCHFSGPGLP*LQVRTS
Trigger: AGACGTCCTGACCTGGAGGCAGGGCAGGCCTGGACC...CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR CCA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGGGACAGGTCCAGGCTaGCTGAAGACAGTCCACCAC +
Preference number: 2 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFGTGPG*LKTVHH
Trigger: GTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR TCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGGGGGCCCCAGGAGGATaGAGGGAGTTAGCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: APSLQPALPGKGGDAASSGAPGG*RELAEV
Trigger: TACCTCAGCTAACTCCCTTCATCCTCCTGGGGCCCC...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGTGTCATTGCCTCCTaGCCTCCACCCAGCGCCCGC +
Preference number: 2 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPSVIAS*PPPSAR
Trigger: GCGGGCGCTGGGTGGAGGGCAGGAGGCAATGACACT...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR CAA 90 bp GCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGTCTaGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCAC +
Preference number: 2 (lower is better)
Translates to: ALEPALWALCHFSLV*RHGTGPGWLKTVHH
Trigger: GTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGTGTCATTGCCTCCTaGCCTCCACCCAGCGCCCGC +
Preference number: 2 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLSVIAS*PPPSAR
Trigger: GCGGGCGCTGGGTGGAGGGCAGGAGGCAATGACACT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR-3UTR TCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAATGAAGGGAGTTAGCTaGGGTACTTGCCCCGGGTTT +
Preference number: 2 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAMKGVS*GTCPGF
Trigger: AAACCCGGGGCAAGTACCTCAGCTAACTCCCTTCAT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR-3UTR CCA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTGAGGCCGCCTTCCCCTaGAGGAGGGATGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: VFEDLGTDLECVPQWTPAEAAFP*RRDAGG
Trigger: CCCGCCTGCATCCCTCCTCCAGGGGAAGGCGGCCTC...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR TCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGGGGGCCCCAGGAGGATaGAGGGAGTTAGCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRGAPGG*RELAEV
Trigger: TACCTCAGCTAACTCCCTTCATCCTCCTGGGGCCCC...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR-3UTR TCA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGACTTTTCGCTGGTCTTaGGGCATGGGACAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRTFRWS*GMGQVQ
Trigger: CTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGT...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR GCA 90 bp ATACTCAATTGGCAGGAGATAAGCCCAGATAAGAGGCCGCCTTCCCCTGGAGGAGAGGCCTTGAAGAGGTaGCAAGCCGACCCTGCTGCG +
Preference number: 2 (lower is better)
Translates to: ILNWQEISPDKRPPSPGGEALKR*QADPAA
Trigger: CGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTC...TCCTCCAGGGGAAGGCGGCCTCTTATCTGGGCTTATCTCCTGCCAATTGAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR CCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTAGCACACGACAGATaGCTCCGGGCCTCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTLAHDR*LRASVS
Trigger: GGAGACTGAGGCCCGGAGCCATCTGTCGTGTGCTAG...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR CCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGCTGGTCTTGAGGCATaGGACAGGTCCAGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWAGLEA*DRSRLA
Trigger: AGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGC...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR CCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTGGAGCCCGCACTGTaGGCTCTCTGCCACTTTTCG +
Preference number: 2 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQLEPAL*ALCHFS
Trigger: CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAG...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR GCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGCACTGTGGGCTCTCTaGCACTTTTCGCTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWALWAL*HFSLVL
Trigger: CAAGACCAGCGAAAAGTGGCAGAGAGCCCACAGTGC...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR CCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCACTAGAGTCAGGAAGGTaGGAGTTGGCTGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPLESGR*ELAAEE
Trigger: CTCCTCAGCAGCCAACTCCCACCTTCCTGACTCTAG...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 72 bp TGCTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTaGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCAT +
Preference number: 3 (lower is better)
Translates to: CCEPSPALEPAL*ALCHFSLVLRH
Trigger: ATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR GCA 72 bp CTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTaGCCTGCCTCCAGGTCAGGACGTCTTGACTTAGCT +
Preference number: 3 (lower is better)
Translates to: LAEDSPPRRVQA*PASRSGRLDLA
Trigger: AGCTAAGTCAAGACGTCCTGACCTGGAGGCAGGGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 72 bp TTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTaGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCT +
Preference number: 3 (lower is better)
Translates to: FSLVLRHGTGPG*LKTVHHGGSRP
Trigger: AGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 72 bp GATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTaGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: DRAASHRRSEEV*GHCIDPEGGGP
Trigger: GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 72 bp GTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATaGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCA +
Preference number: 3 (lower is better)
Translates to: VGSLPLFAGLEA*DRSRLAEDSPP
Trigger: TGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR CAA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTAAAGCATTAGTGTCATaGCCTCCTGCCCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: REETLLARGCGCHREQSPKALVS*PPALHP
Trigger: TGGGTGGAGGGCAGGAGGCAATGACACTAATGCTTT...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR-3UTR CAA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACAAAGCATTAGTGTCATaGCCTCCTGCCCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: LARGCGCHREQSPDQGPNKALVS*PPALHP
Trigger: TGGGTGGAGGGCAGGAGGCAATGACACTAATGCTTT...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR CCA 72 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTaGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCC +
Preference number: 3 (lower is better)
Translates to: ELAAEEPRYGIH*SEQNWGIGQRP
Trigger: GGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 72 bp GAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTaGACACCAGCTAGAGTCAGGAAGGTGGGAGTTGGC +
Preference number: 3 (lower is better)
Translates to: EDLGTDLECVPQ*TPARVRKVGVG
Trigger: GCCAACTCCCACCTTCCTGACTCTAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 72 bp GAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTaGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGG +
Preference number: 3 (lower is better)
Translates to: EPRYGIHWSEQN*GIGQRPTEEVR
Trigger: CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR-3UTR CAA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCACTTTTCGCTGGTCTaGAGGCATGGGACAGGTCCA +
Preference number: 3 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQHFSLV*RHGTGP
Trigger: TGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTG...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CCA 72 bp ACATTCAGCTGGTATTTGAGGACCTGGGAACTGACTTaGAGTGTGTCCCTCAGTGGACACCAGCTAGAGTCA +
Preference number: 3 (lower is better)
Translates to: TFSWYLRTWELT*SVSLSGHQLES
Trigger: TGACTCTAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTCCGGCGGATCTCCTaGGGGAGCCTCGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CEPSPALEPALWALCHFSLRRIS*GSLARC
Trigger: GCAGCGGGCGAGGCTCCCCCAGGAGATCCGCCGGAG...CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGGTGGGCGGCTCCAACTaGAGCGCGTGGACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSVGGSN*SAWTPG
Trigger: GCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCAC...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGTGGGCGGCTCCAACTaGAGCGCGTGGACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRVGGSN*SAWTPG
Trigger: GCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCAC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTATCAGCGCCCGACAGGTaGCCGCTGCTCCCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLSAPDR*PLLPGA
Trigger: CGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGA...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTCCAACTGCAGCGCGTaGACGCCGGGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSSNCSA*TPGWAP
Trigger: GGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCACTCCGGCGGATCTCCTaGGGGAGCCTCGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGALRRIS*GSLARC
Trigger: GCAGCGGGCGAGGCTCCCCCAGGAGATCCGCCGGAG...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTACTGCTCCCGGGTGCGTaGCCGTTGCTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLLLPGA*PLLAQA
Trigger: GGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAG...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCCGACAGGTGCCCGCTaGTCCCGGGTGCGTGACCGT +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREPTGAR*SRVRDR
Trigger: ACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTCAGGTCCTGGGGGCTaGGCAGGGGAACGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSSGPGG*AGERLG
Trigger: CCCCAGGCGTTCCCCTGCCCAGCCCCCAGGACCTGA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCCGGCCCATCAGGTCCTaGGGGCTGGGCAGGGGAACG +
Preference number: 4 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPRPIRS*GLGRGT
Trigger: CGTTCCCCTGCCCAGCCCCCAGGACCTGATGGGCCG...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGAGCTGCCGGGCCCTCTaGTCCATCAGGCTGACGTGC +
Preference number: 4 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWSCRAL*SIRLTC
Trigger: GCACGTCAGCCTGATGGACCAGAGGGCCCGGCAGCT...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGGTGCGTGACCGTTGCTaGCACAGGCCACCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CEPSPALEPALWALCHFSVRDRC*HRPPEA
Trigger: GGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCAC...CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGAGCTGGGAGAGGCCTTaGAGAGGTGCCAAGCCGACC +
Preference number: 4 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWSWERP*RGAKPT
Trigger: GGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCT...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGACTGGGAGACCCCAGCTaGGGGGAGGAGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARLGDPS*GEEGSV
Trigger: CACCGAGCCCTCCTCCCCGCAGCTGGGGTCTCCCAG...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGTCAGCGCCCGACAGGTaGCCGCTGCTCCCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMSAPDR*PLLPGA
Trigger: CGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGA...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGGGTCTCCACCACGGTaGGCGGCTCCAACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAGSPPR*AAPTAA
Trigger: CGCTGCAGTTGGAGCCGCCCACCGTGGTGGAGACCC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCGGATCTTGGGGTCCTTaGGCAGGCGGGCGTACCGGC +
Preference number: 4 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPGSWGP*AGGRTG
Trigger: GCCGGTACGCCCGCCTGCCCAAGGACCCCAAGATCC...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCGGGCAGGGGAACGCCTaGGGCCAGCGGGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPGQGNA*GQRVLV
Trigger: GACAAGTACCCGCTGGCCCCAGGCGTTCCCCTGCCC...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGGCAGCTGTCAGAGCTaGGAGACCCCAGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAGSCQS*ETPAAG
Trigger: CCCCGCAGCTGGGGTCTCCCAGCTCTGACAGCTGCC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCTCCGGCGGATCTCCTaGGGGAGCCTCGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPLRRIS*GSLARC
Trigger: GCAGCGGGCGAGGCTCCCCCAGGAGATCCGCCGGAG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCTTGAACGAGTTCCCCTaGGAGGTCCGGGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFLNEFP*EVRVRY
Trigger: GTACCGCACCCGGACCTCTCAGGGGAACTCGTTCAA...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCCGGCTCCGGAGCTTaGCCAGAGCCTTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLAGSGA*PEPCDL
Trigger: GAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCTGCTCCCGGGTGCGTaGCCGTTGCTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPLLPGA*PLLAQA
Trigger: GGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGTGGGCGGCTCCAACTaGAGCGCGTGGACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGVGGSN*SAWTPG
Trigger: GCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCAC...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGGAGTCCACGCGGGTaGCCTTGGGGTAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPRSPRG*PWGRCG
Trigger: GCCGCATCTACCCCAAGGGCACCCGCGTGGACTCCT...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGCCGCAGCCGGCACCTaGCCTCAGCCTGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPAAAGT*PQPVPE
Trigger: CTCAGGCACAGGCTGAGGGCAGGTGCCGGCTGCGGC...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGGCCGCAGCCGGCACCTaGCCTCAGCCTGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMAAAGT*PQPVPE
Trigger: CTCAGGCACAGGCTGAGGGCAGGTGCCGGCTGCGGC...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCGGGTGCGTGACCGTTaGTGGCACAGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHRERVRDR*WHRPPE
Trigger: CTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGCGGGTGCGTGACCGTTaGTGGCACAGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSRVRDR*WHRPPE
Trigger: CTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCG...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCCGACAGGTGCCCGCTaGTCCCGGGTGCGTGACCGT +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPPTGAR*SRVRDR
Trigger: ACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTCCAACTGCAGCGCGTaGACGCCGGGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNSNCSA*TPGWAP
Trigger: GGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGTCCAACTGCAGCGCGTaGACGCCGGGCTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VGSLPLFAGLEAWDRSRLSNCSA*TPGWAP
Trigger: GGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGA...CAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCGGCCCATCAGGTCCTaGGGGCTGGGCAGGGGAACG +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPRPIRS*GLGRGT
Trigger: CGTTCCCCTGCCCAGCCCCCAGGACCTGATGGGCCG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGGCAGGCACAGCGGTTaGTTGGCCTCGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLGRHSG*LASFRR
Trigger: CCTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGGCAGGCACAGCGGTTaGTTGGCCTCGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAGRHSG*LASFRR
Trigger: CCTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGAGCTGCCGGGCCCTCTaGTCCATCAGGCTGACGTGC +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHRESCRAL*SIRLTC
Trigger: GCACGTCAGCCTGATGGACCAGAGGGCCCGGCAGCT...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAAGCTGCCGGGCCCTCTaGTCCATCAGGCTGACGTGC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLSCRAL*SIRLTC
Trigger: GCACGTCAGCCTGATGGACCAGAGGGCCCGGCAGCT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGCTCATCCAGCGGGGTaGGGGCCACCTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRAHPAG*GPPLRG
Trigger: TCCTCTCAGAGGTGGCCCCCACCCCGCTGGATGAGC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGCTCATCCAGCGGGGTaGGGGCCACCTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAAHPAG*GPPLRG
Trigger: TCCTCTCAGAGGTGGCCCCCACCCCGCTGGATGAGC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCATGTTCCAGCCTCCGCTaGGCCTCTGCGTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGACSSLR*ASASTW
Trigger: CCAGGTGGACGCAGAGGCCCAGCGGAGGCTGGAACA...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGTGCGTGACCGTTGCTaGCACAGGCCACCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAVRDRC*HRPPEA
Trigger: GGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCAC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp TGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGAGCCCGCACTGTaGGCTCTCTGCCACTTTTCG +
Preference number: 4 (lower is better)
Translates to: CEPSPALEPALWALCHFSLEPAL*ALCHFS
Trigger: CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAG...CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGGGTACAGCACTTCGTTaGGTCTCGGGTCGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWGTALR*VSGRVA
Trigger: AGCAACGCGACCCGAGACTCAACGAAGTGCTGTACC...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTACGTCCCACACGGGGTTaGACGAGTTCCCCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLRPTRG*TSSPER
Trigger: CCTCTCAGGGGAACTCGTTCAACCCCGTGTGGGACG...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGGCTGCAATGCGAAGTaGAGCCAGCGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAGCNAK*SQRGQH
Trigger: GTGCTGCCCACGCTGGCTTCACTTCGCATTGCAGCC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCCTCACTCTCCCCAATaGGGGCGGCCAGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNPHSPQ*GRPAAG
Trigger: CCCGGCAGCTGGCCGCCCTCATTGGGGAGAGTGAGG...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGTGGGGGCCACCTCTaGGAGGATGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARGGGHL*EDAGDE
Trigger: CTCATCGCCAGCATCCTCTCAGAGGTGGCCCCCACC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAAGGGCAGAATTGCTCTaGTCCAGGGGCCGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLRAELL*SRGRLR
Trigger: GCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGAGGGCAGAATTGCTCTaGTCCAGGGGCCGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRRAELL*SRGRLR
Trigger: GCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCT...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTACGCTCAGGGCAGAATTaGTCTGCTCCAGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLRSGQN*SAPGAA
Trigger: AGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCG...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAAGGAGTCCACGCGGGTaGCCTTGGGGTAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARRSPRG*PWGRCG
Trigger: GCCGCATCTACCCCAAGGGCACCCGCGTGGACTCCT...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCTCCGGGTGCGGTACTTaGGCCGCGTATCAACAGGGA +
Preference number: 4 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPASGCGT*AAYQQG
Trigger: TCCCTGTTGATACGCGGCGCAAGTACCGCACCCGGA...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCCCTGAGAGGTCCGGGTaGGGTACTTGCGCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPPERSG*GTCAAY
Trigger: ATACGCGGCGCAAGTACCGCACCCGGACCTCTCAGG...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGATGAGGGCGGCCAGCTaGCGGGCCCTCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMMRAAS*RALWSI
Trigger: GATGGACCAGAGGGCCCGGCAGCTGGCCGCCCTCAT...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGACGCAGGTCTCGCTCTTaGCGGCTCCGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARRRSRS*RLRSLT
Trigger: GGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCG...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGCCGCAGCCGGCACCTaGCCTCAGCCTGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGAAAGT*PQPVPE
Trigger: CTCAGGCACAGGCTGAGGGCAGGTGCCGGCTGCGGC...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAGACGGTCATGCCGCTaGTTCTGGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGARRSCR*FWASSS
Trigger: GCTGGAGGAGGCCCAGAAGCAGCGGCATGACCGTCT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCCTTGGGCTCCTCTTCTaGCAGCTGTTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFLGLLF*QLLQDL
Trigger: CAGGTCCTGCAACAGCTGGCAGAAGAGGAGCCCAAG...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCCCGCTGCTCCCGGGTaGGTGACCGTTGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPPAAPG*VTVAGT
Trigger: TGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGCAGCCAGTTCAGAGCTaGGTGTTCTCCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWQPVQS*VFSSWL
Trigger: GAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTG...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAAGTGTCATTGCCTCCTaGCCTCCACCCAGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARSVIAS*PPPSAR
Trigger: GCGGGCGCTGGGTGGAGGGCAGGAGGCAATGACACT...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGGTATGGCTTGCCCTTaGCGCCTATCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFGMACP*RLSPAG
Trigger: TCCTGCTGGAGATAGGCGCCAAGGGCAAGCCATACC...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGGGCAGGGGAACGCCTaGGGCCAGCGGGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPGQGNA*GQRVLV
