Pregenerated sensors for PLBD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000121316Ensembl transcript IDs: ENST00000240617.10, ENST00000540572.1, ENST00000541618.1, ENST00000541800.6
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGAAAAGATGTCTGCCCACCTCTTGCCACTATCTGCCATCATATTaGCCACACGGACTCTTTGCCAGGACAGGAGAGTCTCGGGTATTA | + |
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Preference number: 1 (lower is better) Translates to: LKRCLPTSCHYLPSY*PHGLFARTGESRVL Trigger: TAATACCCGAGACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR TCA 90 bp | AGTGAGGGAATCAGATCCAATAGATCTCCAACACTATTCAGGAACTaGATCTGGAACAGGGTCATTGGCTTTGTCCCTTCTAATATAGCC | + |
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Preference number: 1 (lower is better) Translates to: SEGIRSNRSPTLFRN*IWNRVIGFVPSNIA Trigger: GGCTATATTAGAAGGGACAAAGCCAATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTGGAGATCTATTGGATCTGATTCCCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR TCA 90 bp | TGTTTATATATCCTGAGCATGGCTGCATACGTGTACCAGCTTGAGTaGGCAAAAAGGATGTTCTCAAATCCAGGAAGAACCTTGATAAGA | + |
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Preference number: 1 (lower is better) Translates to: CLYILSMAAYVYQLE*AKRMFSNPGRTLIR Trigger: TCTTATCAAGGTTCTTCCTGGATTTGAGAACATCCTTTTTGCTCACTCAAGCTGGTACACGTATGCAGCCATGCTCAGGATATATAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR CAA 90 bp | TTTGAAAAGATGTCTGCCCACCTCTTGCCACTATCTGCCATCATATaGGCCACACGGACTCTTTGCCAGGACAGGAGAGTCTCGGGTATT | + |
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Preference number: 2 (lower is better) Translates to: FEKMSAHLLPLSAII*ATRTLCQDRRVSGI Trigger: AATACCCGAGACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCACTATCTGCCATCATATTGGCCACACGGACTCTTTGCCAGGACAGGAGAGACTCCAAAAACCCTaGGTAACTGCTGAAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LATICHHIGHTDSLPGQERLQKP*VTAERE Trigger: CTCTCTTTCAGCAGTTACCCAGGGTTTTTGGAGTCT...CTCCTGTCCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR TCA 90 bp | AGACTCCAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCATACGTGTACCAGCTTaGGTGAGCAAAAAGGATGTT | + |
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Preference number: 2 (lower is better) Translates to: RLQKPWVTAEREATTAGIIRVPA*VSKKDV Trigger: AACATCCTTTTTGCTCACTCAAGCTGGTACACGTAT...GATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTGGAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR CAA 90 bp | CTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTATCTATGACGTaGAAGTCCCAGTGTTTATATATCCTGAGCATGGCTGCATACGTG | + |
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Preference number: 2 (lower is better) Translates to: LLKERRLLLVSLSMT*KSQCLYILSMAAYV Trigger: CACGTATGCAGCCATGCTCAGGATATATAAACACTGGGACTTCAACGTCATAGATAAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR CCA 90 bp | CAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTATCTTTCGTGATCAGCTGTaGGTAGAGGTTTGTGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: QKPWVTAEREATTAGIFIFRDQL*VEVCVV Trigger: CACTACACAAACCTCTACCCACAGCTGATCACGAAA...GATAAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCTGCATACGTGTACCAGCTTGAGTGAGCAAAAAGGATGTTCTCAAATCTTCTCCATAAAATCCTaGACTTTATCCATGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: AWLHTCTSLSEQKGCSQIFSIKS*TLSMME Trigger: TTCCATCATGGATAAAGTGCAGGATTTTATGGAGAA...GATTTGAGAACATCCTTTTTGCTCACTCAAGCTGGTACACGTATGCAGCCATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR CCA 72 bp | TGTCTGCCCACCTCTTGCCACTATCTGCCATCATATTaGCCACACGGACTCTTTGCCAGGACAGGAGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: CLPTSCHYLPSY*PHGLFARTGES Trigger: AGACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGGCAAGAGGTGGGCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR GCA 72 bp | CCACTATCTGCCATCATATTGGCCACACGGACTCTTTaGCAGGACAGGAGAGTCTCGGGTATTACCTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: PLSAIILATRTL*QDRRVSGITCF Trigger: AAAGCAGGTAATACCCGAGACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR CAA 90 bp | CTCCAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTTTAGGCTGCCGTTTTTaGTGGGAGAGAGTGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LQKPWVTAEREATTAGIFLGCRF*WERVRE Trigger: TTCCCTCACTCTCTCCCACAAAAAACGGCAGCCTAA...AAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR TCA 72 bp | ATCCTGAGCATGGCTGCATACGTGTACCAGCTTGAGTaGGCAAAAAGGATGTTCTCAAATCCAGGAAGAACC | + |
