RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLBD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000151176

Ensembl transcript IDs: ENST00000280800.5, ENST00000545182.6, ENST00000547163.1, ENST00000548997.1

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGGTaGTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGC +
Preference number: 1 (lower is better)
Translates to: SPAPGPPVGMQLGEG*WNRLLPPHGSPRVC
Trigger: GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR GCA 90 bp GGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTaGCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACGAGGA +
Preference number: 1 (lower is better)
Translates to: GCWNRLLPPHGSPRV*PRTFPNPQEGEARG
Trigger: TCCTCGTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR GCA 90 bp CAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATaGAGCTGGGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATG +
Preference number: 1 (lower is better)
Translates to: QRPDKAHQLQGHPWE*SWEKGAGTGSFHPM
Trigger: CATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR GCA 90 bp CACAGCATGGGGCCACAGCCGCTCTTGTTTAATGGTGGCACAGCCTaGGGTCTGGTTCCTCCATCAGGGCGCTGTGGGTATGGCCCTGAG +
Preference number: 1 (lower is better)
Translates to: HSMGPQPLLFNGGTA*GLVPPSGRCGYGPE
Trigger: CTCAGGGCCATACCCACAGCGCCCTGATGGAGGAACCAGACCGCAGGCTGTGCCACCATTAAACAAGAGCGGCTGTGGCCCCATGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 90 bp CGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTaGGAATGCAGCTGGGAGAAGGGTGCTGGAACAGGCTCCTTCCAC +
Preference number: 1 (lower is better)
Translates to: RRQRPDKAHQLQGHP*ECSWEKGAGTGSFH
Trigger: GTGGAAGGAGCCTGTTCCAGCACCCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR CCA 90 bp CTGCAGCAGGAGGAACCCCAAGGGTTTGATGGTGAACTTCCCAGCTaGGAAGCTCACACGGCCTTCGTAGCTGTCCTCCAGGCCTTTCAG +
Preference number: 1 (lower is better)
Translates to: LQQEEPQGFDGELPS*EAHTAFVAVLQAFQ
Trigger: CTGAAAGGCCTGGAGGACAGCTACGAAGGCCGTGTGAGCTTCCCAGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCTCCTGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548997.1
3UTR CCA 90 bp CTGCCTGACATGGAGAGAGGACATTCAGAACCCTCCAGCCACAGATaGCCAGAAACTTTGGTTTGTGTTTGTTTTCAAGTTTCTGTCCTC +
Preference number: 1 (lower is better)
Translates to: LPDMERGHSEPSSHR*PETLVCVCFQVSVL
Trigger: GAGGACAGAAACTTGAAAACAAACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTCTCCATGTCAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 90 bp TTTGTATCTGTCTGTATACCACAATATGGCTTAGGAAGGTCTTGGTaGTTAACAAGGCTCCCAAATAGGACCCAGAACACAGGTGCTCAA +
Preference number: 1 (lower is better)
Translates to: FVSVCIPQYGLGRSW*LTRLPNRTQNTGAQ
Trigger: TTGAGCACCTGTGTTCTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTGTGGTATACAGACAGATACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 90 bp AAAAGAAGAAGAAAGAAAATGGACAGATGGAGATGGCTGAATGGTTaGATGGGTGGTTGGATGGGTGAGTGGATGGATGATAAATGGATA +
Preference number: 1 (lower is better)
Translates to: KRRRKKMDRWRWLNG*MGGWMGEWMDDKWI
Trigger: TATCCATTTATCATCCATCCACTCACCCATCCAACCACCCATCCAACCATTCAGCCATCTCCATCTGTCCATTTTCTTTCTTCTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR-3UTR GCA 90 bp AAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGAGGAAGAGACGCCACGGTaGCCACCCACCTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: KGRRGDCFLREQRGQSWEEETPR*PPTSGE
Trigger: CTCCCCCGAGGTGGGTGGGCACCGTGGCGTCTCTTC...CTCCCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR GCA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCGAAGAGACGCCACGGTaGCCACCCACCTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRAEETPR*PPTSGE
Trigger: CTCCCCCGAGGTGGGTGGGCACCGTGGCGTCTCTTC...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR GCA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGGAGCCCCAGAGTCTaGCCCAGGACCTTCCCAAAC +
Preference number: 2 (lower is better)
Translates to: PERETRGLLPEGAEGPELGSPRV*PRTFPN
Trigger: GTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCCC...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR GCA 90 bp GGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGGGCCACCCGTGGGAATaGAGCTGGGAGAAGGGTGCT +
Preference number: 2 (lower is better)
Translates to: GSCPERETRGLLPEGAEGGHPWE*SWEKGA
Trigger: AGCACCCTTCTCCCAGCTGCATTCCCACGGGTGGCC...CCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR CCA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCGAGTTAGAAGTCCGGTaGCCTTGGGACGGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPELEVR*PWDGGD
Trigger: GTCACCCCCGTCCCAAGGCCACCGGACTTCTAACTC...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR TCA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGCCCCATCAGGTTCGTaGCCCACTCTAGGAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PERETRGLLPEGAEGPELAPSGS*PTLGGD
Trigger: ATCTCCTCCTAGAGTGGGTCACGAACCTGATGGGGC...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR GCA 90 bp GGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCAGCTGGGAGAAGGGTaGTGGAACAGGCTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: GSCPERETRGLLPEGAEGQLGEG*WNRLLP
Trigger: TGGAAGGAGCCTGTTCCAGCACCCTTCTCCCAGCTG...CCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR CCA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCGAGTTAGAAGTCCGGTaGCCTTGGGACGGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSELEVR*PWDGGD
Trigger: GTCACCCCCGTCCCAAGGCCACCGGACTTCTAACTC...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR TCA 90 bp AATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGGCCCCATCAGGTTCGTaGCCCACTCTAGGAGGAGAT +
Preference number: 2 (lower is better)
Translates to: NASRRQRPDKAHQLQGHPAPSGS*PTLGGD
Trigger: ATCTCCTCCTAGAGTGGGTCACGAACCTGATGGGGC...CGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR CAA 90 bp GCAGGAGGGTCAGCCGCACCTGGTGCCAGTAAGGTGAGTCTGGGTTaGACTCCATCTCTTCCTGCATCCACTCTAGGTTGGCCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: AGGSAAPGASKVSLG*TPSLPASTLGWPPG
Trigger: TCCTGGAGGCCAACCTAGAGTGGATGCAGGAAGAGATGGAGTCAAACCCAGACTCACCTTACTGGCACCAGGTGCGGCTGACCCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548997.1
3UTR-3UTR TCA 90 bp CCATGGGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGACACTCTAGGAGGAGATaGCTCAGACCCCAGATCAGA +
Preference number: 2 (lower is better)
Translates to: PWEPQSLPQDLPKPSGRRHSRRR*LRPQIR
Trigger: TCTGATCTGGGGTCTGAGTCATCTCCTCCTAGAGTG...TCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR GCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGAAGCTGGGAGGAGCAATaGCAGCCGAAGACAACGCCC +
Preference number: 2 (lower is better)
Translates to: LFSSFCPQGSCPERETRGSWEEQ*QPKTTP
Trigger: GGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCT...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR TCA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCCACTCTAGGAGGAGATaGCTCAGACCCCAGATCAGA +
Preference number: 2 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCHSRRR*LRPQIR
Trigger: TCTGATCTGGGGTCTGAGTCATCTCCTCCTAGAGTG...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR-3UTR CCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGGGCTTAGGAAGGTCTTaGTGGTTAACAAGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: CFPLSKHTALGESCLQGRGLGRS*WLTRLP
Trigger: TGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCC...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR-3UTR CCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGGATCTCATAGGTGGATaGATGAGTCAATGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: CFPLSKHTALGESCLQGRDLIGG*MSQWLD
Trigger: ATCCAGCCATTGACTCATCCATCCACCTATGAGATC...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CAA 90 bp GAGAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTaGGTTTGTGTTTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: ERGHSEPSSHRWPET*VCVCFQVSVLKEAA
Trigger: GGCAGCTTCCTTGAGGACAGAAACTTGAAAACAAACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 72 bp CGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTaGGAATGCAGCTGGGAGAAGGGTGCTGGAACAGGC +
Preference number: 3 (lower is better)
Translates to: RPDKAHQLQGHP*ECSWEKGAGTG
Trigger: GCCTGTTCCAGCACCCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR GCA 72 bp AACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTaGCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: NRLLPPHGSPRV*PRTFPNPQEGE
Trigger: TTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
3UTR CCA 72 bp AGCCGCTCTTGTTTAATGGTGGCACAGCCTGCGGTCTaGTTCCTCCATCAGGGCGCTGTGGGTATGGCCCTG +
Preference number: 3 (lower is better)
Translates to: SRSCLMVAQPAV*FLHQGAVGMAL
Trigger: CAGGGCCATACCCACAGCGCCCTGATGGAGGAACCAGACCGCAGGCTGTGCCACCATTAAACAAGAGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 72 bp GAGGCAGAAGCATGGGGGCTGACCCTCTGCCTGACATaGAGAGAGGACATTCAGAACCCTCCAGCCACAGAT +
Preference number: 3 (lower is better)
Translates to: EAEAWGLTLCLT*REDIQNPPATD
Trigger: ATCTGTGGCTGGAGGGTTCTGAATGTCCTCTCTCCATGTCAGGCAGAGGGTCAGCCCCCATGCTTCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 72 bp GAGGAACCCCAAGGGTTTGATGGTGAACTTCCCAGCTaGGAAGCTCACACGGCCTTCGTAGCTGTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: EEPQGFDGELPS*EAHTAFVAVLQ
Trigger: CTGGAGGACAGCTACGAAGGCCGTGTGAGCTTCCCAGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548997.1
3UTR CCA 72 bp GGGCTGTGTGCTTTCCTCTCTCCAAGCACACAGCACTaGGAGAGTCTTGTCTCCAAGGCAGGCTGCATGAGA +
Preference number: 3 (lower is better)
Translates to: GLCAFLSPSTQH*ESLVSKAGCMR
Trigger: TCTCATGCAGCCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 72 bp GTCTGTATACCACAATATGGCTTAGGAAGGTCTTGGTaGTTAACAAGGCTCCCAAATAGGACCCAGAACACA +
Preference number: 3 (lower is better)
Translates to: VCIPQYGLGRSW*LTRLPNRTQNT
Trigger: TGTGTTCTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTGTGGTATACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CCA 72 bp TCTGTCTGTATACCACAATATGGCTTAGGAAGGTCTTaGTGGTTAACAAGGCTCCCAAATAGGACCCAGAAC +
Preference number: 3 (lower is better)
Translates to: SVCIPQYGLGRS*WLTRLPNRTQN
Trigger: GTTCTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTGTGGTATACAGACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGGAGGCTGGAGGGACCTaGCCATCGCGCGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRREAGGT*PSRAQR
Trigger: CCGCTGGGCGCGCGATGGGCAGGTCCCTCCAGCCTC...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGGCGGCTGCGGGAGGCTaGAGGGACCTGCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: NASRRQRPDKAHQLQGHPAAAGG*RDLPIA
Trigger: CGCGATGGGCAGGTCCCTCCAGCCTCCCGCAGCCGC...CGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCGCGGCTGCGGGAGGCTaGAGGGACCTGCCCATCGCG +
Preference number: 4 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRAAAAGG*RDLPIA
Trigger: CGCGATGGGCAGGTCCCTCCAGCCTCCCGCAGCCGC...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGACCGAGGCCAGGCGGTTaGCCACGATGTTGCGTACCC +
Preference number: 4 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRPRPGG*PRCCVP
Trigger: GGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGG...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp CCATGGGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGACGCGGATGGCGTTGGTaGGGTTGGCCCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: PWEPQSLPQDLPKPSGRRRGWRW*GWPRPR