Trigger: GACAAGTACCCGCTGGCCCCAGGCGTTCCCCTGCCC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTATCAGGTCCTGGGGGCTaGGCAGGGGAACGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLSGPGG*AGERLG
Trigger: CCCCAGGCGTTCCCCTGCCCAGCCCCCAGGACCTGA...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTGTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTCAGGTCCTGGGGGCTaGGCAGGGGAACGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LWALCHFSLVLRHGTGPGSGPGG*AGERLG
Trigger: CCCCAGGCGTTCCCCTGCCCAGCCCCCAGGACCTGA...GCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGGGCAGCTGTCAGAGCTaGGAGACCCCAGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMGSCQS*ETPAAG
Trigger: CCCCGCAGCTGGGGTCTCCCAGCTCTGACAGCTGCC...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGGCACAGCGGTTGGTTaGCCTCGTTCCGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRGTAVG*PRSAGR
Trigger: TCTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCGGCACAGCGGTTGGTTaGCCTCGTTCCGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPAGTAVG*PRSAGR
Trigger: TCTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCC...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCAGGCATCCAGTGGGCTaGGGGTGGGGTTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPARHPVG*GWGLRT
Trigger: CGTCCTCAAACCCCACCCCCAGCCCACTGGATGCCT...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGTGCGTGACCGTTGCTaGCACAGGCCACCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARVRDRC*HRPPEA
Trigger: GGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCAC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTATGCGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLCVFSS*LSESAP
Trigger: GGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCA...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGTGCGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRCVFSS*LSESAP
Trigger: GGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCA...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGCTCATACTTTTCGATaGGCAGCCGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRAHTFR*AAGPGR
Trigger: CCTCCCAGGCCCGGCTGCTCATCGAAAAGTATGAGC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCATCTCGAAGGAGAGGATaGCGGGGTAGGGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASRRRG*RGRARS
Trigger: AGACCTCGCCCTACCCCGTCATCCTCTCCTTCGAGA...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCTCTCGAAGGAGAGGATaGCGGGGTAGGGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPSRRRG*RGRARS
Trigger: AGACCTCGCCCTACCCCGTCATCCTCTCCTTCGAGA...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCATCACCCAGAGACTTCTaGGGCTCCAGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASPRDF*GSRLGF
Trigger: GAAGCCCAGCCTGGAGCCTCAGAAGTCTCTGGGTGA...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCCCTGAGATCACCTTaGCCCGCAAGGCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLALRSP*PARHWP
Trigger: TGGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTATTGAACGAGTTCCCCTaGGAGGTCCGGGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLLNEFP*EVRVRY
Trigger: GTACCGCACCCGGACCTCTCAGGGGAACTCGTTCAA...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGCCTCACTCTCCCCAATaGGGGCGGCCAGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRPHSPQ*GRPAAG
Trigger: CCCGGCAGCTGGCCGCCCTCATTGGGGAGAGTGAGG...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCAAGGACGACCTCCCTaGGCCGCTGCAGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMQGRPP*AAAEPV
Trigger: GACAGGCTCTGCAGCGGCTCAGGGAGGTCGTCCTTG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTACTTCCAGGGGCAGGATaGCATTCTCCTCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLLPGAG*HSPRLP
Trigger: TGGGAGGCGAGGAGAATGGCATCCTGCCCCTGGAAG...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCACTTCCAGGGGCAGGATaGCATTCTCCTCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGALPGAG*HSPRLP
Trigger: TGGGAGGCGAGGAGAATGGCATCCTGCCCCTGGAAG...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCCTGCGCTGGGTCGGTaGCGCTTCTTGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREPALGR*RFLFFT
Trigger: GGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCCCTGCGCTGGGTCGGTaGCGCTTCTTGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPAPALGR*RFLFFT
Trigger: GGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGG...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGCTGTCTGGGCCACCTaGGCTGGGTCGGTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNAVWAT*AGSVPL
Trigger: AAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGCTGGGAGACCCCAGCTaGGGGGAGGAGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRLGDPS*GEEGSV
Trigger: CACCGAGCCCTCCTCCCCGCAGCTGGGGTCTCCCAG...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAATGAGGGCGGCCAGCTaGCGGGCCCTCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLMRAAS*RALWSI
Trigger: GATGGACCAGAGGGCCCGGCAGCTGGCCGCCCTCAT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCATGAGATCATCACGCTaGCCTGGGCTGCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPAMRSSR*PGLLRE
Trigger: CTCCCTCAGCAGCCCAGGGCAGCGTGATGATCTCAT...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCGCAGGTCTCGCTCTTaGCGGCTCCGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMRRSRS*RLRSLT
Trigger: GGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTCCGCTGATGCTTCTTaGGCAGCTCCCGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSSADAS*AAPAGL
Trigger: GAGACCTGCGGGAGCTGCGCAAGAAGCATCAGCGGA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGACCTCCCTGAGCCGCTaGAGAGCCTGTCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSTSLSR*RACLRC
Trigger: ACACCTGAGACAGGCTCTGCAGCGGCTCAGGGAGGT...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGACCTCCCTGAGCCGCTaGAGAGCCTGTCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRTSLSR*RACLRC
Trigger: ACACCTGAGACAGGCTCTGCAGCGGCTCAGGGAGGT...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGCCACAAGACGGTCATaGCGCTGCTTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARATRRS*RCFWAS
Trigger: GGAGGCCCAGAAGCAGCGGCATGACCGTCTTGTGGC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGTGTTGCAGGACCTGCTaGTGCCCAGCCACAAGACGG +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRCCRTC*CPATRR
Trigger: CCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACA...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCCCGCTGCTCCCGGGTaGGTGACCGTTGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNPAAPG*VTVAGT
Trigger: TGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGG...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGGGTCTCCACCACGGTaGGCGGCTCCAACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNGSPPR*AAPTAA
Trigger: CGCTGCAGTTGGAGCCGCCCACCGTGGTGGAGACCC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGGATCTTGGGGTCCTTaGGCAGGCGGGCGTACCGGC +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNGSWGP*AGGRTG
Trigger: GCCGGTACGCCCGCCTGCCCAAGGACCCCAAGATCC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CCA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGTGTGTTCACTGGGTCTaGCCCAGACACCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWCVHWV*PRHHRH
Trigger: ATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACA...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGGAACACTGTGTTCACTaGGTCTGGCCCAGACACCAC +
Preference number: 4 (lower is better)
Translates to: CEPSPALEPALWALCHFSEHCVH*VWPRHH
Trigger: GTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTC...CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGCGGCCCATCAGGTCCTaGGGGCTGGGCAGGGGAACG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRRPIRS*GLGRGT
Trigger: CGTTCCCCTGCCCAGCCCCCAGGACCTGATGGGCCG...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCTGGGCCACCTGCGCTaGGTCGGTGCCGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMLGHLR*VGAASC
Trigger: ACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGTGGACATCTCCTCAGTaGCATTCACCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWWTSPQ*HSPRCW
Trigger: CCAGCAGCGAGGTGAATGCCACTGAGGAGATGTCCA...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAATCATCACGCTGCCCTaGGCTGCTGAGGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAIITLP*AAEGGA
Trigger: AGCACCTCCCTCAGCAGCCCAGGGCAGCGTGATGAT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAATCATCACGCTGCCCTaGGCTGCTGAGGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLIITLP*AAEGGA
Trigger: AGCACCTCCCTCAGCAGCCCAGGGCAGCGTGATGAT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGCTCATACTTTTCGATaGGCAGCCGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARAHTFR*AAGPGR
Trigger: CCTCCCAGGCCCGGCTGCTCATCGAAAAGTATGAGC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGGACAGGAACTGCCCTaGGATCACCTTGACCCGCAA +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRGQELP*DHLDPQ
Trigger: TTGCGGGTCAAGGTGATCTCAGGGCAGTTCCTGTCC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATTGAACGAGTTCCCCTaGGAGGTCCGGGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARLNEFP*EVRVRY
Trigger: GTACCGCACCCGGACCTCTCAGGGGAACTCGTTCAA...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCGTCCCACACGGGGTTaGACGAGTTCCCCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMRPTRG*TSSPER
Trigger: CCTCTCAGGGGAACTCGTTCAACCCCGTGTGGGACG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGGCTGCAATGCGAAGTaGAGCCAGCGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPGCNAK*SQRGQH
Trigger: GTGCTGCCCACGCTGGCTTCACTTCGCATTGCAGCC...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGAGGCTTCGGTGTAGATaGGCAGGGCCGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMRLRCR*AGPAGT
Trigger: TGTGCCTGCCGGCCCTGCTCATCTACACCGAAGCCT...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGGTGGGGGCCACCTCTaGGAGGATGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLGGGHL*EDAGDE
Trigger: CTCATCGCCAGCATCCTCTCAGAGGTGGCCCCCACC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTATTGACCAGAGCCTTGTaGCCTCGGAGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLLTRAL*PRSSSS
Trigger: GCTGGATGAGCTCCGAGGTCACAAGGCTCTGGTCAA...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGCCGGCTCCGGAGCTTaGCCAGAGCCTTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNAGSGA*PEPCDL
Trigger: GAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGGCCCCAGGAGGATaGAGGGAGTTAGCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARGAPGG*RELAEV
Trigger: TACCTCAGCTAACTCCCTTCATCCTCCTGGGGCCCC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGGCGTCAGGTATGGCTTaGCCTTGGCGCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREASGMA*PWRLSP
Trigger: TGGAGATAGGCGCCAAGGGCAAGCCATACCTGACGC...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGAGTCTCGGGTCGCGTTaGTTCTGGTTGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWSLGSR*FWLMKS
Trigger: GGACTTCATCAACCAGAAGCAACGCGACCCGAGACT...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTGGGTCATGTCCGTaGTCAGATCCAGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLAGSCP*SDPGLP
Trigger: TGGAAGCCCTGGATCTGAGCACGGACATGACCCAGC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGCTGTCTGGGCCACCTaGGCTGGGTCGGTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRAVWAT*AGSVPL
Trigger: AAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCATGGCATTCACCTCGCTaGTGGCTGTGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAWHSPR*WLCPHL
Trigger: CAGATGAGGGCACAGCCAGCAGCGAGGTGAATGCCA...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGGAGTCCACGCGGGTaGCCTTGGGGTAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLRSPRG*PWGRCG
Trigger: GCCGCATCTACCCCAAGGGCACCCGCGTGGACTCCT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTACGCCCGCGTTGAGCTaGATCGCCACATCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPTPALS*IATSRV
Trigger: GACCCTCGATGTGGCGATGCAGCTCAACGCGGGCGT...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGACGCCCGCGTTGAGCTaGATCGCCACATCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMTPALS*IATSRV
Trigger: GACCCTCGATGTGGCGATGCAGCTCAACGCGGGCGT...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCCTGAGAGGTCCGGGTaGGGTACTTGCGCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMPERSG*GTCAAY
Trigger: ATACGCGGCGCAAGTACCGCACCCGGACCTCTCAGG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATCCGCTGATGCTTCTTaGGCAGCTCCCGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARSADAS*AAPAGL
Trigger: GAGACCTGCGGGAGCTGCGCAAGAAGCATCAGCGGA...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGACGGTCATGCCGCTaGTTCTGGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPRRSCR*FWASSS
Trigger: GCTGGAGGAGGCCCAGAAGCAGCGGCATGACCGTCT...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAGCTGTTGCAGGACCTaGTGCTGCCCAGCCACAAGA +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASCCRT*CCPATR
Trigger: TCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACAGCT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCTTGGGCTCCTCTTCTaGCAGCTGTTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHRELGLLF*QLLQDL
Trigger: CAGGTCCTGCAACAGCTGGCAGAAGAGGAGCCCAAG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCTCAGCGCCCGACAGGTaGCCGCTGCTCCCGGGTGCG +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTSAPDR*PLLPGA
Trigger: CGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGA...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGGGATCCGACCATCCTaGTTCACCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLGIRPS*FTCSFS
Trigger: GCTGAAGCTGCAGGTGAACCAGGATGGTCGGATCCC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGGTATGGCTTGCCCTTaGCGCCTATCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRGMACP*RLSPAG
Trigger: TCCTGCTGGAGATAGGCGCCAAGGGCAAGCCATACC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTACTCCAGCGTCAGGTATaGCTTGCCCTTGGCGCCTAT +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLLQRQV*LALGAY
Trigger: ATAGGCGCCAAGGGCAAGCCATACCTGACGCTGGAG...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCCTCCAGCGTCAGGTATaGCTTGCCCTTGGCGCCTAT +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPALQRQV*LALGAY
Trigger: ATAGGCGCCAAGGGCAAGCCATACCTGACGCTGGAG...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCACCCCATAGTAGTGCCTaGCGGTACATCTCCACCGAC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAPHSSA*RYISTD
Trigger: GTCGGTGGAGATGTACCGCCAGGCACTACTATGGGG...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGCGCGTCTCCAAAGATaGAGCGGCAGTACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAARLQR*SGSTQP
Trigger: TGGCTGAGTACTGCCGCTCCATCTTTGGAGACGCGC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGGGGCAGGGGAACGCCTaGGGCCAGCGGGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRGQGNA*GQRVLV
Trigger: GACAAGTACCCGCTGGCCCCAGGCGTTCCCCTGCCC...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTGGGCCACCTGCGCTaGGTCGGTGCCGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNLGHLR*VGAASC
Trigger: ACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAG...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGCTGGGCCACCTGCGCTaGGTCGGTGCCGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VGSLPLFAGLEAWDRSRLLGHLR*VGAASC
Trigger: ACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAG...CAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGTCTGAGGCTCCAGGCTaGGCTTCTCAAGCCCTACCT +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHRESEAPG*ASQALP
Trigger: AGGTAGGGCTTGAGAAGCCCAGCCTGGAGCCTCAGA...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGTATCCGGAGCGGATaGCAGAGACAGGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARGIRSG*QRQAGS
Trigger: GGATCCTGCCTGTCTCTGCCATCCGCTCCGGATACC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGGCAGGCACAGCGGTTaGTTGGCCTCGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGSLPLFAGLEAWDRSRLGRHSG*LASFRR
Trigger: CCTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCC...CAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTAGCTCGAGGGTGTaGGTGTCACAGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLASSRV*VSQGAK
Trigger: CTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTCCAGCTGCCCCGCAGTaGGATAGGTGTTATGCGAGG +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPPAAPQ*DRCYAR
Trigger: CCTCGCATAACACCTATCTCACTGCGGGGCAGCTGG...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGGTAGGGCGAGGTCTTaGAGGCAGTCTCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPGRARS*RQSRQW
Trigger: CCATTGCCGAGACTGCCTTCAAGACCTCGCCCTACC...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTATGTCCAGAGGCTCGATaGGTAGCGCGTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLCPEAR*VARLQR
Trigger: TCTTTGGAGACGCGCTACTCATCGAGCCTCTGGACA...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGCCCTGAGATCACCTTaGCCCGCAAGGCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPALRSP*PARHWP
Trigger: TGGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCCTCACTCTCCCCAATaGGGGCGGCCAGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTPHSPQ*GRPAAG
Trigger: CCCGGCAGCTGGCCGCCCTCATTGGGGAGAGTGAGG...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCGCCGGCTCCGGAGCTTaGCCAGAGCCTTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RRSEEVWGHCIDPEGGGPAGSGA*PEPCDL
Trigger: GAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGC...GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGTGACTGCCTTCCGCTaGTGCTTCTTGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPVTAFR*CFLRSS
Trigger: GGAGCTGCGCAAGAAGCATCAGCGGAAGGCAGTCAC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGCTGTTCTGGAACTCCTaGTACCGCTTTGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRLFWNS*YRFASS
Trigger: GGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAG...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGCAAGGACGACCTCCCTaGGCCGCTGCAGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRQGRPP*AAAEPV
Trigger: GACAGGCTCTGCAGCGGCTCAGGGAGGTCGTCCTTG...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAACGGATGGAGTTGACTaGCTCAGTGATGTGCCGACG +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLTDGVD*LSDVPT
Trigger: CGTCGGCACATCACTGAGTCAGTCAACTCCATCCGT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGGCTTCGTGTATGCTTTaGGCAGGAAGGTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREASCML*AGRCSG
Trigger: CCCGGAACACCTTCCTGCGCAAAGCATACACGAAGC...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGGTACTCAGCCATCTTTaGCTGTTGCTTTGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: CEPSPALEPALWALCHFSVLSHL*LLLCRV
Trigger: GACTCGGCAAAGCAACAGGCAAAGATGGCTGAGTAC...CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCCTGCGCTGGGTCGGTaGCGCTTCTTGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPPALGR*RFLFFT
Trigger: GGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATGGCATTCACCTCGCTaGTGGCTGTGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARWHSPR*WLCPHL
Trigger: CAGATGAGGGCACAGCCAGCAGCGAGGTGAATGCCA...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGCTGTCGGACAGGAACTaGCCTGAGATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRLSDRN*PEITLT
Trigger: GGTCAAGGTGATCTCAGGGCAGTTCCTGTCCGACAG...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCACTGTCGGACAGGAACTaGCCTGAGATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGALSDRN*PEITLT
Trigger: GGTCAAGGTGATCTCAGGGCAGTTCCTGTCCGACAG...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCTCCGGGTGCGGTACTTaGGCCGCGTATCAACAGGGA +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPSGCGT*AAYQQG
Trigger: TCCCTGTTGATACGCGGCGCAAGTACCGCACCCGGA...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTACCTGAGAGGTCCGGGTaGGGTACTTGCGCCGCGTAT +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLPERSG*GTCAAY
Trigger: ATACGCGGCGCAAGTACCGCACCCGGACCTCTCAGG...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCCTCAAAGGCTGCAATaGGAAGTGAAGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREPQRLQ*EVKPAW
Trigger: CCACGCTGGCTTCACTTCGCATTGCAGCCTTTGAGG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCCCTCAAAGGCTGCAATaGGAAGTGAAGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPAPQRLQ*EVKPAW
Trigger: CCACGCTGGCTTCACTTCGCATTGCAGCCTTTGAGG...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGCGGGTGAGGGTGACTaGCTTCCGCTGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARAGEGD*LPLMLL
Trigger: AAGAAGCATCAGCGGAAGGCAGTCACCCTCACCCGC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAAGCTCCAGCAGGCTCTaGACCTGTCTGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLSSSRL*TCLFWN