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Preference number: 3 (lower is better) Translates to: ILSMAAYVYQLE*AKRMFSNPGRT Trigger: GGTTCTTCCTGGATTTGAGAACATCCTTTTTGCTCACTCAAGCTGGTACACGTATGCAGCCATGCTCAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR CAA 90 bp | GAGTTGTATTTTGAAAAGATGTCTGCCCACCTCTTGCCACTATCTGCCATCATACCGGGTCCACTTATCTaGCTTCTCCATAAAATCCTG | + |
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Preference number: 3 (lower is better) Translates to: ELYFEKMSAHLLPLSAIIPGPLI*LLHKIL Trigger: CAGGATTTTATGGAGAAGCAAGATAAGTGGACCCGG...TATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAAAATACAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR CAA 90 bp | CAACACTATTCAGGAACTGAATCTGGAACAGGGTCATTGGCTTTGTCCCTTCTAATAGAGGCCATCTATTaGTGCCATCACATAGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: QHYSGTESGTGSLALSLLIEAIY*CHHIAC Trigger: ACAGGCTATGTGATGGCACAAATAGATGGCCTCTAT...TAGAAGGGACAAAGCCAATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR-3UTR CAA 90 bp | CCAGGAAGAACCTTGATAAGAGCGGAGCAATGTCCCATGTCCCATCTCTTAAAATCAGTCTTGTATTCTTaGATATTTTTCCGGGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: PGRTLIRAEQCPMSHLLKSVLYS*IFFRVH Trigger: GTGGACCCGGAAAAATATCAAAGAATACAAGACTGA...TTTTAAGAGATGGGACATGGGACATTGCTCCGCTCTTATCAAGGTTCTTCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR TCA 72 bp | ATCAGATCCAATAGATCTCCAACACTATTCAGGAACTaGATCTGGAACAGGGTCATTGGCTTTGTCCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: IRSNRSPTLFRN*IWNRVIGFVPS Trigger: AGAAGGGACAAAGCCAATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTGGAGATCTATTGGATCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR TCA 72 bp | CTGTATGTCTCCAAAATGAATCAGTCTTGTATTCTTTaGTATTTTTCCGGGTCCACTTATCTTGCTTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LYVSKMNQSCIL*YFSGSTYLASP Trigger: TGGAGAAGCAAGATAAGTGGACCCGGAAAAATATCAAAGAATACAAGACTGATTCATTTTGGAGACATACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR CAA 72 bp | ATGTCTGCCCACCTCTTGCCACTATCTGCCATCATATaGGCCACACGGACTCTTTGCCAGGACAGGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: MSAHLLPLSAII*ATRTLCQDRRV Trigger: GACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGGCAAGAGGTGGGCAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CCA 90 bp | TCCACTGCTAAGAATGTAAAAATCATCCAGAGACTCCAAAAACCCTGGGTAACTCAGCAGCAGAAGCGGTaGCGGCTGTGGCAGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: STAKNVKIIQRLQKPWVTQQQKR*RLWQPR Trigger: CCGGGGCTGCCACAGCCGCCACCGCTTCTGCTGCTG...AGTTACCCAGGGTTTTTGGAGTCTCTGGATGATTTTTACATTCTTAGCAGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR CAA 72 bp | GCCACTATCTGCCATCATATTGGCCACACGGACTCTTaGCCAGGACAGGAGAGTCTCGGGTATTACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ATICHHIGHTDS*PGQESLGYYLL Trigger: AAGCAGGTAATACCCGAGACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | TCCACTGCTAAGAATGTAAAAATCATCCAGAGACTCCAAAAACCCTGGGTAACTGCCACACGGACTCTTTaGCAGGACAGGAGAGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: STAKNVKIIQRLQKPWVTATRTL*QDRRVS Trigger: CGAGACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGC...AGTTACCCAGGGTTTTTGGAGTCTCTGGATGATTTTTACATTCTTAGCAGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | CAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTATCCCTCTTGCCACTATCTaGCATCATATTGGCCACACG | + |