Trigger: CCGTGGCCTGGGCCAACCTCACCAACGCCATCCGCG...TCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACCGCGGATGGCGTTGGTaGGGTTGGCCCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHRGWRW*GWPRPR
Trigger: CCGTGGCCTGGGCCAACCTCACCAACGCCATCCGCG...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGCCCACGTGGGACCGCTaGCCGCCAGCAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRPTWDR*PPAGSG
Trigger: TCCTGAGCCTGCTGGCGGCCAGCGGTCCCACGTGGG...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCCCCACGTGGGACCGCTaGCCGCCAGCAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRAPTWDR*PPAGSG
Trigger: TCCTGAGCCTGCTGGCGGCCAGCGGTCCCACGTGGG...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGCGAGGTGCTCCACTaGAACGGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PERETRGLLPEGAEGPELGEVLH*NGGTWS
Trigger: GGACCAGGTGCCCCCGTTCCAGTGGAGCACCTCGCC...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CCAGATCAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCGAAGAGACGCCACGGTaGCCACCCACCTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PDQRTKPPGGAGVRSPVAEETPR*PPTSGE
Trigger: CTCCCCCGAGGTGGGTGGGCACCGTGGCGTCTCTTC...GGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTGATCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp ACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACGGGGGAGGCCCCAAGTGGGCTaGATCACATCCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TKPPGGAGVRSPVALGRGRPQVG*ITSPRE
Trigger: TTCCCTGGGGGATGTGATGCAGCCCACTTGGGGCCT...CCCCCGTCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCATGACCGCACAATGCTaGGCCCCGCAGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPMTAQC*APQPGS
Trigger: TGACCCGGGCTGCGGGGCGCAGCATTGTGCGGTCAT...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS-3UTR GCA 90 bp CCAGATCAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCACCATGACCGCACAATaGTGCGCCCCGCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PDQRTKPPGGAGVRSPVATMTAQ*CAPQPG
Trigger: CCCGGGCTGCGGGGCGCAGCATTGTGCGGTCATGGT...GGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTGATCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS-3UTR CCA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGAAACCAGTCCCCATACTaGGCCACTAGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRNQSPY*ATRACS
Trigger: GCTGCAGGCCCTAGTGGCCCAGTATGGGGACTGGTT...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCGCACCTGGTCCCACGTaGGACCGCTGGCCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSAPGPT*DRWPPA
Trigger: TGCTGGCGGCCAGCGGTCCCACGTGGGACCAGGTGC...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGAACGGGGGCACCTaGTCCCACGTGGGACCGCTG +
Preference number: 4 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSWNGGT*SHVGPL
Trigger: CAGCGGTCCCACGTGGGACCAGGTGCCCCCGTTCCA...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACTGGAACGGGGGCACCTaGTCCCACGTGGGACCGCTG +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHWNGGT*SHVGPL
Trigger: CAGCGGTCCCACGTGGGACCAGGTGCCCCCGTTCCA...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGGGCGAGGTGCTCCACTaGAACGGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRGEVLH*NGGTWS
Trigger: GGACCAGGTGCCCCCGTTCCAGTGGAGCACCTCGCC...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp CTCCAGGAAGCTCTTCAGCCTCTCGCAGTAGCCGACTTCATACTCGAAGGGGCCCGCGGATGGCGTTGGTaGGGTTGGCCCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LQEALQPLAVADFILEGARGWRW*GWPRPR
Trigger: CCGTGGCCTGGGCCAACCTCACCAACGCCATCCGCG...GGCCCCTTCGAGTATGAAGTCGGCTACTGCGAGAGGCTGAAGAGCTTCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR TCA 90 bp AATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGTGCAGCAGGCCGCTaGAGGGCGAGGTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: NASRRQRPDKAHQLQGHPCAAGR*RARCST
Trigger: AGTGGAGCACCTCGCCCTTCAGCGGCCTGCTGCACA...CGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp CCATGGGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGATGTGCAGCAGGCCGCTaGAGGGCGAGGTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: PWEPQSLPQDLPKPSGRRCAAGR*RARCST
Trigger: AGTGGAGCACCTCGCCCTTCAGCGGCCTGCTGCACA...TCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGCCCGGGCCAGGTGGCTaGCGGGGTAGCAGTACATCT +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRPGPGG*RGSSTS
Trigger: AGATGTACTGCTACCCCGGCAGCCACCTGGCCCGGG...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCCCCGGGCCAGGTGGCTaGCGGGGTAGCAGTACATCT +
Preference number: 4 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRAPGPGG*RGSSTS
Trigger: AGATGTACTGCTACCCCGGCAGCCACCTGGCCCGGG...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGATCTGGCTGGCCCATGTaGAGCAGGCCGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGSGWPM*SRPLKG
Trigger: GCCCTTCAGCGGCCTGCTGCACATGGGCCAGCCAGA...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCGGCCACCCGTGGGAATaGAGCTGGGAGAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCGHPWE*SWEKGA
Trigger: AGCACCCTTCTCCCAGCTGCATTCCCACGGGTGGCC...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGGACAGACAGAGGGCTaGACAGGAGGCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWGQTEG*TGGCMG
Trigger: CCCCATGCAGCCTCCTGTGCAGCCCTCTGTCTGTCC...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGTCCACCATAAGCAGCTaGCCCGCCGAGACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWSTISS*PAETSR
Trigger: CCTGGACGTCTCGGCGGGCCAGCTGCTTATGGTGGA...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGAGCCACGGCGTCAGGGTaGCGTCCGTCCACCATAAGC +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGATASG*RPSTIS
Trigger: GCTTATGGTGGACGGACGCCACCCTGACGCCGTGGC...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGATCAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCAGATGTCTGCCCAGGTaGCCCCATCCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PDQRTKPPGGAGVRSPVARCLPR*PHPRPG
Trigger: GCCTGGCCTCGGATGGGGCCACCTGGGCAGACATCT...GGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTGATCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGTTCCGCCGGAAGATCTaGGCCCGGGGGCTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: VLKEAAQKGRRGDCFLREFRRKI*ARGLPS
Trigger: TGACGGGAGCCCCCGGGCCCAGATCTTCCGGCGGAA...CTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCTTCCAGAGGTCTGGCTaGCCCATGTGCAGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCFQRSG*PMCSRP
Trigger: CGGCCTGCTGCACATGGGCCAGCCAGACCTCTGGAA...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGCTCCAGGGCCACCCGTaGGAATGCAGCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PERETRGLLPEGAEGPELLQGHP*ECSWEK
Trigger: CTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAG...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp ACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACGGGGGGCAGGCTTTGCACAGTaGCAGAGGGTCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TKPPGGAGVRSPVALGRGAGFAQ*QRVMEE
Trigger: TTCCTCCATGACCCTCTGTCACTGTGCAAAGCCTGC...CCCCCGTCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACGACGGGCGGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHDGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCCGCCCGTC...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCGAGATGCTGAGTGCATaGGGCCCCAAGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPEMLSA*GPKWAA
Trigger: TGCAGCCCACTTGGGGCCTCATGCACTCAGCATCTC...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGGAGGCTGGAGGGACCTaGCCATCGCGCGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVEAGGT*PSRAQR
Trigger: CCGCTGGGCGCGCGATGGGCAGGTCCCTCCAGCCTC...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGCTCCACCACACCGGCTaGATAGGCCTGCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWLHHTG*IGLQAV
Trigger: GACAGCTTGCAGGCCTATGCAGCCGGTGTGGTGGAG...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGACATTGGGCTGGGGGTTaGAGGCTTTGCACAGTGACA +
Preference number: 4 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRHWAGG*RLCTVT
Trigger: TGTCACTGTGCAAAGCCTGCAACCCCCAGCCCAATG...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCGGCCACCCGTGGGAATaGAGCTGGGAGAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSGHPWE*SWEKGA
Trigger: AGCACCCTTCTCCCAGCTGCATTCCCACGGGTGGCC...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGGCCACGGCGTCAGGGTaGCGTCCGTCCACCATAAGC +
Preference number: 4 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQATASG*RPSTIS
Trigger: GCTTATGGTGGACGGACGCCACCCTGACGCCGTGGC...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp ACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACGGGGGGGGCCTTCCCGGAACTaGAGCCAGTACTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: TKPPGGAGVRSPVALGRGGPSRN*SQYFLM
Trigger: CATCAAGAAGTACTGGCTCCAGTTCCGGGAAGGCCC...CCCCCGTCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGT
63% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGCGTCGCAGGAGAAGATaGTGCCGGGGTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWRRRRR*CRGRRR
Trigger: TCTCCTCCTACCCCGGCACCATCTTCTCCTGCGACG...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGCCAGCACACAGCCCCTaGGCCGCACATACTTCCACA +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWPAHSP*AAHTST
Trigger: TGTGGAAGTATGTGCGGCCCAGGGGCTGTGTGCTGG...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCAACCAGTCCCCATACTaGGCCACTAGGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCNQSPY*ATRACS
Trigger: GCTGCAGGCCCTAGTGGCCCAGTATGGGGACTGGTT...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGATCAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCCCTGAGGCAGAAGCATaGGGGCTGACCCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PDQRTKPPGGAGVRSPVAPEAEA*GLTLCL
Trigger: CAGGCAGAGGGTCAGCCCCCATGCTTCTGCCTCAGG...GGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTGATCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCGCACAGCCTGCGGTCTaGTTCCTCCATCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRAAQPAV*FLHQGA
Trigger: AGCGCCCTGATGGAGGAACCAGACCGCAGGCTGTGC...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGACACTCTAGGAGGAGATaGCTCAGACCCCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRHSRRR*LRPQIR
Trigger: TCTGATCTGGGGTCTGAGTCATCTCCTCCTAGAGTG...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGGAGGAGAAAAAGCGCTaGCCCCACCTTCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRREEKKR*PHLPCH
Trigger: GTGGCAGGGAAGGTGGGGTCAGCGCTTTTTCTCCTC...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCACATCTGGCCCACCATaGCCGCACAATGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSTSGPP*PHNAAP
Trigger: GGGCGCAGCATTGTGCGGTCATGGTGGGCCAGATGT...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS-3UTR GCA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCCTCCACCACACCGGCTaGATAGGCCTGCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRALHHTG*IGLQAV
Trigger: GACAGCTTGCAGGCCTATGCAGCCGGTGTGGTGGAG...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGTTGGCCACGATGTTaGGTACCCACTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: PERETRGLLPEGAEGPELGWPRC*VPTPAH
Trigger: GTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACC...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGATGGGCCACTAGGGCCTaGAGCCCACTGGCATTGAAC +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGWATRA*SPLALN
Trigger: GTTCAATGCCAGTGGGCTGCAGGCCCTAGTGGCCCA...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGATCCTGGCCAGTGACATaGTGGTCACCTTCACATCGA +