Trigger: GTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAGCT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCTCTTGGCCTCCGAGATaGTGTTATGGCGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFSWPPR*CYGAFC
Trigger: ACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGA...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCTGTTGCAGGACCTGCTaGTGCCCAGCCACAAGACGG +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPCCRTC*CPATRR
Trigger: CCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACA...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTCACCAGGTTCCGACTaGAGGTCTCCTCGTCCCATT +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSSPGSD*RSPRPI
Trigger: AATGGGACGAGGAGACCTCCAGTCGGAACCTGGTGA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CCA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCACAAGAAGAAGCCATTaGGGTCCACACGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPATRRSH*GPHAGS
Trigger: TGACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGT...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTATGTCCACCTCCATGTTaGGGCCCGTCCAGTACAAGA +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLCPPPC*GPSSTR
Trigger: TCTTGTACTGGACGGGCCCCAACATGGAGGTGGACA...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CCA 90 bp CTGTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCGAACTTCCCGGATCTTaGGGTCCTTGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LWALCHFSLVLRHGTGPGELPGS*GPWAGG
Trigger: CCCGCCTGCCCAAGGACCCCAAGATCCGGGAAGTTC...GCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGGAAGTAGGCACTCAGTaGCTGGGTCATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREEVGTQ*LGHVRA
Trigger: AGCACGGACATGACCCAGCCACTGAGTGCCTACTTC...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACAGGCAGTCTCGGCAATaGCCTCCAGCACGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNRQSRQ*PPARRA
Trigger: TGCGCGACGTGCTGGAGGCCATTGCCGAGACTGCCT...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGGCAGTCTCGGCAATaGCCTCCAGCACGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLRQSRQ*PPARRA
Trigger: TGCGCGACGTGCTGGAGGCCATTGCCGAGACTGCCT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGGCCACATCGAGGGTCTaGAAGTTGAGCGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREATSRV*KLSATS
Trigger: GCTTGTTGCGCTCAACTTCCAGACCCTCGATGTGGC...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATGGGCAGCACCACCTTaGGGAAGTCGAAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARWAAPP*GSRRAL
Trigger: AAGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCA...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGGCACAGCGGTTGGTTaGCCTCGTTCCGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLGTAVG*PRSAGR
Trigger: TCTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTGTTCCAGCCTCCGCTaGGCCTCTGCGTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRCSSLR*ASASTW
Trigger: CCAGGTGGACGCAGAGGCCCAGCGGAGGCTGGAACA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCCTAGAGTCAGGAAGGTaGGAGTTGGCTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPALESGR*ELAAEE
Trigger: CTCCTCAGCAGCCAACTCCCACCTTCCTGACTCTAG...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCGAGTGTGTCCCTCAGTaGACACCAGCTAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPAECVPQ*TPARVR
Trigger: CCTGACTCTAGCTGGTGTCCACTGAGGGACACACTC...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTCTTCAGGATGTTCTTaGCGGGGATCCGACCATCCT +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSSSGCS*RGSDHP
Trigger: AGGATGGTCGGATCCCCGTCAAGAACATCCTGAAGA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGGGTACAGCACTTCGTTaGGTCTCGGGTCGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMGTALR*VSGRVA
Trigger: AGCAACGCGACCCGAGACTCAACGAAGTGCTGTACC...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGGTAGGGCGAGGTCTTaGAGGCAGTCTCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNGRARS*RQSRQW
Trigger: CCATTGCCGAGACTGCCTTCAAGACCTCGCCCTACC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGGGACAGGAACTGCCCTaGGATCACCTTGACCCGCAA +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMGQELP*DHLDPQ
Trigger: TTGCGGGTCAAGGTGATCTCAGGGCAGTTCCTGTCC...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTAGAGGATGCTGGCGATaGGATCATCACGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPRGCWR*DHHAAL
Trigger: CAGGGCAGCGTGATGATCTCATCGCCAGCATCCTCT...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTTTGACCAGAGCCTTGTaGCCTCGGAGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPLTRAL*PRSSSS
Trigger: GCTGGATGAGCTCCGAGGTCACAAGGCTCTGGTCAA...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAACGGATGGAGTTGACTaGCTCAGTGATGTGCCGACG +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARTDGVD*LSDVPT
Trigger: CGTCGGCACATCACTGAGTCAGTCAACTCCATCCGT...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGATGAAGGGAGTTAGCTaGGGTACTTGCCCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREMKGVS*GTCPGF
Trigger: AAACCCGGGGCAAGTACCTCAGCTAACTCCCTTCAT...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGGGGCCCCAGGAGGATaGAGGGAGTTAGCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLGAPGG*RELAEV
Trigger: TACCTCAGCTAACTCCCTTCATCCTCCTGGGGCCCC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAATGAAGTCCATGAGCTaGTCCAGCGTCAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLMKSMS*SSVRYG
Trigger: GCCATACCTGACGCTGGAGCAGCTCATGGACTTCAT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAAGTCTCGGGTCGCGTTaGTTCTGGTTGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLSLGSR*FWLMKS
Trigger: GGACTTCATCAACCAGAAGCAACGCGACCCGAGACT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCCATCTTTGCCTGTTaGTTTGCCGAGTCCACATGG +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLAIFAC*FAESTW
Trigger: CCATGTGGACTCGGCAAAGCAACAGGCAAAGATGGC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCGCCATCTTTGCCTGTTaGTTTGCCGAGTCCACATGG +
Preference number: 4 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPAIFAC*FAESTW
Trigger: CCATGTGGACTCGGCAAAGCAACAGGCAAAGATGGC...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGAGGGCAGAATTGCTCTaGTCCAGGGGCCGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRRAELL*SRGRLR
Trigger: GCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCT...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGCGCTCAGGGCAGAATTaGTCTGCTCCAGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRRSGQN*SAPGAA
Trigger: AGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCG...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGGGCTCTTGGTCAGTTaGTCCATGGCCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPGLLVS*SMALVS
Trigger: GGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCC...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTCCACCTCCACGTAGATaGCCACCTTCCTGTCGGACA +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPPPPRR*PPSCRT
Trigger: TGTCCGACAGGAAGGTGGGCATCTACGTGGAGGTGG...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCCACCTCCACGTAGATaGCCACCTTCCTGTCGGACA +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMPPPRR*PPSCRT
Trigger: TGTCCGACAGGAAGGTGGGCATCTACGTGGAGGTGG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCAGACGGTCATGCCGCTaGTTCTGGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRSEEVWGHCIDPEGGGPRRSCR*FWASSS
Trigger: GCTGGAGGAGGCCCAGAAGCAGCGGCATGACCGTCT...GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGCCACAAGACGGTCATaGCGCTGCTTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRATRRS*RCFWAS
Trigger: GGAGGCCCAGAAGCAGCGGCATGACCGTCTTGTGGC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGGCCACAAGACGGTCATaGCGCTGCTTCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRATRRS*RCFWAS
Trigger: GGAGGCCCAGAAGCAGCGGCATGACCGTCTTGTGGC...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTATGCAGGACCTGCTGCTaGCCAGCCACAAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLCRTCC*PATRRS
Trigger: TGACCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCA...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTGCAGGACCTGCTGCTaGCCAGCCACAAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNCRTCC*PATRRS
Trigger: TGACCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCTTGGGCTCCTCTTCTaGCAGCTGTTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPLGLLF*QLLQDL
Trigger: CAGGTCCTGCAACAGCTGGCAGAAGAGGAGCCCAAG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCACCGACAGGTGCCCGCTaGTCCCGGGTGCGTGACCGT +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPPTGAR*SRVRDR
Trigger: ACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGG...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCAGCCAGTTCAGAGCTaGGTGTTCTCCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPQPVQS*VFSSWL
Trigger: GAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGGAGGCCTTGAAGAGGTaGCAAGCCGACCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKEALKR*QADPAA
Trigger: CGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTC...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGGAACTTCCCGGATCTTaGGGTCCTTGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRELPGS*GPWAGG
Trigger: CCCGCCTGCCCAAGGACCCCAAGATCCGGGAAGTTC...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATGTGTTCACTGGGTCTaGCCCAGACACCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARCVHWV*PRHHRH
Trigger: ATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACA...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGGGATCCGACCATCCTaGTTCACCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPGIRPS*FTCSFS
Trigger: GCTGAAGCTGCAGGTGAACCAGGATGGTCGGATCCC...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCTCCAGCGTCAGGTATaGCTTGCCCTTGGCGCCTAT +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMLQRQV*LALGAY
Trigger: ATAGGCGCCAAGGGCAAGCCATACCTGACGCTGGAG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGAGGCAGTCTCGGCAATaGCCTCCAGCACGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRRQSRQ*PPARRA
Trigger: TGCGCGACGTGCTGGAGGCCATTGCCGAGACTGCCT...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGCGCGTCTCCAAAGATaGAGCGGCAGTACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPARLQR*SGSTQP
Trigger: TGGCTGAGTACTGCCGCTCCATCTTTGGAGACGCGC...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTGGTCAGTTGCTCCATaGCCTTGGTCTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSWSVAP*PWSPQR
Trigger: CCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCATTCCACAAACTCCATaGGGCTCTTGGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFIPQTP*GSWSVA
Trigger: AGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAAT...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTTGAGCGCAACAAGCTaGCACCCTACGTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSLSATS*HPTFQK
Trigger: CTTCTGGAACGTAGGGTGCCAGCTTGTTGCGCTCAA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGAGGCATCCAGTGGGCTaGGGGTGGGGTTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRRHPVG*GWGLRT
Trigger: CGTCCTCAAACCCCACCCCCAGCCCACTGGATGCCT...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGCTCATCCAGCGGGGTaGGGGCCACCTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASHRRSEEVWGHCIDPEGAHPAG*GPPLRG
Trigger: TCCTCTCAGAGGTGGCCCCCACCCCGCTGGATGAGC...TCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGCTAGCTCGAGGGTGTaGGTGTCACAGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPASSRV*VSQGAK
Trigger: CTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
3UTR CAA 72 bp CCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGTCTaGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: PALWALCHFSLV*RHGTGPGWLKT
Trigger: TGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCATCCTGCACGGCCATaGAGTTCAAGAACACTGTGT +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHREHPARP*SSRTLC
Trigger: ACACAGTGTTCTTGAACTTCATGGCCGTGCAGGATG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGGCTCATACTTTTCGATaGGCAGCCGGGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKAHTFR*AAGPGR
Trigger: CCTCCCAGGCCCGGCTGCTCATCGAAAAGTATGAGC...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGCCAGCTGCCCCGCAGTaGGATAGGTGTTATGCGAGG +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRPAAPQ*DRCYAR
Trigger: CCTCGCATAACACCTATCTCACTGCGGGGCAGCTGG...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTCTCGAAGGAGAGGATaGCGGGGTAGGGCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRSRRRG*RGRARS
Trigger: AGACCTCGCCCTACCCCGTCATCCTCTCCTTCGAGA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTCACCCAGAGACTTCTaGGGCTCCAGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRSPRDF*GSRLGF
Trigger: GAAGCCCAGCCTGGAGCCTCAGAAGTCTCTGGGTGA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCACAGGTTCGATGTAGTTaGCAAGCGTGGACATCTCCT +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAQVRCS*QAWTSP
Trigger: AGGAGATGTCCACGCTTGTCAACTACATCGAACCTG...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCCAGGTTCGATGTAGTTaGCAAGCGTGGACATCTCCT +
Preference number: 4 (lower is better)
Translates to: KLGEALKRCQADPAASPAQVRCS*QAWTSP
Trigger: AGGAGATGTCCACGCTTGTCAACTACATCGAACCTG...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTACAAAAACGCCCGCGTTaGGCTGCATCGCCACATCGA +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLQKRPR*AASPHR
Trigger: TCGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTG...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGTGACTGCCTTCCGCTaGTGCTTCTTGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRVTAFR*CFLRSS
Trigger: GGAGCTGCGCAAGAAGCATCAGCGGAAGGCAGTCAC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCTGTTCTGGAACTCCTaGTACCGCTTTGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPLFWNS*YRFASS
Trigger: GGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTTGGCTGTGTCATCCTaGACGGCCATGAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSLAVSS*TAMKFK
Trigger: CTTGAACTTCATGGCCGTGCAGGATGACACAGCCAA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGCCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTAT +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRPSWFT*SFSFVY
Trigger: ATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGG...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAATGAAGTCCATGAGCTaGTCCAGCGTCAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARMKSMS*SSVRYG
Trigger: GCCATACCTGACGCTGGAGCAGCTCATGGACTTCAT...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCTCTCGCTCCAGAAACTaGTGGTTGGGCTCATACTTT +
Preference number: 4 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPASRSRN*WLGSYF
Trigger: AAAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGA...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGCTTCCAGGGGCAGGATaGCATTCTCCTCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKLPGAG*HSPRLP
Trigger: TGGGAGGCGAGGAGAATGGCATCCTGCCCCTGGAAG...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGCTGTCTGGGCCACCTaGGCTGGGTCGGTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWAVWAT*AGSVPL
Trigger: AAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGC...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTCCGGGTGCGGTACTTaGGCCGCGTATCAACAGGGA +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRSGCGT*AAYQQG
Trigger: TCCCTGTTGATACGCGGCGCAAGTACCGCACCCGGA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGTCCATCAGGCTGACGTaGTTAATGGGGTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSSIRLT*LMGLIR
Trigger: CCTGATCAACCCCATTAAGCACGTCAGCCTGATGGA...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGATGAGGGCGGCCAGCTaGCGGGCCCTCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGMRAAS*RALWSI
Trigger: GATGGACCAGAGGGCCCGGCAGCTGGCCGCCCTCAT...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAATGAGATCATCACGCTaGCCTGGGCTGCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLMRSSR*PGLLRE
Trigger: CTCCCTCAGCAGCCCAGGGCAGCGTGATGATCTCAT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACATGAGATCATCACGCTaGCCTGGGCTGCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNMRSSR*PGLLRE
Trigger: CTCCCTCAGCAGCCCAGGGCAGCGTGATGATCTCAT...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGTCCGCTGATGCTTCTTaGGCAGCTCCCGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRSADAS*AAPAGL
Trigger: GAGACCTGCGGGAGCTGCGCAAGAAGCATCAGCGGA...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGCGGGTGAGGGTGACTaGCTTCCGCTGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLAGEGD*LPLMLL
Trigger: AAGAAGCATCAGCGGAAGGCAGTCACCCTCACCCGC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGTCTTGGCCTCCGAGATaGTGTTATGGCGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHRESWPPR*CYGAFC
Trigger: ACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGA...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAACTGACTCAGTGATGTaGCGACGGTTAATCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGATDSVM*RRLISV
Trigger: GACGGAGATTAACCGTCGGCACATCACTGAGTCAGT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGTGCAGGACCTGCTGCTaGCCAGCCACAAGACGGTCA +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKCRTCC*PATRRS
Trigger: TGACCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCA...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGCCCGCTGCTCCCGGGTaGGTGACCGTTGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWPAAPG*VTVAGT
Trigger: TGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGG...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGAACACTGTGTTCACTaGGTCTGGCCCAGACACCAC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPEHCVH*VWPRHH
Trigger: GTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGAACACTGTGTTCACTaGGTCTGGCCCAGACACCAC +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPEHCVH*VWPRHH
Trigger: GTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTC...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTACCTCAGACCAGACCTTaGCTGTGTCATCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLPQTRP*LCHPAR
Trigger: CCGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGG...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGGTATGGCTTGCCCTTaGCGCCTATCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNGMACP*RLSPAG
Trigger: TCCTGCTGGAGATAGGCGCCAAGGGCAAGCCATACC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGCGCTCCAGAAACTGCTaGTTGGGCTCATACTTTTCG +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRRSRNC*LGSYFS
Trigger: CGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGCG...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCGCTCCAGAAACTGCTaGTTGGGCTCATACTTTTCG +
Preference number: 4 (lower is better)
Translates to: SRGREETLLARGCGCHRERSRNC*LGSYFS
Trigger: CGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGCG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGGAAGTAGGCACTCAGTaGCTGGGTCATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMEVGTQ*LGHVRA
Trigger: AGCACGGACATGACCCAGCCACTGAGTGCCTACTTC...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGGGCAGCTGTCAGAGCTaGGAGACCCCAGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQGSCQS*ETPAAG
Trigger: CCCCGCAGCTGGGGTCTCCCAGCTCTGACAGCTGCC...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTATCTGAGGCTCCAGGCTaGGCTTCTCAAGCCCTACCT +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLSEAPG*ASQALP
Trigger: AGGTAGGGCTTGAGAAGCCCAGCCTGGAGCCTCAGA...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCCCTCATCTGTAGTTaGCTTTTTGGGGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLALICS*LFGVCL
Trigger: CAGACAGACCCCAAAAAGCCAACTACAGATGAGGGC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGTGGACATCTCCTCAGTaGCATTCACCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMWTSPQ*HSPRCW
Trigger: CCAGCAGCGAGGTGAATGCCACTGAGGAGATGTCCA...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGTTGCTCCATGGCCTTaGTCTCCACAAAGGACGACA +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARVAPWP*SPQRTT
Trigger: TGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAAC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTATGGGCAGCACCACCTTaGGGAAGTCGAAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLWAAPP*GSRRAL
Trigger: AAGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCA...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGTATCCGGAGCGGATaGCAGAGACAGGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRGIRSG*QRQAGS