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Preference number: 4 (lower is better) Translates to: QKPWVTAEREATTAGIFIPLATI*HHIGHT Trigger: CGTGTGGCCAATATGATGGCAGATAGTGGCAAGAGG...GATAAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CCA 90 bp | CTCCAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTAGACTCCAAAAACCCTaGGTAACTGCTGAAAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LQKPWVTAEREATTAGIFRLQKP*VTAERE Trigger: CTCTCTTTCAGCAGTTACCCAGGGTTTTTGGAGTCT...AAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | CAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTATCCGGGTCCACTTATCTTaGTTCTCCATAAAATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QKPWVTAEREATTAGIFIRVHLS*FSIKSC Trigger: GCAGGATTTTATGGAGAAGCAAGATAAGTGGACCCG...GATAAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | CAACACTATTCAGGAACTGAATCTGGAACAGGGTCATTGGCTTTGTCCCTTCTATGTCTGCCCACCTCTTaGCACTATCTGCCATCATAT | + |
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Preference number: 4 (lower is better) Translates to: QHYSGTESGTGSLALSLLCLPTS*HYLPSY Trigger: ATATGATGGCAGATAGTGGCAAGAGGTGGGCAGACA...TAGAAGGGACAAAGCCAATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CCA 90 bp | ATCCTGCACTTTATCCATGATGGAAGGTTTCGTGATCAGCTGTGGGTAGAGGTTTTTCGTGATCAGCTGTaGGTAGAGGTTTGTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: ILHFIHDGRFRDQLWVEVFRDQL*VEVCVV Trigger: CACTACACAAACCTCTACCCACAGCTGATCACGAAA...AACCTCTACCCACAGCTGATCACGAAACCTTCCATCATGGATAAAGTGCAGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR TCA 90 bp | ATCCTGCACTTTATCCATGATGGAAGGTTTCGTGATCAGCTGTGGGTAGAGGTTACACTATTCAGGAACTaGATCTGGAACAGGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: ILHFIHDGRFRDQLWVEVTLFRN*IWNRVI Trigger: AATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGT...AACCTCTACCCACAGCTGATCACGAAACCTTCCATCATGGATAAAGTGCAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR TCA 90 bp | CAACACTATTCAGGAACTGAATCTGGAACAGGGTCATTGGCTTTGTCCCTTCTAGTGTACCAGCTTGAGTaGGCAAAAAGGATGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QHYSGTESGTGSLALSLLVYQLE*AKRMFS Trigger: TGAGAACATCCTTTTTGCTCACTCAAGCTGGTACAC...TAGAAGGGACAAAGCCAATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR TCA 90 bp | CAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTATCAGTGTTTATATATCCTaGGCATGGCTGCATACGTGT | + |
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Preference number: 4 (lower is better) Translates to: QKPWVTAEREATTAGIFISVYIS*AWLHTC Trigger: ACACGTATGCAGCCATGCTCAGGATATATAAACACT...GATAAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | ATCCTGCACTTTATCCATGATGGAAGGTTTCGTGATCAGCTGTGGGTAGAGGTTACACTGTTTGTGGTCTaGAGCAATATCAATCCACTG | + |
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Preference number: 4 (lower is better) Translates to: ILHFIHDGRFRDQLWVEVTLFVV*SNINPL Trigger: CAGTGGATTGATATTGCTGCAGACCACAAACAGTGT...AACCTCTACCCACAGCTGATCACGAAACCTTCCATCATGGATAAAGTGCAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| 3UTR CAA 72 bp | GAGAGGCGACTACTGCTGGTATCTTTATCTATGACGTaGAAGTCCCAGTGTTTATATATCCTGAGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: ERRLLLVSLSMT*KSQCLYILSMA Trigger: AGCCATGCTCAGGATATATAAACACTGGGACTTCAACGTCATAGATAAAGATACCAGCAGTAGTCGCCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR TCA 90 bp | CCAGGAAGAACCTTGATAAGAGCGGAGCAATGTCCCATGTCCCATCTCTTAAAACAGTCTTGTATTCTTTaGTATTTTTCCGGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: PGRTLIRAEQCPMSHLLKQSCIL*YFSGST Trigger: AGTGGACCCGGAAAAATATCAAAGAATACAAGACTG...TTTTAAGAGATGGGACATGGGACATTGCTCCGCTCTTATCAAGGTTCTTCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | GAGTTGTATTTTGAAAAGATGTCTGCCCACCTCTTGCCACTATCTGCCATCATATATAGCCCTCTTCTTTaGTCCTACATAGAGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: ELYFEKMSAHLLPLSAIIYSPLL*SYIEAI Trigger: GATGGCCTCTATGTAGGAGCAAAGAAGAGGGCTATA...TATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAAAATACAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CCA 90 bp | AGGCGACTACTGCTGGTATCTTTATCTATGACGTTGAAGTCCCAGTGTTTATATTATCTGCCATCATATTaGCCACACGGACTCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RRLLLVSLSMTLKSQCLYYLPSY*PHGLFA Trigger: GGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATA...ATATAAACACTGGGACTTCAACGTCATAGATAAAGATACCAGCAGTAGTCGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR TCA 90 bp | TATGACGTTGAAGTCCCAGTGTTTATATATCCTGAGCATGGCTGCATACGTGTAATACGTGTACCAGCTTaGGTGAGCAAAAAGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: YDVEVPVFIYPEHGCIRVIRVPA*VSKKDV Trigger: AACATCCTTTTTGCTCACTCAAGCTGGTACACGTAT...TACACGTATGCAGCCATGCTCAGGATATATAAACACTGGGACTTCAACGTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | TTTGTGGGAGAGAGTGAGGGAATCAGATCCAATAGATCTCCAACACTATTCAGGGTCTCGGGTATTACCTaGTTTAGCAGGGTTTTATTA | + |