Preference number: 4 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRSWPVT*WSPSHR
Trigger: TCGATGTGAAGGTGACCAGCATGTCACTGGCCAGGA...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCCAGCTGGGAGAAGGGTaGTGGAACAGGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPQLGEG*WNRLLP
Trigger: TGGAAGGAGCCTGTTCCAGCACCCTTCTCCCAGCTG...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGGGCTGCACAGGAGGCTaGATGGGGGATGGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: VLKEAAQKGRRGDCFLREGCTGG*MGDGAE
Trigger: TTCTGCGCCATCCCCCATGCAGCCTCCTGTGCAGCC...CTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GGAGGGTCAGCCGCACCTGGTGCCAGTAAGGTGAGTCTGGGTTTGACTCCATCTGCCACGGCGTCAGGGTaGCGTCCGTCCACCATAAGC +
Preference number: 4 (lower is better)
Translates to: GGSAAPGASKVSLGLTPSATASG*RPSTIS
Trigger: GCTTATGGTGGACGGACGCCACCCTGACGCCGTGGC...AGATGGAGTCAAACCCAGACTCACCTTACTGGCACCAGGTGCGGCTGACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCGGTGAACTTCCCAGCTaGGAAGCTCACACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCGELPS*EAHTAF
Trigger: GAAGGCCGTGTGAGCTTCCCAGCTGGGAAGTTCACC...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp ACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACGGGGGTTGTTCCAGGTGTTGTaGGCAACCAGGAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: TKPPGGAGVRSPVALGRGLFQVL*ATRRSL
Trigger: GAGTGACCTCCTGGTTGCCCACAACACCTGGAACAA...CCCCCGTCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGTTCTCCCCATTGGGCTaGGGGTTGCAGGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWFSPLG*GLQALH
Trigger: GTGCAAAGCCTGCAACCCCCAGCCCAATGGGGAGAA...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp ACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACGGGGGCCAAGCACACAGCACTaGGAGAGTCTTGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TKPPGGAGVRSPVALGRGPSTQH*ESLVSK
Trigger: CTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGG...CCCCCGTCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACGCAGCCCACTGGCATTaGACACAGTCTCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHAAHWH*TQSRRT
Trigger: CGTCCTTCGAGACTGTGTTCAATGCCAGTGGGCTGC...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACAGGATCCTGGCCAGTaGCATGCTGGTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGQDPGQ*HAGHLH
Trigger: GTGAAGGTGACCAGCATGTCACTGGCCAGGATCCTG...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCGGAGCACCGAGCGGCTaGGGGAGGCTGGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCGAPSG*GRLEGP
Trigger: AGGTCCCTCCAGCCTCCCGCAGCCGCTCGGTGCTCC...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCGGGCTGGGTTCTTGTTaGCAATGGTGGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCGLGSC*QWWSPV
Trigger: CACTGGAGACCACCATTGGCAACAAGAACCCAGCCC...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGGGCTGGGTTCTTGTTaGCAATGGTGGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWGLGSC*QWWSPV
Trigger: CACTGGAGACCACCATTGGCAACAAGAACCCAGCCC...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp AATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGCCTCTTGAAGATGTCTaGCCAGGTGGCCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: NASRRQRPDKAHQLQGHPPLEDV*PGGPIR
Trigger: TCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGG...CGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGCAGCTGGGAGAAGGGTaGTGGAACAGGCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRQLGEG*WNRLLP
Trigger: TGGAAGGAGCCTGTTCCAGCACCCTTCTCCCAGCTG...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGTGTCCTCAAGGAAGCTaGCCAGAAAGGGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: GSCPERETRGLLPEGAEGCPQGS*PERETR
Trigger: CCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACA...CCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGCCCCCAGGGAAACGCTaGTCACACCATTACCCCATT +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWPPGKR*SHHYPI
Trigger: AATGGGGTAATGGTGTGAGCAGCGTTTCCCTGGGGG...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGACCCAGACCCCAACCTTaGTTTATTTTCTCCACGGGT +
Preference number: 4 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRPRPQP*FIFSTG
Trigger: ACCCGTGGAGAAAATAAAGCAAGGTTGGGGTCTGGG...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGACCAGGAGGTCACTCTaGCCAGGGAGCAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRTRRSL*PGSSLM
Trigger: CATCAAGCTGCTCCCTGGCCAGAGTGACCTCCTGGT...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGATCAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCACCAGGAGGTCACTCTaGCCAGGGAGCAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PDQRTKPPGGAGVRSPVATRRSL*PGSSLM
Trigger: CATCAAGCTGCTCCCTGGCCAGAGTGACCTCCTGGT...GGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTGATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGTTCCGCCGGAAGATCTaGGCCCGGGGGCTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVFRRKI*ARGLPS
Trigger: TGACGGGAGCCCCCGGGCCCAGATCTTCCGGCGGAA...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCGCACCTGGTCCCACGTaGGACCGCTGGCCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCAPGPT*DRWPPA
Trigger: TGCTGGCGGCCAGCGGTCCCACGTGGGACCAGGTGC...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGATCAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCGAACTTCCAGAGGTCTaGCTGGCCCATGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PDQRTKPPGGAGVRSPVAELPEV*LAHVQQ
Trigger: CTGCTGCACATGGGCCAGCCAGACCTCTGGAAGTTC...GGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTGATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACGAACTTCCAGAGGTCTaGCTGGCCCATGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHELPEV*LAHVQQ
Trigger: CTGCTGCACATGGGCCAGCCAGACCTCTGGAAGTTC...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCGAGTTAGAAGTCCGGTaGCCTTGGGACGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSELEVR*PWDGGD
Trigger: GTCACCCCCGTCCCAAGGCCACCGGACTTCTAACTC...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGATCCAGTGCATGTAGATaGGCTCCTCCGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGSSACR*APPTQQ
Trigger: CTGCTGTGTCGGAGGAGCTCATCTACATGCACTGGA...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGTGGGCCCACCCGGGATaGACGCCTTGTAGTCCACGA +
Preference number: 4 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLWAHPG*TPCSPR
Trigger: TCGTGGACTACAAGGCGTTCATCCCGGGTGGGCCCA...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGGCAGCCCACTGGCATTaGACACAGTCTCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQAAHWH*TQSRRT
Trigger: CGTCCTTCGAGACTGTGTTCAATGCCAGTGGGCTGC...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCGGATCCCTCCCTGTCTaGTCTCATAGGTGGATGGAT +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCGSLPV*SHRWMD
Trigger: ATCCATCCACCTATGAGATCAGACAGGGAGGGATCC...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGAGAAGACCAGCTTGTTaGCGGGAACCAGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRRRPAC*REPAGS
Trigger: ACTACCCGCTGGTTCCCGGCAACAAGCTGGTCTTCT...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGAAGAAGACCAGCTTGTTaGCGGGAACCAGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGRRPAC*REPAGS
Trigger: ACTACCCGCTGGTTCCCGGCAACAAGCTGGTCTTCT...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCGGTTGGCCACGATGTTaGGTACCCACTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSGWPRC*VPTPAH
Trigger: GTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACC...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCCTCTTGAAGATGTCTaGCCAGGTGGCCCCATCCGA +
Preference number: 4 (lower is better)
Translates to: VLKEAAQKGRRGDCFLREPLEDV*PGGPIR
Trigger: TCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGG...CTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACATTGGGCTGGGGGTTaGAGGCTTTGCACAGTGACA +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGHWAGG*RLCTVT
Trigger: TGTCACTGTGCAAAGCCTGCAACCCCCAGCCCAATG...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCTCCTGGCCAGTGACATaGTGGTCACCTTCACATCGA +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCSWPVT*WSPSHR
Trigger: TCGATGTGAAGGTGACCAGCATGTCACTGGCCAGGA...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCGCATCCACTCTAGGTTaGCCTCCAGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPASTLG*PPGSSS
Trigger: TGAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGC...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGCTAGATGTCTGCCCAGGTaGCCCCATCCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSSLQAHSTGRVLSPRQARCLPR*PHPRPG
Trigger: GCCTGGCCTCGGATGGGGCCACCTGGGCAGACATCT...AGCCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCTCTTGTACCAGTGACTaGTTCCGCCGGAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCSCTSD*FRRKIW
Trigger: CCAGATCTTCCGGCGGAACCAGTCACTGGTACAAGA...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTTCTCCCCATTGGGCTaGGGGTTGCAGGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSFSPLG*GLQALH
Trigger: GTGCAAAGCCTGCAACCCCCAGCCCAATGGGGAGAA...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGGCACAGGAGGCTGCATaGGGGATGGCGCAGAACCCA +
Preference number: 4 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLAQEAA*GMAQNP
Trigger: TGGGTTCTGCGCCATCCCCCATGCAGCCTCCTGTGC...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGAGACGGATGGGTGGGTaGAAGGCTGTGCAGATGGAT +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRRRMGG*KAVQMD
Trigger: ATCCATCTGCACAGCCTTCCACCCACCCATCCGTCT...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACATGATGGAAGACGGATaGGTGGGTGGAAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHMMEDG*VGGRLC
Trigger: GCACAGCCTTCCACCCACCCATCCGTCTTCCATCAT...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
3UTR CAA 72 bp TCCCCAGAGAGCTGCAGCAGGAGGAACCCCAAGGGTTaGATGGTGAACTTCCCAGCTGGGAAGCTCACACGG +
Preference number: 4 (lower is better)
Translates to: SPESCSRRNPKG*MVNFPAGKLTR
Trigger: CCGTGTGAGCTTCCCAGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCTCCTGCTGCAGCTCTCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR TCA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCGCAGGCTTTGCACAGTaGCAGAGGGTCATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSAGFAQ*QRVMEE
Trigger: TTCCTCCATGACCCTCTGTCACTGTGCAAAGCCTGC...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCAGAACTTCAGTCCCATaGAACCTTGACAGGCGCGAA +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCRTSVP*NLDRRE
Trigger: TTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCT...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCCACTCTAGGAGGAGATaGCTCAGACCCCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSHSRRR*LRPQIR
Trigger: TCTGATCTGGGGTCTGAGTCATCTCCTCCTAGAGTG...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGGGGAGCCCCAGAGTCTaGCCCAGGACCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: CFPLSKHTALGESCLQGRGSPRV*PRTFPN
Trigger: GTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCCC...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGCTGGGAGGAGCAATaGCAGCCGAAGACAACGCCC +
Preference number: 4 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLSWEEQ*QPKTTP
Trigger: GGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCT...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGGAAGCAGAGGTTaGAGTGAGCAGAGATTATGC +
Preference number: 4 (lower is better)
Translates to: GSCPERETRGLLPEGAEGPGSRG*SEQRLC