Trigger: GGATCCTGCCTGTCTCTGCCATCCGCTCCGGATACC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCCTAGCACACGACAGATaGCTCCGGGCCTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRSEEVWGHCIDPEGGGPLAHDR*LRASVS
Trigger: GGAGACTGAGGCCCGGAGCCATCTGTCGTGTGCTAG...GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAGAGGCCGCCTTCCCCTaGAGGAGGGATGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLEAAFP*RRDAGG
Trigger: CCCGCCTGCATCCCTCCTCCAGGGGAAGGCGGCCTC...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGACATCCTGCACGGCCATaGAGTTCAAGAACACTGTGT +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARHPARP*SSRTLC
Trigger: ACACAGTGTTCTTGAACTTCATGGCCGTGCAGGATG...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTTCTTCAGGATGTTCTTaGCGGGGATCCGACCATCCT +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPSSGCS*RGSDHP
Trigger: AGGATGGTCGGATCCCCGTCAAGAACATCCTGAAGA...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGCCGCTTCTTGTCTGCTaGGAACATCTTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: LSRGREETLLARGCGCHRPLLVC*EHLQDV
Trigger: AACATCCTGAAGATGTTCTCAGCAGACAAGAAGCGG...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGCCGCTTCTTGTCTGCTaGGAACATCTTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSPLLVC*EHLQDV
Trigger: AACATCCTGAAGATGTTCTCAGCAGACAAGAAGCGG...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGGGTACAGCACTTCGTTaGGTCTCGGGTCGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRGTALR*VSGRVA
Trigger: AGCAACGCGACCCGAGACTCAACGAAGTGCTGTACC...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTATGTCCAGAGGCTCGATaGGTAGCGCGTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLCPEAR*VARLQR
Trigger: TCTTTGGAGACGCGCTACTCATCGAGCCTCTGGACA...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGGGACAGGAACTGCCCTaGGATCACCTTGACCCGCAA +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKGQELP*DHLDPQ
Trigger: TTGCGGGTCAAGGTGATCTCAGGGCAGTTCCTGTCC...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGAGGATGCTGGCGATaGGATCATCACGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRRGCWR*DHHAAL
Trigger: CAGGGCAGCGTGATGATCTCATCGCCAGCATCCTCT...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGGTGGGGGCCACCTCTaGGAGGATGCTGGCGATGAG +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPGGGHL*EDAGDE
Trigger: CTCATCGCCAGCATCCTCTCAGAGGTGGCCCCCACC...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp GCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGTGACTGCCTTCCGCTaGTGCTTCTTGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASHRRSEEVWGHCIDPEGVTAFR*CFLRSS
Trigger: GGAGCTGCGCAAGAAGCATCAGCGGAAGGCAGTCAC...TCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGACCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTAT +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARPSWFT*SFSFVY
Trigger: ATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGG...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGTACTCAGCCATCTTTaGCTGTTGCTTTGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LQVSSQLSRGREETLLARVLSHL*LLLCRV
Trigger: GACTCGGCAAAGCAACAGGCAAAGATGGCTGAGTAC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCTGGCATTCACCTCGCTaGTGGCTGTGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RRSEEVWGHCIDPEGGGPWHSPR*WLCPHL
Trigger: CAGATGAGGGCACAGCCAGCAGCGAGGTGAATGCCA...GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGGCTCTTGGTCAGTTaGTCCATGGCCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRGLLVS*SMALVS
Trigger: GGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGGGGCTCTTGGTCAGTTaGTCCATGGCCTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKGLLVS*SMALVS
Trigger: GGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCC...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGACTGTCGGACAGGAACTaGCCTGAGATCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGLSDRN*PEITLT
Trigger: GGTCAAGGTGATCTCAGGGCAGTTCCTGTCCGACAG...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp ATACTCAATTGGCAGGAGATAAGCCCAGATAAGAGGCCGCCTTCCCCTGGAGGACGCAGGTCTCGCTCTTaGCGGCTCCGGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: ILNWQEISPDKRPPSPGGRRSRS*RLRSLT
Trigger: GGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCG...TCCTCCAGGGGAAGGCGGCCTCTTATCTGGGCTTATCTCCTGCCAATTGAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGCTCCTGATACCGCTTTaGCTCGTCCTCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRLLIPL*LVLPLL
Trigger: AAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAG...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGCTCCTGATACCGCTTTaGCTCGTCCTCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRLLIPL*LVLPLL
Trigger: AAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAG...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGAACTGAGTTGTGTTTaGATCAAGGACGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: PELQVSSQLSRGREETLLELSCV*IKDDLP
Trigger: AGGGAGGTCGTCCTTGATGCAAACACAACTCAGTTC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTTCCGCCTCCTTCTTATaGTTGTCCCTCATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPSASFL*LSLILA
Trigger: GGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGA...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCGGGTGCGTGACCGTTaGTGGCACAGGCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQRVRDR*WHRPPE
Trigger: CTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCG...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGCAGCCAGTTCAGAGCTaGGTGTTCTCCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRQPVQS*VFSSWL
Trigger: GAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTG...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGGGTCCAGGCCTGCCCTaGCTCCAGGTCAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGGPGLP*LQVRTS
Trigger: AGACGTCCTGACCTGGAGGCAGGGCAGGCCTGGACC...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGCCTCAGACCAGACCTTaGCTGTGTCATCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRPQTRP*LCHPAR
Trigger: CCGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGG...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAACTCCATGGGGCTCTTaGTCAGTTGCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLTPWGS*SVAPWP
Trigger: AGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATTCCACAAACTCCATaGGGCTCTTGGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: APSLQPALPGKGGDAASSIPQTP*GSWSVA
Trigger: AGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAAT...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTTTGAGCGCAACAAGCTaGCACCCTACGTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: REETLLARGCGCHREQSPLSATS*HPTFQK
Trigger: CTTCTGGAACGTAGGGTGCCAGCTTGTTGCGCTCAA...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGTGGGCAGCACCACCTTaGGGAAGTCGAAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRWAAPP*GSRRAL
Trigger: AAGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCA...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCATGTTCCAGCCTCCGCTaGGCCTCTGCGTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPCSSLR*ASASTW
Trigger: CCAGGTGGACGCAGAGGCCCAGCGGAGGCTGGAACA...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCTGCGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTCVFSS*LSESAP
Trigger: GGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCA...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCGGTAGGGCGAGGTCTTaGAGGCAGTCTCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTGRARS*RQSRQW
Trigger: CCATTGCCGAGACTGCCTTCAAGACCTCGCCCTACC...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTGGGGTAGATGCGGCTaGGCTGCTGCTTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNWGRCG*AAACCI
Trigger: AATACAACAAGCAGCAGCTCAGCCGCATCTACCCCA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTCGTCCCACACGGGGTTaGACGAGTTCCCCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VFEDLGTDLECVPQWTPARPTRG*TSSPER
Trigger: CCTCTCAGGGGAACTCGTTCAACCCCGTGTGGGACG...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGGGCTGCAATGCGAAGTaGAGCCAGCGTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQGCNAK*SQRGQH
Trigger: GTGCTGCCCACGCTGGCTTCACTTCGCATTGCAGCC...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTACAAGGACGACCTCCCTaGGCCGCTGCAGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLQGRPP*AAAEPV
Trigger: GACAGGCTCTGCAGCGGCTCAGGGAGGTCGTCCTTG...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACCTGCTCCCGGGTGCGTaGCCGTTGCTGGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDLLPGA*PLLAQA
Trigger: GGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAG...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGGCTTCGTGTATGCTTTaGGCAGGAAGGTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRASCML*AGRCSG
Trigger: CCCGGAACACCTTCCTGCGCAAAGCATACACGAAGC...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGTCTCGGGTCGCGTTaGTTCTGGTTGATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLSLGSR*FWLMKS
Trigger: GGACTTCATCAACCAGAAGCAACGCGACCCGAGACT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGCTTTGCCTGTTGCTTTaGCGAGTCCACATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMLCLLL*RVHMVL
Trigger: GAGAACCATGTGGACTCGGCAAAGCAACAGGCAAAG...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGCCATCTTTGCCTGTTaGTTTGCCGAGTCCACATGG +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLAIFAC*FAESTW
Trigger: CCATGTGGACTCGGCAAAGCAACAGGCAAAGATGGC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACCTGGGAGACCCCAGCTaGGGGGAGGAGGGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDLGDPS*GEEGSV
Trigger: CACCGAGCCCTCCTCCCCGCAGCTGGGGTCTCCCAG...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp ATACTCAATTGGCAGGAGATAAGCCCAGATAAGAGGCCGCCTTCCCCTGGAGGAACGCCCGCGTTGAGCTaGATCGCCACATCGAGGGTC +
Preference number: 4 (lower is better)
Translates to: ILNWQEISPDKRPPSPGGTPALS*IATSRV
Trigger: GACCCTCGATGTGGCGATGCAGCTCAACGCGGGCGT...TCCTCCAGGGGAAGGCGGCCTCTTATCTGGGCTTATCTCCTGCCAATTGAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGCCTCAAAGGCTGCAATaGGAAGTGAAGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRPQRLQ*EVKPAW
Trigger: CCACGCTGGCTTCACTTCGCATTGCAGCCTTTGAGG...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGTCTTGGCCTCCGAGATaGTGTTATGGCGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMSWPPR*CYGAFC
Trigger: ACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGA...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTCCGCCTCCTTCTTATaGTTGTCCCTCATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNSASFL*LSLILA
Trigger: GGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCACTGACTCAGTGATGTaGCGACGGTTAATCTCCGTC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPTDSVM*RRLISV
Trigger: GACGGAGATTAACCGTCGGCACATCACTGAGTCAGT...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp AGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCTCACCAGGTTCCGACTaGAGGTCTCCTCGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RRSEEVWGHCIDPEGGGPSPGSD*RSPRPI
Trigger: AATGGGACGAGGAGACCTCCAGTCGGAACCTGGTGA...GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAACAAGAAGAAGCCATTaGGGTCCACACGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLTRRSH*GPHAGS
Trigger: TGACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGGGTCGCGTTGCTTCTaGTTGATGAAGTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNGSRCF*LMKSMS
Trigger: GCTCATGGACTTCATCAACCAGAAGCAACGCGACCC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGGGTCGCGTTGCTTCTaGTTGATGAAGTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: VGSLPLFAGLEAWDRSRLGSRCF*LMKSMS
Trigger: GCTCATGGACTTCATCAACCAGAAGCAACGCGACCC...CAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGGAAGTAGGCACTCAGTaGCTGGGTCATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKEVGTQ*LGHVRA
Trigger: AGCACGGACATGACCCAGCCACTGAGTGCCTACTTC...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGTTGCTCCATGGCCTTaGTCTCCACAAAGGACGACA +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNVAPWP*SPQRTT
Trigger: TGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAAC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGATGGTCAGTTGCTCCATaGCCTTGGTCTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGWSVAP*PWSPQR
Trigger: CCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCA...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGACTCCATGGGGCTCTTaGTCAGTTGCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRTPWGS*SVAPWP
Trigger: AGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGT...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGATTGAGCGCAACAAGCTaGCACCCTACGTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGLSATS*HPTFQK
Trigger: CTTCTGGAACGTAGGGTGCCAGCTTGTTGCGCTCAA...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGCCACATCGAGGGTCTaGAAGTTGAGCGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRATSRV*KLSATS
Trigger: GCTTGTTGCGCTCAACTTCCAGACCCTCGATGTGGC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp CTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGCAGGAAGGTGGGAGTTaGCTGCTGAGGAGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: LCHFSLVLRHGTGPGWLKQEGGS*LLRSLD
Trigger: ATCTAGGCTCCTCAGCAGCCAACTCCCACCTTCCTG...CTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGTCACCCAGAGACTTCTaGGGCTCCAGGCTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGSPRDF*GSRLGF
Trigger: GAAGCCCAGCCTGGAGCCTCAGAAGTCTCTGGGTGA...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTACAGGTTCGATGTAGTTaGCAAGCGTGGACATCTCCT +
Preference number: 4 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLQVRCS*QAWTSP
Trigger: AGGAGATGTCCACGCTTGTCAACTACATCGAACCTG...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTGGGGTAGATGCGGCTaGGCTGCTGCTTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRWGRCG*AAACCI
Trigger: AATACAACAAGCAGCAGCTCAGCCGCATCTACCCCA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCAAAAACGCCCGCGTTaGGCTGCATCGCCACATCGA +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTQKRPR*AASPHR
Trigger: TCGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTG...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCCCTGAGATCACCTTaGCCCGCAAGGCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPALRSP*PARHWP
Trigger: TGGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGC...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCATCTCTTTCAGCCTCTTaGACTGAGTTGTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASLSAS*TELCLH
Trigger: ATGCAAACACAACTCAGTTCAAGAGGCTGAAAGAGA...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTACGCTCAGGGCAGAATTaGTCTGCTCCAGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLRSGQN*SAPGAA
Trigger: AGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCG...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCATGCGGCTGAGCTGCTaGTTGTTGTATTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPMRLSC*LLYSTN
Trigger: GTTTGTGGAATACAACAAGCAGCAGCTCAGCCGCAT...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGATCCATCAGGCTGACGTaGTTAATGGGGTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGSIRLT*LMGLIR
Trigger: CCTGATCAACCCCATTAAGCACGTCAGCCTGATGGA...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCTGACTGACTCAGTGATGTaGCGACGGTTAATCTCCGTC +
Preference number: 4 (lower is better)
Translates to: VGSLPLFAGLEAWDRSRLTDSVM*RRLISV
Trigger: GACGGAGATTAACCGTCGGCACATCACTGAGTCAGT...CAGCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGTGTTGCAGGACCTGCTaGTGCCCAGCCACAAGACGG +
Preference number: 4 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQCCRTC*CPATRR
Trigger: CCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACA...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCAGCTGTTGCAGGACCTaGTGCTGCCCAGCCACAAGA +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTSCCRT*CCPATR
Trigger: TCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACAGCT...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGGTGGGAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGCCCCATAGTAGTGCCTaGCGGTACATCTCCACCGAC +
Preference number: 4 (lower is better)
Translates to: RWELAAEEPRYGIHWSEQPHSSA*RYISTD
Trigger: GTCGGTGGAGATGTACCGCCAGGCACTACTATGGGG...CTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTGGTCAGTTGCTCCATaGCCTTGGTCTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRWSVAP*PWSPQR
Trigger: CCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGATTCCACAAACTCCATaGGGCTCTTGGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMIPQTP*GSWSVA
Trigger: AGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAAT...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CCA 90 bp GCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGCCACATCGAGGGTCTaGAAGTTGAGCGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: ASHRRSEEVWGHCIDPEGATSRV*KLSATS
Trigger: GCTTGTTGCGCTCAACTTCCAGACCCTCGATGTGGC...TCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGGTATCCGGAGCGGATaGCAGAGACAGGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPGIRSG*QRQAGS
Trigger: GGATCCTGCCTGTCTCTGCCATCCGCTCCGGATACC...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGATCATCACGCTGCCCTaGGCTGCTGAGGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQIITLP*AAEGGA
Trigger: AGCACCTCCCTCAGCAGCCCAGGGCAGCGTGATGAT...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTGGGACAGGTCCAGGCTaGCTGAAGACAGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: VFEDLGTDLECVPQWTPAGTGPG*LKTVHH
Trigger: GTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTGCTGGTCTTGAGGCATaGGACAGGTCCAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VFEDLGTDLECVPQWTPAAGLEA*DRSRLA
Trigger: AGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAGC...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAAGATACGGAATACACTaGAGTGAGCAGAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGRYGIH*SEQNWG
Trigger: CCCCCAGTTCTGCTCACTCCAGTGTATTCCGTATCT...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp ATACTCAATTGGCAGGAGATAAGCCCAGATAAGAGGCCGCCTTCCCCTGGAGGAAGAGGATGCTGGCGATaGGATCATCACGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ILNWQEISPDKRPPSPGGRGCWR*DHHAAL
Trigger: CAGGGCAGCGTGATGATCTCATCGCCAGCATCCTCT...TCCTCCAGGGGAAGGCGGCCTCTTATCTGGGCTTATCTCCTGCCAATTGAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTTGGCTGTGTCATCCTaGACGGCCATGAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRLAVSS*TAMKFK
Trigger: CTTGAACTTCATGGCCGTGCAGGATGACACAGCCAA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCGCTTCGTGTATGCTTTaGGCAGGAAGGTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTASCML*AGRCSG
Trigger: CCCGGAACACCTTCCTGCGCAAAGCATACACGAAGC...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGGCGTCAGGTATGGCTTaGCCTTGGCGCCTATCTCCA +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGASGMA*PWRLSP
Trigger: TGGAGATAGGCGCCAAGGGCAAGCCATACCTGACGC...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTGCTGGGTCATGTCCGTaGTCAGATCCAGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VFEDLGTDLECVPQWTPAAGSCP*SDPGLP
Trigger: TGGAAGCCCTGGATCTGAGCACGGACATGACCCAGC...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGCTTTGCCTGTTGCTTTaGCGAGTCCACATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRLCLLL*RVHMVL
Trigger: GAGAACCATGTGGACTCGGCAAAGCAACAGGCAAAG...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGTACTCAGCCATCTTTaGCTGTTGCTTTGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRVLSHL*LLLCRV
Trigger: GACTCGGCAAAGCAACAGGCAAAGATGGCTGAGTAC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGCCACCTCCACGTAGATaGCCACCTTCCTGTCGGACA +
Preference number: 4 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWPPPRR*PPSCRT
Trigger: TGTCCGACAGGAAGGTGGGCATCTACGTGGAGGTGG...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTCCATCAGGCTGACGTaGTTAATGGGGTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRSIRLT*LMGLIR
Trigger: CCTGATCAACCCCATTAAGCACGTCAGCCTGATGGA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCACTCCTGATACCGCTTTaGCTCGTCCTCCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPLLIPL*LVLPLL
Trigger: AAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAG...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAACCTCCCTGAGCCGCTaGAGAGCCTGTCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLTSLSR*RACLRC
Trigger: ACACCTGAGACAGGCTCTGCAGCGGCTCAGGGAGGT...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGAACTGAGTTGTGTTTaGATCAAGGACGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNELSCV*IKDDLP