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Preference number: 4 (lower is better) Translates to: FVGESEGIRSNRSPTLFRVSGIT*FSRVLL Trigger: TAATAAAACCCTGCTAAAGCAGGTAATACCCGAGAC...CCTGAATAGTGTTGGAGATCTATTGGATCTGATTCCCTCACTCTCTCCCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR GCA 90 bp | ATCCTGCACTTTATCCATGATGGAAGGTTTCGTGATCAGCTGTGGGTAGAGGTTTTCTCCATAAAATCCTaGACTTTATCCATGATGGAA | + |
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Preference number: 4 (lower is better) Translates to: ILHFIHDGRFRDQLWVEVFSIKS*TLSMME Trigger: TTCCATCATGGATAAAGTGCAGGATTTTATGGAGAA...AACCTCTACCCACAGCTGATCACGAAACCTTCCATCATGGATAAAGTGCAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS GCA 90 bp | GCCCGGACCGCCGCGGGTCATCGCTCCACGGCCGCGACCTTCCTCTaGGGGATCAGGCGGCCGCGGTGGCCCGCGGTGGCAGAAGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: ARTAAGHRSTAATFL*GIRRPRWPAVAEVA Trigger: TGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGGAAGGTCGCGGCCGTGGAGCGATGACCCGCGGCGGTCCGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS GCA 90 bp | CCTCTGCGGGATCAGGCGGCCGCGGTGGCCCGCGGTGGCAGAAGTTaGAAGAGAGGCTCCTGGCCTACTCAGGGGCGCCGCCTCTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: PLRDQAAAVARGGRS*KRGSWPTQGRRLSE Trigger: CTCGGAGAGGCGGCGCCCCTGAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 90 bp | GCGGCCGCGGTGGCCCGCGGTGGCAGAAGTTGCAAGAGAGGCTCCTaGCCTACTCAGGGGCGCCGCCTCTCCGAGGTGGGGCGTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: AAAVARGGRSCKRGS*PTQGRRLSEVGRPQ Trigger: TTGAGGACGCCCCACCTCGGAGAGGCGGCGCCCCTGAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 90 bp | CCGCGACCTTCCTCTGCGGGATCAGGCGGCCGCGGTGGCCCGCGGTaGCAGAAGTTGCAAGAGAGGCTCCTGGCCTACTCAGGGGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: PRPSSAGSGGRGGPR*QKLQERLLAYSGAP Trigger: CGGCGCCCCTGAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGGAAGGTCGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 90 bp | CGCTCCACGGCCGCGACCTTCCTCTGCGGGATCAGGCGGCCGCGGTaGCCCGCGGTGGCAGAAGTTGCAAGAGAGGCTCCTGGCCTACTC | + |
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Preference number: 5 (lower is better) Translates to: RSTAATFLCGIRRPR*PAVAEVAREAPGLL Trigger: GAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGGAAGGTCGCGGCCGTGGAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS TCA 90 bp | ATGCAGTTGCATAGTAGACTCCTGCAGGTTTCGGCGGCTCCGCGGTaGCTAACAACAGCGGCAGCAGCAGCAGCAGCAGCAGAAGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: MQLHSRLLQVSAAPR*LTTAAAAAAAAEAV Trigger: CACCGCTTCTGCTGCTGCTGCTGCTGCTGCCGCTGTTGTTAGTCACCGCGGAGCCGCCGAAACCTGCAGGAGTCTACTATGCAACTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGAACCTTGATAAGAGCGGAGCAATGTCCCATGTCCCATCTCTTAAAAGGCCACACGGACTCTTaGCCAGGACAGGAGAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: PGRTLIRAEQCPMSHLLKGHTDS*PGQESL Trigger: GAGACTCTCCTGTCCTGGCAAAGAGTCCGTGTGGCC...TTTTAAGAGATGGGACATGGGACATTGCTCCGCTCTTATCAAGGTTCTTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS CCA 90 bp | CCCAGCGAAAAACAGGGAGGCCACCTTGTACTGTGGGACCACTTATaGCATAGGATGTGTACTGAGATGCTAGGTAGATATCTGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: PSEKQGGHLVLWDHL*HRMCTEMLGRYLPP Trigger: AGGTGGCAGATATCTACCTAGCATCTCAGTACACATCCTATGCCATAAGTGGTCCCACAGTACAAGGTGGCCTCCCTGTTTTTCGCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS TCA 90 bp | AATCAAAGTTGTAGACCTCTGGCATGCCCTGATGTAGAGTTTTGTTaGAACGGTCCCAGCGAAAAACAGGGAGGCCACCTTGTACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: NQSCRPLACPDVEFC*NGPSEKQGGHLVLW Trigger: CCACAGTACAAGGTGGCCTCCCTGTTTTTCGCTGGGACCGTTTCAACAAAACTCTACATCAGGGCATGCCAGAGGTCTACAACTTTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 90 bp | TGGATGCCGTATCAGTCACTTTCCCTTGGTCACGCCGGAAAATTTTaGCTCGTGGAGCTAAATCATAAGAGTAGTCCAAGCCCAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: WMPYQSLSLGHAGKF*LVELNHKSSPSPAS Trigger: AGAAGCTGGGCTTGGACTACTCTTATGATTTAGCTCCACGAGCCAAAATTTTCCGGCGTGACCAAGGGAAAGTGACTGATACGGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS GCA 90 bp | TATAGGTGCCAGAGTTGTATTTTGAAAAGATGTCTGCCCACCTCTTaGCACTATCTGCCATCATATTGGCCACACGGACTCTTTGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: YRCQSCILKRCLPTS*HYLPSYWPHGLFAR Trigger: CCTGGCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAAAATACAACTCTGGCACCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000541800.6 |
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| CDS CCA 90 bp | AAAATCCTGCACTTTATCCATGATGGAAGGTTTCGTGATCAGCTGTaGGTAGAGGTTTGTGTAGTGGTCATTCATGTGTGGGGCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: KILHFIHDGRFRDQL*VEVCVVVIHVWGSE Trigger: CTCACTGCCCCACACATGAATGACCACTACACAAACCTCTACCCACAGCTGATCACGAAACCTTCCATCATGGATAAAGTGCAGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000540572.1 |
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| CDS-3UTR CAA 90 bp | CCAGGAAGAACCTTGATAAGAGCGGAGCAATGTCCCATGTCCCATCTCTTAAAAGCTGTGGGTAGAGGTTaGTGTAGTGGTCATTCATGT | + |
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Preference number: 5 (lower is better) Translates to: PGRTLIRAEQCPMSHLLKAVGRG*CSGHSC Trigger: ACATGAATGACCACTACACAAACCTCTACCCACAGC...TTTTAAGAGATGGGACATGGGACATTGCTCCGCTCTTATCAAGGTTCTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CAA 90 bp | CAAAAACCCTGGGTAACTGCTGAAAGAGAGGCGACTACTGCTGGTATCTTTATCATAGAGGCCATCTATTaGTGCCATCACATAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: QKPWVTAEREATTAGIFIIEAIY*CHHIAC Trigger: ACAGGCTATGTGATGGCACAAATAGATGGCCTCTAT...GATAAAGATACCAGCAGTAGTCGCCTCTCTTTCAGCAGTTACCCAGGGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CAA 90 bp | GATCCAATAGATCTCCAACACTATTCAGGAACTGAATCTGGAACAGGGTCATTGTTAGGCTGCCGTTTTTaGTGGGAGAGAGTGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: DPIDLQHYSGTESGTGSLLGCRF*WERVRE Trigger: TTCCCTCACTCTCTCCCACAAAAAACGGCAGCCTAA...CAATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTGGAGATCTATTGGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CAA 90 bp | GAGTTGTATTTTGAAAAGATGTCTGCCCACCTCTTGCCACTATCTGCCATCATACTATCTGCCATCATATaGGCCACACGGACTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: ELYFEKMSAHLLPLSAIILSAII*ATRTLC Trigger: GCAAAGAGTCCGTGTGGCCAATATGATGGCAGATAG...TATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAAAATACAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CAA 90 bp | TATGACGTTGAAGTCCCAGTGTTTATATATCCTGAGCATGGCTGCATACGTGTAATGTCTGCCCACCTCTaGCCACTATCTGCCATCATA | + |
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Preference number: 5 (lower is better) Translates to: YDVEVPVFIYPEHGCIRVMSAHL*PLSAII Trigger: TATGATGGCAGATAGTGGCAAGAGGTGGGCAGACAT...TACACGTATGCAGCCATGCTCAGGATATATAAACACTGGGACTTCAACGTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS TCA 90 bp | TGTTTATATATCCTGAGCATGGCTGCATACGTGTACCAGCTTGAGTaGGCAAAAAGGATGTTCTCAAATCCAGGAAGAACCTACAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: CLYILSMAAYVYQLE*AKRMFSNPGRTYSQ Trigger: CTGGCTGTAGGTTCTTCCTGGATTTGAGAACATCCTTTTTGCTCACTCAAGCTGGTACACGTATGCAGCCATGCTCAGGATATATAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541800.6 |
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| CDS TCA 90 bp | CCAGTGTTTATATATCCTGAGCATGGCTGCATACGTGTACCAGCTTaGGTGAGCAAAAAGGATGTTCTCAAATCCAGGAAGAACCTACAG | + |
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Preference number: 5 (lower is better) Translates to: PVFIYPEHGCIRVPA*VSKKDVLKSRKNLQ Trigger: CTGTAGGTTCTTCCTGGATTTGAGAACATCCTTTTTGCTCACTCAAGCTGGTACACGTATGCAGCCATGCTCAGGATATATAAACACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541800.6 |