Trigger: GCATAATCTCTGCTCACTGCAACCTCTGCTTCCTGG...CCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp ATCTCTTCCTGCATCCACTCTAGGTTGGCCTCCAGGAAGCTCTTCAGCCTCTCGTCCACCATAAGCAGCTaGCCCGCCGAGACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISSCIHSRLASRKLFSLSSTISS*PAETSR
Trigger: CCTGGACGTCTCGGCGGGCCAGCTGCTTATGGTGGA...CGAGAGGCTGAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGCAGGAAGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CCA 90 bp AAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGAGAAGCTGTCATTGTATTaGCCACTTGTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGRRGDCFLREQRGQSWEKLSLY*PLVPSS
Trigger: GGAGCTGGGCACAAGTGGCCAATACAATGACAGCTT...CTCCCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGAGCATCCACTCTAGGTTaGCCTCCAGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGASTLG*PPGSSS
Trigger: TGAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGC...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGATCAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTCTTGTTGCCAATGGTaGTCTCCAGTGTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: PDQRTKPPGGAGVRSPVASCCQW*SPVSPA
Trigger: GGCTGGTGACACTGGAGACCACCATTGGCAACAAGA...GGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTGATCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGGGTTCTTGTTGCCAATaGTGGTCTCCAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: GSCPERETRGLLPEGAEGGSCCQ*WSPVSP
Trigger: TGGTGACACTGGAGACCACCATTGGCAACAAGAACC...CCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGAGGGTTCTTGTTGCCAATaGTGGTCTCCAGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: KGRRGDCFLREQRGQSWEGSCCQ*WSPVSP
Trigger: TGGTGACACTGGAGACCACCATTGGCAACAAGAACC...CTCCCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGTCCACGATCATCCACTaGTTGTTATACGTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PERETRGLLPEGAEGPELSTIIH*LLYVPL
Trigger: CAGCGGCACGTATAACAACCAGTGGATGATCGTGGA...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGATCTTGTACCAGTGACTaGTTCCGCCGGAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGSCTSD*FRRKIW
Trigger: CCAGATCTTCCGGCGGAACCAGTCACTGGTACAAGA...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGAGTGGCCAGTGACATGCTaGTCACCTTCACATCGATAC +
Preference number: 4 (lower is better)
Translates to: KGRRGDCFLREQRGQSWEWPVTC*SPSHRY
Trigger: GTATCGATGTGAAGGTGACCAGCATGTCACTGGCCA...CTCCCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGCATGTCTTGTACCAGTaGCTGGTTCCGCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQHVLYQ*LVPPED
Trigger: ATCTTCCGGCGGAACCAGTCACTGGTACAAGACATG...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGGACTCCATCTCTTCCTaGATCCACTCTAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQDSISS*IHSRLA
Trigger: GGCCAACCTAGAGTGGATGCAGGAAGAGATGGAGTC...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCGGGAGACGAGGGGACTaGTTCCTGAGGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCGRRGD*FLREQR
Trigger: CCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCC...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGAAGCTGTCATTGTATTaGCCACTTGTGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRKLSLY*PLVPSS
Trigger: GGAGCTGGGCACAAGTGGCCAATACAATGACAGCTT...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GCAGGAGGGTCAGCCGCACCTGGTGCCAGTAAGGTGAGTCTGGGTTTGACTCCAGCATCCACTCTAGGTTaGCCTCCAGGAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGGSAAPGASKVSLGLTPASTLG*PPGSSS
Trigger: TGAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGC...TGGAGTCAAACCCAGACTCACCTTACTGGCACCAGGTGCGGCTGACCCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGCGTCGCAGGAGAAGATaGTGCCGGGGTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CFPLSKHTALGESCLQGRRRRRR*CRGRRR
Trigger: TCTCCTCCTACCCCGGCACCATCTTCTCCTGCGACG...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCATACTTCCACAGGGCTaGGTTCTTGTTGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCILPQG*VLVANG
Trigger: ACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTAT...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGCCAGCACACAGCCCCTaGGCCGCACATACTTCCACA +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVPAHSP*AAHTST
Trigger: TGTGGAAGTATGTGCGGCCCAGGGGCTGTGTGCTGG...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGAGTGACAGAGGGTCATaGAGGAAGTCATTGTACCTC +
Preference number: 4 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWSDRGS*RKSLYL
Trigger: GAGGTACAATGACTTCCTCCATGACCCTCTGTCACT...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACACCCTCTGCCTGACATaGAGAGAGGACATTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHTLCLT*REDIQN
Trigger: GTTCTGAATGTCCTCTCTCCATGTCAGGCAGAGGGT...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GGCAGAAGCATGGGGGCTGACCCTCTGCCTGACATGGAGAGAGGACATTCAGAATCCAGTGCATGTAGATaGGCTCCTCCGACACAGCAG +
Preference number: 4 (lower is better)
Translates to: GRSMGADPLPDMERGHSESSACR*APPTQQ
Trigger: CTGCTGTGTCGGAGGAGCTCATCTACATGCACTGGA...TTCTGAATGTCCTCTCTCCATGTCAGGCAGAGGGTCAGCCCCCATGCTTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGTGTACCTCATCAGCCTaGCCATGGAGTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: VLKEAAQKGRRGDCFLRECTSSA*PWSPCL
Trigger: AAGACATGGACTCCATGGTCAGGCTGATGAGGTACA...CTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGCAGGATCCTGGCCAGTaGCATGCTGGTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: CFPLSKHTALGESCLQGRQDPGQ*HAGHLH
Trigger: GTGAAGGTGACCAGCATGTCACTGGCCAGGATCCTG...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGCTAATAAAGAGATGCTaGGTGCATGAGGCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRLIKRC*VHEAPS
Trigger: ACTTGGGGCCTCATGCACTCAGCATCTCTTTATTAG...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp GGAGGGTCAGCCGCACCTGGTGCCAGTAAGGTGAGTCTGGGTTTGACTCCATCTGACTCCATCTCTTCCTaGATCCACTCTAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGSAAPGASKVSLGLTPSDSISS*IHSRLA
Trigger: GGCCAACCTAGAGTGGATGCAGGAAGAGATGGAGTC...AGATGGAGTCAAACCCAGACTCACCTTACTGGCACCAGGTGCGGCTGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR GCA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTGGGCCACTAGGGCCTaGAGCCCACTGGCATTGAAC +
Preference number: 4 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCWATRA*SPLALN
Trigger: GTTCAATGCCAGTGGGCTGCAGGCCCTAGTGGCCCA...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp TTTAATGGTGGCACAGCCTGCGGTCTGGTTCCTCCATCAGGGCGCTGTGGGTATGGGGGTTGCAGGCTTTaGACAGTGACAGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FNGGTACGLVPPSGRCGYGGCRL*TVTEGH
Trigger: ATGACCCTCTGTCACTGTGCAAAGCCTGCAACCCCC...ATACCCACAGCGCCCTGATGGAGGAACCAGACCGCAGGCTGTGCCACCATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGGGTGAACTTCCCAGCTaGGAAGCTCACACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVGELPS*EAHTAF
Trigger: GAAGGCCGTGTGAGCTTCCCAGCTGGGAAGTTCACC...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp TCCATCTCTTCCTGCATCCACTCTAGGTTGGCCTCCAGGAAGCTCTTCAGCCTCGGTGAACTTCCCAGCTaGGAAGCTCACACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SISSCIHSRLASRKLFSLGELPS*EAHTAF
Trigger: GAAGGCCGTGTGAGCTTCCCAGCTGGGAAGTTCACC...GAGGCTGAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGCAGGAAGAGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CCA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGACGGTATGTTGTAGCTaGCCCAGTAGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQTVCCS*PSRSSG
Trigger: ACCAGAAGACCTACTGGGCCAGCTACAACATACCGT...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTGGCCAGTGACATGCTaGTCACCTTCACATCGATAC +
Preference number: 4 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSWPVTC*SPSHRY
Trigger: GTATCGATGTGAAGGTGACCAGCATGTCACTGGCCA...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGGCAGGCTCAGGATCCTaGCCAGTGACATGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CFPLSKHTALGESCLQGRAGSGS*PVTCWS
Trigger: TGACCAGCATGTCACTGGCCAGGATCCTGAGCCTGC...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGGCAGGCTCAGGATCCTaGCCAGTGACATGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVAGSGS*PVTCWS
Trigger: TGACCAGCATGTCACTGGCCAGGATCCTGAGCCTGC...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGCCAAGAAGCACAGCATaGGGCCACAGCCGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVPRSTA*GHSRSC
Trigger: ACAAGAGCGGCTGTGGCCCCATGCTGTGCTTCTTGG...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp TTTAATGGTGGCACAGCCTGCGGTCTGGTTCCTCCATCAGGGCGCTGTGGGTATTGGAAGACGGATGGGTaGGTGGAAGGCTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: FNGGTACGLVPPSGRCGYWKTDG*VEGCAD
Trigger: ATCTGCACAGCCTTCCACCCACCCATCCGTCTTCCA...ATACCCACAGCGCCCTGATGGAGGAACCAGACCGCAGGCTGTGCCACCATTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GGCAGAAGCATGGGGGCTGACCCTCTGCCTGACATGGAGAGAGGACATTCAGAAAGTCCCATGAAACCTTaGCAGGCGCGAACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GRSMGADPLPDMERGHSESPMKP*QARTSR
Trigger: TCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACT...TTCTGAATGTCCTCTCTCCATGTCAGGCAGAGGGTCAGCCCCCATGCTTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACCGGGTTTACCAGCACTaGCACACTGCATATTTCATT +
Preference number: 4 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHRVYQH*HTAYFI
Trigger: AATGAAATATGCAGTGTGTCAGTGCTGGTAAACCCG...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGGTGTCACCAGCCCACTaGCCAGGATGTAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVVSPAH*PGCRSR
Trigger: ACGACTTCTACATCCTGGGCAGTGGGCTGGTGACAC...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAATATGGCTTAGGAAGGTCTTGGTGGTTAACAAGGCTCCCAAATAGGACCCAGTCTGGCTGGCCCATGTaGAGCAGGCCGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QYGLGRSWWLTRLPNRTQSGWPM*SRPLKG
Trigger: GCCCTTCAGCGGCCTGCTGCACATGGGCCAGCCAGA...CTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTGGGAGACGAGGGGACTaGTTCCTGAGGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCGRRGD*FLREQR
Trigger: CCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCC...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCGAACTTCGTAAGCCATaGTGTGGTATACAGACCAAT +
Preference number: 4 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPELRKP*CGIQTN
Trigger: ATTGGTCTGTATACCACAGCATGGCTTACGAAGTTC...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGATCCACCATAAGCAGCTaGCCCGCCGAGACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGSTISS*PAETSR
Trigger: CCTGGACGTCTCGGCGGGCCAGCTGCTTATGGTGGA...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGGGGCCTTCCCGGAACTaGAGCCAGTACTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVGPSRN*SQYFLM
Trigger: CATCAAGAAGTACTGGCTCCAGTTCCGGGAAGGCCC...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CAATATGGCTTAGGAAGGTCTTGGTGGTTAACAAGGCTCCCAAATAGGACCCAGCCGAGGCCAGGCGGTTaGCCACGATGTTGCGTACCC +
Preference number: 4 (lower is better)
Translates to: QYGLGRSWWLTRLPNRTQPRPGG*PRCCVP
Trigger: GGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGG...CTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTTTCCAGAGGTCTGGCTaGCCCATGTGCAGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCFQRSG*PMCSRP
Trigger: CGGCCTGCTGCACATGGGCCAGCCAGACCTCTGGAA...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTCCAGGGCCACCCGTaGGAATGCAGCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGLQGHP*ECSWEK
Trigger: CTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAG...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGATGGACAGATGGAGATaGCTGAATGGTTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQMDRWR*LNGWMG