Trigger: AGGGAGGTCGTCCTTGATGCAAACACAACTCAGTTC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp GCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGATCCGCCTCCTTCTTATaGTTGTCCCTCATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASHRRSEEVWGHCIDPEGSASFL*LSLILA
Trigger: GGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGA...TCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp ATACTCAATTGGCAGGAGATAAGCCCAGATAAGAGGCCGCCTTCCCCTGGAGGACCTCAGACCAGACCTTaGCTGTGTCATCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: ILNWQEISPDKRPPSPGGPQTRP*LCHPAR
Trigger: CCGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGG...TCCTCCAGGGGAAGGCGGCCTCTTATCTGGGCTTATCTCCTGCCAATTGAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGCGCTCCAGAAACTGCTaGTTGGGCTCATACTTTTCG +
Preference number: 4 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRRSRNC*LGSYFS
Trigger: CGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGCG...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGTCTGAGGCTCCAGGCTaGGCTTCTCAAGCCCTACCT +
Preference number: 4 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWSEAPG*ASQALP
Trigger: AGGTAGGGCTTGAGAAGCCCAGCCTGGAGCCTCAGA...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGCCCTCATCTGTAGTTaGCTTTTTGGGGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRALICS*LFGVCL
Trigger: CAGACAGACCCCAAAAAGCCAACTACAGATGAGGGC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp GCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGACATCCTGCACGGCCATaGAGTTCAAGAACACTGTGT +
Preference number: 4 (lower is better)
Translates to: ASHRRSEEVWGHCIDPEGHPARP*SSRTLC
Trigger: ACACAGTGTTCTTGAACTTCATGGCCGTGCAGGATG...TCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTTGTCCAGAGGCTCGATaGGTAGCGCGTCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VFEDLGTDLECVPQWTPACPEAR*VARLQR
Trigger: TCTTTGGAGACGCGCTACTCATCGAGCCTCTGGACA...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACAGGCTTCGGTGTAGATaGGCAGGGCCGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDRLRCR*AGPAGT
Trigger: TGTGCCTGCCGGCCCTGCTCATCTACACCGAAGCCT...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGCTGTTCTGGAACTCCTaGTACCGCTTTGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGLFWNS*YRFASS
Trigger: GGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAG...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAACGGATGGAGTTGACTaGCTCAGTGATGTGCCGACG +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPTDGVD*LSDVPT
Trigger: CGTCGGCACATCACTGAGTCAGTCAACTCCATCCGT...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAACTTTTCGCTGGTCTTaGGGCATGGGACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPTFRWS*GMGQVQ
Trigger: CTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGT...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTCTCGCTCCAGAAACTaGTGGTTGGGCTCATACTTT +
Preference number: 4 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRSRSRN*WLGSYF
Trigger: AAAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTCTCGCTCCAGAAACTaGTGGTTGGGCTCATACTTT +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRSRSRN*WLGSYF
Trigger: AAAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGATGCGGCTGAGCTGCTaGTTGTTGTATTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRMRLSC*LLYSTN
Trigger: GTTTGTGGAATACAACAAGCAGCAGCTCAGCCGCAT...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR GCA 90 bp AGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCGAACTGAGTTGTGTTTaGATCAAGGACGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: RRSEEVWGHCIDPEGGGPELSCV*IKDDLP
Trigger: AGGGAGGTCGTCCTTGATGCAAACACAACTCAGTTC...GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTGAAGTCTGGGGCCATTaGATTGACCCTGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VFEDLGTDLECVPQWTPAEVWGH*IDPEGG
Trigger: TCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTC...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGTGTCCACCTCCATGTTaGGGCCCGTCCAGTACAAGA +
Preference number: 4 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQCPPPC*GPSSTR
Trigger: TCTTGTACTGGACGGGCCCCAACATGGAGGTGGACA...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAGCGCGTCTCCAAAGATaGAGCGGCAGTACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLARLQR*SGSTQP
Trigger: TGGCTGAGTACTGCCGCTCCATCTTTGGAGACGCGC...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCGTTGCTCCATGGCCTTaGTCTCCACAAAGGACGACA +
Preference number: 4 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTVAPWP*SPQRTT
Trigger: TGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAAC...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACCCAGCTGCCCCGCAGTaGGATAGGTGTTATGCGAGG +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDPAAPQ*DRCYAR
Trigger: CCTCGCATAACACCTATCTCACTGCGGGGCAGCTGG...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGTGGGGTAGATGCGGCTaGGCTGCTGCTTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGWGRCG*AAACCI
Trigger: AATACAACAAGCAGCAGCTCAGCCGCATCTACCCCA...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTCTCTTTCAGCCTCTTaGACTGAGTTGTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LARGCGCHREQSPDQGPNSLSAS*TELCLH
Trigger: ATGCAAACACAACTCAGTTCAAGAGGCTGAAAGAGA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR TCA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGATCTCTTTCAGCCTCTTaGACTGAGTTGTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGSLSAS*TELCLH
Trigger: ATGCAAACACAACTCAGTTCAAGAGGCTGAAAGAGA...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp AGGTGGGAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGCCCCATCTGTTTGCCTaGGGCTGCAGCAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: RWELAAEEPRYGIHWSEQPHLFA*GCSKNK
Trigger: TTTGTTTTTGCTGCAGCCTCAGGCAAACAGATGGGG...CTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGATGAAGTCCATGAGCTaGTCCAGCGTCAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQMKSMS*SSVRYG
Trigger: GCCATACCTGACGCTGGAGCAGCTCATGGACTTCAT...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAAGCTCCAGCAGGCTCTaGACCTGTCTGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLSSSRL*TCLFWN
Trigger: GTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAGCT...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAGCACTGTGGGCTCTCTaGCACTTTTCGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLALWAL*HFSLVL
Trigger: CAAGACCAGCGAAAAGTGGCAGAGAGCCCACAGTGC...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAACTCCATGGGGCTCTTaGTCAGTTGCTCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLTPWGS*SVAPWP
Trigger: AGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGT...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp ATACTCAATTGGCAGGAGATAAGCCCAGATAAGAGGCCGCCTTCCCCTGGAGGAACCTGGGAACTGACTTaGAGTGTGTCCCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ILNWQEISPDKRPPSPGGTWELT*SVSLSG
Trigger: TCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGT...TCCTCCAGGGGAAGGCGGCCTCTTATCTGGGCTTATCTCCTGCCAATTGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
3UTR CAA 72 bp GACATTCAGCTGGTATTTGAGGACCTGGGAACTGACTaGGAGTGTGTCCCTCAGTGGACACCAGCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: DIQLVFEDLGTD*ECVPQWTPARV
Trigger: GACTCTAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACTTGACCAGAGCCTTGTaGCCTCGGAGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDLTRAL*PRSSSS
Trigger: GCTGGATGAGCTCCGAGGTCACAAGGCTCTGGTCAA...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp ATACTCAATTGGCAGGAGATAAGCCCAGATAAGAGGCCGCCTTCCCCTGGAGGACTTTGCCTGTTGCTTTaGCGAGTCCACATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: ILNWQEISPDKRPPSPGGLCLLL*RVHMVL
Trigger: GAGAACCATGTGGACTCGGCAAAGCAACAGGCAAAG...TCCTCCAGGGGAAGGCGGCCTCTTATCTGGGCTTATCTCCTGCCAATTGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACGCGGGTGAGGGTGACTaGCTTCCGCTGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDAGEGD*LPLMLL
Trigger: AAGAAGCATCAGCGGAAGGCAGTCACCCTCACCCGC...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACGGGATCCGACCATCCTaGTTCACCTGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDGIRPS*FTCSFS
Trigger: GCTGAAGCTGCAGGTGAACCAGGATGGTCGGATCCC...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGGCCCTCATCTGTAGTTaGCTTTTTGGGGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGALICS*LFGVCL
Trigger: CAGACAGACCCCAAAAAGCCAACTACAGATGAGGGC...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGAGAAGTGAGGAAGTCTaGGGCCATTGCATTGACCCT +
Preference number: 4 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGRSEEV*GHCIDP
Trigger: AGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCT...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTACCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTAT +
Preference number: 4 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLPSWFT*SFSFVY
Trigger: ATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGG...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR GCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGATGCGGCTGAGCTGCTaGTTGTTGTATTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWMRLSC*LLYSTN
Trigger: GTTTGTGGAATACAACAAGCAGCAGCTCAGCCGCAT...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGTGGTATTTGAGGACCTaGGAACTGACTTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWWYLRT*ELTWSV
Trigger: CACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR TCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACCCGCTTCTTGTCTGCTaGGAACATCTTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDPLLVC*EHLQDV
Trigger: AACATCCTGAAGATGTTCTCAGCAGACAAGAAGCGG...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CCA 90 bp TGTCACACCCAGAAGTTAGACATTCAGCTGGTATTTGAGGACCTGGGAACTGACAAGAAGATACTCAATTaGCAGGAGATAAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CHTQKLDIQLVFEDLGTDKKILN*QEISPD
Trigger: ATCTGGGCTTATCTCCTGCCAATTGAGTATCTTCTT...GTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGTCTAACTTCTGGGTGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS GCA 90 bp TTACTCCCGCGCCGCAGGGTCTCCACCACGGTGGGCGGCTCCAACTaGAGCGCGTGGACGCCGGGCTGGGCGCCCGCCATGGCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: LLPRRRVSTTVGGSN*SAWTPGWAPAMARP
Trigger: TGGCCGGGCCATGGCGGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCACCGTGGTGGAGACCCTGCGGCGCGGGAGTAA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 90 bp CTCTCCGAGTCAGCGCCCGACAGGTGCCCGCTGCTCCCGGGTGCGTaGCCGTTGCTGGCACAGGCCACCAGAGGCCCGTCCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LSESAPDRCPLLPGA*PLLAQATRGPSPSP
Trigger: GGGGCTGGGGGACGGGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp AGTCAGCGCCCGACAGGTGCCCGCTGCTCCCGGGTGCGTGACCGTTaGTGGCACAGGCCACCAGAGGCCCGTCCCCCAGCCCCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: SQRPTGARCSRVRDR*WHRPPEARPPAPPA
Trigger: TGCCGGAGGGGCTGGGGGACGGGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp CAGCGCCCGACAGGTGCCCGCTGCTCCCGGGTGCGTGACCGTTGCTaGCACAGGCCACCAGAGGCCCGTCCCCCAGCCCCTCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: QRPTGARCSRVRDRC*HRPPEARPPAPPAS
Trigger: AGATGCCGGAGGGGCTGGGGGACGGGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp GAGGGCTCGGTGGCCGCGGAGCTCTCGCTCAGGGCAGAATTGCTCTaGTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTGGGCCACCTGCG +
Preference number: 5 (lower is better)
Translates to: EGSVAAELSLRAELL*SRGRLRPALSGPPA
Trigger: CGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp GGGAGGAGGGCTCGGTGGCCGCGGAGCTCTCGCTCAGGGCAGAATTaGTCTGCTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: GRRARWPRSSRSGQN*SAPGAACARRCLGH
Trigger: GTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGCCCTCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp CTGGCTCTCCGAGTCAGCGCCCGACAGGTGCCCGCTGCTCCCGGGTaGGTGACCGTTGCTGGCACAGGCCACCAGAGGCCCGTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LALRVSARQVPAAPG*VTVAGTGHQRPVPQ
Trigger: CTGGGGGACGGGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp CGGAGCTCTCGCTCAGGGCAGAATTGCTCTGCTCCAGGGGCCGCTTaGGCCCGGCGCTGTCTGGGCCACCTGCGCTGGGTCGGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: RSSRSGQNCSAPGAA*ARRCLGHLRWVGAA
Trigger: AGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCTGCTCCAGGGGCCGCTaGCGCCCGGCGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPCSRGR*RPALSG
Trigger: CCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCA...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS GCA 90 bp GCTCTGCTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTGGGCCACCTaGGCTGGGTCGGTGCCGCTTCTTGTTCTTCACCAGGATACGGCC +
Preference number: 5 (lower is better)
Translates to: ALLQGPLAPGAVWAT*AGSVPLLVLHQDTA
Trigger: GGCCGTATCCTGGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp TGTTCTCCTCCTGGCTCTCCGAGTCAGCGCCCGACAGGTGCCCGCTaGTCCCGGGTGCGTGACCGTTGCTGGCACAGGCCACCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: CSPPGSPSQRPTGAR*SRVRDRCWHRPPEA
Trigger: GGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAGGAGGAGAACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp CGCCCGCCCTGGCCCTGTGGCCACCTCGCTCAGCCAGTTCAGAGCTaGGTGTTCTCCTCCTGGCTCTCCGAGTCAGCGCCCGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: RPPWPCGHLAQPVQS*VFSSWLSESAPDRC
Trigger: GCACCTGTCGGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTGAGCGAGGTGGCCACAGGGCCAGGGCGGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS TCA 90 bp GCCAGGCCATCCAGCAGGCGGCGGGTGAGGGTGACTGCCTTCCGCTaGTGCTTCTTGCGCAGCTCCCGCAGGTCTCGCTCTTGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: ARPSSRRRVRVTAFR*CFLRSSRRSRSCRL
Trigger: GAGCCGGCAAGAGCGAGACCTGCGGGAGCTGCGCAAGAAGCATCAGCGGAAGGCAGTCACCCTCACCCGCCGCCTGCTGGATGGCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp GCTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTGGGCCACCTGCGCTaGGTCGGTGCCGCTTCTTGTTCTTCACCAGGATACGGCCCATCA +
Preference number: 5 (lower is better)
Translates to: APGAACARRCLGHLR*VGAASCSSPGYGPS
Trigger: TGATGGGCCGTATCCTGGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGTGCTCCAGGGGCCGCTaGCGCCCGGCGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMCSRGR*RPALSG
Trigger: CCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCA...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGAGGCACAGCGGTTGGTaGGCCTCGTTCCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWRHSGW*ASFRRQ
Trigger: CTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCCT...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS TCA 90 bp CGCAGGTCTCGCTCTTGCCGGCTCCGGAGCTTGACCAGAGCCTTGTaGCCTCGGAGCTCATCCAGCGGGGTGGGGGCCACCTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: RRSRSCRLRSLTRAL*PRSSSSGVGATSER
Trigger: CCTCTCAGAGGTGGCCCCCACCCCGCTGGATGAGCTCCGAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 90 bp TCTTGCGCAGCTCCCGCAGGTCTCGCTCTTGCCGGCTCCGGAGCTTaGCCAGAGCCTTGTGACCTCGGAGCTCATCCAGCGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SCAAPAGLALAGSGA*PEPCDLGAHPAGWG
Trigger: CCCCCACCCCGCTGGATGAGCTCCGAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGGGAGCTGCGCAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp GGCAGAATTGCTCTGCTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTaGGCCACCTGCGCTGGGTCGGTGCCGCTTCTTGTTCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: GRIALLQGPLAPGAV*ATCAGSVPLLVLHQ
Trigger: CTGGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp TGTGGCCACCTCGCTCAGCCAGTTCAGAGCTGCGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCCCGACAGGTGCCCGCTGCTCCCGGGT +
Preference number: 5 (lower is better)
Translates to: CGHLAQPVQSCVFSS*LSESAPDRCPLLPG
Trigger: ACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTGAGCGAGGTGGCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTATGCTCCAGGGGCCGCTaGCGCCCGGCGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLCSRGR*RPALSG
Trigger: CCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCA...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGTACCCGCTGCGCCCGTaGTACTCAAAAACGCCCGCG +
Preference number: 5 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWYPLRP*YSKTPA
Trigger: CGCGGGCGTTTTTGAGTACAACGGGCGCAGCGGGTA...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGAAGGGGTCGAAGGACTaGTCCGGCCGCCGCATGAAC +
Preference number: 5 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWKGSKD*SGRRMN
Trigger: GTTCATGCGGCGGCCGGACAAGTCCTTCGACCCCTT...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTACGGCAGGCACAGCGGTaGGTTGGCCTCGTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: PELQVSSQLSRGREETLLRQAQR*VGLVPQ
Trigger: CTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCG...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGTCCTGGCACGTCTCTaGGCCAGCCTGAGCCTCACT +
Preference number: 5 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFVLARL*ASLSLT
Trigger: AGTGAGGCTCAGGCTGGCCAAGAGACGTGCCAGGAC...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCCGCAGGTCTCGCTCTaGCCGGCTCCGGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: SRGREETLLARGCGCHREPQVSL*PAPELD
Trigger: GTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGG...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCCGGATCTTGGGGTCCTaGGGCAGGCGGGCGTACCGG +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPRILGS*GRRAYR
Trigger: CCGGTACGCCCGCCTGCCCAAGGACCCCAAGATCCG...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CAA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGGGTACAGCACTTCGTaGAGTCTCGGGTCGCGTTGC +
Preference number: 5 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFGYSTS*SLGSRC
Trigger: GCAACGCGACCCGAGACTCAACGAAGTGCTGTACCC...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGGGGGCTCTTGGTCAGTaGCTCCATGGCCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWGALGQ*LHGLGL
Trigger: GAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCC...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGTCCGGGTGCGGTACTaGCGCCGCGTATCAACAGGG +
Preference number: 5 (lower is better)
Translates to: PELQVSSQLSRGREETLLVRVRY*RRVSTG
Trigger: CCCTGTTGATACGCGGCGCAAGTACCGCACCCGGAC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAGTCCGGGTGCGGTACTaGCGCCGCGTATCAACAGGG +
Preference number: 5 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAVRVRY*RRVSTG
Trigger: CCCTGTTGATACGCGGCGCAAGTACCGCACCCGGAC...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAGGCACAGCGGTTGGTaGGCCTCGTTCCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PGKGGDAASSRVWVSQGARHSGW*ASFRRQ
Trigger: CTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCCT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAAGCTGGGCCAGCAGCTaGGGCTCCTCTTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PELQVSSQLSRGREETLLSWASS*GSSSAS
Trigger: GCTGGCAGAAGAGGAGCCCAAGCTGCTGGCCCAGCT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS GCA 90 bp GCCAGCAGCTTGGGCTCCTCTTCTGCCAGCTGTTGCAGGACCTGCTaGTGCCCAGCCACAAGACGGTCATGCCGCTGCTTCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASSLGSSSASCCRTC*CPATRRSCRCFWAS
Trigger: GGAGGCCCAGAAGCAGCGGCATGACCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACAGCTGGCAGAAGAGGAGCCCAAGCTGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp TCTCCTCATCTCGCTCAGCCAGTTCAGAGCTGCGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCCCGACAGGTGCCCGCTGCTCCCGGGT +
Preference number: 5 (lower is better)
Translates to: SPHLAQPVQSCVFSS*LSESAPDRCPLLPG
Trigger: ACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTGAGCGAGATGAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGAACTTCCCGGATCTaGGGGTCCTTGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: APSLQPALPGKGGDAASSRTSRI*GSLGRR
Trigger: CCGCCTGCCCAAGGACCCCAAGATCCGGGAAGTTCT...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CAA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGGGGCCAGCGGGTACTaGTCCAGAGGCTCGATGAGT +
Preference number: 5 (lower is better)
Translates to: PELQVSSQLSRGREETLLGASGY*SRGSMS
Trigger: ACTCATCGAGCCTCTGGACAAGTACCCGCTGGCCCC...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGGGGGCCAGCGGGTACTaGTCCAGAGGCTCGATGAGT +
Preference number: 5 (lower is better)
Translates to: SRGREETLLARGCGCHREGASGY*SRGSMS
Trigger: ACTCATCGAGCCTCTGGACAAGTACCCGCTGGCCCC...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCGGGGCCAGCGGGTACTaGTCCAGAGGCTCGATGAGT +
Preference number: 5 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPGASGY*SRGSMS
Trigger: ACTCATCGAGCCTCTGGACAAGTACCCGCTGGCCCC...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATCGCTCAGGGCAGAATaGCTCTGCTCCAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LQVSSQLSRGREETLLARSLRAE*LCSRGR