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| CDS-3UTR CAA 90 bp | AGGCGACTACTGCTGGTATCTTTATCTATGACGTTGAAGTCCCAGTGTTTATATCCGGGTCCACTTATCTaGCTTCTCCATAAAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: RRLLLVSLSMTLKSQCLYPGPLI*LLHKIL Trigger: CAGGATTTTATGGAGAAGCAAGATAAGTGGACCCGG...ATATAAACACTGGGACTTCAACGTCATAGATAAAGATACCAGCAGTAGTCGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CAA 90 bp | GAGTTGTATTTTGAAAAGATGTCTGCCCACCTCTTGCCACTATCTGCCATCATAAATCCAGGAAGAACCTaGATAAGAGCGGAGCAATGT | + |
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Preference number: 5 (lower is better) Translates to: ELYFEKMSAHLLPLSAIINPGRT*IRAEQC Trigger: ACATTGCTCCGCTCTTATCAAGGTTCTTCCTGGATT...TATGATGGCAGATAGTGGCAAGAGGTGGGCAGACATCTTTTCAAAATACAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CAA 90 bp | TCCACTGCTAAGAATGTAAAAATCATCCAGAGACTCCAAAAACCCTGGGTAACTTCTGGAACAGGGTCATaGGCTTTGTCCCTTCTAATA | + |
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Preference number: 5 (lower is better) Translates to: STAKNVKIIQRLQKPWVTSGTGS*ALSLLI Trigger: TATTAGAAGGGACAAAGCCAATGACCCTGTTCCAGA...AGTTACCCAGGGTTTTTGGAGTCTCTGGATGATTTTTACATTCTTAGCAGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS-3UTR CAA 90 bp | GGTATCTTTATCTATGACGTTGAAGTCCCAGTGTTTATATATCCTGAGCATGGCCATACGTGTACCAGCTaGAGTGAGCAAAAAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GIFIYDVEVPVFIYPEHGHTCTS*SEQKGC Trigger: ACATCCTTTTTGCTCACTCAAGCTGGTACACGTATG...GCCATGCTCAGGATATATAAACACTGGGACTTCAACGTCATAGATAAAGATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS GCA 90 bp | AGGATCCTTCTTATAATTGTTGTATCGCATGATATATTTCATGGATaGCGTATCAGTCACTTTCCCTTGGTCACGCCGGAAAATTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RILLIIVVSHDIFHG*RISHFPLVTPENFG Trigger: GCCAAAATTTTCCGGCGTGACCAAGGGAAAGTGACTGATACGGCATCCATGAAATATATCATGCGATACAACAATTATAAGAAGGATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS-3UTR CAA 90 bp | GATCCAATAGATCTCCAACACTATTCAGGAACTGAATCTGGAACAGGGTCATTGTCAGTCTTGTATTCTTaGATATTTTTCCGGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DPIDLQHYSGTESGTGSLSVLYS*IFFRVH Trigger: GTGGACCCGGAAAAATATCAAAGAATACAAGACTGA...CAATGACCCTGTTCCAGATTCAGTTCCTGAATAGTGTTGGAGATCTATTGGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS GCA 90 bp | CGTAGAACATCAGTTTGTTCAGAATATTCTACATATGTAGGAATTTaGTCCACAATGTACAGAGTGCCTTTGTCAAGACTGTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRTSVCSEYSTYVGI*STMYRVPLSRLWFS Trigger: GCTGAACCACAGTCTTGACAAAGGCACTCTGTACATTGTGGAGCAAATTCCTACATATGTAGAATATTCTGAACAAACTGATGTTCTACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000541800.6 |
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| CDS TCA 90 bp | GCATACAGGGATTGTGCCATTTCAGGTAAGTGTTTATTGCTATACTaGTTATTGGAAAATATGGCCAAGGAGTCAAGATTAACCTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: AYRDCAISGKCLLLY*LLENMAKESRLTFN Trigger: ATTAAAGGTTAATCTTGACTCCTTGGCCATATTTTCCAATAATCAGTATAGCAATAAACACTTACCTGAAATGGCACAATCCCTGTATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541800.6 |
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| CDS GCA 72 bp | GCCGCGGGTCATCGCTCCACGGCCGCGACCTTCCTCTaGGGGATCAGGCGGCCGCGGTGGCCCGCGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: AAGHRSTAATFL*GIRRPRWPAVA Trigger: TGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGGAAGGTCGCGGCCGTGGAGCGATGACCCGCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 72 bp | CAACAGCGGCAGCAGCAGCAGCAGCAGCAGAAGCGGTaGCGGCTGTGGCAGCCCCGGGCGCCCGCCCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: QQRQQQQQQQKR*RLWQPRAPART Trigger: GGTCCGGGCGGGCGCCCGGGGCTGCCACAGCCGCCACCGCTTCTGCTGCTGCTGCTGCTGCTGCCGCTGTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000541618.1 |