Trigger: ACCCATCCAACCATTCAGCCATCTCCATCTGTCCAT...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGAACTTCAGTCCCATaGAACCTTGACAGGCGCGAA +
Preference number: 4 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLRTSVP*NLDRRE
Trigger: TTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCT...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR TCA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACTGGAAAATGGACAAATaGGGCCAGGTGCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KQTETESGRFRAGQKRRHWKMDK*GQVRGL
Trigger: GAGCCCCCGCACCTGGCCTCATTTGTCCATTTTCCA...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGGACTCCATCTCTTCCTaGATCCACTCTAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVDSISS*IHSRLA
Trigger: GGCCAACCTAGAGTGGATGCAGGAAGAGATGGAGTC...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACACCATGCCGGGGATCTaGTCCAGGATGGTAAGCACC +
Preference number: 4 (lower is better)
Translates to: KQTETESGRFRAGQKRRHTMPGI*SRMVST
Trigger: GGTGCTTACCATCCTGGAGCAGATCCCCGGCATGGT...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp CTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGCTTTGTTCCAGGTGTTGTaGGCAACCAGGAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: LSSLQAHSTGRVLSPRQALFQVL*ATRRSL
Trigger: GAGTGACCTCCTGGTTGCCCACAACACCTGGAACAA...AGCCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGTCTTGTTGCCAATGGTaGTCTCCAGTGTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVSCCQW*SPVSPA
Trigger: GGCTGGTGACACTGGAGACCACCATTGGCAACAAGA...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCGTAATCCAAGCACTTTaGGAGGCCAAGACGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCVIQAL*EAKTGG
Trigger: TCCGCCCGTCTTGGCCTCCCAAAGTGCTTGGATTAC...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp CAGAGAACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGAATGGAAATGAACAGATaGAAATGGTTGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: QRTKPPGGAGVRSPVALGMEMNR*KWLDGW
Trigger: CCACCCATCCAACCATTTCCATCTGTTCATTTCCAT...TCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGTTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGTGTACCTCATCAGCCTaGCCATGGAGTCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: CFPLSKHTALGESCLQGRCTSSA*PWSPCL
Trigger: AAGACATGGACTCCATGGTCAGGCTGATGAGGTACA...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGGTAGATGGATGGAAATaGACAGATGGAAATGGTTGG +
Preference number: 4 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQVDGWK*TDGNGW
Trigger: CCAACCATTTCCATCTGTTCATTTCCATCCATCTAC...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACCAAGGCAGGCTGCATaGGATCAGACAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGPRQAA*DQTGRE
Trigger: CTCTCTCCCTGTCTGATCTCATGCAGCCTGCCTTGG...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGTGTCACCAGCCCACTaGCCAGGATGTAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: KQTETESGRFRAGQKRRHVSPAH*PGCRSR
Trigger: ACGACTTCTACATCCTGGGCAGTGGGCTGGTGACAC...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp CAATATGGCTTAGGAAGGTCTTGGTGGTTAACAAGGCTCCCAAATAGGACCCAGTGGGGGCTGACCCTCTaGCTGACATGGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QYGLGRSWWLTRLPNRTQWGLTL*LTWRED
Trigger: GTCCTCTCTCCATGTCAGGCAGAGGGTCAGCCCCCA...CTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GGCAGAAGCATGGGGGCTGACCCTCTGCCTGACATGGAGAGAGGACATTCAGAAATACTTCCACAGGGCTaGGTTCTTGTTGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: GRSMGADPLPDMERGHSEILPQG*VLVANG
Trigger: ACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTAT...TTCTGAATGTCCTCTCTCCATGTCAGGCAGAGGGTCAGCCCCCATGCTTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp TGCTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGCCCTCCAGCCACAGATaGCCAGAAACTTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CFPLSKHTALGESCLQGRPSSHR*PETLVC
Trigger: ACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGG...CCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGAGGGGGTTGCAGGCTTTaGACAGTGACAGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGGGCRL*TVTEGH
Trigger: ATGACCCTCTGTCACTGTGCAAAGCCTGCAACCCCC...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGATGTCCTCAAGGAAGCTaGCCAGAAAGGGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGCPQGS*PERETR
Trigger: CCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACA...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR GCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTGTCTCCAAGGCAGGCTaGATGAGATCAGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCVSKAG*MRSDRE
Trigger: CTCCCTGTCTGATCTCATGCAGCCTGCCTTGGAGAC...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGAAGTCCCATGAAACCTTaGCAGGCGCGAACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGSPMKP*QARTSR
Trigger: TCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACT...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAAGAAAATGGACAGATaGAGATGGCTGAATGGTTGG +
Preference number: 4 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLKKMDR*RWLNGW
Trigger: CCAACCATTCAGCCATCTCCATCTGTCCATTTTCTT...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGCTGTATACCACAATATaGCTTAGGAAGGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLLYTTI*LRKVLV
Trigger: CACCAAGACCTTCCTAAGCCATATTGTGGTATACAG...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp CAATATGGCTTAGGAAGGTCTTGGTGGTTAACAAGGCTCCCAAATAGGACCCAGCATGTCTTGTACCAGTaGCTGGTTCCGCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: QYGLGRSWWLTRLPNRTQHVLYQ*LVPPED
Trigger: ATCTTCCGGCGGAACCAGTCACTGGTACAAGACATG...CTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGAAGTGAGCAGAGATTATaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGSEQRL*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCATAATCTCTGCTCACT...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR GCA 90 bp GGCAGAAGCATGGGGGCTGACCCTCTGCCTGACATGGAGAGAGGACATTCAGAATCACAAGAGCAGGAATaGTTCTGTCCCTTTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GRSMGADPLPDMERGHSESQEQE*FCPFCY
Trigger: ATAACAAAAGGGACAGAAGCATTCCTGCTCTTGTGA...TTCTGAATGTCCTCTCTCCATGTCAGGCAGAGGGTCAGCCCCCATGCTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GTTTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGACGGTATGTTGTAGCTaGCCCAGTAGGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VCFQVSVLKEAAQKGRRGTVCCS*PSRSSG
Trigger: ACCAGAAGACCTACTGGGCCAGCTACAACATACCGT...CCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp TTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACCCTCCAGCCACAGATaGCCAGAAACTTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: LFSSFCPQGSCPERETRGPSSHR*PETLVC
Trigger: ACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGG...TCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTGTAACCCCAGCTACTTaGGAAGCTAAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCVTPAT*EAKAGE
Trigger: TTCTCCTGCCTTAGCTTCCCAAGTAGCTGGGGTTAC...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCGATCTCATAGGTGGATaGATGAGTCAATGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCDLIGG*MSQWLD
Trigger: ATCCAGCCATTGACTCATCCATCCACCTATGAGATC...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTGGCTTAGGAAGGTCTTaGTGGTTAACAAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCGLGRS*WLTRLP
Trigger: TGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCC...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTAGTGACAGAGGGTCATaGAGGAAGTCATTGTACCTC +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCSDRGS*RKSLYL
Trigger: GAGGTACAATGACTTCCTCCATGACCCTCTGTCACT...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTGGAAGGCTGTGCAGATaGATGATGGGTGAGTATGTT +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCGRLCR*MMGEYV
Trigger: AACATACTCACCCATCATCCATCTGCACAGCCTTCC...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GGCAGAAGCATGGGGGCTGACCCTCTGCCTGACATGGAGAGAGGACATTCAGAAATGGAAATGTTTGGATaGGTGGATAAATGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRSMGADPLPDMERGHSEMEMFG*VDKWLE
Trigger: TTCCAACCATTTATCCACCCATCCAAACATTTCCAT...TTCTGAATGTCCTCTCTCCATGTCAGGCAGAGGGTCAGCCCCCATGCTTCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR TCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTCAGATGGATGATGGGTaGGTATGTTGGCAGATGAAT +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCQMDDG*VCWQMN
Trigger: ATTCATCTGCCAACATACTCACCCATCATCCATCTG...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGAAATGTTTGGATGGGTaGATAAATGGTTGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVKCLDG*INGWKD
Trigger: ATCCTTCCAACCATTTATCCACCCATCCAAACATTT...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACACAGATGAAAATGGTTaGATTGATGGTTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: KQTETESGRFRAGQKRRHTDENG*IDGWMG
Trigger: ACCCATCCAACCATCAATCCAACCATTTTCATCTGT...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTGGATGGAAAAACAGATaGAAATGTTTGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCGWKNR*KCLDGW
Trigger: CCACCCATCCAAACATTTCCATCTGTTTTTCCATCC...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp GAGAGGACATTCAGAACCCTCCAGCCACAGATGGCCAGAAACTTTGGTTTGTGTTTAGGAAGGTCTTGGTaGTTAACAAGGCTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ERTFRTLQPQMARNFGLCLGRSW*LTRLPN
Trigger: ATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAA...ACACAAACCAAAGTTTCTGGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CCA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACATGAACAGATGGAAATaGTTGGATGGGTGGATAAAT +
Preference number: 4 (lower is better)
Translates to: KQTETESGRFRAGQKRRHMNRWK*LDGWIN
Trigger: ATTTATCCACCCATCCAACCATTTCCATCTGTTCAT...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS CCA 90 bp AGCAGGCCGCTGAAGGGCGAGGTGCTCCACTGGAACGGGGGCACCTaGTCCCACGTGGGACCGCTGGCCGCCAGCAGGCTCAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: SRPLKGEVLHWNGGT*SHVGPLAASRLRIL
Trigger: CAGGATCCTGAGCCTGCTGGCGGCCAGCGGTCCCACGTGGGACCAGGTGCCCCCGTTCCAGTGGAGCACCTCGCCCTTCAGCGGCCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 90 bp TGCCCAGCTCCAGGAAGGCCCACCCAGTCTCGCGGATGGCGTTGGTaGGGTTGGCCCAGGCCACGGCGTCAGGGTGGCGTCCGTCCACCA +
Preference number: 5 (lower is better)
Translates to: CPAPGRPTQSRGWRW*GWPRPRRQGGVRPP
Trigger: TGGTGGACGGACGCCACCCTGACGCCGTGGCCTGGGCCAACCTCACCAACGCCATCCGCGAGACTGGGTGGGCCTTCCTGGAGCTGGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 90 bp TCGCGGATGGCGTTGGTGAGGTTGGCCCAGGCCACGGCGTCAGGGTaGCGTCCGTCCACCATAAGCAGCTGGCCCGCCGAGACGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SRMALVRLAQATASG*RPSTISSWPAETSR
Trigger: CCTGGACGTCTCGGCGGGCCAGCTGCTTATGGTGGACGGACGCCACCCTGACGCCGTGGCCTGGGCCAACCTCACCAACGCCATCCGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280800.5
ENST00000545182.6
ENST00000548997.1
CDS GCA 90 bp CTGCCCAGGTGGCCCCATCCGAGGCCAGGCGGTTGGCCACGATGTTaGGTACCCACTCCAGCACACAGCCCCTGGGCCGCACATACTTCC +
Preference number: 5 (lower is better)
Translates to: LPRWPHPRPGGWPRC*VPTPAHSPWAAHTS
Trigger: GGAAGTATGTGCGGCCCAGGGGCTGTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGAGCCATTGGCCGGGTaGAGGTCGGAGCGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWEPLAG*RSERAE
Trigger: CTCCGCCCGCTCCGACCTCAACCCGGCCAATGGCTC...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGAGCCATTGGCCGGGTaGAGGTCGGAGCGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PERETRGLLPEGAEGPELEPLAG*RSERAE