Trigger: GCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGA...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCAACTCCATGGGGCTCTaGGTCAGTTGCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFNSMGL*VSCSMA
Trigger: GGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTT...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGTACCCGCTGCGCCCGTaGTACTCAAAAACGCCCGCG +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRYPLRP*YSKTPA
Trigger: CGCGGGCGTTTTTGAGTACAACGGGCGCAGCGGGTA...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGAAGGGGTCGAAGGACTaGTCCGGCCGCCGCATGAAC +
Preference number: 5 (lower is better)
Translates to: SRGREETLLARGCGCHREKGSKD*SGRRMN
Trigger: GTTCATGCGGCGGCCGGACAAGTCCTTCGACCCCTT...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGTGGGCAGCACCACCTaGGGGAAGTCGAAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRVGSTT*GKSKGS
Trigger: AGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCAC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCGTGGGCAGCACCACCTaGGGGAAGTCGAAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPVGSTT*GKSKGS
Trigger: AGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCAC...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTCGGCAGGCACAGCGGTaGGTTGGCCTCGTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: REETLLARGCGCHREQSPRQAQR*VGLVPQ
Trigger: CTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCG...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCTCAGGAAGGTGGGAGTaGGCTGCTGAGGAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: LRAQPRPGARTVGSLPLFSGRWE*AAEEPR
Trigger: TCTAGGCTCCTCAGCAGCCAACTCCCACCTTCCTGA...GAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp TGCGAGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGTACAAGAAGAAGCCATaGGGGTCCACACGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CEPSPALEPALWALCHFSYKKKP*GSTRRV
Trigger: GACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGTA...CGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCGGCCGCAGACACAGCTaGTTCAGGAACCGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPAGRRHS*FRNRSK
Trigger: CTTTGAGCGGTTCCTGAACAAGCTGTGTCTGCGGCC...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGTATGGCTTGCCCTaGGCGCCTATCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: APSLQPALPGKGGDAASSRYGLP*APISSR
Trigger: CCTGCTGGAGATAGGCGCCAAGGGCAAGCCATACCT...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAGCGTCAGGTATGGCTaGCCCTTGGCGCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASVRYG*PLAPIS
Trigger: GGAGATAGGCGCCAAGGGCAAGCCATACCTGACGCT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGGGGTACAGCACTTCGTaGAGTCTCGGGTCGCGTTGC +
Preference number: 5 (lower is better)
Translates to: APSLQPALPGKGGDAASSGYSTS*SLGSRC
Trigger: GCAACGCGACCCGAGACTCAACGAAGTGCTGTACCC...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGGGTACAGCACTTCGTaGAGTCTCGGGTCGCGTTGC +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRGYSTS*SLGSRC
Trigger: GCAACGCGACCCGAGACTCAACGAAGTGCTGTACCC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGAGGCACAGCGGTTGGTaGGCCTCGTTCCGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMRHSGW*ASFRRQ
Trigger: CTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCCT...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGTCCTGGCACGTCTCTaGGCCAGCCTGAGCCTCACT +
Preference number: 5 (lower is better)
Translates to: LQVSSQLSRGREETLLARVLARL*ASLSLT
Trigger: AGTGAGGCTCAGGCTGGCCAAGAGACGTGCCAGGAC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCCGCAGGTCTCGCTCTaGCCGGCTCCGGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: LARGCGCHREQSPDQGPNPQVSL*PAPELD
Trigger: GTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGG...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCGTCTCCTCGTCCCATTaGATGAACTTACTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPAVSSSH*MNLLPR
Trigger: GCGCGGGAGTAAGTTCATCAAATGGGACGAGGAGAC...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGTCCTCAGACCAGACCTaGGCTGTGTCATCCTGCACG +
Preference number: 5 (lower is better)
Translates to: SRGREETLLARGCGCHRESSDQT*AVSSCT
Trigger: CGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGGA...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGGTCGGTGCCGCTTCTaGTTCTTCACCAGGATACGG +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRGRCRF*FFTRIR
Trigger: CCGTATCCTGGTGAAGAACAAGAAGCGGCACCGACC...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGGGTCGGTGCCGCTTCTaGTTCTTCACCAGGATACGG +
Preference number: 5 (lower is better)
Translates to: APSLQPALPGKGGDAASSGRCRF*FFTRIR
Trigger: CCGTATCCTGGTGAAGAACAAGAAGCGGCACCGACC...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTCGCTCAGGGCAGAATaGCTCTGCTCCAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LARGCGCHREQSPDQGPNSLRAE*LCSRGR
Trigger: GCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGCGGCTGAGCTGCTGCTaGTTGTATTCCACAAACTCC +
Preference number: 5 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWRLSCC*LYSTNS
Trigger: GGAGTTTGTGGAATACAACAAGCAGCAGCTCAGCCG...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCTACCCGCTGCGCCCGTaGTACTCAAAAACGCCCGCG +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPYPLRP*YSKTPA
Trigger: CGCGGGCGTTTTTGAGTACAACGGGCGCAGCGGGTA...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAAGGGGTCGAAGGACTaGTCCGGCCGCCGCATGAAC +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPKGSKD*SGRRMN
Trigger: GTTCATGCGGCGGCCGGACAAGTCCTTCGACCCCTT...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGGTGGGCAGCACCACCTaGGGGAAGTCGAAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMVGSTT*GKSKGS
Trigger: AGAGCCCTTCGACTTCCCCAAGGTGGTGCTGCCCAC...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGCCGCAGGTCTCGCTCTaGCCGGCTCCGGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRPQVSL*PAPELD
Trigger: GTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGG...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS TCA 90 bp TCTGGTCTCGCTCCAGAAACTGCTGGTTGGGCTCATACTTTTCGATaGGCAGCCGGGCCTGGGAGGGCCGCAGGGGCGGGTACAGCACTT +
Preference number: 5 (lower is better)
Translates to: SGLAPETAGWAHTFR*AAGPGRAAGAGTAL
Trigger: AAGTGCTGTACCCGCCCCTGCGGCCCTCCCAGGCCCGGCTGCTCATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGACCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 90 bp AAGTCGAAGGGCTCTTCGTCCCACACGGGGTTGAACGAGTTCCCCTaGGAGGTCCGGGTGCGGTACTTGCGCCGCGTATCAACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: KSKGSSSHTGLNEFP*EVRVRYLRRVSTGR
Trigger: CCTCCCTGTTGATACGCGGCGCAAGTACCGCACCCGGACCTCTCAGGGGAACTCGTTCAACCCCGTGTGGGACGAAGAGCCCTTCGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 90 bp AGTCCTGGTGGTCGTCAGGAATGTAGTCCGAGGCTTCGGTGTAGATaGGCAGGGCCGGCAGGCACAGCGGTTGGTTGGCCTCGTTCCGCA +
Preference number: 5 (lower is better)
Translates to: SPGGRQECSPRLRCR*AGPAGTAVGWPRSA
Trigger: TGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCGGCCCTGCTCATCTACACCGAAGCCTCGGACTACATTCCTGACGACCACCAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000536243.1
ENST00000540288.5
CDS GCA 90 bp CAGCAGGCTCTGCACCTGTCTGTTCTGGAACTCCTGATACCGCTTTaGCTCGTCCTCCCCCTCCTTCGTGTCCTCCACATCAGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: QQALHLSVLELLIPL*LVLPLLRVLHISGP
Trigger: GGGGCCGCTGATGTGGAGGACACGAAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp AGAAACTGCTGGTTGGGCTCATACTTTTCGATGAGCAGCCGGGCCTaGGAGGGCCGCAGGGGCGGGTACAGCACTTCGTTGAGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: RNCWLGSYFSMSSRA*EGRRGGYSTSLSLG
Trigger: CCCGAGACTCAACGAAGTGCTGTACCCGCCCCTGCGGCCCTCCCAGGCCCGGCTGCTCATCGAAAAGTATGAGCCCAACCAGCAGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGTACAAGAAGAAGCCATaGGGGTCCACACGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRYKKKP*GSTRRV
Trigger: GACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGTA...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CAA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAAGAACTTCCCGGATCTaGGGGTCCTTGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGRTSRI*GSLGRR
Trigger: CCGCCTGCCCAAGGACCCCAAGATCCGGGAAGTTCT...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCTTCGTGTATGCTTaGCGCAGGAAGGTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPSFVYA*RRKVFR
Trigger: CCGGAACACCTTCCTGCGCAAAGCATACACGAAGCT...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAATCTCCAGCAGGATCTaGTCAATGTCCGGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PGKGGDAASSRVWVSQGAISSRI*SMSGRR
Trigger: TCTGCGGCCGGACATTGACAAGATCCTGCTGGAGAT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTAGGTATGGCTTGCCCTaGGCGCCTATCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: REETLLARGCGCHREQSPRYGLP*APISSR
Trigger: CCTGCTGGAGATAGGCGCCAAGGGCAAGCCATACCT...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTAGCGTCAGGTATGGCTaGCCCTTGGCGCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: REETLLARGCGCHREQSPSVRYG*PLAPIS
Trigger: GGAGATAGGCGCCAAGGGCAAGCCATACCTGACGCT...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCTCGCGTTGCTTCTGGTaGATGAAGTCCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPASRCFW*MKSMSC
Trigger: GCAGCTCATGGACTTCATCAACCAGAAGCAACGCGA...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CAGGAAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCGAGTCTCGGGTCGCGTaGCTTCTGGTTGATGAAGTC +
Preference number: 5 (lower is better)
Translates to: QEAGRGLEEVPSRPCCEPESRVA*LLVDEV
Trigger: GACTTCATCAACCAGAAGCAACGCGACCCGAGACTC...GGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGCCCAGCCCCGCCCTGGAGCCCGCACTGTGGGCTCTCTGCCACTTTTCGCTGGGACATCTCGAAGCATTaGTTCCTCTTTCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SPAPPWSPHCGLSATFRWDISKH*FLFRAA
Trigger: GGCTGCTCGAAAGAGGAACAAATGCTTCGAGATGTC...CCAGCGAAAAGTGGCAGAGAGCCCACAGTGCGGGCTCCAGGGCGGGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAAGTTGCTCCATGGCCTaGGTCTCCACAAAGGACGAC +
Preference number: 5 (lower is better)
Translates to: PELQVSSQLSRGREETLLSCSMA*VSTKDD
Trigger: GTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAGTTGCTCCATGGCCTaGGTCTCCACAAAGGACGAC +
Preference number: 5 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASCSMA*VSTKDD
Trigger: GTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGGGGGCTCTTGGTCAGTaGCTCCATGGCCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMGALGQ*LHGLGL
Trigger: GAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCC...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGATCAAAAACGCCCGCGTaGAGCTGCATCGCCACATCG +
Preference number: 5 (lower is better)
Translates to: LQVSSQLSRGREETLLARSKTPA*SCIATS
Trigger: CGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTGA...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGTGCCCTGAGATCACCTaGACCCGCAAGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMCPEIT*TRKALA
Trigger: GGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGCA...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGAGCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAAGCCGACGGATGGAGTaGACTGACTCAGTGATGTGC +
Preference number: 5 (lower is better)
Translates to: PELQVSSQLSRGREETLLSRRME*TDSVMC
Trigger: GCACATCACTGAGTCAGTCAACTCCATCCGTCGGCT...TAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGCTGGGCCAGCAGCTaGGGCTCCTCTTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRSWASS*GSSSAS
Trigger: GCTGGCAGAAGAGGAGCCCAAGCTGCTGGCCCAGCT...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS TCA 90 bp TCCCGCAGCTCCAGCAGGCTCTGCACCTGTCTGTTCTGGAACTCCTaGTACCGCTTTGCCTCGTCCTCCCCCTCCTTCGTGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: SRSSSRLCTCLFWNS*YRFASSSPSFVSST
Trigger: TGTGGAGGACACGAAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAGCTGCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCACGGATCTTGGGGTCCTaGGGCAGGCGGGCGTACCGG +
Preference number: 5 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPRILGS*GRRAYR
Trigger: CCGGTACGCCCGCCTGCCCAAGGACCCCAAGATCCG...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAAGCTTCGTGTATGCTTaGCGCAGGAAGGTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: LQVSSQLSRGREETLLARSFVYA*RRKVFR
Trigger: CCGGAACACCTTCCTGCGCAAAGCATACACGAAGCT...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGATCTTCAGGATGTTCTaGACGGGGATCCGACCATCC +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRIFRMF*TGIRPS
Trigger: GGATGGTCGGATCCCCGTCAAGAACATCCTGAAGAT...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCATGGACTCACTCCGGTaGAATTTGAGGCCACAGGAT +
Preference number: 5 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPAMDSLR*NLRPQD
Trigger: ATCCTGTGGCCTCAAATTCAACCGGAGTGAGTCCAT...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGGCCGCAGACACAGCTaGTTCAGGAACCGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPGRRHS*FRNRSK
Trigger: CTTTGAGCGGTTCCTGAACAAGCTGTGTCTGCGGCC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGTCGCGTTGCTTCTGGTaGATGAAGTCCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRSRCFW*MKSMSC
Trigger: GCAGCTCATGGACTTCATCAACCAGAAGCAACGCGA...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGAGTCTCGGGTCGCGTaGCTTCTGGTTGATGAAGTC +
Preference number: 5 (lower is better)
Translates to: LQVSSQLSRGREETLLARESRVA*LLVDEV
Trigger: GACTTCATCAACCAGAAGCAACGCGACCCGAGACTC...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAGCCATCTTTGCCTGTaGCTTTGCCGAGTCCACATG +
Preference number: 5 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASHLCL*LCRVHM
Trigger: CATGTGGACTCGGCAAAGCAACAGGCAAAGATGGCT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGAGGGTCCAGGCCTGCCTCTGTAGTTGGCTTTTaGGGGTCTGTCTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GTGPGWLKTVHHGGSRPASVVGF*GSVCSS
Trigger: GGAGGAACAGACAGACCCCAAAAAGCCAACTACAGA...GGCAGGCCTGGACCCTCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGGGGCTCTTGGTCAGTaGCTCCATGGCCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLGALGQ*LHGLGL
Trigger: GAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTAACTCCATGGGGCTCTaGGTCAGTTGCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: REETLLARGCGCHREQSPNSMGL*VSCSMA
Trigger: GGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTT...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGCGGCTGAGCTGCTGCTaGTTGTATTCCACAAACTCC +
Preference number: 5 (lower is better)
Translates to: APSLQPALPGKGGDAASSRLSCC*LYSTNS
Trigger: GGAGTTTGTGGAATACAACAAGCAGCAGCTCAGCCG...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTATTGACCCGCAAGGCATaGGCCACGATGCCATCCACG +
Preference number: 5 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLLTRKA*ATMPST
Trigger: CGTGGATGGCATCGTGGCCAATGCCTTGCGGGTCAA...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCGGCAGGCACAGCGGTaGGTTGGCCTCGTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTRQAQR*VGLVPQ
Trigger: CTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCG...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS CCA 90 bp TGTCCACCTCCATGTTGGGGCCCGTCCAGTACAAGAAGAAGCCATTaGGGTCCACACGCAGGGTCACCAGGTTCCGACTGGAGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: CPPPCWGPSSTRRSH*GPHAGSPGSDWRSP
Trigger: AGGAGACCTCCAGTCGGAACCTGGTGACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGTACTGGACGGGCCCCAACATGGAGGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000540288.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGTCTCCTCGTCCCATTaGATGAACTTACTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPVSSSH*MNLLPR
Trigger: GCGCGGGAGTAAGTTCATCAAATGGGACGAGGAGAC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGTGTCCACCTCCATGTaGGGGCCCGTCCAGTACAAG +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRVSTSM*GPVQYK
Trigger: CTTGTACTGGACGGGCCCCAACATGGAGGTGGACAC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279230.12
CDS-3UTR CAA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTCCTCAGACCAGACCTaGGCTGTGTCATCCTGCACG +
Preference number: 5 (lower is better)
Translates to: LARGCGCHREQSPDQGPNSSDQT*AVSSCT
Trigger: CGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGGA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGATCCTCAGACCAGACCTaGGCTGTGTCATCCTGCACG +
Preference number: 5 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGSSDQT*AVSSCT
Trigger: CGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGGA...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGAGCTTCGTGTATGCTTaGCGCAGGAAGGTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMSFVYA*RRKVFR
Trigger: CCGGAACACCTTCCTGCGCAAAGCATACACGAAGCT...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGATGGACTCACTCCGGTaGAATTTGAGGCCACAGGAT +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRMDSLR*NLRPQD
Trigger: ATCCTGTGGCCTCAAATTCAACCGGAGTGAGTCCAT...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACGGCCGCAGACACAGCTaGTTCAGGAACCGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: LARGCGCHREQSPDQGPNGRRHS*FRNRSK
Trigger: CTTTGAGCGGTTCCTGAACAAGCTGTGTCTGCGGCC...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGATCTCCAGCAGGATCTaGTCAATGTCCGGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMISSRI*SMSGRR
Trigger: TCTGCGGCCGGACATTGACAAGATCCTGCTGGAGAT...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAAGCCATCTTTGCCTGTaGCTTTGCCGAGTCCACATG +
Preference number: 5 (lower is better)
Translates to: LQVSSQLSRGREETLLARSHLCL*LCRVHM
Trigger: CATGTGGACTCGGCAAAGCAACAGGCAAAGATGGCT...TCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAGTACTCAGCCATCTTaGCCTGTTGCTTTGCCGAGT +
Preference number: 5 (lower is better)
Translates to: PGKGGDAASSRVWVSQGASTQPS*PVALPS
Trigger: ACTCGGCAAAGCAACAGGCAAAGATGGCTGAGTACT...TGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGTCTGTAGTTGGCTTTTaGGGGTCTGTCTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRSVVGF*GSVCSS
Trigger: GGAGGAACAGACAGACCCCAAAAAGCCAACTACAGA...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCCAAGTCTCCAGCCAGCTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGGCAGCCTCAAAGGACTaGAACTTGACAGGTTCGATG +
Preference number: 5 (lower is better)
Translates to: APSLQPALPGKGGDAASSAASKD*NLTGSM
Trigger: CATCGAACCTGTCAAGTTCAAGTCCTTTGAGGCTGC...CGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAGCTGGCTGGAGACTTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGGACATCTCGAAGCATTaGTTCCTCTTTCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SRGREETLLARGCGCHREDISKH*FLFRAA
Trigger: GGCTGCTCGAAAGAGGAACAAATGCTTCGAGATGTC...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAACTCCATGGGGCTCTaGGTCAGTTGCTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLNSMGL*VSCSMA
Trigger: GGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTT...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGATCAAAAACGCCCGCGTaGAGCTGCATCGCCACATCG +
Preference number: 5 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGSKTPA*SCIATS
Trigger: CGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTGA...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTTGACCCGCAAGGCATaGGCCACGATGCCATCCACG +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRLTRKA*ATMPST
Trigger: CGTGGATGGCATCGTGGCCAATGCCTTGCGGGTCAA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CACTGGAGTGAGCAGAACTGGGGGATAGGGCAGCGTCCCACAGAAGAAGTGAGGTTGACCCGCAAGGCATaGGCCACGATGCCATCCACG +
Preference number: 5 (lower is better)
Translates to: HWSEQNWGIGQRPTEEVRLTRKA*ATMPST
Trigger: CGTGGATGGCATCGTGGCCAATGCCTTGCGGGTCAA...CCTCACTTCTTCTGTGGGACGCTGCCCTATCCCCCAGTTCTGCTCACTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTGCCCTGAGATCACCTaGACCCGCAAGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRCPEIT*TRKALA
Trigger: GGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGCA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTCTCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGATGTTCATAGCCAGCTaGAATAGCTCCTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: LSRGREETLLARGCGCHRMFIAS*NSSSDQ
Trigger: CTGGTCTGAGGAGCTATTCAAGCTGGCTATGAACAT...CCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGTCACTCCGGTTGAATTaGAGGCCACAGGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMSLRLN*RPQDSS
Trigger: GCTGGAATCCTGTGGCCTCAAATTCAACCGGAGTGA...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGGAGGATGTCGCGTTGCTTCTGGTaGATGAAGTCCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DQGPNLRLRAGRRGPRRMSRCFW*MKSMSC