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| CDS GCA 72 bp | GATCAGGCGGCCGCGGTGGCCCGCGGTGGCAGAAGTTaGAAGAGAGGCTCCTGGCCTACTCAGGGGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: DQAAAVARGGRS*KRGSWPTQGRR Trigger: GCGGCGCCCCTGAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CAA 72 bp | GGATCAGGCGGCCGCGGTGGCCCGCGGTGGCAGAAGTaGCAAGAGAGGCTCCTGGCCTACTCAGGGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GSGGRGGPRWQK*QERLLAYSGAP Trigger: CGGCGCCCCTGAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CAA 90 bp | TCCTCTGCGGGATCAGGCGGCCGCGGTGGCCCGCGGTGGCAGAAGTaGCAAGAGAGGCTCCTGGCCTACTCAGGGGCGCCGCCTCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SSAGSGGRGGPRWQK*QERLLAYSGAPPLR Trigger: TCGGAGAGGCGGCGCCCCTGAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 72 bp | GCCGCGACCTTCCTCTGCGGGATCAGGCGGCCGCGGTaGCCCGCGGTGGCAGAAGTTGCAAGAGAGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AATFLCGIRRPR*PAVAEVAREAP Trigger: AGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGGAAGGTCGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 72 bp | TCCTCTGCGGGATCAGGCGGCCGCGGTGGCCCGCGGTaGCAGAAGTTGCAAGAGAGGCTCCTGGCCTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSAGSGGRGGPR*QKLQERLLAYS Trigger: TGAGTAGGCCAGGAGCCTCTCTTGCAACTTCTGCCACCGCGGGCCACCGCGGCCGCCTGATCCCGCAGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS TCA 72 bp | CATAGTAGACTCCTGCAGGTTTCGGCGGCTCCGCGGTaGCTAACAACAGCGGCAGCAGCAGCAGCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HSRLLQVSAAPR*LTTAAAAAAAA Trigger: TGCTGCTGCTGCTGCTGCTGCCGCTGTTGTTAGTCACCGCGGAGCCGCCGAAACCTGCAGGAGTCTACTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS TCA 72 bp | TCATTCATGTGTCTGCAGGTTTCGGCGGCTCCGCGGTaGCTAACAACAGCGGCAGCAGCAGCAGCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFMCLQVSAAPR*LTTAAAAAAAA Trigger: TGCTGCTGCTGCTGCTGCTGCCGCTGTTGTTAGTCACCGCGGAGCCGCCGAAACCTGCAGACACATGAATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541618.1 |
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| CDS TCA 72 bp | TCTCATTGCTCAGGGTTTGAGAGCCATAGCCAGCTCTaGTCTCCAGGATGCCCCAGCCTGTGGTTTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SHCSGFESHSQL*SPGCPSLWFSQ Trigger: CTGTGAAAACCACAGGCTGGGGCATCCTGGAGATCAGAGCTGGCTATGGCTCTCAAACCCTGAGCAATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000540572.1 |
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| CDS GCA 72 bp | TTGTACTGTCTTTTCAGCAGGCATCCAGTATGCAGTTaGATAGTAGACTCCTGCAGGTTTCGGCGGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LYCLFSRHPVCS*IVDSCRFRRLR Trigger: GCGGAGCCGCCGAAACCTGCAGGAGTCTACTATGCAACTGCATACTGGATGCCTGCTGAAAAGACAGTACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 72 bp | GGTCCCAGCGAAAAACAGGGAGGCCACCTTGTACTGTaGGACCACTTATGGCATAGGATGTGTACTGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GPSEKQGGHLVL*DHLWHRMCTEM Trigger: CATCTCAGTACACATCCTATGCCATAAGTGGTCCCACAGTACAAGGTGGCCTCCCTGTTTTTCGCTGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CAA 72 bp | CTTGTACTGTCTTTTCAGCAGGCATCCAGTATGCAGTaGCATAGTAGACTCCTGCAGGTTTCGGCGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVLSFQQASSMQ*HSRLLQVSAAP Trigger: CGGAGCCGCCGAAACCTGCAGGAGTCTACTATGCAACTGCATACTGGATGCCTGCTGAAAAGACAGTACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS TCA 72 bp | TGTAGACCTCTGGCATGCCCTGATGTAGAGTTTTGTTaGAACGGTCCCAGCGAAAAACAGGGAGGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: CRPLACPDVEFC*NGPSEKQGGHL Trigger: AAGGTGGCCTCCCTGTTTTTCGCTGGGACCGTTTCAACAAAACTCTACATCAGGGCATGCCAGAGGTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS GCA 72 bp | GTTGATAATTTTGTGGGTCCGTCCCTACACAATCCCTaGACTCATCACGCCCATCTCTCCATTCTGGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VDNFVGPSLHNP*THHAHLSILVH Trigger: GTGAACCAGAATGGAGAGATGGGCGTGATGAGTGCAGGGATTGTGTAGGGACGGACCCACAAAATTATCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540572.1 |
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| CDS TCA 72 bp | CTTTGTGTCATAACAACCTCCAGGACTTGGGTTAGGTaGGTTCAGGTCCTCACGGCAGCAGATGGTATTACA | + |
|