Trigger: CTCCGCCCGCTCCGACCTCAACCCGGCCAATGGCTC...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCGTCTCGCGGATGGCGTaGGTGAGGTTGGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPVSRMA*VRLAQA
Trigger: GGCCTGGGCCAACCTCACCAACGCCATCCGCGAGAC...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 90 bp GAAACCTTGACAGGCGCGAACTTCCAGAGGTCTGGCTGGCCCATGTaGAGCAGGCCGCTGAAGGGCGAGGTGCTCCACTGGAACGGGGGC +
Preference number: 5 (lower is better)
Translates to: ETLTGANFQRSGWPM*SRPLKGEVLHWNGG
Trigger: GCCCCCGTTCCAGTGGAGCACCTCGCCCTTCAGCGGCCTGCTGCACATGGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGACGGTTGGCCACGATGTaGCGTACCCACTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRRLATM*RTHSST
Trigger: TGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCG...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACTCCGAGGCCAGGCGGTaGGCCACGATGTTGCGTACC +
Preference number: 5 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHSEARR*ATMLRT
Trigger: GGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGA...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 90 bp CACCACCACCATGCCGGTGCCGCTGTTGAACCTCTTGAAGATGTCTaGCCAGGTGGCCCCATCCGAGGCCAGGCGGTTGGCCACGATGTT +
Preference number: 5 (lower is better)
Translates to: HHHHAGAAVEPLEDV*PGGPIRGQAVGHDV
Trigger: AACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGGCACCGGCATGGTGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS CCA 90 bp CAGTCCCATGAAACCTTGACAGGCGCGAACTTCCAGAGGTCTGGCTaGCCCATGTGCAGCAGGCCGCTGAAGGGCGAGGTGCTCCACTGG +
Preference number: 5 (lower is better)
Translates to: QSHETLTGANFQRSG*PMCSRPLKGEVLHW
Trigger: CCAGTGGAGCACCTCGCCCTTCAGCGGCCTGCTGCACATGGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGAGGGTCAGCCGCACCTGGTGCCAGTAAGGTGAGTCTGGGTTTGACTCCATCTGTCTCGCGGATGGCGTaGGTGAGGTTGGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GGSAAPGASKVSLGLTPSVSRMA*VRLAQA
Trigger: GGCCTGGGCCAACCTCACCAACGCCATCCGCGAGAC...AGATGGAGTCAAACCCAGACTCACCTTACTGGCACCAGGTGCGGCTGACCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CAA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGTCCGAGGCCAGGCGGTaGGCCACGATGTTGCGTACC +
Preference number: 5 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQSEARR*ATMLRT
Trigger: GGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGA...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp ACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACGGGGGCCGCTGTTGAACCTCTaGAAGATGTCTGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TKPPGGAGVRSPVALGRGPLLNL*KMSAQV
Trigger: CACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGG...CCCCCGTCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 90 bp CACCGGCTGCATAGGCCTGCAAGCTGTCATTGTATTGGCCACTTGTaGCCAGCTCCAGGAAGGCCCACCCAGTCTCGCGGATGGCGTTGG +
Preference number: 5 (lower is better)
Translates to: HRLHRPASCHCIGHL*PAPGRPTQSRGWRW
Trigger: CCAACGCCATCCGCGAGACTGGGTGGGCCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATGACAGCTTGCAGGCCTATGCAGCCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 90 bp CCAGCCCACTGCCCAGGATGTAGAAGTCGTCGCAGGAGAAGATGGTaGCGGGGTAGGAGGAGAAGACCAGCTTGTTGCCGGGAACCAGCG +
Preference number: 5 (lower is better)
Translates to: PAHCPGCRSRRRRRW*RGRRRRPACCREPA
Trigger: CGCTGGTTCCCGGCAACAAGCTGGTCTTCTCCTCCTACCCCGGCACCATCTTCTCCTGCGACGACTTCTACATCCTGGGCAGTGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 90 bp GGCGGTTGGCCACGATGTTGCGTACCCACTCCAGCACACAGCCCCTaGGCCGCACATACTTCCACAGGGCTGGGTTCTTGTTGCCAATGG +
Preference number: 5 (lower is better)
Translates to: GGWPRCCVPTPAHSP*AAHTSTGLGSCCQW
Trigger: CCATTGGCAACAAGAACCCAGCCCTGTGGAAGTATGTGCGGCCCAGGGGCTGTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCCGGTTGGCCACGATGTaGCGTACCCACTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSRLATM*RTHSST
Trigger: TGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCG...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCCCATTGGGCTGGGGGTaGCAGGCTTTGCACAGTGAC +
Preference number: 5 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSPLGWG*QALHSD
Trigger: GTCACTGTGCAAAGCCTGCAACCCCCAGCCCAATGG...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCCCATTGGGCTGGGGGTaGCAGGCTTTGCACAGTGAC +
Preference number: 5 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRAPLGWG*QALHSD
Trigger: GTCACTGTGCAAAGCCTGCAACCCCCAGCCCAATGG...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGAGAGCACTGGGAGAGTCTaGTCTCCAAGGCAGGCTGCA +
Preference number: 5 (lower is better)
Translates to: KGRRGDCFLREQRGQSWESTGRV*SPRQAA
Trigger: TGCAGCCTGCCTTGGAGACAAGACTCTCCCAGTGCT...CTCCCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS GCA 90 bp CACAGCCCCTGGGCCGCACATACTTCCACAGGGCTGGGTTCTTGTTaGCAATGGTGGTCTCCAGTGTCACCAGCCCACTGCCCAGGATGT +
Preference number: 5 (lower is better)
Translates to: HSPWAAHTSTGLGSC*QWWSPVSPAHCPGC
Trigger: ACATCCTGGGCAGTGGGCTGGTGACACTGGAGACCACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTATGTGCGGCCCAGGGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 90 bp CCACTCCAGCACACAGCCCCTGGGCCGCACATACTTCCACAGGGCTaGGTTCTTGTTGCCAATGGTGGTCTCCAGTGTCACCAGCCCACT +
Preference number: 5 (lower is better)
Translates to: PLQHTAPGPHILPQG*VLVANGGLQCHQPT
Trigger: AGTGGGCTGGTGACACTGGAGACCACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTATGTGCGGCCCAGGGGCTGTGTGCTGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 90 bp GGGTTGAGGTCGGAGCGGGCGGAGATAGCATTCTCCCCATTGGGCTaGGGGTTGCAGGCTTTGCACAGTGACAGAGGGTCATGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GLRSERAEIAFSPLG*GLQALHSDRGSWRK
Trigger: CTTCCTCCATGACCCTCTGTCACTGTGCAAAGCCTGCAACCCCCAGCCCAATGGGGAGAATGCTATCTCCGCCCGCTCCGACCTCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGGAGGGTTTGATCTTGGTCTaGTTCAGGGCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KGRRGDCFLREQRGQSWEGLILV*FRASSR
Trigger: CCTGGAGCTGGCCCTGAACAAGACCAAGATCAAACC...CTCCCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGAGGGCTGGGTTCTTGTaGCCAATGGTGGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PERETRGLLPEGAEGPELRAGFL*PMVVSS
Trigger: ACTGGAGACCACCATTGGCAACAAGAACCCAGCCCT...CAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGCCTTGGGACGGGGGTGACCCTGACGAGGGTCAGCAGGGGCGAAAGCAGCAGATCATGGAGGAAGTCATaGTACCTCATCAGCCTGACC +
Preference number: 5 (lower is better)
Translates to: GLGTGVTLTRVSRGESSRSWRKS*YLISLT
Trigger: GGTCAGGCTGATGAGGTACAATGACTTCCTCCATGA...TCTGCTGCTTTCGCCCCTGCTGACCCTCGTCAGGGTCACCCCCGTCCCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCATAGCATTCTCCCCATaGGGCTGGGGGTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSIAFSP*GWGLQA
Trigger: AGCCTGCAACCCCCAGCCCAATGGGGAGAATGCTAT...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 90 bp TCACCAGCCCACTGCCCAGGATGTAGAAGTCGTCGCAGGAGAAGATaGTGCCGGGGTAGGAGGAGAAGACCAGCTTGTTGCCGGGAACCA +
Preference number: 5 (lower is better)
Translates to: SPAHCPGCRSRRRRR*CRGRRRRPACCREP
Trigger: TGGTTCCCGGCAACAAGCTGGTCTTCTCCTCCTACCCCGGCACCATCTTCTCCTGCGACGACTTCTACATCCTGGGCAGTGGGCTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCCATTGTATTGGCCACTaGTGCCCAGCTCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GAMPAEDNAQTKLTSSRAHCIGH*CPAPGR
Trigger: CCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATG...GGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGGGCCAGAGCTGGCAAGCTGTCATTGTATaGGCCACTTGTGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QKGRRGDCFLREQRGQSWQAVIV*ATCAQL
Trigger: GAGCTGGGCACAAGTGGCCAATACAATGACAGCTTG...CCAGCTCTGGCCCCTCTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGAGCCCCAGAGTCTGCCCCAGGACCTTCCCAAACCCTCAGGAAGGAGAAGCACTGCATCCACTCTAGGTaGGCCTCCAGGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GAPESAPGPSQTLRKEKHCIHSR*ASRKLF
Trigger: GAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGCA...GTGCTTCTCCTTCCTGAGGGTTTGGGAAGGTCCTGGGGCAGACTCTGGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCGGTTTGATCTTGGTCTaGTTCAGGGCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSGLILV*FRASSR
Trigger: CCTGGAGCTGGCCCTGAACAAGACCAAGATCAAACC...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp GGAGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCTGGAGCCAGTACTTCTaGATGACACGCAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: GEGCWNRLLPPHGSPRVCWSQYF*MTRSMC
Trigger: GCACATGCTGCGTGTCATCAAGAAGTACTGGCTCCA...GCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp TTTAATGGTGGCACAGCCTGCGGTCTGGTTCCTCCATCAGGGCGCTGTGGGTATGAGGAGAAGACCAGCTaGTTGCCGGGAACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: FNGGTACGLVPPSGRCGYEEKTS*LPGTSG
Trigger: CCCGCTGGTTCCCGGCAACAAGCTGGTCTTCTCCTC...ATACCCACAGCGCCCTGATGGAGGAACCAGACCGCAGGCTGTGCCACCATTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGGAGGAGAAGACCAGCTaGTTGCCGGGAACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLEEKTS*LPGTSG
Trigger: CCCGCTGGTTCCCGGCAACAAGCTGGTCTTCTCCTC...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCAGGGCTGGGTTCTTGTaGCCAATGGTGGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSRAGFL*PMVVSS
Trigger: ACTGGAGACCACCATTGGCAACAAGAACCCAGCCCT...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGCAGCCCACTGGCATaGAACACAGTCTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RQRPDKAHQLQGHPWECSCSPLA*NTVSKD
Trigger: GTCCTTCGAGACTGTGTTCAATGCCAGTGGGCTGCA...GCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCATGCCGGTGCCGCTGTaGAACCTCTTGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPMPVPL*NLLKMS
Trigger: AGACATCTTCAAGAGGTTCAACAGCGGCACCGGCAT...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS TCA 90 bp CAGCAGGGGCGAAAGCAGCAGAGCAGGGACAGAACTTCAGTCCCATaGAACCTTGACAGGCGCGAACTTCCAGAGGTCTGGCTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: QQGRKQQSRDRTSVP*NLDRRELPEVWLAH
Trigger: ATGGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCTGTCCCTGCTCTGCTGCTTTCGCCCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 90 bp CCACTGGTTGTTATACGTGCCGCTGTTGAACCTCTTGAAGATGTCTaGCCAGGTGGCCCCATCCGAGGCCAGGCGGTTGGCCACGATGTT +
Preference number: 5 (lower is better)
Translates to: PLVVIRAAVEPLEDV*PGGPIRGQAVGHDV
Trigger: AACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGGCACGTATAACAACCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTGCATCCACTCTAGGTaGGCCTCCAGGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSCIHSR*ASRKLF
Trigger: GAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGCA...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGAAGGGTGCTGGAACAGGCTCCTTCCACCCCATGGGAGCCCCAGAGTCTGCCCACGATCATCCACTGGTaGTTATACGTGCCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RRVLEQAPSTPWEPQSLPTIIHW*LYVPLL
Trigger: CAACAGCGGCACGTATAACAACCAGTGGATGATCGT...GGGCAGACTCTGGGGCTCCCATGGGGTGGAAGGAGCCTGTTCCAGCACCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp GAGCTGGGAGGAGCAATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCCAGTCCCATGAAACCTaGACAGGCGCGAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: ELGGAMPAEDNAQTKLTSQSHET*TGANFQ
Trigger: CTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTG...GCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATTGCTCCTCCCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 90 bp ATTGTACCTCATCAGCCTGACCATGGAGTCCATGTCTTGTACCAGTaGCTGGTTCCGCCGGAAGATCTGGGCCCGGGGGCTCCCGTCATA +