Trigger: GCAGCTCATGGACTTCATCAACCAGAAGCAACGCGA...CATCCTCCTGGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGAGTCTCGGGTCGCGTaGCTTCTGGTTGATGAAGTC +
Preference number: 5 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLESRVA*LLVDEV
Trigger: GACTTCATCAACCAGAAGCAACGCGACCCGAGACTC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp TCCCGGGGAAGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGTCCAGAAACTGCTGGTaGGGCTCATACTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: SRGREETLLARGCGCHRESRNCW*GSYFSM
Trigger: CATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGA...CTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCTTCCCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGTCGCTCAGGGCAGAATaGCTCTGCTCCAGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGSLRAE*LCSRGR
Trigger: GCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGA...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTCAAAAACGCCCGCGTaGAGCTGCATCGCCACATCG +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRSKTPA*SCIATS
Trigger: CGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTGA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGGTCCGGGTGCGGTACTaGCGCCGCGTATCAACAGGG +
Preference number: 5 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQVRVRY*RRVSTG
Trigger: CCCTGTTGATACGCGGCGCAAGTACCGCACCCGGAC...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCTGCTTGTCCCTCATCTaGGCCTCCGAGATGCTGTTA +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPCLSLI*ASEMLL
Trigger: TAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCA...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGAGCTGGGCCAGCAGCTaGGGCTCCTCTTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQSWASS*GSSSAS
Trigger: GCTGGCAGAAGAGGAGCCCAAGCTGCTGGCCCAGCT...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAAAGCATTAGTGTCATaGCCTCCTGCCCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPKALVS*PPALHP
Trigger: TGGGTGGAGGGCAGGAGGCAATGACACTAATGCTTT...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AAGCTGGGAGAGGCCTTGAAGAGGTGCCAAGCCGACCCTGCTGCGAGCCCAGCCACATTCAGCTGGTATTaGAGGACCTGGGAACTGACT +
Preference number: 5 (lower is better)
Translates to: KLGEALKRCQADPAASPATFSWY*RTWELT
Trigger: AGTCAGTTCCCAGGTCCTCAAATACCAGCTGAATGT...GGCTGGGCTCGCAGCAGGGTCGGCTTGGCACCTCTTCAAGGCCTCTCCCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS CCA 90 bp ATCCTGCACGGCCATGAAGTTCAAGAACACTGTGTTCACTGGGTCTaGCCCAGACACCACCGTCATCAGCTTCTCCTCCAGCCGGGCATC +
Preference number: 5 (lower is better)
Translates to: ILHGHEVQEHCVHWV*PRHHRHQLLLQPGI
Trigger: GATGCCCGGCTGGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCCGTGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000540288.5
CDS CCA 90 bp AGGGGCGGGTACAGCACTTCGTTGAGTCTCGGGTCGCGTTGCTTCTaGTTGATGAAGTCCATGAGCTGCTCCAGCGTCAGGTATGGCTTG +
Preference number: 5 (lower is better)
Translates to: RGGYSTSLSLGSRCF*LMKSMSCSSVRYGL
Trigger: CAAGCCATACCTGACGCTGGAGCAGCTCATGGACTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCTGTACCCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp CTGTGGGCTCTCTGCCACTTTTCGCTGGTCTTGAGGCATGGGACAGGTCCAGGCATCTTCAGGATGTTCTaGACGGGGATCCGACCATCC +
Preference number: 5 (lower is better)
Translates to: LWALCHFSLVLRHGTGPGIFRMF*TGIRPS
Trigger: GGATGGTCGGATCCCCGTCAAGAACATCCTGAAGAT...GCCTGGACCTGTCCCATGCCTCAAGACCAGCGAAAAGTGGCAGAGAGCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CTGGTCTTGAGGCATGGGACAGGTCCAGGCTGGCTGAAGACAGTCCACCACGGATCACTCCGGTTGAATTaGAGGCCACAGGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: LVLRHGTGPGWLKTVHHGSLRLN*RPQDSS
Trigger: GCTGGAATCCTGTGGCCTCAAATTCAACCGGAGTGA...TCCGTGGTGGACTGTCTTCAGCCAGCCTGGACCTGTCCCATGCCTCAAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCAGCGTCAGGTATGGCTaGCCCTTGGCGCCTATCTCC +
Preference number: 5 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTSVRYG*PLAPIS
Trigger: GGAGATAGGCGCCAAGGGCAAGCCATACCTGACGCT...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCAGTACTCAGCCATCTTaGCCTGTTGCTTTGCCGAGT +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPSTQPS*PVALPS
Trigger: ACTCGGCAAAGCAACAGGCAAAGATGGCTGAGTACT...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGGCCCCGCAGCCTCAAAGGACTaGAACTTGACAGGTTCGATG +
Preference number: 5 (lower is better)
Translates to: QSPDQGPNLRLRAGRRGPAASKD*NLTGSM
Trigger: CATCGAACCTGTCAAGTTCAAGTCCTTTGAGGCTGC...GGGGCCCCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGAGGAGGGCCCAGTTGCTCCATGGCCTaGGTCTCCACAAAGGACGAC +
Preference number: 5 (lower is better)
Translates to: RRSEEVWGHCIDPEGGGPSCSMA*VSTKDD
Trigger: GTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACT...GGGCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGTGGGAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGTGCCCTGAGATCACCTaGACCCGCAAGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: RWELAAEEPRYGIHWSEQCPEIT*TRKALA
Trigger: GGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGCA...CTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGAGCCGACGGATGGAGTaGACTGACTCAGTGATGTGC +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRSRRME*TDSVMC
Trigger: GCACATCACTGAGTCAGTCAACTCCATCCGTCGGCT...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCCTGAGGGACCCCACCCCATCTGTTaGCCTGAGGCTGCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: ASHRRSEEVWGHCIDPEGPHPIC*PEAAAK
Trigger: TTTTGCTGCAGCCTCAGGCAAACAGATGGGGTGGGG...TCCCTCAGGGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTTCTGGGGCCATTGCATaGACCCTGAGGGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VFEDLGTDLECVPQWTPASGAIA*TLREEG
Trigger: GCCCTCCTCCCTCAGGGTCAATGCAATGGCCCCAGA...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS GCA 90 bp TGGGCCTCCTCCAGCCGACGGATGGAGTTGACTGACTCAGTGATGTaGCGACGGTTAATCTCCGTCAGTTCCGCCTCCTTCTTATGCTTG +
Preference number: 5 (lower is better)
Translates to: WASSSRRMELTDSVM*RRLISVSSASFLCL
Trigger: CAAGCATAAGAAGGAGGCGGAACTGACGGAGATTAACCGTCGGCACATCACTGAGTCAGTCAACTCCATCCGTCGGCTGGAGGAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp TGTGTCATCCTGCACGGCCATGAAGTTCAAGAACACTGTGTTCACTaGGTCTGGCCCAGACACCACCGTCATCAGCTTCTCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: CVILHGHEVQEHCVH*VWPRHHRHQLLLQP
Trigger: CGGCTGGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCCGTGCAGGATGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGGAGGAGACGCTGCTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTATGTTCATAGCCAGCTaGAATAGCTCCTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: REETLLARGCGCHREQSPMFIAS*NSSSDQ
Trigger: CTGGTCTGAGGAGCTATTCAAGCTGGCTATGAACAT...AGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAGCAGCGTCTCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGATCTTCAGGATGTTCTaGACGGGGATCCGACCATCC +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRIFRMF*TGIRPS
Trigger: GGATGGTCGGATCCCCGTCAAGAACATCCTGAAGAT...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGGTCTCCACCCGCTTCTaGTCTGCTGAGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRVSTRF*SAENIF
Trigger: GAAGATGTTCTCAGCAGACAAGAAGCGGGTGGAGAC...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGGTCTCCACCCGCTTCTaGTCTGCTGAGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRVSTRF*SAENIF
Trigger: GAAGATGTTCTCAGCAGACAAGAAGCGGGTGGAGAC...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTCACTCCGGTTGAATTaGAGGCCACAGGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRSLRLN*RPQDSS
Trigger: GCTGGAATCCTGTGGCCTCAAATTCAACCGGAGTGA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACATGGACTCACTCCGGTaGAATTTGAGGCCACAGGAT +
Preference number: 5 (lower is better)
Translates to: LARGCGCHREQSPDQGPNMDSLR*NLRPQD
Trigger: ATCCTGTGGCCTCAAATTCAACCGGAGTGAGTCCAT...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CTAGCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACTCTGTAGTTGGCTTTTaGGGGTCTGTCTGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LARGCGCHREQSPDQGPNSVVGF*GSVCSS
Trigger: GGAGGAACAGACAGACCCCAAAAAGCCAACTACAGA...GTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GCTCGAGGGTGTGGGTGTCACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAGACATCTCGAAGCATTaGTTCCTCTTTCGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ARGCGCHREQSPDQGPNLDISKH*FLFRAA
Trigger: GGCTGCTCGAAAGAGGAACAAATGCTTCGAGATGTC...TAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTGACACCCACACCCTCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGCGGCTGAGCTGCTGCTaGTTGTATTCCACAAACTCC +
Preference number: 5 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRRLSCC*LYSTNS
Trigger: GGAGTTTGTGGAATACAACAAGCAGCAGCTCAGCCG...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTGCTTGTCCCTCATCTaGGCCTCCGAGATGCTGTTA +
Preference number: 5 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRCLSLI*ASEMLL
Trigger: TAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGAAAGCATTAGTGTCATaGCCTCCTGCCCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRKALVS*PPALHP
Trigger: TGGGTGGAGGGCAGGAGGCAATGACACTAATGCTTT...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp AGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGAGGTTCTCCTCGTCCCATTaGATGAACTTACTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: REQSPDQGPNLRLRAGRRFSSSH*MNLLPR
Trigger: GCGCGGGAGTAAGTTCATCAAATGGGACGAGGAGAA...CCTCCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325234.5
CDS CCA 90 bp TGTGTCATCCTGCACGGCCATGAAGTTCAAGAACACTGTGTTCACTaGGTCTGGCCCAGACACCACCGTCATCAGCTTCTCCTCGTCCCA +
Preference number: 5 (lower is better)
Translates to: CVILHGHEVQEHCVH*VWPRHHRHQLLLVP
Trigger: TGGGACGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCCGTGCAGGATGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325234.5
CDS-3UTR CAA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAAGGTATGGCTTGCCCTaGGCGCCTATCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLRYGLP*APISSR
Trigger: CCTGCTGGAGATAGGCGCCAAGGGCAAGCCATACCT...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTGGTCGGTGCCGCTTCTaGTTCTTCACCAGGATACGG +
Preference number: 5 (lower is better)
Translates to: VFEDLGTDLECVPQWTPAGRCRF*FFTRIR
Trigger: CCGTATCCTGGTGAAGAACAAGAAGCGGCACCGACC...AGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp TGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGGACCTGGGAACTGACTaGGAGTGTGTCCCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: WYLRTWELTWSVSLSGHQDLGTD*ECVPQW
Trigger: CCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTC...CTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS TCA 90 bp ATAGCTCCTCAGACCAGACCTTGGCTGTGTCATCCTGCACGGCCATaGAGTTCAAGAACACTGTGTTCACTGGGTCTGGCCCAGACACCA +
Preference number: 5 (lower is better)
Translates to: IAPQTRPWLCHPARP*SSRTLCSLGLAQTP
Trigger: TGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCCGTGCAGGATGACACAGCCAAGGTCTGGTCTGAGGAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 90 bp AGCTTCGTGTATGCTTTGCGCAGGAAGGTGTTCCGGGAGGCGTTCTaGGCCAGGATGTTCATAGCCAGCTTGAATAGCTCCTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: SFVYALRRKVFREAF*ARMFIASLNSSSDQ
Trigger: CTGGTCTGAGGAGCTATTCAAGCTGGCTATGAACATCCTGGCTCAGAACGCCTCCCGGAACACCTTCCTGCGCAAAGCATACACGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp ATCTTCAGGATGTTCTTGACGGGGATCCGACCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTATGCTTTGCGCAGGAAGGTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: IFRMFLTGIRPSWFT*SFSFVYALRRKVFR
Trigger: CCGGAACACCTTCCTGCGCAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGTCGGATCCCCGTCAAGAACATCCTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp CTCCCTCTCGTTCATCTCTTTCAGCCTCTTGAACTGAGTTGTGTTTaGATCAAGGACGACCTCCCTGAGCCGCTGCAGAGCCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: LPLVHLFQPLELSCV*IKDDLPEPLQSLSQ
Trigger: CTGAGACAGGCTCTGCAGCGGCTCAGGGAGGTCGTCCTTGATGCAAACACAACTCAGTTCAAGAGGCTGAAAGAGATGAACGAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCGTCTCCACCCGCTTCTaGTCTGCTGAGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTVSTRF*SAENIF
Trigger: GAAGATGTTCTCAGCAGACAAGAAGCGGGTGGAGAC...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CTGGTATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAATCTCCAGCAGGATCTaGTCAATGTCCGGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: LVFEDLGTDLECVPQWTPISSRI*SMSGRR
Trigger: TCTGCGGCCGGACATTGACAAGATCCTGCTGGAGAT...TGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp CACAGGGAGCAAAGCCCTGACCAAGGCCCTAACCTAAGACTGAGGGCAGGAAGGTCCAGAAACTGCTGGTaGGGCTCATACTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: HREQSPDQGPNLRLRAGRSRNCW*GSYFSM
Trigger: CATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGA...CCTTCCTGCCCTCAGTCTTAGGTTAGGGCCTTGGTCAGGGCTTTGCTCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS-3UTR CAA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGAGCCGACGGATGGAGTaGACTGACTCAGTGATGTGC +
Preference number: 5 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWSRRME*TDSVMC
Trigger: GCACATCACTGAGTCAGTCAACTCCATCCGTCGGCT...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS GCA 90 bp GTTCCGCCTCCTTCTTATGCTTGTCCCTCATCTTGGCCTCCGAGATaGTGTTATGGCGCTTTCTGTCCAGGATCTTCTGCAGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VPPPSYACPSSWPPR*CYGAFCPGSSAAPS
Trigger: AGAAGGAGCTGCAGAAGATCCTGGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 90 bp GTGATGTGCCGACGGTTAATCTCCGTCAGTTCCGCCTCCTTCTTATaGTTGTCCCTCATCTTGGCCTCCGAGATGCTGTTATGGCGCTTT +
Preference number: 5 (lower is better)
Translates to: VMCRRLISVSSASFL*LSLILASEMLLWRF
Trigger: AAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAACTGACGGAGATTAACCGTCGGCACATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp GCTGAGAACATCTTCAGGATGTTCTTGACGGGGATCCGACCATCCTaGTTCACCTGCAGCTTCAGCTTCGTGTATGCTTTGCGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: AENIFRMFLTGIRPS*FTCSFSFVYALRRK
Trigger: CTTCCTGCGCAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGTCGGATCCCCGTCAAGAACATCCTGAAGATGTTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp ATCCTGCACGGCCATGAAGTTCAAGAACACTGTGTTCACTGGGTCTaGCCCAGACACCACCGTCATCAGCTTCTCCTCGTCCCATTTGAT +
Preference number: 5 (lower is better)
Translates to: ILHGHEVQEHCVHWV*PRHHRHQLLLVPFD
Trigger: ATCAAATGGGACGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCCGTGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325234.5
CDS-3UTR CAA 90 bp ATAGGGCAGCGTCCCACAGAAGAAGTGAGGAAGTCTGGGGCCATTGCATTGACCGCAGCCTCAAAGGACTaGAACTTGACAGGTTCGATG +
Preference number: 5 (lower is better)
Translates to: IGQRPTEEVRKSGAIALTAASKD*NLTGSM
Trigger: CATCGAACCTGTCAAGTTCAAGTCCTTTGAGGCTGC...GGTCAATGCAATGGCCCCAGACTTCCTCACTTCTTCTGTGGGACGCTGCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp GAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGTGCTTGTCCCTCATCTaGGCCTCCGAGATGCTGTTA +
Preference number: 5 (lower is better)
Translates to: ELAAEEPRYGIHWSEQNWCLSLI*ASEMLL
Trigger: TAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCA...CCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS CCA 90 bp TCCTTCTTATGCTTGTCCCTCATCTTGGCCTCCGAGATGCTGTTATaGCGCTTTCTGTCCAGGATCTTCTGCAGCTCCTTCTTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SFLCLSLILASEMLL*RFLSRIFCSSFFSL
Trigger: GAGGGAGAAGAAGGAGCTGCAGAAGATCCTGGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAAGCCATCTTTGCCTGTaGCTTTGCCGAGTCCACATG +
Preference number: 5 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLSHLCL*LCRVHM
Trigger: CATGTGGACTCGGCAAAGCAACAGGCAAAGATGGCT...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS GCA 90 bp TGCTGCTTGTTGTATTCCACAAACTCCATGGGGCTCTTGGTCAGTTaGTCCATGGCCTTGGTCTCCACAAAGGACGACATCTCGAAGCAT +
Preference number: 5 (lower is better)
Translates to: CCLLYSTNSMGLLVS*SMALVSTKDDISKH
Trigger: ATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAACAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp AGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAACTGGGTCCAGAAACTGCTGGTaGGGCTCATACTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: SWLLRSLDTEYTGVSRTGSRNCW*GSYFSM
Trigger: CATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGA...CCCAGTTCTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAAGTACTCAGCCATCTTaGCCTGTTGCTTTGCCGAGT +
Preference number: 5 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLSTQPS*PVALPS
Trigger: ACTCGGCAAAGCAACAGGCAAAGATGGCTGAGTACT...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS CCA 90 bp ATTCCACAAACTCCATGGGGCTCTTGGTCAGTTGCTCCATGGCCTTaGTCTCCACAAAGGACGACATCTCGAAGCATTTGTTCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: IPQTPWGSWSVAPWP*SPQRTTSRSICSSF
Trigger: GAAAGAGGAACAAATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 90 bp TGTTGTATTCCACAAACTCCATGGGGCTCTTGGTCAGTTGCTCCATaGCCTTGGTCTCCACAAAGGACGACATCTCGAAGCATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: CCIPQTPWGSWSVAP*PWSPQRTTSRSICS
Trigger: GGAACAAATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS-3UTR CAA 90 bp TATTTGAGGACCTGGGAACTGACTTGGAGTGTGTCCCTCAGTGGACACCAGCTAATGTTCATAGCCAGCTaGAATAGCTCCTCAGACCAG +
Preference number: 5 (lower is better)
Translates to: YLRTWELTWSVSLSGHQLMFIAS*NSSSDQ
Trigger: CTGGTCTGAGGAGCTATTCAAGCTGGCTATGAACAT...TAGCTGGTGTCCACTGAGGGACACACTCCAAGTCAGTTCCCAGGTCCTCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS-3UTR CAA 90 bp AGGTGGGAGTTGGCTGCTGAGGAGCCTAGATACGGAATACACTGGAGTGAGCAGAAAGAAGATACTCAATaGGCAGGAGATAAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: RWELAAEEPRYGIHWSEQKEDTQ*AGDKPR
Trigger: TCTGGGCTTATCTCCTGCCAATTGAGTATCTTCTTT...CTGCTCACTCCAGTGTATTCCGTATCTAGGCTCCTCAGCAGCCAACTCCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS GCA 72 bp CGCCGCAGGGTCTCCACCACGGTGGGCGGCTCCAACTaGAGCGCGTGGACGCCGGGCTGGGCGCCCGCCATG +
Preference number: 6 (lower is better)
Translates to: RRRVSTTVGGSN*SAWTPGWAPAM
Trigger: CATGGCGGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCACCGTGGTGGAGACCCTGCGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp GTCTCCACCACGGTGGGCGGCTCCAACTGCAGCGCGTaGACGCCGGGCTGGGCGCCCGCCATGGCCCGGCCA +
Preference number: 6 (lower is better)
Translates to: VSTTVGGSNCSA*TPGWAPAMARP
Trigger: TGGCCGGGCCATGGCGGGCGCCCAGCCCGGCGTCCACGCGCTGCAGTTGGAGCCGCCCACCGTGGTGGAGAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp TCAGCGCCCGACAGGTGCCCGCTGCTCCCGGGTGCGTaGCCGTTGCTGGCACAGGCCACCAGAGGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: SAPDRCPLLPGA*PLLAQATRGPS
Trigger: GGACGGGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp CGAGTCAGCGCCCGACAGGTGCCCGCTGCTCCCGGGTaGGTGACCGTTGCTGGCACAGGCCACCAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: RVSARQVPAAPG*VTVAGTGHQRP
Trigger: GGGCCTCTGGTGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp GGCTCGGTGGCCGCGGAGCTCTCGCTCAGGGCAGAATaGCTCTGCTCCAGGGGCCGCTTGCGCCCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: GSVAAELSLRAE*LCSRGRLRPAL
Trigger: CAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp GCGGAGCTCTCGCTCAGGGCAGAATTGCTCTGCTCCAGGGGCCGCTaGCGCCCGGCGCTGTCTGGGCCACCTGCGCTGGGTCGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: AELSLRAELLCSRGR*RPALSGPPALGRCR
Trigger: GCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp GGGGAGGAGGGCTCGGTGGCCGCGGAGCTCTCGCTCAGGGCAGAATaGCTCTGCTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: GEEGSVAAELSLRAE*LCSRGRLRPALSGP
Trigger: TGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGCCCTCCTCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp CGCTCAGGGCAGAATTGCTCTGCTCCAGGGGCCGCTTaGGCCCGGCGCTGTCTGGGCCACCTGCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RSGQNCSAPGAA*ARRCLGHLRWV
Trigger: GACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp GTGGCCGCGGAGCTCTCGCTCAGGGCAGAATTGCTCTaGTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: VAAELSLRAELL*SRGRLRPALSG
Trigger: CCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGCGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp GCTCGGTGGCCGCGGAGCTCTCGCTCAGGGCAGAATTaGTCTGCTCCAGGGGCCGCTTGCGCCCGGCGCTGT +
Preference number: 6 (lower is better)
Translates to: ARWPRSSRSGQN*SAPGAACARRC
Trigger: ACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp CCTGGCTCTCCGAGTCAGCGCCCGACAGGTGCCCGCTaGTCCCGGGTGCGTGACCGTTGCTGGCACAGGCCA +
Preference number: 6 (lower is better)
Translates to: PGSPSQRPTGAR*SRVRDRCWHRP
Trigger: TGGCCTGTGCCAGCAACGGTCACGCACCCGGGAGCAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp GCTCTGCTCCAGGGGCCGCTTGCGCCCGGCGCTGTCTaGGCCACCTGCGCTGGGTCGGTGCCGCTTCTTGTT +
Preference number: 6 (lower is better)