Preference number: 6 (lower is better) Translates to: LCVITTSRTWVR*VQVLTAADGIT Trigger: TGTAATACCATCTGCTGCCGTGAGGACCTGAACTCACCTAACCCAAGTCCTGGAGGTTGTTATGACACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS GCA 72 bp | TTTGACTTGTACTGTCTTTTCAGCAGGCATCCAGTATaGAGTTGCATAGTAGACTCCTGCAGGTTTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FDLYCLFSRHPV*SCIVDSCRFRR Trigger: CCGCCGAAACCTGCAGGAGTCTACTATGCAACTGCATACTGGATGCCTGCTGAAAAGACAGTACAAGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 72 bp | AAACAGGGAGGCCACCTTGTACTGTGGGACCACTTATaGCATAGGATGTGTACTGAGATGCTAGGTAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: KQGGHLVLWDHL*HRMCTEMLGRY Trigger: ATATCTACCTAGCATCTCAGTACACATCCTATGCCATAAGTGGTCCCACAGTACAAGGTGGCCTCCCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS GCA 72 bp | TTTGACTTGTACTGTCTTTTCAGCAGGCATCCAGTATaGAGTTGCATAGTAGACTCCTGTGACTCCGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: FDLYCLFSRHPV*SCIVDSCDSVW Trigger: CCATACGGAGTCACAGGAGTCTACTATGCAACTGCATACTGGATGCCTGCTGAAAAGACAGTACAAGTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540572.1 |
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| CDS CCA 72 bp | TATCAGTCACTTTCCCTTGGTCACGCCGGAAAATTTTaGCTCGTGGAGCTAAATCATAAGAGTAGTCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: YQSLSLGHAGKF*LVELNHKSSPS Trigger: GCTTGGACTACTCTTATGATTTAGCTCCACGAGCCAAAATTTTCCGGCGTGACCAAGGGAAAGTGACTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CCA 72 bp | ATATATTTCATGGATGCCGTATCAGTCACTTTCCCTTaGTCACGCCGGAAAATTTTGGCTCGTGGAGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: IYFMDAVSVTFP*SRRKILARGAK Trigger: TTTAGCTCCACGAGCCAAAATTTTCCGGCGTGACCAAGGGAAAGTGACTGATACGGCATCCATGAAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CAA 72 bp | TATGTAGGAATTTGCTCCACAATGTACAGAGTGCCTTaGTCAAGACTGTGGTTCAGCTTTACTTTCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YVGICSTMYRVP*SRLWFSFTFFR Trigger: CCTGAAGAAAGTAAAGCTGAACCACAGTCTTGACAAAGGCACTCTGTACATTGTGGAGCAAATTCCTACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000541800.6 |
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| CDS CAA 90 bp | TATTCTACATATGTAGGAATTTGCTCCACAATGTACAGAGTGCCTTaGTCAAGACTGTGGTTCAGCTTTACTTTCTTCAGGTCCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: YSTYVGICSTMYRVP*SRLWFSFTFFRSRT Trigger: GGTTCTGGACCTGAAGAAAGTAAAGCTGAACCACAGTCTTGACAAAGGCACTCTGTACATTGTGGAGCAAATTCCTACATATGTAGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000541800.6 |
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| CDS GCA 72 bp | TCAGTTTGTTCAGAATATTCTACATATGTAGGAATTTaGTCCACAATGTACAGAGTGCCTTTGTCAAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: SVCSEYSTYVGI*STMYRVPLSRL Trigger: CAGTCTTGACAAAGGCACTCTGTACATTGTGGAGCAAATTCCTACATATGTAGAATATTCTGAACAAACTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000541800.6 |
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| CDS CAA 90 bp | TTATTGCATAATTCTGATGGGAAAAACATAGCTAAAATAGTGCCTTaGGTATCTTATTTACAGTCTTCTAGTCCGTCATCTCCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHNSDGKNIAKIVP*VSYLQSSSPSSPSF Trigger: GAAGGAGGGAGATGACGGACTAGAAGACTGTAAATAAGATACCAAAGGCACTATTTTAGCTATGTTTTTCCCATCAGAATTATGCAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS TCA 72 bp | TACTGTAAGGATCCTTCTTATAATTGTTGTATCGCATaGTATATTTCATGGATGCCGTATCAGTCACTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: YCKDPSYNCCIA*YISWMPYQSLS Trigger: GGAAAGTGACTGATACGGCATCCATGAAATATATCATGCGATACAACAATTATAAGAAGGATCCTTACAGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000240617.10 |
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| CDS CAA 72 bp | ATCAGTTTGTTCAGAATATTCTACATATGTAGGAATTaGCTCCACAATGTACAGAGTGCCTTTGTCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: ISLFRIFYICRN*LHNVQSAFVKT Trigger: AGTCTTGACAAAGGCACTCTGTACATTGTGGAGCAAATTCCTACATATGTAGAATATTCTGAACAAACTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240617.10 ENST00000541800.6 |
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| CDS TCA 72 bp | GATTGTGCCATTTCAGGTAAGTGTTTATTGCTATACTaGTTATTGGAAAATATGGCCAAGGAGTCAAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: DCAISGKCLLLY*LLENMAKESRL Trigger: TAATCTTGACTCCTTGGCCATATTTTCCAATAATCAGTATAGCAATAAACACTTACCTGAAATGGCACAATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541800.6 |
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