Preference number: 5 (lower is better)
Translates to: IVPHQPDHGVHVLYQ*LVPPEDLGPGAPVI
Trigger: TATGACGGGAGCCCCCGGGCCCAGATCTTCCGGCGGAACCAGTCACTGGTACAAGACATGGACTCCATGGTCAGGCTGATGAGGTACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 90 bp GCGAAAGCAGCAGAGCAGGGACAGAACTTCAGTCCCATGAAACCTTaGCAGGCGCGAACTTCCAGAGGTCTGGCTGGCCCATGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: AKAAEQGQNFSPMKP*QARTSRGLAGPCAA
Trigger: TGCTGCACATGGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCTGTCCCTGCTCTGCTGCTTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 90 bp CATGTAGATGAGCTCCTCCGACACAGCAGCCTCCACCACACCGGCTaGATAGGCCTGCAAGCTGTCATTGTATTGGCCACTTGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HVDELLRHSSLHHTG*IGLQAVIVLATCAQ
Trigger: CTGGGCACAAGTGGCCAATACAATGACAGCTTGCAGGCCTATGCAGCCGGTGTGGTGGAGGCTGCTGTGTCGGAGGAGCTCATCTACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGGAACCCCAAGGGTTaGATGGTGAACTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQRNPKG*MVNFPA
Trigger: AGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCT...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AATGCCAGCCGAAGACAACGCCCAGACAAAGCTCACCAGCTCCAGGGCCACCCGAGAGAAGGTTTGATCTaGGTCTTGTTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NASRRQRPDKAHQLQGHPREGLI*VLFRAS
Trigger: GCTGGCCCTGAACAAGACCAAGATCAAACCTTCTCT...CGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTGGGCGTTGTCTTCGGCTGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CAGACAAAGCTCACCAGCTCCAGGGCCACCCGTGGGAATGCAGCTGGGAGAAGGTCATGGAGGAAGTCATaGTACCTCATCAGCCTGACC +
Preference number: 5 (lower is better)
Translates to: QTKLTSSRATRGNAAGRRSWRKS*YLISLT
Trigger: GGTCAGGCTGATGAGGTACAATGACTTCCTCCATGA...CCTTCTCCCAGCTGCATTCCCACGGGTGGCCCTGGAGCTGGTGAGCTTTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CTTTCCTCTCTCCAAGCACACAGCACTGGGAGAGTCTTGTCTCCAAGGCAGGCTGGGCCACAGCCGCTCTaGTTTAATGGTGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LSSLQAHSTGRVLSPRQAGPQPL*FNGGTA
Trigger: GGCTGTGCCACCATTAAACAAGAGCGGCTGTGGCCC...AGCCTGCCTTGGAGACAAGACTCTCCCAGTGCTGTGTGCTTGGAGAGAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp ACAGGAGGCTGCATGGGGGATGGCGCAGAACCCAAACCTGAGAGGAGAAAAAGCCATTGTATTGGCCACTaGTGCCCAGCTCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TGGCMGDGAEPKPERRKSHCIGH*CPAPGR
Trigger: CCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATG...GCTTTTTCTCCTCTCAGGTTTGGGTTCTGCGCCATCCCCCATGCAGCCTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp ACAGGAGGCTGCATGGGGGATGGCGCAGAACCCAAACCTGAGAGGAGAAAAAGCGCCTGCAAGCTGTCATaGTATTGGCCACTTGTGCCC +
Preference number: 5 (lower is better)
Translates to: TGGCMGDGAEPKPERRKSACKLS*YWPLVP
Trigger: GGGCACAAGTGGCCAATACAATGACAGCTTGCAGGC...GCTTTTTCTCCTCTCAGGTTTGGGTTCTGCGCCATCCCCCATGCAGCCTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp AGGAGGAACCCCAAGGGTTTGATGGTGAACTTCCCAGCTGGGAAGCTCACACGGTGCATCCACTCTAGGTaGGCCTCCAGGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RRNPKGLMVNFPAGKLTRCIHSR*ASRKLF
Trigger: GAAGAGCTTCCTGGAGGCCAACCTAGAGTGGATGCA...CCGTGTGAGCTTCCCAGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CAA 90 bp AGGAGGAACCCCAAGGGTTTGATGGTGAACTTCCCAGCTGGGAAGCTCACACGGGGTTTGATCTTGGTCTaGTTCAGGGCCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RRNPKGLMVNFPAGKLTRGLILV*FRASSR
Trigger: CCTGGAGCTGGCCCTGAACAAGACCAAGATCAAACC...CCGTGTGAGCTTCCCAGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CAA 90 bp ACGAAGCCCCCAGGAGGGGCTGGAGTTAGAAGTCCGGTGGCCTTGGGACGGGGGAACAGATGGAAATGTTaGGATGGGTGGATAAATGGT +
Preference number: 5 (lower is better)
Translates to: TKPPGGAGVRSPVALGRGNRWKC*DGWING
Trigger: ACCATTTATCCACCCATCCAAACATTTCCATCTGTT...CCCCCGTCCCAAGGCCACCGGACTTCTAACTCCAGCCCCTCCTGGGGGCTTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGGCCTGCAAGCTGTCATaGTATTGGCCACTTGTGCCC +
Preference number: 5 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVACKLS*YWPLVP
Trigger: GGGCACAAGTGGCCAATACAATGACAGCTTGCAGGC...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCCACAGGGCTGGGTTCTaGTTGCCAATGGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCHRAGF*LPMVVS
Trigger: GGAGACCACCATTGGCAACAAGAACCCAGCCCTGTG...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGCAGTCCCATGAAACCTaGACAGGCGCGAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVQSHET*TGANFQ
Trigger: CTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTG...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 90 bp GATAGCATTCTCCCCATTGGGCTGGGGGTTGCAGGCTTTGCACAGTaGCAGAGGGTCATGGAGGAAGTCATTGTACCTCATCAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: DSILPIGLGVAGFAQ*QRVMEEVIVPHQPD
Trigger: GTCAGGCTGATGAGGTACAATGACTTCCTCCATGACCCTCTGTCACTGTGCAAAGCCTGCAACCCCCAGCCCAATGGGGAGAATGCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AGGTTTGATCTTGGTCTTGTTCAGGGCCAGCTCCAGGTCTTCCAGGTCCCCAGAAGGAACCCCAAGGGTTaGATGGTGAACTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: RFDLGLVQGQLQVFQVPRRNPKG*MVNFPA
Trigger: AGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCT...TCTGGGGACCTGGAAGACCTGGAGCTGGCCCTGAACAAGACCAAGATCAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548997.1
CDS-3UTR CAA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACCACAGGGCTGGGTTCTaGTTGCCAATGGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: KQTETESGRFRAGQKRRHHRAGF*LPMVVS
Trigger: GGAGACCACCATTGGCAACAAGAACCCAGCCCTGTG...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp TTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCCCGCTGTTGAACCTCTaGAAGATGTCTGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FQVSVLKEAAQKGRRGDCPLLNL*KMSAQV
Trigger: CACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGG...GCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACATAGCATTCTCCCCATaGGGCTGGGGGTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: KQTETESGRFRAGQKRRHIAFSP*GWGLQA
Trigger: AGCCTGCAACCCCCAGCCCAATGGGGAGAATGCTAT...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 90 bp AACCAAAATGAACTCTTGGAATATCCCTGCAGTGACTCCGTGTGTTaGGAGGGTTTCCAAGGCCCAAACCTCCTAGGACCACTCCCCACG +
Preference number: 5 (lower is better)
Translates to: NQNELLEYPCSDSVC*EGFQGPNLLGPLPT
Trigger: CGTGGGGAGTGGTCCTAGGAGGTTTGGGCCTTGGAAACCCTCCCAACACACGGAGTCACTGCAGGGATATTCCAAGAGTTCATTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547163.1
CDS-3UTR CAA 90 bp AGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACGGTGAGAGAAGGTTTGATCTaGGTCTTGTTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RQKQRVGDLGQGRRDATVREGLI*VLFRAS
Trigger: GCTGGCCCTGAACAAGACCAAGATCAAACCTTCTCT...CACCGTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 90 bp CCTCCTCACCAGCTCCTGGTCCCATCAAGTTTTTACATTTGGCCATaGAGGAGGTACTGCAAACATTTGGCAGTGGTATCCCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PPHQLLVPSSFYIWP*RRYCKHLAVVSLGL
Trigger: CAGCCCCAGGGATACCACTGCCAAATGTTTGCAGTACCTCCTTCATGGCCAAATGTAAAAACTTGATGGGACCAGGAGCTGGTGAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547163.1
CDS-3UTR CAA 90 bp AAACAGACAGAAACAGAGAGTGGGAGATTTAGGGCAGGGCAGAAGAGACGCCACAGGAACCCCAAGGGTTaGATGGTGAACTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KQTETESGRFRAGQKRRHRNPKG*MVNFPA
Trigger: AGCTGGGAAGTTCACCATCAAACCCTTGGGGTTCCT...GTGGCGTCTCTTCTGCCCTGCCCTAAATCTCCCACTCTCTGTTTCTGTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp ACAGGAGGCTGCATGGGGGATGGCGCAGAACCCAAACCTGAGAGGAGAAAAAGCTTATACGTGCCGCTGTaGAACCTCTTGAAGATGTCT +
Preference number: 5 (lower is better)
Translates to: TGGCMGDGAEPKPERRKSLYVPL*NLLKMS
Trigger: AGACATCTTCAAGAGGTTCAACAGCGGCACGTATAA...GCTTTTTCTCCTCTCAGGTTTGGGTTCTGCGCCATCCCCCATGCAGCCTCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp GTTTGTTTTCAAGTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGTGGAGCCAGTACTTCTaGATGACACGCAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: VCFQVSVLKEAAQKGRRGWSQYF*MTRSMC
Trigger: GCACATGCTGCGTGTCATCAAGAAGTACTGGCTCCA...CCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAACTTGAAAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CAATATGGCTTAGGAAGGTCTTGGTGGTTAACAAGGCTCCCAAATAGGACCCAGTGCAGCCCACTGGCATaGAACACAGTCTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: QYGLGRSWWLTRLPNRTQCSPLA*NTVSKD
Trigger: GTCCTTCGAGACTGTGTTCAATGCCAGTGGGCTGCA...CTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp CTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGGGAGCAGAGATGGCCAGAAACTTaGGTTTGTGTTTGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: LKEAAQKGRRGDCFLREQRWPET*VCVCFQ
Trigger: TTGAAAACAAACACAAACCAAAGTTTCTGGCCATCT...CTGCTCCCTCAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CAATATGGCTTAGGAAGGTCTTGGTGGTTAACAAGGCTCCCAAATAGGACCCAGTGGCTTAGGAAGGTCTaGGTGGTTAACAAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: QYGLGRSWWLTRLPNRTQWLRKV*VVNKAP
Trigger: GGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCA...CTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS-3UTR CAA 90 bp GTTTCTGTCCTCAAGGAAGCTGCCCAGAAAGGGAGACGAGGGGACTGCTTCCTGAGATGGCCAGAAACTTaGGTTTGTGTTTGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: VSVLKEAAQKGRRGDCFLRWPET*VCVCFQ
Trigger: TTGAAAACAAACACAAACCAAAGTTTCTGGCCATCT...CAGGAAGCAGTCCCCTCGTCTCCCTTTCTGGGCAGCTTCCTTGAGGACAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS-3UTR CAA 90 bp CAATATGGCTTAGGAAGGTCTTGGTGGTTAACAAGGCTCCCAAATAGGACCCAGGAGGTGGAGACAGAATaGAAACCCAGGTCTCTGACT +
Preference number: 5 (lower is better)
Translates to: QYGLGRSWWLTRLPNRTQEVETE*KPRSLT
Trigger: AGTCAGAGACCTGGGTTTCAATTCTGTCTCCACCTC...CTGGGTCCTATTTGGGAGCCTTGTTAACCACCAAGACCTTCCTAAGCCATATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS GCA 72 bp GCTGGCCCGCCGAGACGTCCAGGAGCACCGAGCGGCTaGGGGAGGCTGGAGGGACCTGCCCATCGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: AGPPRRPGAPSG*GRLEGPAHRAP
Trigger: GGGCGCGCGATGGGCAGGTCCCTCCAGCCTCCCGCAGCCGCTCGGTGCTCCTGGACGTCTCGGCGGGCCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp CGAGACGTCCAGGAGCACCGAGCGGCTGCGGGAGGCTaGAGGGACCTGCCCATCGCGCGCCCAGCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: RDVQEHRAAAGG*RDLPIARPAAP
Trigger: GGGGGCCGCTGGGCGCGCGATGGGCAGGTCCCTCCAGCCTCCCGCAGCCGCTCGGTGCTCCTGGACGTCTCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp ACGGCGTCAGGGTGGCGTCCGTCCACCATAAGCAGCTaGCCCGCCGAGACGTCCAGGAGCACCGAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: TASGWRPSTISS*PAETSRSTERL
Trigger: CAGCCGCTCGGTGCTCCTGGACGTCTCGGCGGGCCAGCTGCTTATGGTGGACGGACGCCACCCTGACGCCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280800.5
ENST00000545182.6
ENST00000548997.1
CDS CCA 72 bp GCGTTGGTGAGGTTGGCCCAGGCCACGGCGTCAGGGTaGCGTCCGTCCACCATAAGCAGCTGGCCCGCCGAG +
Preference number: 6 (lower is better)
Translates to: ALVRLAQATASG*RPSTISSWPAE
Trigger: CTCGGCGGGCCAGCTGCTTATGGTGGACGGACGCCACCCTGACGCCGTGGCCTGGGCCAACCTCACCAACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280800.5
ENST00000545182.6
ENST00000548997.1
CDS TCA 72 bp GGTGGCTGCCGGGGTAGCAGTACATCTGGCCCACCATaGCCGCACAATGCTGCGCCCCGCAGCCCGGGTCAC +
Preference number: 6 (lower is better)
Translates to: GGCRGSSTSGPP*PHNAAPRSPGH
Trigger: GTGACCCGGGCTGCGGGGCGCAGCATTGTGCGGTCATGGTGGGCCAGATGTACTGCTACCCCGGCAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS GCA 72 bp TGGCCCCATCCGAGGCCAGGCGGTTGGCCACGATGTTaGGTACCCACTCCAGCACACAGCCCCTGGGCCGCA +