Translates to: ALLQGPLAPGAV*ATCAGSVPLLV
Trigger: AACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp CAGGGGCCGCTTGCGCCCGGCGCTGTCTGGGCCACCTaGGCTGGGTCGGTGCCGCTTCTTGTTCTTCACCAG +
Preference number: 6 (lower is better)
Translates to: QGPLAPGAVWAT*AGSVPLLVLHQ
Trigger: CTGGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp TCGCTCAGGGCAGAATTGCTCTGCTCCAGGGGCCGCTaGCGCCCGGCGCTGTCTGGGCCACCTGCGCTGGGT +
Preference number: 6 (lower is better)
Translates to: SLRAELLCSRGR*RPALSGPPALG
Trigger: ACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGCCCCTGGAGCAGAGCAATTCTGCCCTGAGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp CGCCCGGCGCTGTCTGGGCCACCTGCGCTGGGTCGGTGCCGCTTCTaGTTCTTCACCAGGATACGGCCCATCAGGTCCTGGGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RPALSGPPALGRCRF*FFTRIRPIRSWGLG
Trigger: GCCCAGCCCCCAGGACCTGATGGGCCGTATCCTGGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp CGCTCTTGCCGGCTCCGGAGCTTGACCAGAGCCTTGTaGCCTCGGAGCTCATCCAGCGGGGTGGGGGCCACC +
Preference number: 6 (lower is better)
Translates to: RSCRLRSLTRAL*PRSSSSGVGAT
Trigger: GGTGGCCCCCACCCCGCTGGATGAGCTCCGAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGCAAGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp AGCCAGGCCATCCAGCAGGCGGCGGGTGAGGGTGACTaGCTTCCGCTGATGCTTCTTGCGCAGCTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: SQAIQQAAGEGD*LPLMLLAQLPQ
Trigger: CTGCGGGAGCTGCGCAAGAAGCATCAGCGGAAGGCAGTCACCCTCACCCGCCGCCTGCTGGATGGCCTGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp GCCGCTTGCGCCCGGCGCTGTCTGGGCCACCTGCGCTaGGTCGGTGCCGCTTCTTGTTCTTCACCAGGATAC +
Preference number: 6 (lower is better)
Translates to: AACARRCLGHLR*VGAASCSSPGY
Trigger: GTATCCTGGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAGCGCCGGGCGCAAGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp GCTCCCGCAGGTCTCGCTCTTGCCGGCTCCGGAGCTTaGCCAGAGCCTTGTGACCTCGGAGCTCATCCAGCG +
Preference number: 6 (lower is better)
Translates to: APAGLALAGSGA*PEPCDLGAHPA
Trigger: CGCTGGATGAGCTCCGAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp TCCAGCAGGCGGCGGGTGAGGGTGACTGCCTTCCGCTaGTGCTTCTTGCGCAGCTCCCGCAGGTCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: SSRRRVRVTAFR*CFLRSSRRSRS
Trigger: AGAGCGAGACCTGCGGGAGCTGCGCAAGAAGCATCAGCGGAAGGCAGTCACCCTCACCCGCCGCCTGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp TGGCCCTGTGGCCACCTCGCTCAGCCAGTTCAGAGCTaGGTGTTCTCCTCCTGGCTCTCCGAGTCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: WPCGHLAQPVQS*VFSSWLSESAP
Trigger: GGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTGAGCGAGGTGGCCACAGGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000325234.5
CDS CCA 72 bp CTCGCTCAGCCAGTTCAGAGCTGCGTGTTCTCCTCCTaGCTCTCCGAGTCAGCGCCCGACAGGTGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: LAQPVQSCVFSS*LSESAPDRCPL
Trigger: CAGCGGGCACCTGTCGGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTGAGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp GTCCGAGGCTTCGGTGTAGATGAGCAGGGCCGGCAGGCACAGCGGTaGGTTGGCCTCGTTCCGCAGGCAGACGTAGTGGTATCCGGAGCG +
Preference number: 6 (lower is better)
Translates to: VRGFGVDEQGRQAQR*VGLVPQADVVVSGA
Trigger: CGCTCCGGATACCACTACGTCTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCGGCCCTGCTCATCTACACCGAAGCCTCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000536243.1
ENST00000540288.5
CDS TCA 72 bp GCTCCAGAAACTGCTGGTTGGGCTCATACTTTTCGATaGGCAGCCGGGCCTGGGAGGGCCGCAGGGGCGGGT +
Preference number: 6 (lower is better)
Translates to: APETAGWAHTFR*AAGPGRAAGAG
Trigger: ACCCGCCCCTGCGGCCCTCCCAGGCCCGGCTGCTCATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp ACCTGCTGCTGCCCAGCCACAAGACGGTCATGCCGCTaGTTCTGGGCCTCCTCCAGCCGACGGATGGAGTTG +
Preference number: 6 (lower is better)
Translates to: TCCCPATRRSCR*FWASSSRRMEL
Trigger: CAACTCCATCCGTCGGCTGGAGGAGGCCCAGAAGCAGCGGCATGACCGTCTTGTGGCTGGGCAGCAGCAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp AGCAGCCGGGCCTGGGAGGGCCGCAGGGGCGGGTACAGCACTTCGTaGAGTCTCGGGTCGCGTTGCTTCTGGTTGATGAAGTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: SSRAWEGRRGGYSTS*SLGSRCFWLMKSMS
Trigger: GCTCATGGACTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCTGTACCCGCCCCTGCGGCCCTCCCAGGCCCGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp TGCCTTCCGCTGATGCTTCTTGCGCAGCTCCCGCAGGTCTCGCTCTaGCCGGCTCCGGAGCTTGACCAGAGCCTTGTGACCTCGGAGCTC +
Preference number: 6 (lower is better)
Translates to: CLPLMLLAQLPQVSL*PAPELDQSLVTSEL
Trigger: GAGCTCCGAGGTCACAAGGCTCTGGTCAAGCTCCGGAGCCGGCAAGAGCGAGACCTGCGGGAGCTGCGCAAGAAGCATCAGCGGAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp GGCTCTTCGTCCCACACGGGGTTGAACGAGTTCCCCTaGGAGGTCCGGGTGCGGTACTTGCGCCGCGTATCA +
Preference number: 6 (lower is better)
Translates to: GSSSHTGLNEFP*EVRVRYLRRVS
Trigger: TGATACGCGGCGCAAGTACCGCACCCGGACCTCTCAGGGGAACTCGTTCAACCCCGTGTGGGACGAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp CTCTCCCCAATGAGGGCGGCCAGCTGCCGGGCCCTCTaGTCCATCAGGCTGACGTGCTTAATGGGGTTGATC +
Preference number: 6 (lower is better)
Translates to: LSPMRAASCRAL*SIRLTCLMGLI
Trigger: GATCAACCCCATTAAGCACGTCAGCCTGATGGACCAGAGGGCCCGGCAGCTGGCCGCCCTCATTGGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000536243.1
ENST00000540288.5
CDS CCA 72 bp TGCTGCCCAGCCACAAGACGGTCATGCCGCTGCTTCTaGGCCTCCTCCAGCCGACGGATGGAGTTGACTGAC +
Preference number: 6 (lower is better)
Translates to: CCPATRRSCRCF*ASSSRRMELTD
Trigger: GTCAGTCAACTCCATCCGTCGGCTGGAGGAGGCCCAGAAGCAGCGGCATGACCGTCTTGTGGCTGGGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp GCCTGGGAGGGCCGCAGGGGCGGGTACAGCACTTCGTaGAGTCTCGGGTCGCGTTGCTTCTGGTTGATGAAG +
Preference number: 6 (lower is better)
Translates to: AWEGRRGGYSTS*SLGSRCFWLMK
Trigger: CTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCTGTACCCGCCCCTGCGGCCCTCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp CTGTCTGGGCCACCTGCGCTGGGTCGGTGCCGCTTCTaGTTCTTCACCAGGATACGGCCCATCAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LSGPPALGRCRF*FFTRIRPIRSW
Trigger: CCAGGACCTGATGGGCCGTATCCTGGTGAAGAACAAGAAGCGGCACCGACCCAGCGCAGGTGGCCCAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp CCAGCAGGCTCTGCACCTGTCTGTTCTGGAACTCCTGATACCGCTTaGCCTCGTCCTCCCCCTCCTTCGTGTCCTCCACATCAGCGGCCC +
Preference number: 6 (lower is better)
Translates to: PAGSAPVCSGTPDTA*PRPPPPSCPPHQRP
Trigger: GGGCCGCTGATGTGGAGGACACGAAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp GGTCGTCAGGAATGTAGTCCGAGGCTTCGGTGTAGATaGGCAGGGCCGGCAGGCACAGCGGTTGGTTGGCCT +
Preference number: 6 (lower is better)
Translates to: GRQECSPRLRCR*AGPAGTAVGWP
Trigger: AGGCCAACCAACCGCTGTGCCTGCCGGCCCTGCTCATCTACACCGAAGCCTCGGACTACATTCCTGACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000536243.1
ENST00000540288.5
CDS GCA 72 bp TTGGGCTCCTCTTCTGCCAGCTGTTGCAGGACCTGCTaGTGCCCAGCCACAAGACGGTCATGCCGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LGSSSASCCRTC*CPATRRSCRCF
Trigger: GAAGCAGCGGCATGACCGTCTTGTGGCTGGGCAGCAGCAGGTCCTGCAACAGCTGGCAGAAGAGGAGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp CCTCAGTCTCCTCATCTCGCTCAGCCAGTTCAGAGCTaGGTGTTCTCCTCCTGGCTCTCCGAGTCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: PQSPHLAQPVQS*VFSSWLSESAP
Trigger: GGGCGCTGACTCGGAGAGCCAGGAGGAGAACACGCAGCTCTGAACTGGCTGAGCGAGATGAGGAGACTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540288.5
CDS CAA 72 bp TTCGGTGTAGATGAGCAGGGCCGGCAGGCACAGCGGTaGGTTGGCCTCGTTCCGCAGGCAGACGTAGTGGTA +
Preference number: 6 (lower is better)
Translates to: FGVDEQGRQAQR*VGLVPQADVVV
Trigger: TACCACTACGTCTGCCTGCGGAACGAGGCCAACCAACCGCTGTGCCTGCCGGCCCTGCTCATCTACACCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000536243.1
ENST00000540288.5
CDS CAA 90 bp GTGTCCACCTCCATGTTGGGGCCCGTCCAGTACAAGAAGAAGCCATaGGGGTCCACACGCAGGGTCACCAGGTTCCGACTGGAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: VSTSMLGPVQYKKKP*GSTRRVTRFRLEVS
Trigger: GGAGACCTCCAGTCGGAACCTGGTGACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGTACTGGACGGGCCCCAACATGGAGGTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000540288.5
CDS CCA 72 bp CCATGTTGGGGCCCGTCCAGTACAAGAAGAAGCCATTaGGGTCCACACGCAGGGTCACCAGGTTCCGACTGG +
Preference number: 6 (lower is better)
Translates to: PCWGPSSTRRSH*GPHAGSPGSDW
Trigger: CCAGTCGGAACCTGGTGACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGTACTGGACGGGCCCCAACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000540288.5
CDS CAA 72 bp ATGAACTCCGGCTTGAGCAGGTACCCGCTGCGCCCGTaGTACTCAAAAACGCCCGCGTTGAGCTGCATCGCC +
Preference number: 6 (lower is better)
Translates to: MNSGLSRYPLRP*YSKTPALSCIA
Trigger: GGCGATGCAGCTCAACGCGGGCGTTTTTGAGTACAACGGGCGCAGCGGGTACCTGCTCAAGCCGGAGTTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp TCCAGCAGGCTCTGCACCTGTCTGTTCTGGAACTCCTaGTACCGCTTTGCCTCGTCCTCCCCCTCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: SSRLCTCLFWNS*YRFASSSPSFV
Trigger: CACGAAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp TCCATGTTGGGGCCCGTCCAGTACAAGAAGAAGCCATaGGGGTCCACACGCAGGGTCACCAGGTTCCGACTG +
Preference number: 6 (lower is better)
Translates to: SMLGPVQYKKKP*GSTRRVTRFRL
Trigger: CAGTCGGAACCTGGTGACCCTGCGTGTGGACCCCAATGGCTTCTTCTTGTACTGGACGGGCCCCAACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000540288.5
CDS CAA 72 bp TACCCGCTGCGCCCGTTGTACTCAAAAACGCCCGCGTaGAGCTGCATCGCCACATCGAGGGTCTGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: YPLRPLYSKTPA*SCIATSRVWKL
Trigger: CAACTTCCAGACCCTCGATGTGGCGATGCAGCTCAACGCGGGCGTTTTTGAGTACAACGGGCGCAGCGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp CGCTGCTTCTGGGCCTCCTCCAGCCGACGGATGGAGTaGACTGACTCAGTGATGTGCCGACGGTTAATCTCC +
Preference number: 6 (lower is better)
Translates to: RCFWASSSRRME*TDSVMCRRLIS
Trigger: GGAGATTAACCGTCGGCACATCACTGAGTCAGTCAACTCCATCCGTCGGCTGGAGGAGGCCCAGAAGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp GGCGGGTACAGCACTTCGTTGAGTCTCGGGTCGCGTTGCTTCTGGTaGATGAAGTCCATGAGCTGCTCCAGCGTCAGGTATGGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: GGYSTSLSLGSRCFW*MKSMSCSSVRYGLP
Trigger: GGGCAAGCCATACCTGACGCTGGAGCAGCTCATGGACTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCTGTACCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp CTTCTGGGCCTCCTCCAGCCGACGGATGGAGTTGACTaGCTCAGTGATGTGCCGACGGTTAATCTCCGTCAG +
Preference number: 6 (lower is better)
Translates to: LLGLLQPTDGVD*LSDVPTVNLRQ
Trigger: CTGACGGAGATTAACCGTCGGCACATCACTGAGTCAGTCAACTCCATCCGTCGGCTGGAGGAGGCCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp GGCGGGTACAGCACTTCGTTGAGTCTCGGGTCGCGTTaGTTCTGGTTGATGAAGTCCATGAGCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GGYSTSLSLGSR*FWLMKSMSCSS
Trigger: GCTGGAGCAGCTCATGGACTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCTGTACCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp CCCTCCATGGACATCTGGTCTCGCTCCAGAAACTGCTaGTTGGGCTCATACTTTTCGATGAGCAGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: PSMDIWSRSRNC*LGSYFSMSSRA
Trigger: GGCCCGGCTGCTCATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGACCAGATGTCCATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp GGGCGGGTACAGCACTTCGTTGAGTCTCGGGTCGCGTaGCTTCTGGTTGATGAAGTCCATGAGCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: GRVQHFVESRVA*LLVDEVHELLQ
Trigger: CTGGAGCAGCTCATGGACTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCTGTACCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp TCCAGCCGACGGATGGAGTTGACTGACTCAGTGATGTaGCGACGGTTAATCTCCGTCAGTTCCGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSRRMELTDSVM*RRLISVSSASF
Trigger: GAAGGAGGCGGAACTGACGGAGATTAACCGTCGGCACATCACTGAGTCAGTCAACTCCATCCGTCGGCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp TATGGCTTGCCCTTGGCGCCTATCTCCAGCAGGATCTaGTCAATGTCCGGCCGCAGACACAGCTTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: YGLPLAPISSRI*SMSGRRHSLFR
Trigger: CCTGAACAAGCTGTGTCTGCGGCCGGACATTGACAAGATCCTGCTGGAGATAGGCGCCAAGGGCAAGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp TCCATGGACATCTGGTCTCGCTCCAGAAACTGCTGGTaGGGCTCATACTTTTCGATGAGCAGCCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SMDIWSRSRNCW*GSYFSMSSRAW
Trigger: CCAGGCCCGGCTGCTCATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGACCAGATGTCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp AGGAACTGCCCTGAGATCACCTTGACCCGCAAGGCATaGGCCACGATGCCATCCACGATGACCTCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: RNCPEITLTRKA*ATMPSTMTSVK
Trigger: CTTCACTGAGGTCATCGTGGATGGCATCGTGGCCAATGCCTTGCGGGTCAAGGTGATCTCAGGGCAGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp TCTGCACCTGTCTGTTCTGGAACTCCTGATACCGCTTaGCCTCGTCCTCCCCCTCCTTCGTGTCCTCCACAT +
Preference number: 6 (lower is better)
Translates to: SAPVCSGTPDTA*PRPPPPSCPPH
Trigger: ATGTGGAGGACACGAAGGAGGGGGAGGACGAGGCAAAGCGGTATCAGGAGTTCCAGAACAGACAGGTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS TCA 72 bp CAGACCAGACCTTGGCTGTGTCATCCTGCACGGCCATaGAGTTCAAGAACACTGTGTTCACTGGGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: QTRPWLCHPARP*SSRTLCSLGLA
Trigger: GGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCCGTGCAGGATGACACAGCCAAGGTCTGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp AAGCCCTCCATGGACATCTGGTCTCGCTCCAGAAACTaGTGGTTGGGCTCATACTTTTCGATGAGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: KPSMDIWSRSRN*WLGSYFSMSSR
Trigger: CCGGCTGCTCATCGAAAAGTATGAGCCCAACCAGCAGTTTCTGGAGCGAGACCAGATGTCCATGGAGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp GGCCATGAAGTTCAAGAACACTGTGTTCACTGGGTCTaGCCCAGACACCACCGTCATCAGCTTCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GHEVQEHCVHWV*PRHHRHQLLLQ
Trigger: CTGGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279230.12
ENST00000540288.5
CDS CCA 72 bp CTGCACGGCCATGAAGTTCAAGAACACTGTGTTCACTaGGTCTGGCCCAGACACCACCGTCATCAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: LHGHEVQEHCVH*VWPRHHRHQLL
Trigger: GAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCCGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp GTTGATGAAGTCCATGAGCTGCTCCAGCGTCAGGTATaGCTTGCCCTTGGCGCCTATCTCCAGCAGGATCTT +
Preference number: 6 (lower is better)
Translates to: VDEVHELLQRQV*LALGAYLQQDL
Trigger: AAGATCCTGCTGGAGATAGGCGCCAAGGGCAAGCCATACCTGACGCTGGAGCAGCTCATGGACTTCATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp TACAGCACTTCGTTGAGTCTCGGGTCGCGTTGCTTCTaGTTGATGAAGTCCATGAGCTGCTCCAGCGTCAGG +
Preference number: 6 (lower is better)
Translates to: YSTSLSLGSRCF*LMKSMSCSSVR
Trigger: CCTGACGCTGGAGCAGCTCATGGACTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp CCACAAACTCCATGGGGCTCTTGGTCAGTTGCTCCATaGCCTTGGTCTCCACAAAGGACGACATCTCGAAGC +
Preference number: 6 (lower is better)
Translates to: PQTPWGSWSVAP*PWSPQRTTSRS
Trigger: GCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp GGCCATGAAGTTCAAGAACACTGTGTTCACTGGGTCTaGCCCAGACACCACCGTCATCAGCTTCTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: GHEVQEHCVHWV*PRHHRHQLLLV
Trigger: GACGAGGAGAAGCTGATGACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGAACTTCATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325234.5
CDS CAA 90 bp CGGCTGAGCTGCTGCTTGTTGTATTCCACAAACTCCATGGGGCTCTaGGTCAGTTGCTCCATGGCCTTGGTCTCCACAAAGGACGACATC +
Preference number: 6 (lower is better)
Translates to: RLSCCLLYSTNSMGL*VSCSMALVSTKDDI
Trigger: GATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAACAAGCAGCAGCTCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp ATGTTCTTGACGGGGATCCGACCATCCTGGTTCACCTaGAGCTTCAGCTTCGTGTATGCTTTGCGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: MFLTGIRPSWFT*SFSFVYALRRK
Trigger: CTTCCTGCGCAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGTCGGATCCCCGTCAAGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp AGCACTTCGTTGAGTCTCGGGTCGCGTTGCTTCTGGTaGATGAAGTCCATGAGCTGCTCCAGCGTCAGGTAT +
Preference number: 6 (lower is better)
Translates to: STSLSLGSRCFW*MKSMSCSSVRY
Trigger: ATACCTGACGCTGGAGCAGCTCATGGACTTCATCAACCAGAAGCAACGCGACCCGAGACTCAACGAAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp GTCAGTTCCGCCTCCTTCTTATGCTTGTCCCTCATCTaGGCCTCCGAGATGCTGTTATGGCGCTTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: VSSASFLCLSLI*ASEMLLWRFLS
Trigger: GGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp ATGTGCCGACGGTTAATCTCCGTCAGTTCCGCCTCCTTCTTATGCTaGTCCCTCATCTTGGCCTCCGAGATGCTGTTATGGCGCTTTCTG +
Preference number: 6 (lower is better)
Translates to: MCRRLISVSSASFLC*SLILASEMLLWRFL
Trigger: CAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAACTGACGGAGATTAACCGTCGGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp GTTCATCTCTTTCAGCCTCTTGAACTGAGTTGTGTTTaGATCAAGGACGACCTCCCTGAGCCGCTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: VHLFQPLELSCV*IKDDLPEPLQS
Trigger: GCTCTGCAGCGGCTCAGGGAGGTCGTCCTTGATGCAAACACAACTCAGTTCAAGAGGCTGAAAGAGATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp CGACGGTTAATCTCCGTCAGTTCCGCCTCCTTCTTATaGTTGTCCCTCATCTTGGCCTCCGAGATGCTGTTA +
Preference number: 6 (lower is better)
Translates to: RRLISVSSASFL*LSLILASEMLL
Trigger: TAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAACTGACGGAGATTAACCGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp ACTCCATGGGGCTCTTGGTCAGTTGCTCCATGGCCTTaGTCTCCACAAAGGACGACATCTCGAAGCATTTGT +
Preference number: 6 (lower is better)
Translates to: TPWGSWSVAPWP*SPQRTTSRSIC
Trigger: ACAAATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp GCTGCTTGTTGTATTCCACAAACTCCATGGGGCTCTTaGTCAGTTGCTCCATGGCCTTGGTCTCCACAAAGG +
Preference number: 6 (lower is better)
Translates to: AACCIPQTPWGS*SVAPWPWSPQR
Trigger: CCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAACAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp TCAGTTCCGCCTCCTTCTTATGCTTGTCCCTCATCTTaGCCTCCGAGATGCTGTTATGGCGCTTTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: SVPPPSYACPSS*PPRCCYGAFCP
Trigger: TGGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp AACTCCATGGGGCTCTTGGTCAGTTGCTCCATGGCCTaGGTCTCCACAAAGGACGACATCTCGAAGCATTTG +
Preference number: 6 (lower is better)
Translates to: NSMGLLVSCSMA*VSTKDDISKHL
Trigger: CAAATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp CGGTTAATCTCCGTCAGTTCCGCCTCCTTCTTATGCTaGTCCCTCATCTTGGCCTCCGAGATGCTGTTATGG +
Preference number: 6 (lower is better)
Translates to: RLISVSSASFLC*SLILASEMLLW
Trigger: CCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAACTGACGGAGATTAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp CTGCTGCTTGTTGTATTCCACAAACTCCATGGGGCTCTTGGTCAGTaGCTCCATGGCCTTGGTCTCCACAAAGGACGACATCTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: LLLVVFHKLHGALGQ*LHGLGLHKGRHLEA
Trigger: TGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAACAAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp TTAATCTCCGTCAGTTCCGCCTCCTTCTTATGCTTGTCCCTCATCTaGGCCTCCGAGATGCTGTTATGGCGCTTTCTGTCCAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: LISVSSASFLCLSLI*ASEMLLWRFLSRIF
Trigger: GAAGATCCTGGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGGAGGCGGAACTGACGGAGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp TTGTATTCCACAAACTCCATGGGGCTCTTGGTCAGTTaGTCCATGGCCTTGGTCTCCACAAAGGACGACATC +
Preference number: 6 (lower is better)
Translates to: LYSTNSMGLLVS*SMALVSTKDDI
Trigger: GATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS GCA 72 bp CCTTCTTATGCTTGTCCCTCATCTTGGCCTCCGAGATaGTGTTATGGCGCTTTCTGTCCAGGATCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: PSYACPSSWPPR*CYGAFCPGSSA
Trigger: TGCAGAAGATCCTGGACAGAAAGCGCCATAACAGCATCTCGGAGGCCAAGATGAGGGACAAGCATAAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CCA 72 bp ATCTTCAGGATGTTCTTGACGGGGATCCGACCATCCTaGTTCACCTGCAGCTTCAGCTTCGTGTATGCTTTG +
Preference number: 6 (lower is better)
Translates to: IFRMFLTGIRPS*FTCSFSFVYAL
Trigger: CAAAGCATACACGAAGCTGAAGCTGCAGGTGAACCAGGATGGTCGGATCCCCGTCAAGAACATCCTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 72 bp TGCTGCTTGTTGTATTCCACAAACTCCATGGGGCTCTaGGTCAGTTGCTCCATGGCCTTGGTCTCCACAAAG +
Preference number: 6 (lower is better)
Translates to: CCLLYSTNSMGL*VSCSMALVSTK
Trigger: CTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATACAACAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5
CDS CAA 90 bp TATTCCACAAACTCCATGGGGCTCTTGGTCAGTTGCTCCATGGCCTaGGTCTCCACAAAGGACGACATCTCGAAGCATTTGTTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: YSTNSMGLLVSCSMA*VSTKDDISKHLFLF
Trigger: AAAGAGGAACAAATGCTTCGAGATGTCGTCCTTTGTGGAGACCAAGGCCATGGAGCAACTGACCAAGAGCCCCATGGAGTTTGTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279230.12
ENST00000325234.5
ENST00000540288.5