Preference number: 6 (lower is better)
Translates to: WPHPRPGGWPRC*VPTPAHSPWAA
Trigger: TGCGGCCCAGGGGCTGTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp ATGTGCAGCAGGCCGCTGAAGGGCGAGGTGCTCCACTaGAACGGGGGCACCTGGTCCCACGTGGGACCGCTG +
Preference number: 6 (lower is better)
Translates to: MCSRPLKGEVLH*NGGTWSHVGPL
Trigger: CAGCGGTCCCACGTGGGACCAGGTGCCCCCGTTCCAGTGGAGCACCTCGCCCTTCAGCGGCCTGCTGCACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp TCTGCCCAGGTGGCCCCATCCGAGGCCAGGCGGTTGGCCACGATGTaGCGTACCCACTCCAGCACACAGCCCCTGGGCCGCACATACTTC +
Preference number: 6 (lower is better)
Translates to: SAQVAPSEARRLATM*RTHSSTQPLGRTYF
Trigger: GAAGTATGTGCGGCCCAGGGGCTGTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp TGTCTGCCCAGGTGGCCCCATCCGAGGCCAGGCGGTTaGCCACGATGTTGCGTACCCACTCCAGCACACAGC +
Preference number: 6 (lower is better)
Translates to: CLPRWPHPRPGG*PRCCVPTPAHS
Trigger: GCTGTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp CTCTTGAAGATGTCTGCCCAGGTGGCCCCATCCGAGGCCAGGCGGTaGGCCACGATGTTGCGTACCCACTCCAGCACACAGCCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: LLKMSAQVAPSEARR*ATMLRTHSSTQPLG
Trigger: GCCCAGGGGCTGTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGACATCTTCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 72 bp CATGCCGGTGCCGCTGTTGAACCTCTTGAAGATGTCTaGCCAGGTGGCCCCATCCGAGGCCAGGCGGTTGGC +
Preference number: 6 (lower is better)
Translates to: HAGAAVEPLEDV*PGGPIRGQAVG
Trigger: GCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGGCACCGGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS CAA 72 bp ATGTCTGCCCAGGTGGCCCCATCCGAGGCCAGGCGGTaGGCCACGATGTTGCGTACCCACTCCAGCACACAG +
Preference number: 6 (lower is better)
Translates to: MSAQVAPSEARR*ATMLRTHSSTQ
Trigger: CTGTGTGCTGGAGTGGGTACGCAACATCGTGGCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 72 bp GCCACCACCACCATGCCGGTGCCGCTGTTGAACCTCTaGAAGATGTCTGCCCAGGTGGCCCCATCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: ATTTMPVPLLNL*KMSAQVAPSEA
Trigger: GGCCTCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGGCACCGGCATGGTGGTGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545182.6
CDS CCA 72 bp AGCCTGACCATGGAGTCCATGTCTTGTACCAGTGACTaGTTCCGCCGGAAGATCTGGGCCCGGGGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SLTMESMSCTSD*FRRKIWARGLP
Trigger: CGGGAGCCCCCGGGCCCAGATCTTCCGGCGGAACCAGTCACTGGTACAAGACATGGACTCCATGGTCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp GAAACCTTGACAGGCGCGAACTTCCAGAGGTCTGGCTaGCCCATGTGCAGCAGGCCGCTGAAGGGCGAGGTG +
Preference number: 6 (lower is better)
Translates to: ETLTGANFQRSG*PMCSRPLKGEV
Trigger: CACCTCGCCCTTCAGCGGCCTGCTGCACATGGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp CCACACCGGCTGCATAGGCCTGCAAGCTGTCATTGTATTGGCCACTaGTGCCCAGCTCCAGGAAGGCCCACCCAGTCTCGCGGATGGCGT +
Preference number: 6 (lower is better)
Translates to: PHRLHRPASCHCIGH*CPAPGRPTQSRGWR
Trigger: ACGCCATCCGCGAGACTGGGTGGGCCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATGACAGCTTGCAGGCCTATGCAGCCGGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp AGCCTCCACCACACCGGCTGCATAGGCCTGCAAGCTGTCATTGTATaGGCCACTTGTGCCCAGCTCCAGGAAGGCCCACCCAGTCTCGCG +
Preference number: 6 (lower is better)
Translates to: SLHHTGCIGLQAVIV*ATCAQLQEGPPSLA
Trigger: CGCGAGACTGGGTGGGCCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATGACAGCTTGCAGGCCTATGCAGCCGGTGTGGTGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp AGCACACAGCCCCTGGGCCGCACATACTTCCACAGGGCTGGGTTCTaGTTGCCAATGGTGGTCTCCAGTGTCACCAGCCCACTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: STQPLGRTYFHRAGF*LPMVVSSVTSPLPR
Trigger: CCTGGGCAGTGGGCTGGTGACACTGGAGACCACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTATGTGCGGCCCAGGGGCTGTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp ACACAGCCCCTGGGCCGCACATACTTCCACAGGGCTGGGTTCTTGTaGCCAATGGTGGTCTCCAGTGTCACCAGCCCACTGCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: TQPLGRTYFHRAGFL*PMVVSSVTSPLPRM
Trigger: CATCCTGGGCAGTGGGCTGGTGACACTGGAGACCACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTATGTGCGGCCCAGGGGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 72 bp CATCAGCCTGACCATGGAGTCCATGTCTTGTACCAGTaGCTGGTTCCGCCGGAAGATCTGGGCCCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: HQPDHGVHVLYQ*LVPPEDLGPGA
Trigger: AGCCCCCGGGCCCAGATCTTCCGGCGGAACCAGTCACTGGTACAAGACATGGACTCCATGGTCAGGCTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 72 bp GTTATACGTGCCGCTGTTGAACCTCTTGAAGATGTCTaGCCAGGTGGCCCCATCCGAGGCCAGGCGGTTGGC +
Preference number: 6 (lower is better)
Translates to: VIRAAVEPLEDV*PGGPIRGQAVG
Trigger: GCCAACCGCCTGGCCTCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGGCACGTATAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS CCA 72 bp ACCCACACCCACCTACCCCAGGGGCCTTCCCGGAACTaGAGCCAGTACTTCTTGATGACACGCAGCATGTGC +
Preference number: 6 (lower is better)
Translates to: THTHLPQGPSRN*SQYFLMTRSMC
Trigger: GCACATGCTGCGTGTCATCAAGAAGTACTGGCTCCAGTTCCGGGAAGGCCCCTGGGGTAGGTGGGTGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547163.1
CDS CAA 72 bp CACACCGGCTGCATAGGCCTGCAAGCTGTCATTGTATaGGCCACTTGTGCCCAGCTCCAGGAAGGCCCACCC +
Preference number: 6 (lower is better)
Translates to: HTGCIGLQAVIV*ATCAQLQEGPP
Trigger: GGGTGGGCCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATGACAGCTTGCAGGCCTATGCAGCCGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 72 bp CCCCTGGGCCGCACATACTTCCACAGGGCTGGGTTCTaGTTGCCAATGGTGGTCTCCAGTGTCACCAGCCCA +
Preference number: 6 (lower is better)
Translates to: PLGRTYFHRAGF*LPMVVSSVTSP
Trigger: TGGGCTGGTGACACTGGAGACCACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTATGTGCGGCCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 72 bp CATAGGCCTGCAAGCTGTCATTGTATTGGCCACTTGTaGCCAGCTCCAGGAAGGCCCACCCAGTCTCGCGGA +
Preference number: 6 (lower is better)
Translates to: HRPASCHCIGHL*PAPGRPTQSRG
Trigger: TCCGCGAGACTGGGTGGGCCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATGACAGCTTGCAGGCCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS GCA 72 bp GAGCTCCTCCGACACAGCAGCCTCCACCACACCGGCTaGATAGGCCTGCAAGCTGTCATTGTATTGGCCACT +
Preference number: 6 (lower is better)
Translates to: ELLRHSSLHHTG*IGLQAVIVLAT
Trigger: AGTGGCCAATACAATGACAGCTTGCAGGCCTATGCAGCCGGTGTGGTGGAGGCTGCTGTGTCGGAGGAGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp CACACAGCCCCTGGGCCGCACATACTTCCACAGGGCTaGGTTCTTGTTGCCAATGGTGGTCTCCAGTGTCAC +
Preference number: 6 (lower is better)
Translates to: HTAPGPHILPQG*VLVANGGLQCH
Trigger: GTGACACTGGAGACCACCATTGGCAACAAGAACCCAGCCCTGTGGAAGTATGTGCGGCCCAGGGGCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 72 bp CTGCATAGGCCTGCAAGCTGTCATTGTATTGGCCACTaGTGCCCAGCTCCAGGAAGGCCCACCCAGTCTCGC +
Preference number: 6 (lower is better)
Translates to: LHRPASCHCIGH*CPAPGRPTQSR
Trigger: GCGAGACTGGGTGGGCCTTCCTGGAGCTGGGCACAAGTGGCCAATACAATGACAGCTTGCAGGCCTATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp AGGGCAGAACAGGAGCCAGAGCCCAGAGAAGGTTTGATCTTGGTCTaGTTCAGGGCCAGCTCCAGGTCTTCCAGGTCCCCAGAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: RAEQEPEPREGLILV*FRASSRSSRSPESC
Trigger: GCAGCTCTCTGGGGACCTGGAAGACCTGGAGCTGGCCCTGAACAAGACCAAGATCAAACCTTCTCTGGGCTCTGGCTCCTGTTCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp AGGTCGGAGCGGGCGGAGATAGCATTCTCCCCATTGGGCTGGGGGTaGCAGGCTTTGCACAGTGACAGAGGGTCATGGAGGAAGTCATTG +
Preference number: 6 (lower is better)
Translates to: RSERAEIAFSPLGWG*QALHSDRGSWRKSL
Trigger: CAATGACTTCCTCCATGACCCTCTGTCACTGTGCAAAGCCTGCAACCCCCAGCCCAATGGGGAGAATGCTATCTCCGCCCGCTCCGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 90 bp GGCGAAAGCAGCAGAGCAGGGACAGAACTTCAGTCCCATGAAACCTaGACAGGCGCGAACTTCCAGAGGTCTGGCTGGCCCATGTGCAGC +
Preference number: 6 (lower is better)
Translates to: GESSRAGTELQSHET*TGANFQRSGWPMCS
Trigger: GCTGCACATGGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCTGTCCCTGCTCTGCTGCTTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 72 bp GCAGAGCAGGGACAGAACTTCAGTCCCATGAAACCTTaGCAGGCGCGAACTTCCAGAGGTCTGGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: AEQGQNFSPMKP*QARTSRGLAGP
Trigger: TGGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCTGTCCCTGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp CACTGCCCAGGATGTAGAAGTCGTCGCAGGAGAAGATaGTGCCGGGGTAGGAGGAGAAGACCAGCTTGTTGC +
Preference number: 6 (lower is better)
Translates to: HCPGCRSRRRRR*CRGRRRRPACC
Trigger: GCAACAAGCTGGTCTTCTCCTCCTACCCCGGCACCATCTTCTCCTGCGACGACTTCTACATCCTGGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 72 bp CAGGAGCCAGAGCCCAGAGAAGGTTTGATCTTGGTCTaGTTCAGGGCCAGCTCCAGGTCTTCCAGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: QEPEPREGLILV*FRASSRSSRSP
Trigger: TGGGGACCTGGAAGACCTGGAGCTGGCCCTGAACAAGACCAAGATCAAACCTTCTCTGGGCTCTGGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 72 bp AGCAGAGCAGGGACAGAACTTCAGTCCCATGAAACCTaGACAGGCGCGAACTTCCAGAGGTCTGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SRAGTELQSHET*TGANFQRSGWP
Trigger: GGGCCAGCCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCTGTCCCTGCTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS TCA 72 bp CATACTGGGCCACTAGGGCCTGCAGCCCACTGGCATTaGACACAGTCTCGAAGGACGGTATGTTGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: HTGPLGPAAHWH*TQSRRTVCCSW
Trigger: CCAGCTACAACATACCGTCCTTCGAGACTGTGTTCAATGCCAGTGGGCTGCAGGCCCTAGTGGCCCAGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 72 bp GCAGAACAGGAGCCAGAGCCCAGAGAAGGTTTGATCTaGGTCTTGTTCAGGGCCAGCTCCAGGTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: AEQEPEPREGLI*VLFRASSRSSR
Trigger: CCTGGAAGACCTGGAGCTGGCCCTGAACAAGACCAAGATCAAACCTTCTCTGGGCTCTGGCTCCTGTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CAA 72 bp ATCCACTGGTTGTTATACGTGCCGCTGTTGAACCTCTaGAAGATGTCTGCCCAGGTGGCCCCATCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: IHWLLYVPLLNL*KMSAQVAPSEA
Trigger: GGCCTCGGATGGGGCCACCTGGGCAGACATCTTCAAGAGGTTCAACAGCGGCACGTATAACAACCAGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280800.5
CDS TCA 72 bp CGAAAGCAGCAGAGCAGGGACAGAACTTCAGTCCCATaGAACCTTGACAGGCGCGAACTTCCAGAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: RKQQSRDRTSVP*NLDRRELPEVW
Trigger: CCAGACCTCTGGAAGTTCGCGCCTGTCAAGGTTTCATGGGACTGAAGTTCTGTCCCTGCTCTGCTGCTTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280800.5
ENST00000545182.6
CDS CCA 72 bp GAACTCTTGGAATATCCCTGCAGTGACTCCGTGTGTTaGGAGGGTTTCCAAGGCCCAAACCTCCTAGGACCA +
Preference number: 6 (lower is better)
Translates to: ELLEYPCSDSVC*EGFQGPNLLGP
Trigger: TGGTCCTAGGAGGTTTGGGCCTTGGAAACCCTCCCAACACACGGAGTCACTGCAGGGATATTCCAAGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547163.1
CDS CAA 90 bp TTCCCCACCTCCTCACCAGCTCCTGGTCCCATCAAGTTTTTACATTaGGCCATGAAGGAGGTACTGCAAACATTTGGCAGTGGTATCCCT +
Preference number: 6 (lower is better)
Translates to: FPTSSPAPGPIKFLH*AMKEVLQTFGSGIP
Trigger: AGGGATACCACTGCCAAATGTTTGCAGTACCTCCTTCATGGCCAAATGTAAAAACTTGATGGGACCAGGAGCTGGTGAGGAGGTGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547163.1
CDS CAA 72 bp TCCTCACCAGCTCCTGGTCCCATCAAGTTTTTACATTaGGCCATGAAGGAGGTACTGCAAACATTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: SSPAPGPIKFLH*AMKEVLQTFGS
Trigger: ACTGCCAAATGTTTGCAGTACCTCCTTCATGGCCAAATGTAAAAACTTGATGGGACCAGGAGCTGGTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547163.1